Classifications

• • C—CHEMISTRY; METALLURGY
  • C07—ORGANIC CHEMISTRY
  • C07D—HETEROCYCLIC COMPOUNDS
  • C07D413/00—Heterocyclic compounds containing two or more hetero rings, at least one ring having nitrogen and oxygen atoms as the only ring hetero atoms
  • C07D413/14—Heterocyclic compounds containing two or more hetero rings, at least one ring having nitrogen and oxygen atoms as the only ring hetero atoms containing three or more hetero rings
• • C—CHEMISTRY; METALLURGY
  • C07—ORGANIC CHEMISTRY
  • C07D—HETEROCYCLIC COMPOUNDS
  • C07D471/00—Heterocyclic compounds containing nitrogen atoms as the only ring hetero atoms in the condensed system, at least one ring being a six-membered ring with one nitrogen atom, not provided for by groups C07D451/00 - C07D463/00
  • C07D471/02—Heterocyclic compounds containing nitrogen atoms as the only ring hetero atoms in the condensed system, at least one ring being a six-membered ring with one nitrogen atom, not provided for by groups C07D451/00 - C07D463/00 in which the condensed system contains two hetero rings
  • C07D471/04—Ortho-condensed systems
• • A—HUMAN NECESSITIES
  • A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
  • A61K—PREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
  • A61K31/00—Medicinal preparations containing organic active ingredients
  • A61K31/33—Heterocyclic compounds
  • A61K31/395—Heterocyclic compounds having nitrogen as a ring hetero atom, e.g. guanethidine or rifamycins
  • A61K31/435—Heterocyclic compounds having nitrogen as a ring hetero atom, e.g. guanethidine or rifamycins having six-membered rings with one nitrogen as the only ring hetero atom
  • A61K31/4353—Heterocyclic compounds having nitrogen as a ring hetero atom, e.g. guanethidine or rifamycins having six-membered rings with one nitrogen as the only ring hetero atom ortho- or peri-condensed with heterocyclic ring systems
  • A61K31/437—Heterocyclic compounds having nitrogen as a ring hetero atom, e.g. guanethidine or rifamycins having six-membered rings with one nitrogen as the only ring hetero atom ortho- or peri-condensed with heterocyclic ring systems the heterocyclic ring system containing a five-membered ring having nitrogen as a ring hetero atom, e.g. indolizine, beta-carboline
• • A—HUMAN NECESSITIES
  • A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
  • A61K—PREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
  • A61K31/00—Medicinal preparations containing organic active ingredients
  • A61K31/33—Heterocyclic compounds
  • A61K31/395—Heterocyclic compounds having nitrogen as a ring hetero atom, e.g. guanethidine or rifamycins
  • A61K31/495—Heterocyclic compounds having nitrogen as a ring hetero atom, e.g. guanethidine or rifamycins having six-membered rings with two or more nitrogen atoms as the only ring heteroatoms, e.g. piperazine or tetrazines
  • A61K31/505—Pyrimidines; Hydrogenated pyrimidines, e.g. trimethoprim
  • A61K31/519—Pyrimidines; Hydrogenated pyrimidines, e.g. trimethoprim ortho- or peri-condensed with heterocyclic rings
• • A—HUMAN NECESSITIES
  • A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
  • A61P—SPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
  • A61P25/00—Drugs for disorders of the nervous system
  • A61P25/28—Drugs for disorders of the nervous system for treating neurodegenerative disorders of the central nervous system, e.g. nootropic agents, cognition enhancers, drugs for treating Alzheimer's disease or other forms of dementia
• • A—HUMAN NECESSITIES
  • A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
  • A61P—SPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
  • A61P29/00—Non-central analgesic, antipyretic or antiinflammatory agents, e.g. antirheumatic agents; Non-steroidal antiinflammatory drugs [NSAID]
• • A—HUMAN NECESSITIES
  • A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
  • A61P—SPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
  • A61P31/00—Antiinfectives, i.e. antibiotics, antiseptics, chemotherapeutics
• • A—HUMAN NECESSITIES
  • A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
  • A61P—SPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
  • A61P33/00—Antiparasitic agents
• • A—HUMAN NECESSITIES
  • A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
  • A61P—SPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
  • A61P35/00—Antineoplastic agents
• • A—HUMAN NECESSITIES
  • A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
  • A61P—SPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
  • A61P35/00—Antineoplastic agents
  • A61P35/02—Antineoplastic agents specific for leukemia
• • A—HUMAN NECESSITIES
  • A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
  • A61P—SPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
  • A61P35/00—Antineoplastic agents
  • A61P35/04—Antineoplastic agents specific for metastasis
• • A—HUMAN NECESSITIES
  • A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
  • A61P—SPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
  • A61P37/00—Drugs for immunological or allergic disorders
• • A—HUMAN NECESSITIES
  • A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
  • A61P—SPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
  • A61P37/00—Drugs for immunological or allergic disorders
  • A61P37/02—Immunomodulators
  • A61P37/04—Immunostimulants

Definitions

• the present application is concerned with pharmaceutically active compounds.
• the disclosure provides compounds as well as their compositions and methods of use.
• the compounds modulate PD-1/PD-L1 protein/protein interaction and are useful in the treatment of various diseases including infectious diseases and cancer.
• the immune system plays an important role in controlling and eradicating diseases such as cancer.
• cancer cells often develop strategies to evade or to suppress the immune system in order to favor their growth.
• One such mechanism is altering the expression of costimulatory and co-inhibitory molecules expressed on immune cells (Postow et al, J. Clinical Oncology 2015, 1-9). Blocking the signaling of an inhibitory immune checkpoint, such as PD-1, has proven to be a promising and effective treatment modality.
• PD-1 Programmed cell death-1
• CD279 is a cell surface receptor expressed on activated T cells, natural killer T cells, B cells, and macrophages (Greenwald et al, Annu. Rev. Immunol 2005, 23:515-548; Okazaki and Honjo, Trends Immunol 2006, (4): 195- 201). It functions as an intrinsic negative feedback system to prevent the activation of T-cells, which in turn reduces autoimmunity and promotes self-tolerance.
• PD-1 is also known to play a critical role in the suppression of antigen-specific T cell response in diseases like cancer and viral infection (Sharpe et al, Nat Immunol 2007 8, 239-245; Postow et al, J. Clinical Oncol 2015, 1-9).
• the structure of PD-1 consists of an extracellular immunoglobulin variable-like domain followed by a transmembrane region and an intracellular domain (Parry et al, Mol Cell Biol 2005, 9543-9553).
• the intracellular domain contains two phosphorylation sites located in an immunoreceptor tyrosine-based inhibitory motif and an immunoreceptor tyrosine-based switch motif, which suggests that PD-l negatively regulates T cell receptor-mediated signals.
• PD-l has two ligands, PD-L1 and PD-L2 (Parry et al, Mol Cell Biol 2005, 9543-9553; Latchman et al, Nat Immunol 2001, 2, 261-268), and they differ in their expression patterns.
• PD-L1 protein is upregulated on macrophages and dendritic cells in response to lipopolysaccharide and GM-CSF treatment, and on T cells and B cells upon T cell receptor and B cell receptor signaling. PD-L1 is also highly expressed on almost all tumor cells, and the expression is further increased after IFN- g treatment (Iwai et al, PNAS2002, 99(l9):l2293-7; Blank et al, Cancer Res 2004, 64(3):l 140- 5).
• tumor PD-L1 expression status has been shown to be prognostic in multiple tumor types (Wang et al, Eur J Surg Oncol 2015; Huang et al, Oncol Rep 2015; Sabatier et al, Oncotarget 2015, 6(7): 5449-5464).
• PD-L2 expression in contrast, is more restricted and is expressed mainly by dendritic cells (Nakae et al, J Immunol 2006, 177:566-73).
• Ligation of PD- 1 with its ligands PD-L1 and PD-L2 on T cells delivers a signal that inhibits IL-2 and IFN-g production, as well as cell proliferation induced upon T cell receptor activation (Carter et al, Eur J Immunol 2002, 32(3):634-43; Freeman et al, J Exp Med 2000, 192(7):1027-34).
• the mechanism involves recruitment of SHP-2 or SHP-1 phosphatases to inhibit T cell receptor signaling such as Syk and Lck phosphorylation (Sharpe et al, Nat Immunol 2007, 8, 239-245).
• Activation of the PD-l signaling axis also attenuates PKC-0 activation loop phosphorylation, which is necessary for the activation of NF-kB and AP1 pathways, and for cytokine production such as IL-2, IFN-g and TNF (Sharpe et al, Nat Immunol 2007, 8, 239-245; Carter et al, Eur J Immunol 2002, 32(3):634-43; Freeman et al, J Exp Med 2000, 192(7): 1027-34).
• the present disclosure provides, inter alia, a compound of Formula (F)
• the present disclosure also provides a compound of Formula (I):
• the present disclosure further provides a pharmaceutical composition
• a pharmaceutical composition comprising a compound disclosed herein, or a pharmaceutically acceptable salt or a stereoisomer thereof, and one or more pharmaceutically acceptable excipient or carrier.
• the present disclosure further provides methods of inhibiting PD-1/PD-L1 interaction, said method comprising administering to a patient a compound disclosed herein, or a pharmaceutically acceptable salt or a stereoisomer thereof.
• the present disclosure further provides methods of treating a disease or disorder associated with inhibition of PD-1/PD-L1 interaction, said method comprising administering to a patient in need thereof a therapeutically effective amount of a compound of disclosed herein, or a pharmaceutically acceptable salt or a stereoisomer thereof.
• the present disclosure further provides methods of enhancing, stimulating and/or increasing the immune response in a patient, said method comprising administering to the patient in need thereof a therapeutically effective amount of a compound disclosed herein, or a pharmaceutically acceptable salt or a stereoisomer thereof.
• ring A is azetidinyl, pyrrolidinyl or piperidinyl
• X 1 is CH or N
• R 1 is methyl or halo
• R 2 is Ci-4 alkyl, Ci-4 alkoxy, Ci-4 haloalkyl, CM haloalkoxy, C3-6 cycloalkyl, C3-6 cycloalkyl-Ci-2 alkyl-, OH, NH2, -NH-CI-4 alkyl, -N(CI- 4 alkyl)2, 4- to 6-membered heterocycloalkyl or 4- to 6-membered heterocycloalkyl-Ci-2 alkyl-, wherein the 4- to 6- membered heterocycloalkyl and 4- to 6-membered heterocycloalkyl-Ci-2 alkyl- each has one or two heteroatoms as ring members selected from O and N, and wherein the Ci -4 alkyl, Ci -4 alkoxy, C 3-6 cycloalkyl, C3-6 cycloalkyl-Ci-2 alkyl-, -NH-CI-4 alkyl, -N(CI -4 alkyl)2, 4- to 6- membered heterocycloalkyl
• R 3 is selected from (R)-3-hydroxy-3-methylpyrrolidin-l-yl, (S)-3-hydroxy-3- methylpyrrolidin-l-yl, (R)-3-hydroxypyrrolidin-l-yl, (S)-3-hydroxypyrrolidin-l-yl, (R)-2- hydroxy-2-methyl-ethylamino, (S)-2-hydroxy-2-methyl-ethylamino, (R)-2-hydroxy-l-methyl- ethylamino and (S)-2-hydroxy-l-methyl-ethylamino; and
• R 4 is H or C1-3 alkyl
• R 5 is C(0)OH, C(0)N(CH 3 ) 2 , C(0)NH(CH 3 ), or C(0)NH(CH 2 ) 2 C(0)0H.
• R 5 is C(0)OH, C(0)N(CH 3 ) 2 , C(0)NH(CH 3 ), or C(0)NH(CH 2 ) 2 C(0)0H.
• ring A is azetidinyl, pyrrolidinyl or piperidinyl
• X 1 is CH or N
• R 1 is methyl or halo
• R 2 is Ci-4 alkyl, Ci-4 alkoxy, Ci-4 haloalkyl, CM haloalkoxy, C3-6 cycloalkyl, C3-6 cycloalkyl-Ci-2 alkyl-, OH, NH2, -NH-CI-4 alkyl, -N(CM alkyl)2, 4- to 6-membered heterocycloalkyl or 4- to 6-membered heterocycloalkyl-Ci-2 alkyl-, wherein the 4- to 6- membered heterocycloalkyl and 4- to 6-membered heterocycloalkyl-Ci -2 alkyl- each has one or two heteroatoms as ring members selected from O and N, and wherein the CM alkyl, Ci -4 alkoxy, C3-6 cycloalkyl, C3-6 cycloalkyl-Ci-2 alkyl-, -NH-CM alkyl, -N(CM alkyl)2, 4- to 6- membered heterocycloalkyl and 4- to 6-membere
• R 3 is selected from (R)-3-hydroxy-3-methylpyrrolidin-l-yl, (S)-3-hydroxy-3- methylpyrrolidin-l-yl, (R)-3-hydroxypyrrolidin-l-yl, (S)-3-hydroxypyrrolidin-l-yl, (R)-2- hydroxy-2-methyl-ethylamino, (S)-2-hydroxy-2-methyl-ethylamino, (R)-2-hydroxy-l -methyl- ethylamino and (S)-2-hydroxy-l-methyl-ethylamino; and
• R 4 is H or Ci-3 alkyl.
• ring A is pyrrolidinyl. In some embodiments, ring A is piperidinyl. In other embodiments, ring A is piperidinyl.
• the moiety is selected from 4-carboxypiperidin-l yl, 3-carboxypyrrolidin-l-yl, 3-methyl-3-carboxypyrrolidin-l-yl, 4-(N,N- dimethylaminocarbonyl)piperidin-l-yl, 4-(N-methylaminocarbonyl)piperidin-l-yl, and 4-(2- carboxyethylaminocarbonyl)piperidin-l-yl, wherein the wavy line indicates the point of attachment to the rest of the molecule.
• the moiety R 4 is 4-carboxypiperidin-l-yl, wherein the wavy line indicates the point of attachment to the rest of the molecule.
• the 3-carboxypyrrolidin-l-yl is (R)-3-carboxypyrrolidin-l-yl.
• the 3- carboxypyrrolidin-l-yl is (S)-3-carboxypyrrolidin-l-yl.
• the moiety is selected from 4-(N,N- dimethylaminocarbonyl)piperidin-l-yl, 4-(N-methylaminocarbonyl)piperidin-l-yl, and 4-(2- carboxyethylaminocarbonyl)piperidin-l-yl, wherein the wavy line indicates the point of attachment to the rest of the molecule.
• the moiety R 4 is 3-methyl-3-carboxypyrrolidin-l- yl, wherein the wavy line indicates the point of attachment to the rest of the molecule.
• the 3-methyl-3-carboxypyrrolidin-l-yl is (R)-3-methyl-3-carboxypyrrolidin-l-yl.
• the 3-methyl-3-carboxypyrrolidin-l-yl is (S)-3-methyl-3- carboxypyrrolidin- 1-yl.
• the moiety R 4 is selected from 4-carboxypiperidin-
• X 1 is N. In some embodiments, X 1 is CH.
• R 1 is CHb or Cl. In some embodiments, R 1 is Cfb. In some embodiments, R 1 is halo (e.g., F, Cl, or Br). In some embodiments, R 1 is Cl.
• R 2 is Ci-4 alkyl, Ci-4 alkoxy, Ci-4 haloalkyl, Ci-4 haloalkoxy, C3-6 cycloalkyl, C3-6 cycloalkyl-Ci-2 alkyl-, OH, NH2, -NH-C1-4 alkyl, -N(CI-4 alkyl)2, l-azetidinyl, azetidin-l-ylmethyl, l-pyrrolidinyl, pyrrolidin-l-ylmethyl, 1-piperidinyl, or piperidin-l- ylmethyl, wherein the C1-4 alkyl, CM alkoxy, C3-6 cycloalkyl, C3-6 cycloalkyl-Ci-2 alkyl-, -NH- C1-4 alkyl, -N(CM alkyl) 2 , l-azetidinyl, azetidin-l-ylmethyl, l-pyrrolidinyl, pyrrolidiny
• R 2 is CM alkyl, CM alkoxy, CM haloalkyl, CM haloalkoxy, OH, NH 2 , -NH-CI-4 alkyl, or -N(CM alkyl)2, wherein the CM alkyl, CM alkoxy, -NH-C1-4 alkyl, and - N(CM alkyl) 2 of R 2 are each optionally substituted with 1 or 2 substituents independently selected from halo, CN and OH.
• R 2 is C3-6 cycloalkyl, C3-6 cycloalkyl-Ci-2 alkyl-, l-azetidinyl, azetidin-l-ylmethyl, l-pyrrolidinyl, pyrrolidin-l-ylmethyl, l-piperidinyl, or piperidin-l- ylmethyl, wherein the C3-6 cycloalkyl, C3-6 cycloalkyl-Ci-2 alkyl-, l-azetidinyl, azetidin-l- ylmethyl, l-pyrrolidinyl, pyrrolidin-l-ylmethyl, l-piperidinyl and piperidin-l-ylmethyl of R 2 are each optionally substituted with 1 or 2 substituents independently selected from halo, CN and OH.
• R 2 is methyl, ethyl, isopropyl, methoxy, ethoxy, CF3, CHF2, CFH2, OCF 3 , OCHF2, OCH2F, cyclopropyl, cyclobutyl, cyclohexyl, cyclopropylmethyl, cyclobutylmethyl, cyclohexylmethyl, OH, NH2, NHCH3, N(CH3)2, l-azetidinyl, azetidin-l- ylmethyl, l-pyrrolidinyl, pyrrolidin-l-ylmethyl, l-piperidinyl or piperidin-l-ylmethyl, wherein the methyl, ethyl, isopropyl, methoxy, ethoxy, cyclopropyl, cyclobutyl, cyclohexyl, cyclopropylmethyl, cyclobutylmethyl, cyclohexyl
• R 2 is methyl, ethyl, isopropyl, methoxy, ethoxy, CF3, CHF2, CFH 2 , OCF3, OCHF2, OCH2F, OH, NH2, NHCH3, or N(CH 3 )2, wherein the methyl, ethyl, isopropyl, methoxy, ethoxy, NliCI h, and N(CH3)2 of R 2 are each optionally substituted with 1 or 2 substituents independently selected from F, Cl, Br, CN and OH.
• R 2 is cyclopropyl, cyclobutyl, cyclohexyl, cyclopropylmethyl, cyclobutylmethyl, cyclohexylmethyl, l-azetidinyl, azetidin-l-ylmethyl, 1-pyrrolidinyl, pyrrolidin-l-ylmethyl, 1-piperidinyl or piperidin-l-ylmethyl, wherein the cyclopropyl, cyclobutyl, cyclohexyl, cyclopropylmethyl, cyclobutylmethyl, cyclohexylmethyl, l-azetidinyl, azetidin-l-ylmethyl, 1-pyrrolidinyl, pyrrolidin-l-ylmethyl, 1-piperidinyl and piperidin-l- ylmethyl of R 2 are each optionally substituted with 1 or 2 substituents independently selected from F, Cl, Br, CN and
• R 2 is CH3, CF3, CHF2, CH(CH 3 )2, NH 2 , cyclopropyl, or CH2OH.
• R 2 is CM alkyl or CM haloalkyl, each of which is optionally substituted with 1 or 2 substituents independently selected from F, Cl, Br, CN and OH.
• R 2 is CM alkyl or CM haloalkyl. In some embodiments, R 2 is CH3, CF 3 , CHF2 or CH(CH 3 )2. In some embodiments, R 2 is CM alkyl such as CH3 and
• R 2 is CH(CH 3 )2. In some embodiments, R 2 is CH 3 . In some embodiments, R 2 is CH(CH 3 ) 2 . In some embodiments, R 2 is CM haloalkyl such as CF 3 , CHF 2 , and CH2F. In some embodiments, R 2 is CM haloalkyl such as CF 3 and CHF2. In some embodiments, R 2 is CF 3 . In some embodiments,
• R 2 is CHF2. In some embodiments, R 2 is CH2F.
• R 2 is NH 2 , NHCH 3 , or N(CH 3 )2, wherein the NHCH 3 and N(CH 3 ) 2 of R 2 are each optionally substituted with 1 or 2 substituents independently selected from F, Cl, Br, CN and OH. In some embodiments, R 2 is NH2.
• R 2 is cyclopropyl, cyclobutyl, or cyclohexyl, wherein the cyclopropyl, cyclobutyl, and cyclohexyl of R 2 are each optionally substituted with 1 or 2 substituents independently selected from F, Cl, Br, CN and OH.
• R 2 is cyclopropyl optionally substituted with 1 or 2 substituents independently selected from F, Cl, Br, CN and OH.
• R 2 is cyclopropyl.
• R 3 is (R)-3-hydroxy-3-methylpyrrolidin-l-yl or (S)-3-hydroxy-3- methylpyrrolidin-l-yl. In some embodiments, R 3 is (R)-3-hydroxypyrrolidin-l-yl or (S)-3- hydroxypyrrolidin-l-yl. In some embodiments, R 3 is (R)-2-hydroxy-2-methyl-ethylamino or (S)- 2-hydroxy-2-methyl-ethylamino. In some embodiments, R 3 is (R)-2-hydroxy-l-methyl- ethylamino or (S)-2-hydroxy-l-methyl-ethylamino.
• R 4 is H or CH 3 . In some embodiments, R 4 is H. In some embodiments, R 4 is Ci -3 alkyl such as CH 3 . In some embodiments, the compound provided herein is a compound of Formula II:
• the compound provided herein is a compound of Formula III:
• the compound provided herein is a compound of Formula IV:
• the compound provided herein is a compound of Formula V:
• the compound is selected from:
• the compound is selected from:
• the compound is selected from the examples provided herein.
• Ci-6 alkyl is specifically intended to individually disclose (without limitation) methyl, ethyl, C3 ⁇ 4 alkyl, C 4 alkyl, Cs alkyl and C , alkyl.
• n-membered typically describes the number of ring- forming atoms in a moiety where the number of ring-forming atoms is n.
• piperidinyl is an example of a 6-membered heterocycloalkyl ring
• pyrazolyl is an example of a 5- membered heteroaryl ring
• pyridyl is an example of a 6-membered heteroaryl ring
• 1,2,3 ,4- tetrahydro-naphthalene is an example of a lO-membered cycloalkyl group.
• each linking substituent include both the forward and backward forms of the linking substituent.
• -NR(CR'R")n- includes both -NR(CR'R") n - and -(CR'R")nNR- and is intended to disclose each of the forms individually.
• the Markush variables listed for that group are understood to be linking groups. For example, if the structure requires a linking group and the Markush group definition for that variable lists “alkyl” or “aryl” then it is understood that the "alkyl” or “aryl” represents a linking alkylene group or arylene group, respectively.
• substituted means that an atom or group of atoms formally replaces hydrogen as a "substituent" attached to another group.
• substituted refers to any level of substitution, e.g, mono-, di-, tri-, tetra- or penta-substitution, where such substitution is permitted.
• the substituents are independently selected, and substitution may be at any chemically accessible position. It is to be understood that substitution at a given atom is limited by valency. It is to be understood that substitution at a given atom results in a chemically stable molecule.
• optionally substituted means unsubstituted or substituted.
• substituted means that a hydrogen atom is removed and replaced by a substituent.
• a single divalent substituent e.g., oxo, can replace two hydrogen atoms.
• C n-m indicates a range which includes the endpoints, wherein n and m are integers and indicate the number of carbons. Examples include Ci-4, Ci-6 and the like.
• alkyl employed alone or in combination with other terms, refers to a saturated hydrocarbon group that may be straight-chained or branched.
• CVm alkyl refers to an alkyl group having n to m carbon atoms.
• An alkyl group formally corresponds to an alkane with one C-H bond replaced by the point of attachment of the alkyl group to the remainder of the compound.
• the alkyl group contains from 1 to 6 carbon atoms, from 1 to 4 carbon atoms, from 1 to 3 carbon atoms, or 1 to 2 carbon atoms.
• alkyl moieties include, but are not limited to, chemical groups such as methyl, ethyl, «-propyl, isopropyl, «- butyl, /er/-butyl, isobutyl, sec-butyl; higher homologs such as 2-methyl- 1 -butyl, «-pentyl, 3- pentyl, «-hexyl, 1,2,2-trimethylpropyl and the like.
• alkenyl employed alone or in combination with other terms, refers to a straight-chain or branched hydrocarbon group corresponding to an alkyl group having one or more double carbon-carbon bonds.
• An alkenyl group formally corresponds to an alkene with one C-H bond replaced by the point of attachment of the alkenyl group to the remainder of the compound.
• C n -m alkenyl refers to an alkenyl group having n to m carbons.
• the alkenyl moiety contains 2 to 6, 2 to 4, or 2 to 3 carbon atoms.
• Example alkenyl groups include, but are not limited to, ethenyl, «-propenyl, isopropenyl, «-butenyl, sec-butenyl and the like.
• alkynyl employed alone or in combination with other terms, refers to a straight-chain or branched hydrocarbon group corresponding to an alkyl group having one or more triple carbon-carbon bonds.
• An alkynyl group formally corresponds to an alkyne with one C-H bond replaced by the point of attachment of the alkyl group to the remainder of the compound.
• C n -m alkynyl refers to an alkynyl group having n to m carbons.
• Example alkynyl groups include, but are not limited to, ethynyl, propyn-l-yl, propyn-2-yl and the like.
• the alkynyl moiety contains 2 to 6, 2 to 4, or 2 to 3 carbon atoms.
• alkylene employed alone or in combination with other terms, refers to a divalent alkyl linking group.
• An alkylene group formally corresponds to an alkane with two C-H bond replaced by points of attachment of the alkylene group to the remainder of the compound.
• C n -m alkylene refers to an alkylene group having n to m carbon atoms.
• alkylene groups include, but are not limited to, ethan-l,2-diyl, propan- l,3-diyl, propan- l,2-diyl, butan-l,4-diyl, butan-l,3-diyl, butan-l,2-diyl, 2-methyl-propan-l,3-diyl and the like.
• alkoxy refers to a group of formula -O-alkyl, wherein the alkyl group is as defined above.
• C n -m alkoxy refers to an alkoxy group, the alkyl group of which has n to m carbons.
• Example alkoxy groups include methoxy, ethoxy, propoxy (e.g., n-propoxy and isopropoxy), -butoxy and the like.
• the alkyl group has 1 to 6, 1 to 4, or 1 to 3 carbon atoms.
• amino refers to a group of formula -NH 2 .
• cyano or "nitrile” refers to a group of formula -CoN, which also may be written as -CN.
• halo refers to fluoro, chloro, bromo and iodo.
• halo refers to a halogen atom selected from F, Cl, or Br.
• halo groups are F.
• haloalkyl refers to an alkyl group in which one or more of the hydrogen atoms has been replaced by a halogen atom.
• Cn-m haloalkyl refers to a C n -m alkyl group having n to m carbon atoms and from at least one up to ⁇ 2(n to m)+l ⁇ halogen atoms, which may either be the same or different.
• the halogen atoms are fluoro atoms.
• the haloalkyl group has 1 to 6 or 1 to 4 carbon atoms.
• Example haloalkyl groups include CF3, C2F5, CHF2, CCb, CHCh, C2CI5 and the like.
• the haloalkyl group is a fluoroalkyl group.
• haloalkoxy refers to a group of formula -O-haloalkyl, wherein the haloalkyl group is as defined above.
• C n -m haloalkoxy refers to a haloalkoxy group, the haloalkyl group of which has n to m carbons.
• Example haloalkoxy groups include trifluoromethoxy and the like. In some embodiments, the haloalkoxy group has 1 to 6, 1 to 4, or 1 to 3 carbon atoms.
• oxo refers to an oxygen atom as a divalent substituent, forming a carbonyl group when attached to carbon, or attached to a heteroatom forming a sulfoxide or sulfone group, or an N- oxide group.
• sulfurido refers to a sulfur atom as a divalent substituent, forming a
• aromatic refers to a carbocycle or heterocycle having one or more polyunsaturated rings having aromatic character (i.e ., having (4n + 2) delocalized p (pi) electrons where n is an integer).
• aryl employed alone or in combination with other terms, refers to an aromatic hydrocarbon group, which may be monocyclic or polycyclic (e.g., having 2 fused rings).
• Cn-m aryl refers to an aryl group having from n to m ring carbon atoms.
• Aryl groups include, e.g , phenyl, naphthyl, indanyl, indenyl and the like. In some embodiments, aryl groups have from 6 to about 10 carbon atoms. In some embodiments aryl groups have 6 carbon atoms. In some embodiments aryl groups have 10 carbon atoms. In some embodiments, the aryl group is phenyl. In some embodiments, the aryl group is naphthyl.
• heteroatom used herein is meant to include boron, phosphorus, sulfur, oxygen and nitrogen.
• heteroaryl or “heteroaromatic,” employed alone or in combination with other terms, refers to a monocyclic or polycyclic aromatic heterocycle having at least one heteroatom ring member selected from boron, phosphorus, sulfur, oxygen and nitrogen.
• the heteroaryl ring has 1, 2, 3 or 4 heteroatom ring members independently selected from nitrogen, sulfur and oxygen. In some embodiments, any ring-forming N in a heteroaryl moiety can be an N-oxide. In some embodiments, the heteroaryl has 5-14 ring atoms including carbon atoms and 1, 2, 3 or 4 heteroatom ring members independently selected from nitrogen, sulfur and oxygen. In some embodiments, the heteroaryl has 5-14, or 5-10 ring atoms including carbon atoms and 1, 2, 3 or 4 heteroatom ring members independently selected from nitrogen, sulfur and oxygen. In some embodiments, the heteroaryl has 5-6 ring atoms and 1 or 2 heteroatom ring members independently selected from nitrogen, sulfur and oxygen.
• the heteroaryl is a five-membered or six-membered heteroaryl ring. In other embodiments, the heteroaryl is an eight-membered, nine-membered or ten-membered fused bicyclic heteroaryl ring.
• Example heteroaryl groups include, but are not limited to, pyridinyl (pyridyl), pyrimidinyl, pyrazinyl, pyridazinyl, pyrrolyl, pyrazolyl, azolyl, oxazolyl, thiazolyl, imidazolyl, furanyl, thiophenyl, quinolinyl, isoquinolinyl, naphthyridinyl (including 1,2-, 1,3-, 1,4-, 1,5-, 1,6-, 1,7-, 1,8-, 2,3- and 2,6-naphthyridine), indolyl, benzothiophenyl, benzofuranyl, benzisoxazolyl, imidazo[l,2-6]thiazolyl, purinyl, and the like.
• pyridinyl pyridyl
• pyrimidinyl pyrazinyl
• pyridazinyl pyr
• a five-membered heteroaryl ring is a heteroaryl group having five ring atoms wherein one or more ( e.g ., 1, 2 or 3) ring atoms are independently selected from N, O and S.
• Exemplary five-membered ring heteroaryls include thienyl, furyl, pyrrolyl, imidazolyl, thiazolyl, oxazolyl, pyrazolyl, isothiazolyl, isoxazolyl, 1,2,3-triazolyl, tetrazolyl, 1,2,3-thiadiazolyl, 1,2,3- oxadiazolyl, 1,2,4-triazolyl, 1,2,4-thiadiazolyl, 1,2,4-oxadiazolyl, 1,3,4-triazolyl, 1,3,4- thiadiazolyl and 1,3,4-oxadiazolyl.
• a six-membered heteroaryl ring is a heteroaryl group having six ring atoms wherein one or more (e.g., 1, 2 or 3) ring atoms are independently selected from N, O and S.
• Exemplary six- membered ring heteroaryls are pyridyl, pyrazinyl, pyrimidinyl, triazinyl and pyridazinyl.
• cycloalkyl employed alone or in combination with other terms, refers to a non-aromatic hydrocarbon ring system (monocyclic, bicyclic or polycyclic), including cyclized alkyl and alkenyl groups.
• C n -m cycloalkyl refers to a cycloalkyl that has n to m ring member carbon atoms.
• Cycloalkyl groups can include mono- or polycyclic (e.g., having 2, 3 or 4 fused rings) groups and spirocycles. Cycloalkyl groups can have 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, or 14 ring-forming carbons (C3-14).
• the cycloalkyl group has 3 to 14 members, 3 to 10 members, 3 to 6 ring members, 3 to 5 ring members, or 3 to 4 ring members.
• the cycloalkyl group is monocyclic.
• the cycloalkyl group is monocyclic or bicyclic.
• the cycloalkyl group is a C3-6 monocyclic cycloalkyl group. Ring-forming carbon atoms of a cycloalkyl group can be optionally oxidized to form an oxo or sulfido group.
• Cycloalkyl groups also include cycloalkylidenes.
• cycloalkyl is cyclopropyl, cyclobutyl, cyclopentyl or cyclohexyl. Also included in the definition of cycloalkyl are moieties that have one or more aromatic rings fused (i.e., having a bond in common with) to the cycloalkyl ring, e.g., benzo or thienyl derivatives of
• cyclopentane cyclohexane and the like.
• a cycloalkyl group containing a fused aromatic ring can be attached through any ring-forming atom including a ring-forming atom of the fused aromatic ring.
• Examples of cycloalkyl groups include cyclopropyl, cyclobutyl, cyclopentyl, cyclohexyl, cycloheptyl, cyclopentenyl, cyclohexenyl, cyclohexadienyl, cycloheptatrienyl, norbornyl, norpinyl, norcarnyl, bicyclo[l.l.
• the cycloalkyl group is cyclopropyl, cyclobutyl, cyclopentyl, or cyclohexyl.
• heterocycloalkyl employed alone or in combination with other terms, refers to a non-aromatic ring or ring system, which may optionally contain one or more alkenylene groups as part of the ring structure, which has at least one heteroatom ring member
• heterocycloalkyl independently selected from boron, nitrogen, sulfur oxygen and phosphorus, and which has 4-14 ring members, 4-10 ring members, 4-7 ring members, or 4-6 ring members. Included within the term“heterocycloalkyl” are monocyclic 4-, 5-, 6- and 7-membered heterocycloalkyl groups. Heterocycloalkyl groups can include mono- or bicyclic or polycyclic (e.g., having two or three fused or bridged rings) ring systems or spirorcycles. In some embodiments, the heterocycloalkyl group is a monocyclic group having 1, 2 or 3 heteroatoms independently selected from nitrogen, sulfur and oxygen.
• Ring-forming carbon atoms and heteroatoms of a heterocycloalkyl group can be optionally oxidized to form an oxo or sulfido group or other oxidized linkage (e.g., C(0), S(O), C(S) or S(0)2, N-oxide etc.) or a nitrogen atom can be quatemized.
• the heterocycloalkyl group can be attached through a ring-forming carbon atom or a ring-forming heteroatom.
• the heterocycloalkyl group contains 0 to 3 double bonds.
• the heterocycloalkyl group contains 0 to 2 double bonds.
• heterocycloalkyl moieties that have one or more aromatic rings fused (i.e., having a bond in common with) to the heterocycloalkyl ring, e.g., benzo or thienyl derivatives of piperidine, morpholine, azepine, etc.
• a heterocycloalkyl group containing a fused aromatic ring can be attached through any ring-forming atom including a ring-forming atom of the fused aromatic ring.
• heterocycloalkyl groups include azetidinyl, azepanyl,
• the definitions or embodiments refer to specific rings (e.g., an azetidine ring, a pyridine ring, etc.). Unless otherwise indicated, these rings can be attached to any ring member provided that the valency of the atom is not exceeded. For example, an azetidine ring may be attached at any position of the ring, whereas an azetidin-3-yl ring is attached at the 3- position.
• the compounds described herein can be asymmetric (e.g, having one or more stereocenters). All stereoisomers, such as enantiomers and diastereomers, are intended unless otherwise indicated.
• Resolution of racemic mixtures of compounds can be carried out by any of numerous methods known in the art.
• One method includes fractional recrystallization using a chiral resolving acid which is an optically active, salt-forming organic acid.
• Suitable resolving agents for fractional recrystallization methods are, e.g., optically active acids, such as the D and L forms of tartaric acid, diacetyltartaric acid, dibenzoyltartaric acid, mandelic acid, malic acid, lactic acid or the various optically active camphorsulfonic acids such as b-camphorsulfonic acid.
• resolving agents suitable for fractional crystallization methods include stereoisomerically pure forms of a-methylbenzylamine (e.g., S and R forms, or diastereomerically pure forms), 2- phenylglycinol, norephedrine, ephedrine, TV-methylephedrine, cyclohexylethylamine, 1,2- diaminocyclohexane and the like.
• Resolution of racemic mixtures can also be carried out by elution on a column packed with an optically active resolving agent (e.g., dinitrobenzoylphenylglycine).
• an optically active resolving agent e.g., dinitrobenzoylphenylglycine
• Suitable elution solvent composition can be determined by one skilled in the art.
• the compounds of the invention have the (Reconfiguration. In other embodiments, the compounds have the ( ⁇ -configuration. In compounds with more than one chiral centers, each of the chiral centers in the compound may be independently ( R ) or (S), unless otherwise indicated.
• Tautomeric forms result from the swapping of a single bond with an adjacent double bond together with the concomitant migration of a proton.
• Tautomeric forms include prototropic tautomers which are isomeric protonation states having the same empirical formula and total charge.
• Example prototropic tautomers include ketone - enol pairs, amide - imidic acid pairs, lactam - lactim pairs, enamine - imine pairs, and annular forms where a proton can occupy two or more positions of a heterocyclic system, e.g., 1 H- and 3/f-imidazole, 1 H-, 2H- and 4 H- 1,2, 4-triazole, ⁇ H- and 211- isoindole and 1 H- and 2//-pyrazole.
• Tautomeric forms can be in equilibrium or sterically locked into one form by appropriate substitution.
• Compounds of the invention can also include all isotopes of atoms occurring in the intermediates or final compounds.
• Isotopes include those atoms having the same atomic number but different mass numbers.
• isotopes of hydrogen include tritium and deuterium.
• One or more constituent atoms of the compounds of the invention can be replaced or substituted with isotopes of the atoms in natural or non-natural abundance.
• the compound includes at least one deuterium atom.
• one or more hydrogen atoms in a compound of the present disclosure can be replaced or substituted by deuterium.
• the compound includes two or more deuterium atoms.
• the compound includes 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11 or 12 deuterium atoms. Synthetic methods for including isotopes into organic compounds are known in the art.
• compound as used herein is meant to include all stereoisomers, geometric isomers, tautomers and isotopes of the structures depicted.
• the term is also meant to refer to compounds of the inventions, regardless of how they are prepared, e.g., synthetically, through biological process (e.g., metabolism or enzyme conversion), or a combination thereof.
• All compounds, and pharmaceutically acceptable salts thereof can be found together with other substances such as water and solvents (e.g., hydrates and solvates) or can be isolated.
• solvents e.g., hydrates and solvates
• the compounds described herein and salts thereof may occur in various forms and may, e.g., take the form of solvates, including hydrates.
• the compounds may be in any solid state form, such as a polymorph or solvate, so unless clearly indicated otherwise, reference in the specification to compounds and salts thereof should be understood as encompassing any solid state form of the compound.
• the compounds of the invention, or salts thereof are substantially isolated.
• substantially isolated is meant that the compound is at least partially or substantially separated from the environment in which it was formed or detected. Partial separation can include, e.g., a composition enriched in the compounds of the invention.
• Substantial separation can include compositions containing at least about 50%, at least about 60%, at least about 70%, at least about 80%, at least about 90%, at least about 95%, at least about 97%, or at least about 99% by weight of the compounds of the invention, or salt thereof.
• pharmaceutically acceptable is employed herein to refer to those compounds, materials, compositions and/or dosage forms which are, within the scope of sound medical judgment, suitable for use in contact with the tissues of human beings and animals without excessive toxicity, irritation, allergic response, or other problem or complication, commensurate with a reasonable benefit/risk ratio.
• ambient temperature and “room temperature,” as used herein, are understood in the art, and refer generally to a temperature, e.g. , a reaction temperature, that is about the temperature of the room in which the reaction is carried out, e.g., a temperature from about 20 °C to about 30 °C.
• the present invention also includes pharmaceutically acceptable salts of the compounds described herein.
• pharmaceutically acceptable salts refers to derivatives of the disclosed compounds wherein the parent compound is modified by converting an existing acid or base moiety to its salt form.
• examples of pharmaceutically acceptable salts include, but are not limited to, mineral or organic acid salts of basic residues such as amines; alkali or organic salts of acidic residues such as carboxylic acids; and the like.
• the pharmaceutically acceptable salts of the present invention include the non-toxic salts of the parent compound formed, e.g., from non toxic inorganic or organic acids.
• the pharmaceutically acceptable salts of the present invention can be synthesized from the parent compound which contains a basic or acidic moiety by conventional chemical methods.
• such salts can be prepared by reacting the free acid or base forms of these compounds with a stoichiometric amount of the appropriate base or acid in water or in an organic solvent, or in a mixture of the two; generally, non-aqueous media like ether, ethyl acetate, alcohols (e.g., methanol, ethanol, iso-propanol or butanol) or acetonitrile (MeCN) are preferred.
• non-aqueous media like ether, ethyl acetate, alcohols (e.g., methanol, ethanol, iso-propanol or butanol) or acetonitrile (MeCN) are preferred.
• suitable salts are found in Remington's Pharmaceutical Sciences, 17 th Ed., (Mack Publishing Company, Easton, 1985), p. 1418, Berge et al., J. Pharm. Sci, 1977, 66(1), 1-19 and in Stahl et al., Handbook of Pharmaceutical Salt
• reaction can be carried out in one solvent or a mixture of more than one solvent.
• suitable solvents for a particular reaction step can be selected by the skilled artisan.
• Preparation of compounds of the invention can involve the protection and deprotection of various chemical groups.
• the need for protection and deprotection, and the selection of appropriate protecting groups, can be readily determined by one skilled in the art.
• the chemistry of protecting groups is described, e.g., in Kocienski, Protecting Groups, (Thieme, 2007);
• Reactions can be monitored according to any suitable method known in the art.
• product formation can be monitored by spectroscopic means, such as nuclear magnetic resonance spectroscopy (e.g.,‘H or 13 C), infrared spectroscopy, spectrophotometry (e.g., UV- visible), mass spectrometry or by chromatographic methods such as high performance liquid chromatography (HPLC) or thin layer chromatography (TLC).
• spectroscopic means such as nuclear magnetic resonance spectroscopy (e.g.,‘H or 13 C), infrared spectroscopy, spectrophotometry (e.g., UV- visible), mass spectrometry or by chromatographic methods such as high performance liquid chromatography (HPLC) or thin layer chromatography (TLC).
• HPLC high performance liquid chromatography
• TLC thin layer chromatography
• the compounds of the present disclosure are useful for therapeutic administration to enhance, stimulate and/or increase immunity in cancer, chronic infection or sepsis, including enhancement of response to vaccination.
• the present disclosure provides a method for inhibiting the PD-1/PD-L1 protein/protein interaction.
• the method includes administering to an individual or a patient a compound of Formula (I) or of any of the formulas as described herein, or of a compound as recited in any of the claims and described herein, or a pharmaceutically acceptable salt or a stereoisomer thereof.
• the compounds of the present disclosure can be used alone, in combination with other agents or therapies or as an adjuvant or neoadjuvant for the treatment of diseases or disorders, including cancer or infection diseases.
• any of the compounds of the disclosure including any of the embodiments thereof, may be used.
• the compounds of the present disclosure inhibit the PD-1/PD-L1 protein/protein interaction, resulting in a PD-1 pathway blockade.
• the blockade of PD-1 can enhance the immune response to cancerous cells and infectious diseases in mammals, including humans.
• the present disclosure provides treatment of an individual or a patient in vivo using a compound of Formula (I) or a salt or stereoisomer thereof such that growth of cancerous tumors is inhibited.
• a compound of Formula (I) or of any of the formulas as described herein, or a compound as recited in any of the claims and described herein, or a salt or stereoisomer thereof, can be used to inhibit the growth of cancerous tumors.
• a compound of Formula (I) or of any of the formulas as described herein, or a compound as recited in any of the claims and described herein, or a salt or stereoisomer thereof can be used in conjunction with other agents or standard cancer treatments, as described below.
• the present disclosure provides a method for inhibiting growth of tumor cells in vitro. The method includes contacting the tumor cells in vitro with a compound of Formula (I) or of any of the formulas as described herein, or of a compound as recited in any of the claims and described herein, or of a salt or stereoisomer thereof.
• the present disclosure provides a method for inhibiting growth of tumor cells in an individual or a patient.
• the method includes administering to the individual or patient in need thereof a therapeutically effective amount of a compound of Formula (I) or of any of the formulas as described herein, or of a compound as recited in any of the claims and described herein, or a salt or a stereoisomer thereof.
• a method for treating cancer includes administering to a patient in need thereof, a therapeutically effective amount of a compound of Formula (I) or any of the formulas as described herein, a compound as recited in any of the claims and described herein, or a salt thereof.
• cancers include those whose growth may be inhibited using compounds of the disclosure and cancers typically responsive to immunotherapy.
• the present disclosure provides a method of enhancing, stimulating and/or increasing the immune response in a patient.
• the method includes administering to the patient in need thereof a therapeutically effective amount of a compound of Formula (I) or any of the formulas as described herein, a compound or composition as recited in any of the claims and described herein, or a salt thereof.
• cancers that are treatable using the compounds of the present disclosure include, but are not limited to, bone cancer, pancreatic cancer, skin cancer, cancer of the head or neck, cutaneous or intraocular malignant melanoma, uterine cancer, ovarian cancer, rectal cancer, cancer of the anal region, stomach cancer, testicular cancer, uterine cancer, carcinoma of the fallopian tubes, carcinoma of the endometrium, endometrial cancer, carcinoma of the cervix, carcinoma of the vagina, carcinoma of the vulva, Hodgkin's Disease, non-Hodgkin’s lymphoma, cancer of the esophagus, cancer of the small intestine, cancer of the endocrine system, cancer of the thyroid gland, cancer of the parathyroid gland, cancer of the adrenal gland, sarcoma of soft tissue, cancer of the urethra, cancer of the penis, chronic or acute leukemias including acute myeloid leukemia, chronic myeloid leukemia, acute lymphoblastic leuk
• cancers treatable with compounds of the present disclosure include melanoma (e.g., metastatic malignant melanoma, cutaneous melanoma), renal cancer (e.g. clear cell carcinoma), prostate cancer (e.g. hormone refractory prostate adenocarcinoma), breast cancer (e.g., breast invasive carcinoma), colon cancer, lung cancer (e.g. non-small cell lung cancer and small cell lung cancer), squamous cell head and neck cancer (e.g., squamous cell carcinoma of the head and neck), urothelial cancer (e.g., bladder cancer, nonmuscle invasive bladder cancer (NMIBC)) and cancers with high microsatellite instability (MSI hlgh ).
• melanoma e.g., metastatic malignant melanoma, cutaneous melanoma
• renal cancer e.g. clear cell carcinoma
• prostate cancer e.g. hormone refractory prostate adenocarcinoma
• the disclosure includes refractory or recurrent malignancies whose growth may be inhibited using the compounds of the disclosure.
• cancers that are treatable using the compounds of the present disclosure include, but are not limited to, solid tumors (e.g., prostate cancer, colon cancer, esophageal cancer, endometrial cancer, ovarian cancer, uterine cancer, renal cancer, hepatic cancer, pancreatic cancer, gastric cancer, breast cancer, lung cancer, cancers of the head and neck, thyroid cancer, glioblastoma, sarcoma, bladder cancer, etc.), hematological cancers (e.g., lymphoma, leukemia such as acute lymphoblastic leukemia (ALL), acute myelogenous leukemia (AML), chronic lymphocytic leukemia (CLL), chronic myelogenous leukemia (CML), DLBCL, mantle cell lymphoma, Non-Hodgkin lymphoma (including relapsed or refractory NHL and recurrent follicular), Hodgkin lymphoma or multiple myeloma) and combinations
• cancers that are treatable using the compounds of the present disclosure include, but are not limited to, cholangiocarcinoma, bile duct cancer, biliary tract cancer, triple negative breast cancer, rhabdomyosarcoma, small cell lung cancer,
• leiomyosarcoma hepatocellular carcinoma, Ewing’s sarcoma, brain cancer, brain tumor, astrocytoma, neuroblastoma, neurofibroma, basal cell carcinoma, chondrosarcoma, epithelioid sarcoma, eye cancer, Fallopian tube cancer, gastrointestinal cancer, gastrointestinal stromal tumors, hairy cell leukemia, intestinal cancer, islet cell cancer, oral cancer, mouth cancer, throat cancer, laryngeal cancer, lip cancer, mesothelioma, neck cancer, nasal cavity cancer, ocular cancer, ocular melanoma, pelvic cancer, rectal cancer, renal cell carcinoma, salivary gland cancer, sinus cancer, spinal cancer, tongue cancer, tubular carcinoma, urethral cancer, and ureteral cancer.
• the compounds of the present disclosure can be used to treat sickle cell disease and sickle cell anemia.
• compounds of the present disclosure include, but are not limited to hematological cancers, sarcomas, lung cancers, gastrointestinal cancers, genitourinary tract cancers, liver cancers, bone cancers, nervous system cancers, gynecological cancers, and skin cancers.
• Exemplary hematological cancers include lymphomas and leukemias such as acute lymphoblastic leukemia (ALL), acute myelogenous leukemia (AML), acute promyelocytic leukemia (APL), chronic lymphocytic leukemia (CLL), chronic myelogenous leukemia (CML), diffuse large B-cell lymphoma (DLBCL), mantle cell lymphoma, Non-Hodgkin lymphoma (including relapsed or refractory NHL and recurrent follicular), Hodgkin
• ALL acute lymphoblastic leukemia
• AML acute myelogenous leukemia
• APL acute promyelocytic leukemia
• CLL chronic lymphocytic leukemia
• CML chronic myelogenous leukemia
• DLBCL diffuse large B-cell lymphoma
• NHL Non-Hodgkin lymphoma (including relapsed or refractory NHL and recurrent follicular)
• myeloproliferative diseases e.g., primary myelofibrosis (PMF), polycythemia vera (PV), and essential thrombocytosis (ET)
• PMF primary myelofibrosis
• PV polycythemia vera
• ET essential thrombocytosis
• MDS myelodysplasia syndrome
• T-ALL T-cell acute lymphoblastic lymphoma
• MM multiple myeloma
• Exemplary sarcomas include chondrosarcoma, Ewing’s sarcoma, osteosarcoma, rhabdomyosarcoma, angiosarcoma, fibrosarcoma, liposarcoma, myxoma, rhabdomyoma, rhabdosarcoma, fibroma, lipoma, harmatoma, and teratoma.
• Exemplary lung cancers include non-small cell lung cancer (NSCLC) (e.g., squamous cell NSCLC), small cell lung cancer, bronchogenic carcinoma (squamous cell,
• bronchiolar carcinoma bronchial adenoma
• chondromatous hamartoma bronchial adenoma
• mesothelioma bronchial adenoma
• Exemplary gastrointestinal cancers include cancers of the esophagus (carcinoma, squamous cell carcinoma, adenocarcinoma, leiomyosarcoma, lymphoma), stomach
• pancreas pancreas
• adenocarcinoma insulinoma, glucagonoma, gastrinoma, carcinoid tumors, vipoma
• small bowel adenocarcinoma, lymphoma, carcinoid tumors, Kaposi's sarcoma, leiomyoma, hemangioma, lipoma, neurofibroma, fibroma), large bowel (adenocarcinoma, tubular adenoma, villous adenoma, hamartoma, leiomyoma), and colorectal cancer (e.g., colorectal adenocarcinoma).
• Exemplary genitourinary tract cancers include cancers of the kidney
• the cancer is a urological cancer (e.g., papilliary kidney carcinoma, testicular germ cell cancer, chromophobe renal cell carcinoma, clear cell renal carcinoma, or prostate adenocarcinoma).
• a urological cancer e.g., papilliary kidney carcinoma, testicular germ cell cancer, chromophobe renal cell carcinoma, clear cell renal carcinoma, or prostate adenocarcinoma.
• liver cancers include hepatoma (hepatocellular carcinoma),
• cholangiocarcinoma hepatoblastoma, angiosarcoma, hepatocellular adenoma, and hemangioma.
• Exemplary bone cancers include, for example, osteogenic sarcoma (osteosarcoma), fibrosarcoma, malignant fibrous histiocytoma, chondrosarcoma, Ewing's sarcoma, malignant lymphoma (reticulum cell sarcoma), multiple myeloma, malignant giant cell tumor chordoma, osteochronfroma (osteocartilaginous exostoses), benign chondroma,
• osteogenic sarcoma osteosarcoma
• fibrosarcoma malignant fibrous histiocytoma
• chondrosarcoma chondrosarcoma
• Ewing's sarcoma malignant lymphoma
• multiple myeloma malignant giant cell tumor chordoma
• osteochronfroma osteocartilaginous exostoses
• benign chondroma chondroma
• Exemplary nervous system cancers include cancers of the skull (osteoma, hemangioma, granuloma, xanthoma, osteitis deformans), meninges (meningioma, meningiosarcoma, gliomatosis), brain (astrocytoma, meduoblastoma, glioma, ependymoma, germinoma (pinealoma), glioblastoma, glioblastoma multiform, oligodendroglioma, schwannoma, retinoblastoma, congenital tumors), and spinal cord (neurofibroma,
• meningioma meningioma, glioma, sarcoma), as well as neuroblastoma and Lhermitte-Duclos disease.
• Exemplary gynecological cancers include cancers of the uterus (endometrial carcinoma), cervix (cervical carcinoma, pre -tumor cervical dysplasia), ovaries (ovarian carcinoma (serous cystadenocarcinoma, serous adenocarcinoma, mucinous
• cystadenocarcinoma unclassified carcinoma
• granulosa-thecal cell tumors Sertoli-Leydig cell tumors, dysgerminoma, malignant teratoma
• vulva squamous cell carcinoma
• intraepithelial carcinoma adenocarcinoma, fibrosarcoma, melanoma
• vagina clear cell carcinoma, squamous cell carcinoma, botryoid sarcoma (embryonal rhabdomyosarcoma), and fallopian tubes (carcinoma).
• Exemplary skin cancers include melanoma, basal cell carcinoma, squamous cell carcinoma (e.g., cutaneous squamous cell carcinoma), Kaposi’s sarcoma, moles dysplastic nevi, lipoma, angioma, dermatofibroma, and keloids.
• diseases and indications that are treatable using the compounds of the present disclosure include, but are not limited to, sickle cell disease (e.g., sickle cell anemia), triple-negative breast cancer (TNBC), myelodysplastic syndromes, testicular cancer, bile duct cancer, esophageal cancer, and urothelial carcinoma.
• PD-l pathway blockade with compounds of the present disclosure can also be used for treating infections such as viral, bacteria, fungus and parasite infections.
• the present disclosure provides a method for treating infections such as viral infections. The method includes administering to a patient in need thereof, a therapeutically effective amount of a compound of Formula (I) or any of the formulas as described herein, a compound as recited in any of the claims and described herein, a salt thereof.
• viruses causing infections treatable by methods of the present disclosure include, but are not limit to, human immunodeficiency virus, human papillomavirus, influenza, hepatitis A, B, C or D viruses, adenovirus, poxvirus, herpes simplex viruses, human cytomegalovirus, severe acute respiratory syndrome virus, ebola virus, and measles virus.
• viruses causing infections treatable by methods of the present disclosure include, but are not limit to, hepatitis (A, B, or C), herpes virus (e.g., VZV, HSV-1, HAV-6, HSV-II, and CMV, Epstein Barr virus), adenovirus, influenza virus, flaviviruses, echovirus, rhinovirus, coxsackie virus, cornovirus, respiratory syncytial virus, mumpsvirus, rotavirus, measles virus, rubella virus, parvovirus, vaccinia virus, HTLV virus, dengue virus, papillomavirus, molluscum virus, poliovirus, rabies virus, JC virus, tuberculosis and arboviral encephalitis virus.
• herpes virus e.g., VZV, HSV-1, HAV-6, HSV-II, and CMV, Epstein Barr virus
• adenovirus e.g., adenovirus
• influenza virus
• the present disclosure provides a method for treating bacterial infections.
• the method includes administering to a patient in need thereof, a therapeutically effective amount of a compound of Formula (I) or any of the formulas as described herein, a compound as recited in any of the claims and described herein, or a salt thereof.
• Non-limiting examples of pathogenic bacteria causing infections treatable by methods of the disclosure include chlamydia, rickettsial bacteria, mycobacteria, staphylococci, streptococci, pneumonococci, meningococci and conococci, klebsiella, proteus, serratia, pseudomonas, legionella, diphtheria, salmonella, bacilli, cholera, tetanus, botulism, anthrax, plague, leptospirosis, and Lyme's disease bacteria.
• the present disclosure provides a method for treating fungus infections.
• the method includes administering to a patient in need thereof, a therapeutically effective amount of a compound of Formula (I) or any of the formulas as described herein, a compound as recited in any of the claims and described herein, or a salt thereof.
• pathogenic fungi causing infections treatable by methods of the disclosure include Candida (albicans, krusei, glabrata, tropicalis, etc.), Cryptococcus neoformans, Aspergillus (fumigatus, niger, etc.), Genus Mucorales (mucor, absidia, rhizophus), Sporothrix schenkii, Blastomyces dermatitidis,
• Paracoccidioides brasiliensis, Coccidioides immitis and Flistoplasma capsulatum Paracoccidioides brasiliensis, Coccidioides immitis and Flistoplasma capsulatum.
• the present disclosure provides a method for treating parasite infections.
• the method includes administering to a patient in need thereof, a therapeutically effective amount of a compound of Formula (I) or any of the formulas as described herein, a compound as recited in any of the claims and described herein, or a salt thereof.
• pathogenic parasites causing infections treatable by methods of the disclosure include Entamoeba histolytica, Balantidium coli, Naegleriafowleri, Acanthamoeba sp., Giardia lambia,
• Cryptosporidium sp. Pneumocystis carinii
• Plasmodium vivax Babesia microti
• Trypanosoma brucei Trypanosoma cruzi
• Leishmania donovani Toxoplasma gondi
• Nippostrongylus brasiliensis
• the present disclosure provides a method for treating neurodegenerative diseases or disorders.
• the method includes administering to a patient in need thereof, a therapeutically effective amount of a compound of Formula (I) or any of the formulas as described herein, a compound as recited in any of the claims and described herein, or a salt thereof.
• neurodegenerative diseases or disorders include Alzheimer’s disease, Parkinson’s disease, Fluntington’s disease, prion disease, Motor neurone diseases, Spinocerebellar ataxia and Spinal muscular atrophy. It is believed that compounds of Formula (I), or any of the embodiments thereof, may possess satisfactory pharmacological profile and promising biopharmaceutical properties, such as toxicological profile, metabolism and pharmacokinetic properties, solubility, and
• mice preferably mice, rats, other rodents, rabbits, dogs, cats, swine, cattle, sheep, horses, or primates, and most preferably humans.
• terapéuticaally effective amount refers to the amount of active compound or pharmaceutical agent that elicits the biological or medicinal response in a tissue, system, animal, individual or human that is being sought by a researcher, veterinarian, medical doctor or other clinician.
• treating refers to one or more of (1) inhibiting the disease; e.g., inhibiting a disease, condition or disorder in an individual who is experiencing or displaying the pathology or symptomatology of the disease, condition or disorder (i.e., arresting further development of the pathology and/or symptomatology); and (2) ameliorating the disease; e.g., ameliorating a disease, condition or disorder in an individual who is experiencing or displaying the pathology or symptomatology of the disease, condition or disorder (i.e., reversing the pathology and/or symptomatology) such as decreasing the severity of disease.
• the compounds of the invention are useful in preventing or reducing the risk of developing any of the diseases referred to herein; e.g., preventing or reducing the risk of developing a disease, condition or disorder in an individual who may be predisposed to the disease, condition or disorder but does not yet experience or display the pathology or symptomatology of the disease.
• Cancer cell growth and survival can be impacted by dysfunction in multiple biological pathways.
• Targeting more than one signaling pathway (or more than one biological molecule involved in a given signaling pathway) may reduce the likelihood of drug-resistance arising in a cell population, or reduce the toxicity of treatment.
• the compounds of the present disclosure can be used in combination with one or more other therapies for the treatment of diseases, such as cancer or infections. Examples of diseases and indications treatable with combination therapies include those as described herein.
• cancers include solid tumors and non-solid tumors, such as liquid tumors, blood cancers.
• infections include viral infections, bacterial infections, fungus infections or parasite infections.
• the compounds of the present disclosure can be combined with one or more inhibitors of the following kinases for the treatment of cancer: Aktl, Akt2, Akt3, BCL2, CDK, TGF-PR, PKA, PKG, PKC, CaM-kinase, phosphorylase kinase, MEKK, ERK, MAPK, mTOR, EGFR, HER2, HER3, HER4, INS-R, IDH2, IGF-1R, IR-R, PDGFotR, PDGi'PR, PI3K (alpha, beta, gamma, delta, and multiple or selective), CSF1R, KIT, FLK-1I, KDR/FLK-1, FLK-4, flt-1, FGFR1, FGFR2, FGFR3, FGFR4, c-Met,
• the compounds of the present disclosure can be combined with one or more of the following inhibitors for the treatment of cancer or infections.
• inhibitors that can be combined with the compounds of the present disclosure for treatment of cancer and infections include an FGFR inhibitor (FGFR1, FGFR2, FGFR3 or FGFR4, e.g., pemigatinib (INCY54828), INCB62079), a JAK inhibitor (JAK1 and/or JAK2, e.g., ruxolitinib, baricitinib or itacitinib (INCB39110)), an IDO inhibitor (e.g., epacadostat, NLG919, or BMS-986205, MK7162), an LSD1 inhibitor (e.g., INCB59872 and INCB60003), a TDO inhibitor, a PI3K-delta inhibitor (e.g., Parsaclisib (INCB50465) and INCB50797), a FGFR inhibitor (FGFR1,
• VEGFR inhibitor or pathway blocker e.g. bevacizumab, pazopanib, sunitinib, sorafenib, axitinib, regorafenib, ponatinib, cabozantinib, axitinib, vandetanib, ramucirumab, lenvatinib, ziv-aflibercept
• PARP inhibitor e.g.
• olaparib rucaparib, veliparib, talazoparib, or niraparib
• CSF1R inhibitor a CSF1R inhibitor
• a TAM receptor tyrosine kinases Teyro-3, Axl, and Mer
• an adenosine receptor antagonist e.g., A2a/A2b receptor antagonist
• an HPK1 inhibitor e.g.
• HDAC histone deacetylase inhibitor
• angiogenesis inhibitor for example, bromodomain inhibitors or BET inhibitors such as INCB54329 and INCB57643
• an arginase inhibitor for example, bromodomain inhibitors or BET inhibitors such as INCB54329 and INCB57643
• an arginase inhibitor for example, bromodomain inhibitors or BET inhibitors such as INCB54329 and INCB57643
• PARP inhibitor such as rucaparib or olaparib
• sitravatinib such as encorafenib plus binimetinib, dabrafenib plus trametinib, or cobimetinib plus vemurafenib
• an adenosine receptor antagonist or combinations thereof for example, bromodomain inhibitors or BET inhibitors such as INCB54329 and INCB57643
• PARP inhibitor such as rucaparib or olaparib
• sitravatinib such
• the compounds of the present disclosure can be combined with a TLR7 agonist (e.g., imiquimod).
• a TLR7 agonist e.g., imiquimod
• the compounds of the present disclosure can further be used in combination with other methods of treating cancers, for example by chemotherapy, irradiation therapy, tumor-targeted therapy, adjuvant therapy, immunotherapy or surgery.
• immunotherapy include cytokine treatment (e.g., interferons, GM-CSF, G-CSF, IL-2), CRS-207 immunotherapy, cancer vaccine, monoclonal antibody, bispecific or multi-specific antibody, antibody drug conjugate, adoptive T cell transfer, Toll receptor agonists, STING agonists, RIG-I agonists, oncolytic virotherapy and immunomodulating small molecules, including thalidomide or JAK1/2 inhibitor, PI3K6 inhibitor and the like.
• the compounds can be administered in combination with one or more anti-cancer drugs, such as a chemotherapeutic agent.
• chemotherapeutics include any of: abarelix, aldesleukin, alemtuzumab, alitretinoin, allopurinol, altretamine, anastrozole, arsenic trioxide, asparaginase, azacitidine, bevacizumab, bexarotene, baricitinib, bleomycin, , bortezomib, busulfan intravenous, busulfan oral, calusterone, capecitabine, carboplatin, carmustine, cetuximab, chlorambucil, cisplatin, cladribine, clofarabine,
• cyclophosphamide cytarabine, dacarbazine, dactinomycin, dalteparin sodium, dasatinib, daunorubicin, decitabine, denileukin, denileukin diftitox, dexrazoxane, docetaxel, doxorubicin, dromostanolone propionate, eculizumab, epirubicin, erlotinib, estramustine, etoposide phosphate, etoposide, exemestane, fentanyl citrate, filgrastim, floxuridine, fludarabine, fluorouracil, fulvestrant, gefitinib, gemcitabine, gemtuzumab ozogamicin, goserelin acetate, histrelin acetate, ibritumomab tiuxetan, idarubicin, ifosfamide, im
• anti-cancer agent(s) include antibody therapeutics such as trastuzumab (Herceptin), antibodies to costimulatory molecules such as CTLA-4 (e.g., ipilimumab), 4-1BB (e.g. urelumab, utomilumab), antibodies to PD-l and PD-L1, or antibodies to cytokines (IL-10, TGF-b, etc.).
• trastuzumab Herceptin
• CTLA-4 e.g., ipilimumab
• 4-1BB e.g. urelumab, utomilumab
• PD-l and PD-L1 antibodies to cytokines (IL-10, TGF-b, etc.
• antibodies to PD-l and/or PD-L1 that can be combined with compounds of the present disclosure for the treatment of cancer or infections such as viral, bacteria, fungus and parasite infections include, but are not limited to nivolumab, pembrolizumab, atezolizumab, durvalumab, avelumab and SHR-1210.
• Compounds of the present disclosure can be used in combination with one or more immune checkpoint inhibitors for the treatment of diseases, such as cancer or infections.
• immune checkpoint inhibitors include inhibitors against immune checkpoint molecules such as CBL-B, CD27, CD28, CD40, CD122, CD96, CD73, CD47, 0X40, GITR, CSF1R, JAK, PI3K delta, PI3K gamma, TAM, arginase, CD137 (also known as 4-1BB), ICOS, A2AR, B7-H3, B7-H4, BTLA, CTLA-4, LAG3, TIM3, TIGIT, CD112R, VISTA, PD-l, PD-L1 and PD-L2.
• immune checkpoint molecules such as CBL-B, CD27, CD28, CD40, CD122, CD96, CD73, CD47, 0X40, GITR, CSF1R, JAK, PI3K delta, PI3K gamma, TAM, arginase, CD137 (also known as 4-1BB), ICOS, A2AR, B7-H3, B7-H4,
• the immune checkpoint molecule is a stimulatory checkpoint molecule selected from CD27, CD28, CD40, ICOS, 0X40, GITR and CD137.
• the immune checkpoint molecule is an inhibitory checkpoint molecule selected from A2AR, B7-H3, B7-H4, BTLA, CTLA-4, IDO, KIR, LAG3, PD-l, TIM3, and VISTA.
• the compounds provided herein can be used in combination with one or more agents selected from KIR inhibitors, TIGIT inhibitors, LAIR1 inhibitors, CD 160 inhibitors, 2B4 inhibitors and TGFR beta inhibitors.
• the inhibitor of an immune checkpoint molecule is anti-PDl antibody, anti-PD-Ll antibody, or anti-CTLA-4 antibody.
• the inhibitor of an immune checkpoint molecule is an inhibitor of PD-l, e.g., an anti-PD-l monoclonal antibody.
• the anti-PD-1 monoclonal antibody is nivolumab, pembrolizumab (also known as MK-3475), pidilizumab, SHR-1210, PDR001, or AMP-224.
• the anti-PD-l monoclonal antibody is nivolumab or pembrolizumab.
• the anti-PDl antibody is pembrolizumab.
• the inhibitor of an immune checkpoint molecule is an inhibitor of PD-L1, e.g., an anti-PD-Ll monoclonal antibody.
• the anti-PD-Ll monoclonal antibody is BMS-935559, MEDI4736, MPDL3280A (also known as RG7446), or MSB0010718C.
• the anti-PD-Ll monoclonal antibody is MPDL3280A or MEDI4736.
• the inhibitor of an immune checkpoint molecule is an inhibitor of CTLA-4, e.g., an anti-CTLA-4 antibody.
• the anti-CTLA-4 antibody is ipilimumab or tremelimumab.
• the inhibitor of an immune checkpoint molecule is an inhibitor of LAG3, e.g., an anti-LAG3 antibody.
• the anti-LAG3 antibody is BMS- 986016, LAG525 or INCAGN2385.
• the inhibitor of an immune checkpoint molecule is an inhibitor of TIM3, e.g., an anti-TIM3 antibody.
• the anti-TIM3 antibody is
• the inhibitor of an immune checkpoint molecule is an inhibitor of GITR, e.g., an anti-GITR antibody.
• the anti-GITR antibody is TRX518, MK-4166, INCAGN1876, MK-1248, AMG228, BMS-986156, GWN323, or MEDI1873.
• the inhibitor of an immune checkpoint molecule is an inhibitor of 0X40, e.g., an anti-OX40 antibody or OX40L fusion protein.
• the anti- 0X40 antibody is MEDI0562, MOXR-0916, PF-04518600, GSK3174998, or BMS-986178.
• the OX40L fusion protein is MEDI6383.
• the compounds of the present disclosure can further be used in combination with one or more anti-inflammatory agents, steroids, immunosuppressants or therapeutic antibodies.
• the compounds of Formula (I) or any of the formulas as described herein, a compound as recited in any of the claims and described herein, or salts thereof can be combined with another immunogenic agent, such as cancerous cells, purified tumor antigens (including recombinant proteins, peptides, and carbohydrate molecules), cells, and cells transfected with genes encoding immune stimulating cytokines.
• tumor vaccines include peptides of melanoma antigens, such as peptides of gplOO, MAGE antigens, Trp-2, MARTI and/or tyrosinase, or tumor cells transfected to express the cytokine GM-CSF.
• tumor vaccines include the proteins from viruses implicated in human cancers such as Human Papilloma Viruses (HPV), Hepatitis Viruses (HBV and HCV) and Kaposi's Herpes Sarcoma Vims (KHSV).
• HPV Human Papilloma Viruses
• HBV and HCV Hepatitis Viruses
• KHSV Kaposi's Herpes Sarcoma Vims
• the compounds of the present disclosure can be used in combination with tumor specific antigen such as heat shock proteins isolated from tumor tissue itself.
• the compounds of Formula (I) or any of the formulas as described herein, a compound as recited in any of the claims and described herein, or salts thereof can be combined with dendritic cells immunization to activate potent anti-tumor responses.
• the compounds of the present disclosure can be used in combination with bispecific macrocyclic peptides that target Fe alpha or Fe gamma receptor-expressing effectors cells to tumor cells.
• the compounds of the present disclosure can also be combined with macrocyclic peptides that activate host immune responsiveness.
• the compounds of the present disclosure can be used in combination with bone marrow transplant for the treatment of a variety of tumors of hematopoietic origin.
• the compounds of Formula (I) or any of the formulas as described herein, a compound as recited in any of the claims and described herein, or salts thereof can be used in combination with vaccines, to stimulate the immune response to pathogens, toxins, and self antigens.
• pathogens for which this therapeutic approach may be particularly useful include pathogens for which there is currently no effective vaccine, or pathogens for which conventional vaccines are less than completely effective. These include, but are not limited to, FIIV, Hepatitis (A, B, & C), Influenza, Herpes, Giardia, Malaria, Leishmania, Staphylococcus aureus,
• Viruses causing infections treatable by methods of the present disclosure include, but are not limit to human papillomavirus, influenza, hepatitis A, B, C or D viruses, adenovirus, poxvirus, herpes simplex viruses, human cytomegalovirus, severe acute respiratory syndrome virus, ebola virus, measles virus, herpes virus (e.g., VZV, HSV-l, HAV-6, HSV-II, and CMV, Epstein Barr virus), flaviviruses, echovirus, rhinovirus, coxsackie virus, comovirus, respiratory syncytial virus, mumpsvirus, rotavirus, measles virus, rubella virus, parvovirus, vaccinia vims, HTLV virus, dengue virus, papillomavirus, molluscum vims, poliovirus, rabies virus, JC virus and arboviral encephalitis virus.
• human papillomavirus influenza,
• Pathogenic bacteria causing infections treatable by methods of the disclosure include, but are not limited to, chlamydia, ricketsial bacteria, mycobacteria, staphylococci, streptococci, pneumonococci, meningococci and conococci, klebsiella, proteus, serratia, pseudomonas, legionella, diphtheria, salmonella, bacilli, cholera, tetanus, botulism, anthrax, plague, leptospirosis, and Lyme's disease bacteria.
• Pathogenic fungi causing infections treatable by methods of the disclosure include, but are not limited to, Candida (albicans, krusei, glabrata, tropicalis, etc.), Cryptococcus neoformans, Aspergillus (fumigatus, niger, etc.), Genus Mucorales (mucor, absidia, rhizophus), Sporothrix schenkii, Blastomyces dermatitidis, Paracoccidioides brasiliensis, Coccidioides immitis and Histoplasma capsulatum.
• Candida albicans, krusei, glabrata, tropicalis, etc.
• Cryptococcus neoformans Aspergillus (fumigatus, niger, etc.)
• Genus Mucorales micor, absidia, rhizophus
• Sporothrix schenkii Blastomyces dermatitidis
• Paracoccidioides brasiliensis C
• Pathogenic parasites causing infections treatable by methods of the disclosure include, but are not limited to, Entamoeba histolytica, Balantidium coli, Naegleriafowleri, Acanthamoeba sp., Giardia lambia, Cryptosporidium sp., Pneumocystis carinii, Plasmodium vivax, Babesia microti, Trypanosoma brucei, Trypanosoma cruzi, Leishmania donovani, Toxoplasma gondi, and Nippostrongylus brasiliensis.
• more than one pharmaceutical agent When more than one pharmaceutical agent is administered to a patient, they can be administered simultaneously, separately, sequentially, or in combination (e.g., for more than two agents).
• the compounds of the present disclosure can be administered in the form of pharmaceutical compositions.
• a composition comprising a compound of Formula (I) or any of the formulas as described herein, a compound as recited in any of the claims and described herein, or a pharmaceutically acceptable salt thereof, or any of the embodiments thereof, and at least one pharmaceutically acceptable carrier or excipient.
• These compositions can be prepared in a manner well known in the pharmaceutical art, and can be administered by a variety of routes, depending upon whether local or systemic treatment is indicated and upon the area to be treated.
• Administration may be topical (including transdermal, epidermal, ophthalmic and to mucous membranes including intranasal, vaginal and rectal delivery), pulmonary ⁇ e.g. , by inhalation or insufflation of powders or aerosols, including by nebulizer; intratracheal or intranasal), oral or parenteral.
• Parenteral administration includes intravenous, intraarterial, subcutaneous, intraperitoneal intramuscular or injection or infusion; or intracranial, e.g., intrathecal or intraventricular, administration.
• Parenteral administration can be in the form of a single bolus dose, or may be, e.g. , by a continuous perfusion pump.
• Pharmaceutical compositions and formulations for topical administration may include transdermal patches, ointments, lotions, creams, gels, drops, suppositories, sprays, liquids and powders.
• Conventional pharmaceutical carriers, aqueous, powder or oily bases, thickeners and the like may be necessary or desirable.
• compositions which contain, as the active ingredient, the compound of the present disclosure or a pharmaceutically acceptable salt thereof, in combination with one or more pharmaceutically acceptable carriers or excipients.
• the composition is suitable for topical administration.
• the active ingredient is typically mixed with an excipient, diluted by an excipient or enclosed within such a carrier in the form of, e.g., a capsule, sachet, paper, or other container.
• the excipient serves as a diluent, it can be a solid, semi-solid, or liquid material, which acts as a vehicle, carrier or medium for the active ingredient.
• compositions can be in the form of tablets, pills, powders, lozenges, sachets, cachets, elixirs, suspensions, emulsions, solutions, syrups, aerosols (as a solid or in a liquid medium), ointments containing, e.g., up to 10% by weight of the active compound, soft and hard gelatin capsules, suppositories, sterile injectable solutions and sterile packaged powders.
• the active compound can be milled to provide the appropriate particle size prior to combining with the other ingredients. If the active compound is substantially insoluble, it can be milled to a particle size of less than 200 mesh. If the active compound is substantially water soluble, the particle size can be adjusted by milling to provide a substantially uniform distribution in the formulation, e.g., about 40 mesh.
• the compounds of the invention may be milled using known milling procedures such as wet milling to obtain a particle size appropriate for tablet formation and for other formulation types.
• Finely divided (nanoparticulate) preparations of the compounds of the invention can be prepared by processes known in the art see, e.g., WO 2002/000196.
• excipients include lactose, dextrose, sucrose, sorbitol, mannitol, starches, gum acacia, calcium phosphate, alginates, tragacanth, gelatin, calcium silicate, microcrystalline cellulose, polyvinylpyrrolidone, cellulose, water, syrup and methyl cellulose.
• the formulations can additionally include: lubricating agents such as talc, magnesium stearate and mineral oil; wetting agents; emulsifying and suspending agents; preserving agents such as methyl- and propylhydroxy-benzoates; sweetening agents; and flavoring agents.
• the compositions of the invention can be formulated so as to provide quick, sustained or delayed release of the active ingredient after administration to the patient by employing procedures known in the art.
• the pharmaceutical composition comprises silicified
• microcrystalline cellulose and at least one compound described herein, or a pharmaceutically acceptable salt thereof.
• the silicified microcrystalline cellulose comprises about 98% microcrystalline cellulose and about 2% silicon dioxide w/w.
• the composition is a sustained release composition comprising at least one compound described herein, or a pharmaceutically acceptable salt thereof, and at least one pharmaceutically acceptable carrier or excipient.
• the composition comprises at least one compound described herein, or a pharmaceutically acceptable salt thereof, and at least one component selected from microcrystalline cellulose, lactose monohydrate, hydroxypropyl methylcellulose and polyethylene oxide.
• the composition comprises at least one compound described herein, or a pharmaceutically acceptable salt thereof, and microcrystalline cellulose, lactose monohydrate and hydroxypropyl methylcellulose.
• the composition comprises at least one compound described herein, or a pharmaceutically acceptable salt thereof, and microcrystalline cellulose, lactose monohydrate and polyethylene oxide.
• the composition further comprises magnesium stearate or silicon dioxide.
• the microcrystalline cellulose is Avicel PH102TM.
• the lactose monohydrate is Fast-flo 316TM.
• the hydroxypropyl methylcellulose is hydroxypropyl methylcellulose 2208 K4M (e.g., Methocel K4 M PremierTM) and/or hydroxypropyl methylcellulose 2208 K100LV (e.g., Methocel K00LVTM).
• the polyethylene oxide is polyethylene oxide WSR 1105 (e.g, Poly ox WSR 1105TM).
• a wet granulation process is used to produce the composition. In some embodiments, a dry granulation process is used to produce the composition.
• compositions can be formulated in a unit dosage form, each dosage containing from about 5 to about 1,000 mg (1 g), more usually about 100 mg to about 500 mg, of the active ingredient. In some embodiments, each dosage contains about 10 mg of the active ingredient. In some embodiments, each dosage contains about 50 mg of the active ingredient. In some embodiments, each dosage contains about 25 mg of the active ingredient.
• unit dosage forms refers to physically discrete units suitable as unitary dosages for human subjects and other mammals, each unit containing a predetermined quantity of active material calculated to produce the desired therapeutic effect, in association with a suitable pharmaceutical excipient.
• the components used to formulate the pharmaceutical compositions are of high purity and are substantially free of potentially harmful contaminants (e.g, at least National Food grade, generally at least analytical grade, and more typically at least pharmaceutical grade).
• the composition is preferably manufactured or formulated under Good Manufacturing Practice standards as defined in the applicable regulations of the U.S. Food and Drug Administration.
• suitable formulations may be sterile and/or substantially isotonic and/or in full compliance with all Good Manufacturing Practice regulations of the U.S. Food and Drug Administration.
• the active compound may be effective over a wide dosage range and is generally administered in a therapeutically effective amount.
• the amount of the compound actually administered will usually be determined by a physician, according to the relevant circumstances, including the condition to be treated, the chosen route of administration, the actual compound administered, the age, weight, and response of the individual patient, the severity of the patient's symptoms and the like.
• the therapeutic dosage of a compound of the present invention can vary according to, e.g. , the particular use for which the treatment is made, the manner of administration of the compound, the health and condition of the patient, and the judgment of the prescribing physician.
• the proportion or concentration of a compound of the invention in a pharmaceutical composition can vary depending upon a number of factors including dosage, chemical characteristics (e.g., hydrophobicity), and the route of administration.
• the compounds of the invention can be provided in an aqueous physiological buffer solution containing about 0.1 to about 10% w/v of the compound for parenteral administration. Some typical dose ranges are from about 1 pg/kg to about 1 g/kg of body weight per day.
• the dose range is from about 0.01 mg/kg to about 100 mg/kg of body weight per day.
• the dosage is likely to depend on such variables as the type and extent of progression of the disease or disorder, the overall health status of the particular patient, the relative biological efficacy of the compound selected, formulation of the excipient, and its route of administration. Effective doses can be extrapolated from dose-response curves derived from in vitro or animal model test systems.
• the principal active ingredient is mixed with a pharmaceutical excipient to form a solid preformulation composition containing a homogeneous mixture of a compound of the present invention.
• a solid preformulation composition containing a homogeneous mixture of a compound of the present invention.
• the active ingredient is typically dispersed evenly throughout the composition so that the composition can be readily subdivided into equally effective unit dosage forms such as tablets, pills and capsules.
• This solid preformulation is then subdivided into unit dosage forms of the type described above containing from, e.g., about 0.1 to about 1000 mg of the active ingredient of the present invention.
• the tablets or pills of the present invention can be coated or otherwise compounded to provide a dosage form affording the advantage of prolonged action.
• the tablet or pill can comprise an inner dosage and an outer dosage component, the latter being in the form of an envelope over the former.
• the two components can be separated by an enteric layer which serves to resist disintegration in the stomach and permit the inner component to pass intact into the duodenum or to be delayed in release.
• enteric layers or coatings such materials including a number of polymeric acids and mixtures of polymeric acids with such materials as shellac, cetyl alcohol and cellulose acetate.
• liquid forms in which the compounds and compositions of the present invention can be incorporated for administration orally or by injection include aqueous solutions, suitably flavored syrups, aqueous or oil suspensions, and flavored emulsions with edible oils such as cottonseed oil, sesame oil, coconut oil, or peanut oil, as well as elixirs and similar
• compositions for inhalation or insufflation include solutions and suspensions in pharmaceutically acceptable, aqueous or organic solvents, or mixtures thereof, and powders.
• the liquid or solid compositions may contain suitable pharmaceutically acceptable excipients as described supra.
• the compositions are administered by the oral or nasal respiratory route for local or systemic effect.
• Compositions can be nebulized by use of inert gases. Nebulized solutions may be breathed directly from the nebulizing device or the nebulizing device can be attached to a face mask, tent, or intermittent positive pressure breathing machine. Solution, suspension, or powder compositions can be administered orally or nasally from devices which deliver the formulation in an appropriate manner.
• Topical formulations can contain one or more conventional carriers.
• ointments can contain water and one or more hydrophobic carriers selected from, e.g., liquid paraffin, polyoxyethylene alkyl ether, propylene glycol, white Vaseline, and the like.
• Carrier compositions of creams can be based on water in combination with glycerol and one or more other components, e.g. , glycerinemonostearate, PEG-glycerinemonostearate and cetylstearyl alcohol.
• Gels can be formulated using isopropyl alcohol and water, suitably in combination with other components such as, e.g., glycerol, hydroxy ethyl cellulose, and the like.
• topical formulations contain at least about 0.1, at least about 0.25, at least about 0.5, at least about 1, at least about 2 or at least about 5 wt % of the compound of the invention.
• the topical formulations can be suitably packaged in tubes of, e.g., 100 g which are optionally associated with instructions for the treatment of the select indication, e.g., psoriasis or other skin condition.
• compositions can be administered to a patient already suffering from a disease in an amount sufficient to cure or at least partially arrest the symptoms of the disease and its complications. Effective doses will depend on the disease condition being treated as well as by the judgment of the attending clinician depending upon factors such as the severity of the disease, the age, weight and general condition of the patient and the like.
• compositions administered to a patient can be in the fonn of pharmaceutical compositions described above. These compositions can be sterilized by conventional sterilization techniques, or may be sterile filtered. Aqueous solutions can be packaged for use as is, or lyophilized, the lyophilized preparation being combined with a sterile aqueous carrier prior to administration.
• the pH of the compound preparations typically will be between 3 and 11, more preferably from 5 to 9 and most preferably from 7 to 8. It will be understood that use of certain of the foregoing excipients, carriers or stabilizers will result in the formation of pharmaceutical salts.
• the therapeutic dosage of a compound of the present invention can vary according to, e.g., the particular use for which the treatment is made, the manner of administration of the compound, the health and condition of the patient, and the judgment of the prescribing physician.
• the proportion or concentration of a compound of the invention in a pharmaceutical composition can vary depending upon a number of factors including dosage, chemical characteristics (e.g., hydrophobicity), and the route of administration.
• the compounds of the invention can be provided in an aqueous physiological buffer solution containing about 0.1 to about 10% w/v of the compound for parenteral administration. Some typical dose ranges are from about 1 pg/kg to about 1 g/kg of body weight per day.
• the dose range is from about 0.01 mg/kg to about 100 mg/kg of body weight per day.
• the dosage is likely to depend on such variables as the type and extent of progression of the disease or disorder, the overall health status of the particular patient, the relative biological efficacy of the compound selected, formulation of the excipient, and its route of administration. Effective doses can be extrapolated from dose-response curves derived from in vitro or animal model test systems.
• the compounds of the present disclosure can further be useful in investigations of biological processes in normal and abnormal tissues.
• another aspect of the present invention relates to labeled compounds of the invention (radio-labeled, fluorescent-labeled, etc.) that would be useful not only in imaging techniques but also in assays, both in vitro and in vivo, for localizing and quantitating PD-l or PD-L1 protein in tissue samples, including human, and for identifying PD-L1 ligands by inhibition binding of a labeled compound.
• the present invention includes PD-1/PD-L1 binding assays that contain such labeled compounds.
• the present invention further includes isotopically-substituted compounds of the disclosure.
• An "isotopically-substituted" compound is a compound of the invention where one or more atoms are replaced or substituted by an atom having the same atomic number but a different atomic mass or mass number, e.g., a different atomic mass or mass number from the atomic mass or mass number typically found in nature (i.e., naturally occurring).
• a "radio-labeled” compound is a compound that has incorporated at least one isotope that is radioactive (e.g., radionuclide).
• Suitable radionuclides that may be incorporated in compounds of the present invention include but are not limited to 3 H (also writen as T for tritium), n C, 13 C, 14 C, 13 N, 15 N, ls O, 17 0, 18 0, 18 F, 35 S, 36 C1, 82 Br, 7 3 ⁇ 4r, 76 Br, 77 Br, 123 I, 124 I, 125 I and 13l I.
• the radionuclide that is incorporated in the instant radio-labeled compounds will depend on the specific application of that radio-labeled compound. For example, for in vitro PD- Ll protein labeling and competition assays, compounds that incorporate 3 H, 14 C, 82 Br, 125 1, 131 I, 35 S or will generally be most useful. For radio-imaging applications n C, 18 F, 125 I, 123 1, 124 I, 131 I,
• the radionuclide is selected from the group consisting of 3 H, 14 C, 125 1, 35 S and 82 Br. Synthetic methods for incorporating radio-isotopes into organic compounds are known in the art.
• a labeled compound of the invention can be used in a screening assay to identify and/or evaluate compounds.
• a newly synthesized or identified compound i.e., test compound
• a test compound which is labeled can be evaluated for its ability to bind a PD-L1 protein by monitoring its concentration variation when contacting with the PD-L1 protein, through tracking of the labeling.
• a test compound (labeled) can be evaluated for its ability to reduce binding of another compound which is known to bind to a PD-L1 protein (i.e., standard compound). Accordingly, the ability of a test compound to compete with the standard compound for binding to the PD-L1 protein directly correlates to its binding affinity.
• the standard compound is labeled and test compounds are unlabeled. Accordingly, the concentration of the labeled standard compound is monitored in order to evaluate the competition between the standard compound and the test compound, and the relative binding affinity of the test compound is thus ascertained.
• kits useful useful, e.g., in the treatment or prevention of diseases or disorders associated with the activity of PD-L1 including its interaction with other proteins such as PD-1 and B7-1 (CD80), such as cancer or infections, which include one or more containers containing a pharmaceutical composition comprising a therapeutically effective amount of a compound of Formula (I), or any of the embodiments thereof.
• kits can further include one or more of various conventional pharmaceutical kit components, such as, e.g. , containers with one or more pharmaceutically acceptable carriers, additional containers, etc., as will be readily apparent to those skilled in the art.
• Instructions, either as inserts or as labels, indicating quantities of the components to be administered, guidelines for administration, and/or guidelines for mixing the components, can also be included in the kit.
• Methyl 3-chloro-4-hydroxy-5-nitrobenzoate (2.08 g, 8.98 mmol) was hydrogenated under ambient pressure of hydrogen using palladium on carbon (10 wt%, 0.57 g, 0.539 mmol) in ethyl acetate (15 mL) for 1 h.
• the resulting suspension was filtered through a pad of Celite and washed with EtOAc and the solvent was removed under reduced pressure to give a crude product, which was purified by column chromatography (eluting with
• Step 3 methyl 2-(3-bromo-2-methylphenyl)-7-chlorobenzo[d]oxazole-5-carboxylate
• Step 6 5-(hydroxymethyl)-2-(2-methyl-3-(4, 4, 5, 5-tetramethyl-l, 3, 2-dioxaborolan-2- yl)phenyl)benzo[d]oxazole-7-carbonitrile
• Step 7 5-formyl-2-(2-methyl-3-(4, 4, 5, 5-tetramelhyl-l , 3,2-dioxaborolan-2- yl)phenyl)benzo[d]oxazole-7-carbonitrile
• Step 10 4-(3-chloro-2-methylphenylamino)-2-methylpyrido[3,2-d]pyrimidine-7- carbaldehyde
• Step 11 (R)-l-((4-(3-chloro-2-methylphenylamino)-2-methylpyrido[3,2-d]pyrimidin-7- yl)methyl)pyrrolidin-3-ol
• Step 13 (R)-l-( (7-cyano-2-(3'-(7-((3-hydroxypyrrolidin-l -yl)methyl)-2-methylpyrido[3, 2- d]pyrimidin-4-ylamino)-2,2'-dimethylbiphenyl-3-yl)benzo[d]oxazol-5-yl)methyl)piperidine-4- carboxylic acid
• Step 1 ( R)-l-((4-(3-chloro-2-methylphenylamino)-2-methylpyrido[3,2-d]pyrimidin-7 - yl)methyl)-3-methylpyrrolidin-3-ol
• Step 2 (R)-5-formyl-2-(3 '-(7-((3-hydroxy-3-methylpyrrolidin-l-yl)methyl)-2- methylpyrido[3,2-d]pyrimidin-4-ylamino)-2,2'-dimethylbiphenyl-3-yl)benzo[d]oxazole-7- carbonitrile
• Step 3 (R)-l-((7-cyano-2-(3'-(7-((3-hydroxy-3-methylpyrrolidin-l-yl)methyl)-2-methylpyrido [ 3, 2-djpyrimidin-4-ylamino)-2, 2 -dimethylbiphenyl-3-yl)benzo[d] oxazol-5- yl)methyl)piperidine-4-carboxylic acid
• Step 2 This compound was prepared using similar procedures as described for Example 1, Step 13 with (i?)-5-formyl-2-(3'-(7-((3-hydroxy-3-methylpyrrolidin-l-yl)methyl)-2- methylpyrido[3,2-d]pyrimidin-4-ylamino)-2,2'-dimethylbiphenyl-3-yl)benzo[d]oxazole-7- carbonitrile (Step 2) replacing (J?)-5-formyl-2-(3'-(7-((3-hydroxypyrrolidin-l-yl)methyl)-2- methylpyrido[3,2-d]pyrimidin-4-ylamino)-2,2'-dimethylbiphenyl-3-yl)benzo[d]oxazole-7- carbonitrile.
• Step 1 (S)-l-((4-(3-chloro-2-methylphenylamino)-2-methylpyrido[3,2-d]pyrimidin-7- yl)methyl)-3-methylpyrrolidin-3-ol
• Step 2 (S)-5-formyl-2-(3 '-(7-( (3-hydroxy-3-methylpyrrolidin-l -yl)methyl)-2- methylpyrido[3,2-d]pyrimidin-4-ylamino)-2,2'-dimethylbiphenyl-3-yl)benzo[d]oxazole-7- carbonitrile
• Step 2 This compound was prepared using similar procedures as described for Example 1, Step 13 with (.7)-5-formyl-2-(3'-(7-((3-hydroxy-3-methylpyrrolidin- l-yl)methyl)-2- methylpyrido[3,2-d]pyrimidin-4-ylamino)-2,2'-dimethylbiphenyl-3-yl)benzo[d]oxazole-7- carbonitrile (Step 2) replacing (i?)-5-formyl-2-(3'-(7-((3-hydroxypyrrolidin-l-yl)methyl)-2- methylpyrido[3,2-d]pyrimidin-4-ylamino)-2,2'-dimethylbiphenyl-3-yl)benzo[d]oxazole-7- carbonitrile.
• Step 1 (S)-2-( (4-(3-chloro-2-methylphenylamino)-2-methylpyrido[3,2-d]pyrimidin-7- yl)methylamino)propan-l-ol
• Step 3 (S)-l-( (7-cyano-2-(3’-(7-( ( 1 -hydroxypropan-2-ylamino)methyl)-2-methylpyrido[3, 2- d]pyrimidin-4-ylamino)-2,2'-dimethylbiphenyl-3-yl)bemo[d]oxazol-5-yl)methyl)piperidine-4- carboxylic acid
• Step 2 This compound was prepared using similar procedures as described for Example 1, Step 13 with ( 1 S')-5-fonnyl-2-(3'-(7-((l -hydroxypropan-2-ylaniino)methyl)-2- methylpyrido[3,2-d]pyrimidin-4-ylamino)-2,2'-dimethylbiphenyl-3-yl)benzo[d]oxazole-7- carbonitrile (Step 2) replacing (i?)-5-formyl-2-(3'-(7-((3-hydroxypyrrolidin-l-yl)methyl)-2- methylpyrido[3,2-d]pyrimidin-4-ylamino)-2,2'-dimethylbiphenyl-3-yl)benzo[d]oxazole-7- carbonitrile.
• Step 1 (S)-l-((4-(3-chloro-2-methylphenylamino)-2-methylpyrido[3,2-d]pyrimidin-7- yl)methylamino)propan-2-ol
• Step 2 (S)-5-formyl-2-(3'-(7-((2-hydroxypropylamino)methyl)-2-methylpyrido[3,2- d]pyrimidin-4-ylamino)-2,2'-dimethylbiphenyl-3-yl)benzo[d]oxazole-7-carbonitrile
• Step 3 (S)-l-((7-cyano-2-(3'-(7-((2-hydroxypropylamino)methyl)-2-methylpyrido[3,2- d]pyrimidin-4-ylamino)-2,2'-dimethylbiphenyl-3-yl)benzo[d]oxazol-5-yl)methyl)piperidine-4- carboxylic acid
• Step 13 with (»S)-5-formyl-2-(3'-(7-((2-hydroxypropylamino)methyl)-2-methylpyndo[3,2- d]pyrimidin-4-ylamino)-2,2'-dimethylbiphenyl-3-yl)benzo[d]oxazole-7-carbonitrile ⁇ Step 2) replacing (7?)-5-formyl-2-(3'-(7-((3-hydroxypyrrolidin-l-yl)methyl)-2-methylpyrido[3,2- d]pyrimidin-4-ylamino)-2,2'-dimethylbiphenyl-3-yl)benzo[d]oxazole-7-carbonitrile.
• Step 1 7-bromo-2-(difluoromelhyl)-4H-pyrido[3,2-d] [l, 3 ]oxazin-4-one
• Step 4 1 V-(3-chloro-2-methylphenyl)-2-(difluoromethyl)-7-vinylpyrido[3,2-d]pyrimidin-4- amine
• Step 5 4-(3-chloro-2-methylphenylamino)-2-(difluoromethyl)pyrido [3, 2-d] pyrimidine-7- carbaldehyde
• Step 6 (R)-l-((4-(3-chloro-2-methylphenylamino)-2-(difluoromethyl)pyrido[3,2-d]pyrimidin- 7-yl)methyl)pyrrolidin-3-ol
• Step 7 (R)-2-(3'-(2-(difluoromethyl)-7-((3-hydroxypyrrolidin-l-yl)methyl)pyrido[3,2- d]pyrimidin-4-ylamino)-2,2'-dimethylbiphenyl-3-yl)-5-formylbenzo[d]oxazole-7-carbonitrile
• Step 8 (R)-l-((7-cyano-2-(3'-(2-(difluoromethyl)-7-((3-hydroxypyrrolidin-l- yl)methyl)pyrido[3,2-d]pyrimidin-4-ylamino)-2,2'-dimethylbiphenyl-3-yl)benzo[d]oxazol-5- yl)methyl)piperidine-4-carboxylic acid
• Step 1 (R)-5-formyl-2-(3'-(7-((3-hydroxypyrrolidin-l-yl)methyl)-2- (trifluoromethyl)pyrido[3, 2-d]pyrimidin-4-ylamino)-2, 2 '-dimethylbiphenyl-3- yl)benzo[ d] oxazole- 7 -carbon itrile
• Step 13 with (R)-5-formyl-2-(3'-(7-((3-hydroxypyrrolidin-l-yl)methyl)-2- (trifluoromethy l)pyrido [3 ,2-d] pyrimidin-4-y lamino)-2,2'-dimethy lbiphenyl-3 - yl)benzo[d]oxazole-7-carbonitrile (Step 1) replacing (i?)-5-formyl-2-(3'-(7-((3- hydroxypyrrolidin-l-yl)methyl)-2-methylpyrido[3,2-d]pyrimidin-4-ylamino)-2,2'- dimethylbiphenyl-3-yl)benzo[d]oxazole-7-carbonitrile.
• Step 2 (R)-l-((7-cyano-2-(3 '-(2-cyclopropyl-7-(((R)-3-hydroxypyrrolidin-l- yl)methyl)pyrido[3,2-d]pyrimidin-4-ylamino)-2,2'-dimethylbiphenyl-3-yl)benzo[d]oxazol-5- yl)methyl)pyrrolidine-3-carboxylic acid
• Step 3 (R)-l-((2-amino-4-(3-chloro-2-melhylphenylamino)pyrido[3,2-d]pyrimidin-7- yl)methyl)pyrrolidin-3-ol
• Step 5 (R)-l-((2-(3'-(2-amino-7-((3-hydroxypyrrolidin-l-yl)methyl)pyrido[3,2-d]pyrimidin- 4-ylamino)-2,2'-dimethylbiphenyl-3-yl)-7-cyanobenzo[d]oxazol-5-yl)methyl)piperidine-4- carboxylic acid
• Step 1 (R)-l-((4-(3-chloro-2-methylphenylamino)-2-(difluoromethyl)pyrido[3,2-d]pyrimidin- 7-yl)methyl)-3-methylpyrrolidin-3-ol
• Step 2 (R)-l-((7-cyano-2-(3'-(2-(difluoromethyl)-7-((3-hydroxy-3-methylpyrrolidin-l- yl)methyl)pyrido[3,2-d]pyrimidin-4-ylamino)-2,2'-dimethylbiphenyl-3-yl)benzo[d]oxazol-5- yl)methyl)piperidine-4-carboxylic acid
• Step 3 7-bromo-2-((tert-butyldimethylsilyloxy)methyl)-N-(3-chloro-2- methylphenyl)pyrido[3,2-d]pyrimidin-4-amine
• Step 5 (R)-l ⁇ ((7-cyano-2-(3 '-(2-(hydroxymethyl)-7-((3-hydroxypyrrolidin-l- yl)methyl)pyrido[3,2-d]pyrimidin-4-ylamino)-2,2'-dimethylbiphenyl-3-yl)benzo[d]oxazol-5- yl)methyl)piperidine-4-carboxylic acid
• Step 3 (R)-l-((8-(3-chloro-2-methylphenylamino)-6-methyl-l, 7-naphthyridin-3- yl)methyl)pyrrolidin-3-ol
• Step 5 (R)-l-((7-cyano-2-(3'-(3-(((R)-3-hydroxypyrrolidin-l-yl)melhyl)-6-melhyl-l, 7- naphthyridin-8-ylamino)-2,2'-dimethylbiphenyl-3-yl)benzo[d]oxazol-5-yi)methyl)pyrrolidine- 3-carboxylic acid
• Step 1 (R)-2-(3'-(6-(difluoromethyl)-3-((3-hydroxypyrrolidin-l-yl)methyl)-l, 7-naphthyridin- 8-ylamino)-2,2'-dimethylbiphenyl-3-yl)-5-formylbenzo[d]oxazole-7-carbonitrile
• Step 2 (R)-l-((7-cyano-2-(3'-(6-(difluoromethyl)-3-(((R)-3-hydroxypyrrolidin-l-yl)methyl)- 1, 7-naphthyridin-8-ylamino)-2,2'-dimethylbiphenyl-3-yl)benzo[d]oxazol-5-yl)methyl)-3- methylpyrrolidine- 3 -carboxylic acid
• Example A Homogeneous Time-Resolved Fluorescence (HTRF) PD-1 PD-L1 Binding Assay
• the assays were conducted in a standard black 384-well polystyrene plate with a final volume of 20 pL. Inhibitors were first serially diluted in DMSO and then added to the plate wells before the addition of other reaction components. The final concentration of DMSO in the assay was 1%. The assays were carried out at 25° C in the PBS buffer (pH 7.4) with 0.05% Tween-20 and 0.1% BSA. Recombinant human PD-L1 protein (19-238) with a His- tag at the C-terminus was purchased from AcroBiosystems (PD1-H5229).
• Recombinant human PD-1 protein (25-167) with Fc tag at the C-terminus was also purchased from AcroBiosystems (PD1-H5257).
• PD-L1 and PD-l proteins were diluted in the assay buffer and 10 pL was added to the plate well. Plates were centrifuged and proteins were preincubated with inhibitors for 40 minutes. The incubation was followed by the addition of 10 pL of HTRF detection buffer supplemented with Europium cryptate-labeled anti-human IgG (PerkinElmer-AD02l2) specific for Fc and anti-His antibody conjugated to SureLight®- Allophycocyanin (APC, PerkinElmer-AD0059H). After centrifugation, the plate was incubated at 25° C for 60 min. before reading on a PHERAstar FS plate reader
• U20S/PD-L1 cells (DiscoveRx Corporation) were maintained in McCoy’s 5 A medium with addition of 10% FBS, 0.25 pg/ml Puromycin. After removing the culture media, the cell medium was replaced with assay medium (RPM11640 medium with 1% FBS). The U20S/PD-L1 cells were then added in 384-well black clear bottom assay plate
• Test compounds were prepared by serial dilution in DMSO and 125 nL compound were first transferred to the 384 REMP plate well (Thermofisher) by ECHO liquid handler (Labcyte) followed with addition of 27.5 pL assay medium. 5 pL/well compounds in the assay medium were transferred to the cell plate with 0.05% DMSO in the final assay at 0.25 pM.
• Jurkat-PD-l-SFlP cells (DiscoveRx Corporation) were cultured in RPMI1640 medium supplemented with 10% FBS, 250 pg/ml Hygromycin B, 500 pg/ml G418. After the replacement of culture media with assay medium, 5,000 Jurkat-PD-l-SHP cells in 20 pL were dispensed into each well. The assay plate was incubated at 37 °C, 5% CO2 for 2 hours before 2.5 pL PathHunter reagent 1 (DiscoveRx Corporation) were added to each well. The assay plate was shaken for 1 min at 350 rpm in the dark followed with addition of 10 pL PathHunter reagent 2 (DiscoveRx Corporation).
• Chemiluminescent signal was recorded with TopCount reader (Perkin Elmer) after incubation at room temperature for 1 hour. Wells with DMSO were served as the positive controls and wells containing no cells were used as negative controls. IC50 determination was performed by fitting the curve of percentage of control activity versus the log of the compound concentration using the GraphPad Prism 6.0 software.
• PD-L1 aAPC/CHO-Kl cells (Promega) were maintained in F-12 medium with addition of 10% FBS, 200 pg/ml Hygromycin B, 250 pg/ml Geneticin (G418).
• Jurkat-PD-1- NFAT effector cells (Promega) were cultured in RPMI 1640 medium supplemented with 10% FBS, 100 pg/ml Hygromycin B, 500 pg/ml G418.
• the culture media of PD-L1 aAPC/CHO-Kl cells were first replaced with assay medium (RPMI 1640 medium with 1% FBS).
• the PD-L1 aAPC/CHO-Klcells were then added in a white 384-well white clear bottom assay plate (CELLCOAT® Tissue Culture Plates, Greiner Bio-One) at 8000 per well in 10 pL assay medium.
• Test compounds were prepared by serial dilution in DMSO and 0.8 pL test compounds in DMSO were first transferred to the 384 REMP plate well
• Thermofisher by PlateMate Plus (Thermofisher) followed with addition of 50 pL plating medium.
• 5 pL compounds in the assay medium were transferred to the cells with 0.4% DMSO in the final assay at 2 pM.
• 10,000 Jurkat-PD-1- NFAT effector cells in 5pL assay medium was dispensed into each well.
• the assay plate was incubated at 37 °C, 5% CO2 for 24 hours. After the assay plate was equilibrated to room temp for 15 minutes, 20pL/well of Bio-GloTM reagent (Promega) were added.
• PD-L1 internalization in human whole blood normal human blood (Biological Specialty Corp, Colmar. PA) was incubated in the presence or absence of a concentration range of test compounds and 1 ng/ml human interferon g (R&D Systems Inc. Minn. MN) in a 96 well“2ml Assay Block” (Coming, Coming NY) for 18-20 hours at 37°C. Blood was then stained with PD-L1 (MIH1, eBioscience; or BD Biosciences San Jose, CA), CD 14 (Life Technologies, Carlsbad, CA) for 30 minutes in the dark at room temperature.
• PD-L1 MIH1, eBioscience; or BD Biosciences San Jose, CA
• CD 14 Life Technologies, Carlsbad, CA
• test compounds were administered to male
• test compounds were dosed at 0.5 to 1 mg/kg using a formulation of 10% dimethylacetamide (DMAC) in acidified saline via IV bolus for rat and 5 min or 10 min IV infusion for dog and monkey respectively.
• DMAC dimethylacetamide
• test compounds were dosed at 1.0 to 3.0 mg/kg using 5% DMAC in 0.5% methylcellulose in citrate buffer (pH 3.5). Blood samples were collected at predose and various time points up to 24 hours postdose. All blood samples were collected using EDTA as the anticoagulant and centrifuged to obtain plasma samples. The plasma concentrations of test compounds are determined by LC-MS methods. The measured plasma concentrations are used to calculate PK parameters by standard noncompartmental methods using Phoenix ® WinNonlin software program (version 7.0, Pharsight Corporation).

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