JPH06500087A - 新規のポリアミン結合オリゴヌクレオチド - Google Patents
新規のポリアミン結合オリゴヌクレオチドInfo
- Publication number
- JPH06500087A JPH06500087A JP3513696A JP51369691A JPH06500087A JP H06500087 A JPH06500087 A JP H06500087A JP 3513696 A JP3513696 A JP 3513696A JP 51369691 A JP51369691 A JP 51369691A JP H06500087 A JPH06500087 A JP H06500087A
- Authority
- JP
- Japan
- Prior art keywords
- oligonucleotide
- nucleoside
- polyamine
- functional group
- nnh
- Prior art date
- Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
- Pending
Links
- 108091034117 Oligonucleotide Proteins 0.000 title claims abstract description 108
- 229920000768 polyamine Polymers 0.000 title claims abstract description 61
- JLCPHMBAVCMARE-UHFFFAOYSA-N [3-[[3-[[3-[[3-[[3-[[3-[[3-[[3-[[3-[[3-[[3-[[5-(2-amino-6-oxo-1H-purin-9-yl)-3-[[3-[[3-[[3-[[3-[[3-[[5-(2-amino-6-oxo-1H-purin-9-yl)-3-[[5-(2-amino-6-oxo-1H-purin-9-yl)-3-hydroxyoxolan-2-yl]methoxy-hydroxyphosphoryl]oxyoxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(5-methyl-2,4-dioxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxyoxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(5-methyl-2,4-dioxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(4-amino-2-oxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(5-methyl-2,4-dioxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(5-methyl-2,4-dioxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(4-amino-2-oxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(4-amino-2-oxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(4-amino-2-oxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(4-amino-2-oxopyrimidin-1-yl)oxolan-2-yl]methyl [5-(6-aminopurin-9-yl)-2-(hydroxymethyl)oxolan-3-yl] hydrogen phosphate Polymers Cc1cn(C2CC(OP(O)(=O)OCC3OC(CC3OP(O)(=O)OCC3OC(CC3O)n3cnc4c3nc(N)[nH]c4=O)n3cnc4c3nc(N)[nH]c4=O)C(COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3CO)n3cnc4c(N)ncnc34)n3ccc(N)nc3=O)n3cnc4c(N)ncnc34)n3ccc(N)nc3=O)n3ccc(N)nc3=O)n3ccc(N)nc3=O)n3cnc4c(N)ncnc34)n3cnc4c(N)ncnc34)n3cc(C)c(=O)[nH]c3=O)n3cc(C)c(=O)[nH]c3=O)n3ccc(N)nc3=O)n3cc(C)c(=O)[nH]c3=O)n3cnc4c3nc(N)[nH]c4=O)n3cnc4c(N)ncnc34)n3cnc4c(N)ncnc34)n3cnc4c(N)ncnc34)n3cnc4c(N)ncnc34)O2)c(=O)[nH]c1=O JLCPHMBAVCMARE-UHFFFAOYSA-N 0.000 title claims abstract description 39
- 238000000034 method Methods 0.000 claims description 58
- 239000002777 nucleoside Substances 0.000 claims description 50
- 150000003833 nucleoside derivatives Chemical class 0.000 claims description 36
- IQFYYKKMVGJFEH-XLPZGREQSA-N Thymidine Chemical group O=C1NC(=O)C(C)=CN1[C@@H]1O[C@H](CO)[C@@H](O)C1 IQFYYKKMVGJFEH-XLPZGREQSA-N 0.000 claims description 33
- 125000000524 functional group Chemical group 0.000 claims description 17
- OAKJQQAXSVQMHS-UHFFFAOYSA-N hydrazine group Chemical group NN OAKJQQAXSVQMHS-UHFFFAOYSA-N 0.000 claims description 16
- 229940104230 thymidine Drugs 0.000 claims description 15
- DWRXFEITVBNRMK-UHFFFAOYSA-N Beta-D-1-Arabinofuranosylthymine Natural products O=C1NC(=O)C(C)=CN1C1C(O)C(O)C(CO)O1 DWRXFEITVBNRMK-UHFFFAOYSA-N 0.000 claims description 14
- 230000000692 anti-sense effect Effects 0.000 claims description 14
- IQFYYKKMVGJFEH-UHFFFAOYSA-N beta-L-thymidine Natural products O=C1NC(=O)C(C)=CN1C1OC(CO)C(O)C1 IQFYYKKMVGJFEH-UHFFFAOYSA-N 0.000 claims description 14
- 125000003729 nucleotide group Chemical group 0.000 claims description 14
- 125000003835 nucleoside group Chemical group 0.000 claims description 13
- 239000002773 nucleotide Substances 0.000 claims description 13
- RYYWUUFWQRZTIU-UHFFFAOYSA-K thiophosphate Chemical compound [O-]P([O-])([O-])=S RYYWUUFWQRZTIU-UHFFFAOYSA-K 0.000 claims description 11
- 239000000074 antisense oligonucleotide Substances 0.000 claims description 10
- 238000012230 antisense oligonucleotides Methods 0.000 claims description 10
- 125000002924 primary amino group Chemical group [H]N([H])* 0.000 claims description 8
- 108090000623 proteins and genes Proteins 0.000 claims description 8
- BRWIZMBXBAOCCF-UHFFFAOYSA-N thiosemicarbazide group Chemical group NNC(=S)N BRWIZMBXBAOCCF-UHFFFAOYSA-N 0.000 claims description 8
- 239000007787 solid Substances 0.000 claims description 7
- 201000010099 disease Diseases 0.000 claims description 6
- 208000037265 diseases, disorders, signs and symptoms Diseases 0.000 claims description 6
- 125000006239 protecting group Chemical group 0.000 claims description 6
- 238000004519 manufacturing process Methods 0.000 claims description 5
- XQFRJNBWHJMXHO-RRKCRQDMSA-N IDUR Chemical compound C1[C@H](O)[C@@H](CO)O[C@H]1N1C(=O)NC(=O)C(I)=C1 XQFRJNBWHJMXHO-RRKCRQDMSA-N 0.000 claims description 4
- RYYWUUFWQRZTIU-UHFFFAOYSA-N Thiophosphoric acid Chemical group OP(O)(S)=O RYYWUUFWQRZTIU-UHFFFAOYSA-N 0.000 claims description 4
- 239000003814 drug Substances 0.000 claims description 4
- 230000002194 synthesizing effect Effects 0.000 claims description 4
- 208000003154 papilloma Diseases 0.000 claims description 3
- 230000014616 translation Effects 0.000 claims description 3
- 125000003277 amino group Chemical group 0.000 claims description 2
- 238000010348 incorporation Methods 0.000 claims description 2
- XEVRDFDBXJMZFG-UHFFFAOYSA-N carbonyl dihydrazine Chemical group NNC(=O)NN XEVRDFDBXJMZFG-UHFFFAOYSA-N 0.000 claims 3
- 230000001105 regulatory effect Effects 0.000 claims 1
- 230000004048 modification Effects 0.000 abstract description 11
- 238000012986 modification Methods 0.000 abstract description 11
- 101710163270 Nuclease Proteins 0.000 abstract description 9
- 230000004700 cellular uptake Effects 0.000 abstract description 8
- QJGQUHMNIGDVPM-UHFFFAOYSA-N nitrogen group Chemical group [N] QJGQUHMNIGDVPM-UHFFFAOYSA-N 0.000 abstract description 6
- 150000002429 hydrazines Chemical class 0.000 abstract 1
- 150000001412 amines Chemical class 0.000 description 14
- 238000003786 synthesis reaction Methods 0.000 description 13
- IAZDPXIOMUYVGZ-UHFFFAOYSA-N Dimethylsulphoxide Chemical compound CS(C)=O IAZDPXIOMUYVGZ-UHFFFAOYSA-N 0.000 description 12
- -1 alkyl triester Chemical class 0.000 description 12
- 239000002585 base Substances 0.000 description 11
- 230000015572 biosynthetic process Effects 0.000 description 11
- 229910052799 carbon Inorganic materials 0.000 description 8
- 150000001875 compounds Chemical class 0.000 description 8
- 239000005289 controlled pore glass Substances 0.000 description 7
- 150000008300 phosphoramidites Chemical class 0.000 description 7
- 238000011160 research Methods 0.000 description 7
- 229910052717 sulfur Inorganic materials 0.000 description 7
- 238000011282 treatment Methods 0.000 description 7
- 108020000948 Antisense Oligonucleotides Proteins 0.000 description 6
- 108020004414 DNA Proteins 0.000 description 6
- 101710149951 Protein Tat Proteins 0.000 description 6
- 210000004027 cell Anatomy 0.000 description 6
- JXTHNDFMNIQAHM-UHFFFAOYSA-N dichloroacetic acid Chemical compound OC(=O)C(Cl)Cl JXTHNDFMNIQAHM-UHFFFAOYSA-N 0.000 description 6
- 235000018102 proteins Nutrition 0.000 description 6
- 102000004169 proteins and genes Human genes 0.000 description 6
- 241000894007 species Species 0.000 description 6
- 238000002560 therapeutic procedure Methods 0.000 description 6
- 108091032973 (ribonucleotides)n+m Proteins 0.000 description 5
- OKTJSMMVPCPJKN-UHFFFAOYSA-N Carbon Chemical compound [C] OKTJSMMVPCPJKN-UHFFFAOYSA-N 0.000 description 5
- OAICVXFJPJFONN-UHFFFAOYSA-N Phosphorus Chemical compound [P] OAICVXFJPJFONN-UHFFFAOYSA-N 0.000 description 5
- 125000002777 acetyl group Chemical group [H]C([H])([H])C(*)=O 0.000 description 5
- 230000000694 effects Effects 0.000 description 5
- 229910052760 oxygen Inorganic materials 0.000 description 5
- 150000003141 primary amines Chemical class 0.000 description 5
- DUIOPKIIICUYRZ-UHFFFAOYSA-N semicarbazide Chemical compound NNC(N)=O DUIOPKIIICUYRZ-UHFFFAOYSA-N 0.000 description 5
- VOWRYWPKXSMTOK-UHFFFAOYSA-N (amino-tert-butyl-phenylsilyl)benzene Chemical compound C=1C=CC=CC=1[Si](N)(C(C)(C)C)C1=CC=CC=C1 VOWRYWPKXSMTOK-UHFFFAOYSA-N 0.000 description 4
- VHUUQVKOLVNVRT-UHFFFAOYSA-N Ammonium hydroxide Chemical compound [NH4+].[OH-] VHUUQVKOLVNVRT-UHFFFAOYSA-N 0.000 description 4
- 238000006243 chemical reaction Methods 0.000 description 4
- 230000000295 complement effect Effects 0.000 description 4
- 238000010511 deprotection reaction Methods 0.000 description 4
- 230000003993 interaction Effects 0.000 description 4
- BKHGFBHADSLTHZ-UHFFFAOYSA-N n',n'-bis(4-aminobutyl)butane-1,4-diamine Chemical compound NCCCCN(CCCCN)CCCCN BKHGFBHADSLTHZ-UHFFFAOYSA-N 0.000 description 4
- 229910052698 phosphorus Inorganic materials 0.000 description 4
- 239000011574 phosphorus Substances 0.000 description 4
- 230000008569 process Effects 0.000 description 4
- 238000010561 standard procedure Methods 0.000 description 4
- 241001529453 unidentified herpesvirus Species 0.000 description 4
- OKKJLVBELUTLKV-UHFFFAOYSA-N Methanol Chemical compound OC OKKJLVBELUTLKV-UHFFFAOYSA-N 0.000 description 3
- 241001631646 Papillomaviridae Species 0.000 description 3
- 239000004952 Polyamide Substances 0.000 description 3
- ZMANZCXQSJIPKH-UHFFFAOYSA-N Triethylamine Chemical compound CCN(CC)CC ZMANZCXQSJIPKH-UHFFFAOYSA-N 0.000 description 3
- 239000000908 ammonium hydroxide Substances 0.000 description 3
- 239000003153 chemical reaction reagent Substances 0.000 description 3
- HVYWMOMLDIMFJA-DPAQBDIFSA-N cholesterol Chemical group C1C=C2C[C@@H](O)CC[C@]2(C)[C@@H]2[C@@H]1[C@@H]1CC[C@H]([C@H](C)CCCC(C)C)[C@@]1(C)CC2 HVYWMOMLDIMFJA-DPAQBDIFSA-N 0.000 description 3
- 229960005215 dichloroacetic acid Drugs 0.000 description 3
- 125000002485 formyl group Chemical class [H]C(*)=O 0.000 description 3
- 230000006870 function Effects 0.000 description 3
- 238000004128 high performance liquid chromatography Methods 0.000 description 3
- 230000003834 intracellular effect Effects 0.000 description 3
- 238000005731 phosphitylation reaction Methods 0.000 description 3
- 229920000729 poly(L-lysine) polymer Polymers 0.000 description 3
- 229920002647 polyamide Polymers 0.000 description 3
- 239000007858 starting material Substances 0.000 description 3
- 230000001225 therapeutic effect Effects 0.000 description 3
- VNOPDYRWCWFIBS-KBVBSXBZSA-N 1-[(2r,4s,5r)-4-acetyl-4-hydroxy-5-(hydroxymethyl)oxolan-2-yl]-5-methylpyrimidine-2,4-dione Chemical compound O1[C@H](CO)[C@@](C(=O)C)(O)C[C@@H]1N1C(=O)NC(=O)C(C)=C1 VNOPDYRWCWFIBS-KBVBSXBZSA-N 0.000 description 2
- VZSRBBMJRBPUNF-UHFFFAOYSA-N 2-(2,3-dihydro-1H-inden-2-ylamino)-N-[3-oxo-3-(2,4,6,7-tetrahydrotriazolo[4,5-c]pyridin-5-yl)propyl]pyrimidine-5-carboxamide Chemical compound C1C(CC2=CC=CC=C12)NC1=NC=C(C=N1)C(=O)NCCC(N1CC2=C(CC1)NN=N2)=O VZSRBBMJRBPUNF-UHFFFAOYSA-N 0.000 description 2
- KDCGOANMDULRCW-UHFFFAOYSA-N 7H-purine Chemical compound N1=CNC2=NC=NC2=C1 KDCGOANMDULRCW-UHFFFAOYSA-N 0.000 description 2
- QGZKDVFQNNGYKY-UHFFFAOYSA-N Ammonia Chemical compound N QGZKDVFQNNGYKY-UHFFFAOYSA-N 0.000 description 2
- IJGRMHOSHXDMSA-UHFFFAOYSA-N Atomic nitrogen Chemical compound N#N IJGRMHOSHXDMSA-UHFFFAOYSA-N 0.000 description 2
- 101100459439 Caenorhabditis elegans nac-2 gene Proteins 0.000 description 2
- RTZKZFJDLAIYFH-UHFFFAOYSA-N Diethyl ether Chemical compound CCOCC RTZKZFJDLAIYFH-UHFFFAOYSA-N 0.000 description 2
- 241000124008 Mammalia Species 0.000 description 2
- 229910019142 PO4 Inorganic materials 0.000 description 2
- VYPSYNLAJGMNEJ-UHFFFAOYSA-N Silicium dioxide Chemical compound O=[Si]=O VYPSYNLAJGMNEJ-UHFFFAOYSA-N 0.000 description 2
- ISAKRJDGNUQOIC-UHFFFAOYSA-N Uracil Chemical compound O=C1C=CNC(=O)N1 ISAKRJDGNUQOIC-UHFFFAOYSA-N 0.000 description 2
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- OPTASPLRGRRNAP-UHFFFAOYSA-N cytosine Chemical compound NC=1C=CNC(=O)N=1 OPTASPLRGRRNAP-UHFFFAOYSA-N 0.000 description 2
- 230000014509 gene expression Effects 0.000 description 2
- UYTPUPDQBNUYGX-UHFFFAOYSA-N guanine Chemical compound O=C1NC(N)=NC2=C1N=CN2 UYTPUPDQBNUYGX-UHFFFAOYSA-N 0.000 description 2
- 229910052739 hydrogen Inorganic materials 0.000 description 2
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- 230000002829 reductive effect Effects 0.000 description 2
- BEOOHQFXGBMRKU-UHFFFAOYSA-N sodium cyanoborohydride Chemical compound [Na+].[B-]C#N BEOOHQFXGBMRKU-UHFFFAOYSA-N 0.000 description 2
- 239000000126 substance Substances 0.000 description 2
- 235000001508 sulfur Nutrition 0.000 description 2
- RWRDLPDLKQPQOW-UHFFFAOYSA-N tetrahydropyrrole Substances C1CCNC1 RWRDLPDLKQPQOW-UHFFFAOYSA-N 0.000 description 2
- RWQNBRDOKXIBIV-UHFFFAOYSA-N thymine Chemical compound CC1=CNC(=O)NC1=O RWQNBRDOKXIBIV-UHFFFAOYSA-N 0.000 description 2
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- SWGZHHCRMZDRSN-BTJKTKAUSA-N (Z)-but-2-enedioic acid 1-phenoxypropan-2-ylhydrazine Chemical compound OC(=O)\C=C/C(O)=O.NNC(C)COC1=CC=CC=C1 SWGZHHCRMZDRSN-BTJKTKAUSA-N 0.000 description 1
- AZINJOAUEDYASP-UHFFFAOYSA-N 1-n,1-n'-diphenylethane-1,1-diamine Chemical compound C=1C=CC=CC=1NC(C)NC1=CC=CC=C1 AZINJOAUEDYASP-UHFFFAOYSA-N 0.000 description 1
- MKSUIIJJRMJEEW-UHFFFAOYSA-N 3-amino-6-[bis(4-aminobutyl)amino]-1,1,1,8,8,8-hexafluoro-3-(2,2,2-trifluoroacetyl)octane-2,7-dione Chemical compound NCCCCN(CCCCN)C(C(=O)C(F)(F)F)CCC(N)(C(=O)C(F)(F)F)C(=O)C(F)(F)F MKSUIIJJRMJEEW-UHFFFAOYSA-N 0.000 description 1
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- NOUUUQMKVOUUNR-UHFFFAOYSA-N n,n'-diphenylethane-1,2-diamine Chemical compound C=1C=CC=CC=1NCCNC1=CC=CC=C1 NOUUUQMKVOUUNR-UHFFFAOYSA-N 0.000 description 1
- 229930014626 natural product Natural products 0.000 description 1
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- 238000002515 oligonucleotide synthesis Methods 0.000 description 1
- 239000012074 organic phase Substances 0.000 description 1
- 230000003647 oxidation Effects 0.000 description 1
- 230000035515 penetration Effects 0.000 description 1
- 239000003208 petroleum Substances 0.000 description 1
- 230000000144 pharmacologic effect Effects 0.000 description 1
- ZUOUZKKEUPVFJK-UHFFFAOYSA-N phenylbenzene Natural products C1=CC=CC=C1C1=CC=CC=C1 ZUOUZKKEUPVFJK-UHFFFAOYSA-N 0.000 description 1
- 125000002467 phosphate group Chemical group [H]OP(=O)(O[H])O[*] 0.000 description 1
- 235000011007 phosphoric acid Nutrition 0.000 description 1
- 230000037081 physical activity Effects 0.000 description 1
- 239000013612 plasmid Substances 0.000 description 1
- 230000003389 potentiating effect Effects 0.000 description 1
- 238000002360 preparation method Methods 0.000 description 1
- 238000012545 processing Methods 0.000 description 1
- 239000000047 product Substances 0.000 description 1
- 238000000746 purification Methods 0.000 description 1
- 230000009467 reduction Effects 0.000 description 1
- 230000000717 retained effect Effects 0.000 description 1
- 230000002441 reversible effect Effects 0.000 description 1
- 238000012552 review Methods 0.000 description 1
- 150000007659 semicarbazones Chemical class 0.000 description 1
- 239000000377 silicon dioxide Substances 0.000 description 1
- 239000011734 sodium Substances 0.000 description 1
- 229910052708 sodium Inorganic materials 0.000 description 1
- 238000010532 solid phase synthesis reaction Methods 0.000 description 1
- 239000000243 solution Substances 0.000 description 1
- 239000002904 solvent Substances 0.000 description 1
- 125000002345 steroid group Chemical group 0.000 description 1
- 239000012258 stirred mixture Substances 0.000 description 1
- 238000006467 substitution reaction Methods 0.000 description 1
- 239000011593 sulfur Substances 0.000 description 1
- 125000004434 sulfur atom Chemical group 0.000 description 1
- 238000001308 synthesis method Methods 0.000 description 1
- 238000010189 synthetic method Methods 0.000 description 1
- BCNZYOJHNLTNEZ-UHFFFAOYSA-N tert-butyldimethylsilyl chloride Chemical compound CC(C)(C)[Si](C)(C)Cl BCNZYOJHNLTNEZ-UHFFFAOYSA-N 0.000 description 1
- 229940124597 therapeutic agent Drugs 0.000 description 1
- KYMBYSLLVAOCFI-UHFFFAOYSA-N thiamine Chemical compound CC1=C(CCO)SCN1CC1=CN=C(C)N=C1N KYMBYSLLVAOCFI-UHFFFAOYSA-N 0.000 description 1
- 235000019157 thiamine Nutrition 0.000 description 1
- 229960003495 thiamine Drugs 0.000 description 1
- 239000011721 thiamine Substances 0.000 description 1
- 229940113082 thymine Drugs 0.000 description 1
- 230000014621 translational initiation Effects 0.000 description 1
- ILJSQTXMGCGYMG-UHFFFAOYSA-N triacetic acid Chemical compound CC(=O)CC(=O)CC(O)=O ILJSQTXMGCGYMG-UHFFFAOYSA-N 0.000 description 1
- 125000004044 trifluoroacetyl group Chemical group FC(C(=O)*)(F)F 0.000 description 1
- 238000005583 trifluoroacetylation reaction Methods 0.000 description 1
- 229940035893 uracil Drugs 0.000 description 1
- 235000021419 vinegar Nutrition 0.000 description 1
- 239000000052 vinegar Substances 0.000 description 1
Classifications
-
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- C07—ORGANIC CHEMISTRY
- C07D—HETEROCYCLIC COMPOUNDS
- C07D405/00—Heterocyclic compounds containing both one or more hetero rings having oxygen atoms as the only ring hetero atoms, and one or more rings having nitrogen as the only ring hetero atom
- C07D405/02—Heterocyclic compounds containing both one or more hetero rings having oxygen atoms as the only ring hetero atoms, and one or more rings having nitrogen as the only ring hetero atom containing two hetero rings
- C07D405/04—Heterocyclic compounds containing both one or more hetero rings having oxygen atoms as the only ring hetero atoms, and one or more rings having nitrogen as the only ring hetero atom containing two hetero rings directly linked by a ring-member-to-ring-member bond
-
- A—HUMAN NECESSITIES
- A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
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-
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- A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
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- C07D—HETEROCYCLIC COMPOUNDS
- C07D405/00—Heterocyclic compounds containing both one or more hetero rings having oxygen atoms as the only ring hetero atoms, and one or more rings having nitrogen as the only ring hetero atom
- C07D405/14—Heterocyclic compounds containing both one or more hetero rings having oxygen atoms as the only ring hetero atoms, and one or more rings having nitrogen as the only ring hetero atom containing three or more hetero rings
-
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- C07—ORGANIC CHEMISTRY
- C07F—ACYCLIC, CARBOCYCLIC OR HETEROCYCLIC COMPOUNDS CONTAINING ELEMENTS OTHER THAN CARBON, HYDROGEN, HALOGEN, OXYGEN, NITROGEN, SULFUR, SELENIUM OR TELLURIUM
- C07F7/00—Compounds containing elements of Groups 4 or 14 of the Periodic Table
- C07F7/02—Silicon compounds
- C07F7/08—Compounds having one or more C—Si linkages
- C07F7/18—Compounds having one or more C—Si linkages as well as one or more C—O—Si linkages
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Abstract
(57)【要約】本公報は電子出願前の出願データであるため要約のデータは記録されません。
Description
【発明の詳細な説明】
新規のポリアミン結合オリゴヌクレオチド発明の分野
本発明は、治療法の分野に関し、特に、アンチセンス療法による感染の治療に関
する0本発明は、更に、遺伝子発現の分野に関する。アンチセンス療法において
有用である新規のポリアミン結合ホスホロチオエートオリゴヌクレオチドを提供
する。これらのオリゴヌクレオチドは細胞の取込みを増大させ、そしてその結果
として生物学的および治療学的活性を増大させた。更に、本発明は、新規のポリ
アミン結合ホスホロチオエートオリゴヌクレオチドの合成法を提供する。
発明の背景
大部分の疾患状態を含む哺乳動物における大部分の身体的状態かタンパク質によ
って影響されていることは周知である。直接的にまたはそれらの酵素機能を介し
て作用するこのようなタンパク質は、主要な割合で動物およびヒトにおける多く
の疾患の一因となっている。古典的治療法は、概して、このようなタンパク質の
疾患を引き起こす機能または疾患を強力にする機能を調節するための研究におい
て該タンパク質との相互作用に関心か向けられてきた。しかしながら、近年、こ
のようなタンパク質の実際の産生を、それらの合成を支配する分子である細胞内
RNAとの相互作用によって調節する試みがなされた。これらの相互作用は、相
補的「アンチセンス」オリゴヌクレオチドまたはそれらの類似体かワトソン・ク
リック塩基対相互作用によるような配列特異的様式で細胞内RNAに対して結合
することを必要とした。
アンチセンスオリゴヌクレオチドの薬理学的活性並びに他の治療法は、特定の細
胞内標的でのこれらの物質の有効濃度に影響を及ぼす多数の因子に依存する。
一つの重要な因子はヌクレアーゼ存在下におけるオリゴヌクレオチドの安定性で
ある。もう一つの重要な因子は、疾患経過に関係した特定の細胞の原形質膜を通
過するアンチセンス化合物の能力である。
細胞膜は、小さい非イオン性の親油性化合物に対して自由に透過性であり且つ大
部分の天然代謝生成物および治療薬に対して本来的に透過性である脂質タンパク
質二重層から成る、ウィルソン(Wi I 5on)、D、B、、Ann、Re
vBiochem、47 : 933〜965 (1978)、培養された哺乳
動物細胞における天然のおよび修飾されたオリゴヌクレオチドの生物学的および
抗ウイルス性作用は十分に実証されており、これらの物質は膜に浸透してそれら
の細胞内標的に到達することかできると考えられる。HL−60、シリアンハム
スター(Syrian Hamste’r)″m維芽細胞、U937、L929
、CV−1およびATH8細胞を含む種々の哺乳動物細胞中へのアンチセンス化
合物の取込みは、天然オリゴヌクレオチドおよびヌクレアーゼ耐性類似体、例え
ば、アルキルトリエステル[ミラー(Mi l 1er)、P、S、、ブライタ
マン(Braiterman)、L、T、およびTs′O,P、O,P、。
Biochemistry 工6 :1988〜1996 (1977)コ;メ
チルホスホネート[マークス・セクラ<Marcus−3ekura)、C,H
,。
ワーナー(Woerner)、A、M、、シノズカ(Shi nozuka)、
K。
S、、マクバーランド(McPar 1and)、に、B、、 バイアマン(H
yerman)、におよびTs′O,P、O,P、。
Biochemistr 20:1874〜1880(1981)];およびホ
スホロチオエート[セルノ(Ceruzzi)、Mおよびトレーパー(Drap
er)、に、、Nucleosides &Nucleotides 8:81
5〜818(1989);ミラー、p、s、。
ブライタ?ン、L、T、およびTs′O,P、O,P、。
Biochemi 5try 上6 :1988〜1996 (1977)およ
びローフ(Loke)、S、L、−スタイン(Stei n)、C,、ザング(
Zhang)、X、H,、エイビガン(Avigan)、M、、コーエン(Co
hen)、J、およびネッカーズ(Neckers)、L、M、。
Curr、Top、Microbiol、Immunol、141:282〜2
89 (1988)]を用いて研究された。
ホスホロチオエートは、各リン酸結合の酸素原子か硫黄で置換されているオリゴ
ヌクレオチド類似体て゛ある。全体の電荷は保持され、したかって、それらはホ
スホジエステルオリゴヌクレオチドとの関係において同等であるか、この種類の
類似体のいくつかの性質は、それらを他の修飾化合物よりも興味深いものにする
。
これらには、化学合成の容易さ、十分な水への溶解性、比較的高いヌクレアーゼ
耐性および相補的DNAまたはRNA9を有する安定な二重らせんを形成する能
力かある。しかしながら、ホスホロチオエートは、ローフ(Loke)ら、Pr
oc、Nat 1.Acad、Sc i、U、S、A、86 : 3473〜3
478(1989)によって天然化合物に関して同時に研究されており、それら
はそれらのヌクレアーゼ耐性ゆえに有用であることかできるので、それらはそれ
らの天然オリゴヌクレオチド対応物はど効率よく内在化<1nternaliz
ed)されていない。
ヌクレオチド化学の進歩により、オリゴヌクレオチドの3′および5′末端に官
能基を結合させて、特定の細胞種での細胞の取込みを増大させることか可能にな
った。従来の研究では、アジアログリコプロティン−ポリ(L−リシン)結合体
と複合したプラスミドDNAは、ガラクトース末端のアシアログリコプロティン
に対する独特の細胞表面受容体を含む肝細胞を標的とすることができることか示
された、ウー(Wu)、G、Y、およびウー(Wu)、C,H,。
旦土立立江立匹1且旦二ヱ λ7:887〜892 (1988)、 他(f)
グルー7”は、5′結合アルキル化剤および3′結合コレステロール残基を有す
るオリゴデオキシリボヌクレオチドを合成し、そしてこれらの修飾オリゴヌクレ
オチドが、ステロイド残基不含の対照化合物よりも効率よく細胞中に取込まれる
ことを確認した、シン(Zon)、G、 、念上上盈立亘且旦工X旦且旦土且旦
工土旦旦互二Antisense Tnhibitors of Gene旦五
三ニ1且旦土on 234〜247.J、S、コーエン(Cohen)監修(C
RCプレス(Pressiボカ・ラドン、FL、1989)、レツインガ−(L
etsinger)ら、Proc、Nat 1.Acad、Sc i、U、S。
A、86:653〜656 (1989)では、更に、コレステリル結合ホスホ
ロチオエートを合成しており、その抗HIV活性は同一配列を有する天然オリゴ
ヌクレオチドよりも有意に大きい。更に別の修飾としては、ポリ(L−リシン)
のみに対するオリゴヌクレオチドの結合がある、ステイーブンマン(Steve
nson)、M、およびアイヴアセン(Iversen)、P、L。
、、J、Gen、Vi ro 1.70 : 2673〜2682 <1989
)およびルメートル(Lemaitre)、M、 、ベイナート(Baynar
d)、B、およびルブリュ−(LeBleu)、B、、Proc、Natl、A
cad、Sci。
U、S、A、84 : 648〜652 (1987)、この修飾は、おそらく
は、多階イオン性ポリ(L−リシン)によって与えられた増大した細胞の取込み
ゆえに、研究された化合物の抗ウィルス活性を増大させた。
従来入手可能なアンチセンスオリゴヌクレオチドの活性は、実際の治療、研究ま
たは診断用に用いるのに十分ではなかった。この不十分の根拠はいくつか組合わ
されていると考えられる、すなわち、(1)標的RNAの二次および三次構造の
不完全な理解、(2)デリバリ−および取込みの低百分率、(3)他の細胞性成
分による反応性中枢の失活および(4)タンパク質産生の阻害に対する化学量論
的条件の必要性である。
化学的修飾によるアンチセンスオリゴヌクレオチドの細胞の取込みの増大は明ら
かな利点を有するであろう、更に、新規の修飾は、新規の化合物の増大した親油
性、一層大きい保持および増大した分布を導くことができる。特定の細胞内標的
部位でのオリゴヌクレオチドの濃度の増大は、望ましい効果を生じるのに少量の
薬剤しか必要がないので、結局はこれらの化合物の安全性および有効性を増大さ
せることができる。
したがって、有効な治療および診断用アンチセンスの使用が可能であるオリゴヌ
クレオチドおよびオリゴヌクレオチド類似体、具体的には、細胞中への輸送を促
進する官能基から成り、同時に、ヌクレアーゼ活性に対して野生種はど感受性で
ないオリゴヌクレオチドまたはオリゴヌクレオチド類似体に対する必要性は長い
間感じられていたし、そしてなお続いている。この長い間感じられていた必要性
は、アンチセンスオリゴヌクレオチド療法および診断法の分野での先行研究によ
って満たされなかった。
発明の要約
本発明により、細胞の取込みを増大させるように修飾されている新規の種類のア
ンチセンスオリゴヌクレオチドを提供する。ポリアミンに対する直接結合によっ
て修飾された少なくとも1個のヌクレオシドを有するオリゴヌクレオチドは、こ
の目的を達成するのに有効であることか分かった。ヌクレオシドをその糖残基の
5′位でポリアミンに結合させるのが好ましい。本発明によるオリゴヌクレオチ
ドは、ホスホロチオエートまたは池の主鎖が修飾された種であるように修飾され
るのが好ましい、オリゴヌクレオチドは、好ましくは、長さが約5〜約50核酸
塩基であることができる0本発明の好ましい実施態様により、オリゴヌクレオチ
ドはHIVゲノムのtat領域をコードする。他の好ましい実施態様により、H
IVゲノムのtat領域をコードする選択された配列はその5′末端にチミジン
を有する。他の好ましいアンチセンスオリゴヌクレオチド配列としては、ヘルペ
ス、パピローマおよび他のウィルスに相補的な配列かある。
ホスホロチオエートオリゴヌクレオチドの5′末端で見出されるのか好ましい修
飾ヌクレオシドは、何等かのピリミジンまたはプリンであることかできる。しか
しながら、本発明の好ましい実施態様は、修飾されたチミジンを5′末端に包含
する。
修飾ヌクレオシドは、その糖残基の5′位でヌクレオシドに結合したポリアミン
上の官能基のヌクレアーゼ耐性結合であるのが好ましい、ポリアミン官能基は、
第一アミン、ヒドラジン、セミカルバジン、チオセミカルバジンまたは類似の窒
素含有種を含むことができる。ポリアミンの好ましい立体配置は、ポリアミンの
末端の官能基に関して各アミン機能毎に対称的炭素スペース基を包含する。
修飾ヌクレオシドおよびポリアミン官能基間の結合は、概して、当該技術分野で
現在知られている官能付加基ではないのか好ましい0通常のホスホジエステル結
合よりもむしろ、付加が直接5′位で生じる。この結合は、それがヌクレアーゼ
耐性であるという理由で当該技術分野の現在の状況にまさる改良であるのみなら
す、付加におけるオリゴヌクレオチドまたはオリゴヌクレオチド類似体へのこの
官能基の直接結合は、天然に存在するオリゴヌクレオチドに相対して優れた細胞
の取込みを与える。この優れた細胞の取込みは、ポリアミンを、オリゴヌクレオ
チド結合体の糖−リン酸主鎖並びにポリアミン−オリゴヌクレオチドへテロ二本
鎖の主鎖に沿って逆に向けることができるので、ポリアミンがオリゴヌクレオチ
ドの陰電荷を有する中和作用のためと考えられる。
本発明は、更に、このようなオリゴヌクレオチドを合成する方法、例えば、前述
の好ましい実施態様のものなどの適当な官能基と反応するように活性化すること
ができる中間生成物の合成を含む経路に関する。これらの方法は、活性化が生じ
る固体支持体を用いる。固体支持体のこのような使用は、DNA合成機によるか
または固体支持体の手動操作若しくはそれ以外によることができる。
発明の目的
本発明の主な目的は、アンチセンスオリゴヌクレオチド診断法、研究用試薬およ
び治療法において用いるためのオリゴヌクレオチド類似体を提供することである
。
本発明の更に別の目的は、増大した細胞の取込みを有するヌクレアーゼ耐性オリ
ゴヌクレオチド類似体を提供することである。
本発明のもう一つの目的は、天然に存在するアンチセンスオリゴヌクレオチドよ
りも治療学的に安全であり且つ有効性が大きいこのようなオリゴヌクレオチド類
似体を提供することである。
本発明の更にもう一つの目的は、固体支持体を用いる修飾オリゴヌクレオチドの
合成法を提供することである。
これらのおよび他の目的は、本明細書の論評から当業者に明らかになるものであ
る。
図面の簡単な説明
図1は、本発明の実施において有用な若干のポリアミン官能基の合成に有用なあ
る種の合成スキームのフローチャートである。
図2は、本発明において有用なポリアミン結合ホスホロチオエートオリゴヌクレ
オチドの合成の一つの方法を示す。
発明の詳細な説明
従来入手可能なアンチセンスオリゴヌクレオチドの生物学的活性は、概して、実
際の治療、研究または診断に用いるのに十分ではなかった7本発明はそれ自体、
修飾された天然に存在するオリゴヌクレオチドおよび類似木並乙(にこのような
修飾を行うための方法を指示する。これらの修飾オリゴヌクレオチドおよびオリ
ゴヌクレオチド類似体は、それらの天然に存在する対応物に相対して増大した生
物学的活性を示す。更に、これらの修飾は、当業者に一般的に知られている方法
方法論を用いて手動によって操作するかまたはDNA合成機と連結して用いるこ
とかできる固体支持体を用いて行うことかできる。
本発明の文脈において、「オリゴヌクレオチドJという用語は、本来のホスホジ
エステル結合によって糖基を介して結合した天然に存在する複素環式塩基および
フラノシル糖基から特異的配列で生成された複数の結合したヌクレオチジ単位を
意味する。これらのヌクレオチド巣位は、核酸塩基、例えば、グアニン、アデニ
ン、シトシン、チミンまたはウラシルであることができる。糖基はデオキシリボ
ースまたはりボーヌ糖であることができる。この用語は、天然に存在する種また
は天然に存在するサブユニットから生成された合成種双方を意味する。
本発明に関連して用語を用いる場合の「オリゴヌクレオチド類似体」は、オリゴ
ヌクレオチドと同様に機能するが、天然に存在する部分を有していない残基を意
味する。オリゴヌクレオチド類似体は、変更された糖残基または糖内結合、例え
ば、ホスホロチオエートおよび当該技術分野で用いるのに知られている池の硫黄
含有種を有することができる。オリゴヌクレオチド類似体は、更に、特定のオリ
ゴヌクレオチドをアンチセンス療法、診断用または研究用試薬に用いることを容
易にするために、変更された塩基巣位まなは本発明の精神と矛盾しない他の修飾
を含むことができる。
本発明により、概して、最終的に合成が調節さ?Lまたは完全に阻害されるタン
パク質の産生に関r系しているDNaまたはRNAに対して相補的であるオリゴ
ヌクレオチド配列か選択される6本発明の一つの好ましい実施態様は、HIVの
tat領域をコードするD N 、A 、:なはRNAに対して相補的なアンチ
センスオリゴヌクレオチド類似体である。eの好ましい実施態様はヘルペスおよ
びパピローマウィルスに関するが、なお他は当業者に明らがである。
更に、本発明の好ましい実施態様により、ホスホロチオエート結合を、オリゴヌ
クレオチドの糖リン酸主祭を通常含むホスホジエステル結合に代用する。これら
のオリゴヌクレオチド類似体を、それらの末端の5′末端でヌクレオシドの付加
によって更に修飾するのが好ましいにのヌクレオシド類似体は修飾チミジンであ
るのか最も好ましい。前記の修飾ヌクレオシドは、チミジンの糖残基の5′位で
・のような保護基の付加を更に含むことができる。本発明の一つの好ましい実施
態様による保護基は1.3−ジフェニルイミダゾリニル基である。
オリゴヌクレオチド類似体中に包含された修飾ヌクレオシド類似体を、窒素含有
官能基を有するそのlli残基の5′位での保護基の置換によって更に修飾する
のが好ましい、窒素含有官能基は、第一アミン、ヒドラジン、セミカルバジド、
チオセミカルバジドまたはアルデヒド性機能と反応することができる他の基など
の末端官能基を有するポリアミンであるのが好ましいが、図1に示したようなポ
リアミン8またはポリアミン10の構造を有するポリアミンであるのが好ましい
。
窒素含有官能基と修飾ヌクレオシドのアルデヒド性基との反応後に、中間体シッ
プ塩基(イミン)、ヒドラジンまたはセミカルバゾンを還元して置換アミン、ヒ
ドラジンまたはセミカルバジドにする。最も好ましい窒素含有官能基は図1に示
したようなポリアミン10の構造を育する。
したがって、好ましいポリアミンは、一般式%式%
(式中、Xは第一アミン、ヒドラジン、セミカルバジドまたはチオセミカルバジ
ドであり且つnは2〜6の整数である)を有する。
より一層好ましいポリアミンは、一般式HN(CH) NH(CH) NH(C
H2)nNH−22n 2n
(式中、nは2〜6の整数である)
を有する。nは4であるのが好ましい。
理論に束縛されたくはないが、正に荷電しているポリアミンは、オリゴヌクレオ
チドの陰電荷の糖−リン酸主鎖に沿って位置していると考えられる。この立体配
置は、オリゴヌクレオチドの陰電荷を中和し且つオリゴヌクレオチドの細胞透過
を増大させると考えられる。いくつかの最近の報告は、ポリアミンが主溝の塩基
対の末端に水素結合を生成することがあることを示唆した、ローフ(Loke)
、S、L、 、スタイン(Ste in)、C,A、 、ザング(Zhang)
、X。
Hl、そり(Mori)、に、 、ナカニシ(Nakanishi)、M、 、
スバシンギ(Subashi nghe)、G1、コーエン(Choen)、J
、S。
およびネッカース(Neckers)、L、M、、Proc、Nat l。
Acad、Sc t、U、S、A、86 : 3473〜3479 (1989
)、この問題を避けるために、本発明は、ホスホジエステル結合を介するポリア
ミンの結合を用いないのが好ましいが、その代わりにポリアミンを直接5′位に
結合させる。ホスホジエステル結合を結合リンカ−として除去し且つポリアミン
を直接5′位に結合させることによって、オリゴヌクレオチド結合体の糖すン酸
主鋳並びにポリアミン−オリゴヌクレオチドへテロ二本鎖に沿った逆のポリアミ
ン鎖を支配する強い性質が存在すると考えられる。
本発明の好ましい実施態様は、各アミン毎に約4個の炭素単位を有するポリアミ
ンを用いる。炭素スペーサーは、アミン基との関係において種々の立体配置で配
列することができる。この配列は、オリゴヌクレオチドおよびそのヘテロ二本鎖
のポリアミンの部位存在を支配するのに有用であることができる。結合したオリ
ゴヌクレオチドおよびそれらのへテロ二本鎖のある位置にポリアミンが存在する
ように支配するこの能力は、オリゴヌクレオチド取込みおよび他のオリゴヌクレ
オチドの性質に関係がある重要性を有すると考えられる。他の多数の炭素単位は
、本発明による好ましいポリアミンの窒素原子間に間隔を置くことができる。
当業者は、特定の状況に最適の立体配置を選択する場合に広範な許容範囲を有し
、例えば、2個、5個、6個または他の個数の炭素単位を用いることができる。
本発明のある態様により、図2は、修飾ホスホルアミダイトオリゴヌクレオチド
類似体の一つの化学合成法を示す。特に、図2は、1,3−ジフェニルイミダゾ
リジン保護5′−アルデヒド性−3’−(2−シアノエチル−N、N−ジイソプ
ロピルホスホルアミジチル)チミジンの合成に関係した新規の方法を示す、この
塩基安定性のチミジン類似体を望ましいオリゴヌクレオチド配列の5′末端に置
き、必要ならば活性化して、第一アミン、ヒドラジン、セミカルバジドまたはチ
オセミカルバジドなどのポリアミンを結合する。
図2で示した方法によって用いた出発物質は、ツイツテ−(Pfitzner)
およびモファット(Moffatt)、フイツナー、に、E、ら、止工Amer
ican、Chem、Soc、85:3027 (1963)の方法によってま
たはその方法の明らかな変更によって高収率で製造することができるテオキシリ
ホフラノシルまたはリボフラノシルヌクレオシドである。この方法は、3′−ア
セチルチミジンの酸化反応を記載している。修飾されるヌクレオシドのアセチル
誘導体も、適当な出発物質であることができる。このようなアセチル誘導体は商
業的に入手することができるしまたは当業者に知られている方法を用いて三工程
法で製造してもよい。
このアセチル化法の第一工程は、ヌクレオシドをブロックするための塩化t−ブ
チルジメチルシリル(TBDMSCl )と選択されたヌクレオシドとの反応で
ある0次に、無水酢a(Ac O)を加えた後、B u 4 Fを加えて、選択
されたヌクレオシドの最終のアセチル誘導体を生成する0本発明の好ましい実施
態様により、この三工程法を用いてチミジン(出発物質)を3′−アセチルチミ
ジンに変換する。或いは、市販の3′−アセチルチミジンを利用する。
続いて、3′−アセチルヌクレオシド(14)をDMSO/DCCで処理するこ
とによって酸化した後、1.2−ジアニリノエタンで処理して3′−〇−アセチ
ルー5′−デオキシー5′−(1,3−ジフェニルイミダシリン−2−イル)ヌ
クレオシド(16)を生成する。この保護基は塩基性条件に対して安定であるこ
とが分かったし、そして弱酸を用いて加水分解してアルデヒドに戻すことができ
る。この機能を達成するのに有用な、既存のまたはこれから発見される任意の基
を、本発明の実施にしたかって用いることかて゛きる。好ましい実施態様により
、3′−〇−アセチルー5′−デオキシー5′−(1,3−ジフェニルイミダシ
リン−2−イル)チミジンは、3′−アセチルチミジンをDMSO/DCCで処
理した後、1.2−アニリノエタンで処理することから得られる。
アセチル基の脱プロンキングに続いて、保護されたアルデヒド性ヌクレオシドを
標準法によってホスホルアミダイト(18)に変換する6例えば、アセチル基は
、N H3/’ M e OHを加えた後に、引き続きホスフィチルCIを加え
ることによるホスフィチル化によって除去される。好ましい方法は、2−シアン
エチル−N、N−ジイソプロピルクロロホスホルアミタイトを加えることによる
ホスフィチル化である6例えば、好ましい実施態様により、3′−〇−アセチル
ー5′−デオキシー5′−(1,3−ジフェニルイミダシリン−2−イル)チミ
ジンを脱ブロッキングした後、5′−デオキシ−5′−(ジフェニルイミダゾリ
ン−2−イル)チミジン−2−シアノエチル−N、N−ジイソプロピルホスホル
アミタイトに変換する。
別個に、予め選択された配列を有するホスホロチオエートオリゴヌクレオチドを
、前記で製造されたような特定の修飾ヌクレオシドに対応するヌクレオシドがオ
リゴヌクレオチド配列中に包含される必要がある点まで、固体支持体上で5′方
向に延長する。修飾ヌクレオシドをその天然に存在する末端のヌクレオシド6二
代用して、オリゴヌクレオチド類似体(20)を生じる。最も好ましくは、修飾
チミジンはその天然に存在する対応物を5′末端で置換する。
オリゴヌクレオチド合成法は、便宜上、既知のホスホルアミダイト方法論を用い
る固相状態合成法によってDNA合成iまたはそれ以外で行うことかできる。
核酸合成機は商業的に入手可能であり、概して、それらの使用は、望まれること
がある適度な長さのほとんど全部のオリゴヌクレオチドを生じるのに有効である
と当業者によって理解される。このようなオリゴヌクレオチド鎖は、長さが約5
〜約50核酸塩基であることができる。このような官能基は8〜約40塩基単位
を有するのが更に好ましく、約12〜20塩基単位を用いるのがより一層好まし
い、現在のところ一約15塩基単位を有する万すゴヌクレオチド類似体が、本発
明のある実施態様の実施に最もよいことか分かったと考えられている。
本発明の好ましい実施態様によると、HIVのtat領域は5′方向に延長され
て、配列CCGCCCCTCGCCTCTTGCCTを生じるか、それは、この
領域か、tatタンパク質の発現を阻害するのに最も強力な活性を有すると考え
られるためである。本明細書中に参考として包含される、1990年5月11日
出Hのおよび本発明の譲受人に譲渡された出願番号第521907号明細書を参
照されたい。次に、その配列を、5′末端のTヌクレオチドを考慮するように、
3種類の別のヌクレオチドをTCGCCGCCCCTCGCCTCTTGCCT
に延長するのか好ましい。チミジン残基は前記に記載しなように、ジフェニルイ
ミダゾリニルチミジンで置換された。
得られたホスホルアミタイト結合は、好ましくは、既知のビューケージ(Bea
ucage)試薬二ビューケージ、S、L、ら、J、Am、Chem。
Soc、112:1253〜1254 (1990)]を用いて硫化して、好ま
しいホスホロチオエートを与えることができるしまたはヨウ素によってホスホジ
エステル結合を与えることかできる0例えば、図2のXは酸素または硫黄である
。
窒素含有官能基、好ましくは、末端第一アミン、ヒドラジン、セミカルバジドま
たはチオセミカルバジドを包含するものなどのポリアミンの付加は、好ましくは
、修飾ヌクレオシドがホスホルアミダイトオリゴヌクレオチドに加えられたなら
ば行うことかできる。この付加の第一工程は、オリゴヌクレオチドの5′末端に
加えられた修飾ヌクレオシドのアルデヒド性基の脱保護である。この脱保護は、
修飾ヌクレオシド含有オリゴヌクレオチドを、(合成機中でホスホルアミダイト
オリゴヌクレオチドを結合する)制御細孔ガラス(CPG)支持体上においてT
HF中の3%ジクロロ酢酸(DCA)で処理することによる好ましい実施態様に
よって生じることができる。続いて、CPG支持体上の修飾ヌクレオシド含有オ
リゴヌクレオチドをポリアミンで処理してシップ塩基(イミン)を生成する。シ
ップ塩基は、ナトリウムシアノポロハイドライド(NaCHBH3)を加えるこ
とによってアミンに還元される。最終的に、CPG支持体を水酸化アンモニウム
で処理して脱保護し、そしてポリアミン−オリゴヌクレオチド結合体(22)を
支持体から除去する。
CPG支持体の処理は、DNA合成機によってまたは手動によってシリンジを用
いて行うことかできる1本発明の実施態様に好ましい官能基はポリアミンである
。最も好ましくは、本発明の他の好ましい成分との組み合わせで有用なポリアミ
ン官能基はトリス(アミノブチル)アミンである。このポリアミンは、好ましい
長さゆえに選択された。この基のアミン−炭素結合の長さは、分子模型に基づい
たおよそ15塩基対のオリゴヌクレオチドの長さに及ぶ。
各アミン毎に置かれた炭素スペーサーは、結合したオリゴヌクレオチドのある位
置にポリアミンか存在するように指示するのに有用であることができる。好まし
くは、炭素スペーサーを、炭素スペース基が対称的であるように配列させる。
各アミン毎に置かれた4個の炭素スペーサーは、本発明の好ましい実施態様であ
る。
ポリアミン基の合成は、当該技術分野で知られている方法によって行うことかで
きる。好ましい実施態様に対して、ポリアミン基の合成は、図1に示した工程に
したがって行うことができる。トリス(アミノブチル)アミン(7)または飴の
類似のアミンは、参考として本明細書中に包含される、ニイツ(Niitsu)
およびサメシマ(Samej ima)+ Chem、Pharm、Bu I
I 、34工旦):1032〜1038 (1986)に記載された方法によっ
て合成することができる。このようなアミンは、例えば、ミラーおよびブライタ
マンら、Biochemistr 上6 :1988〜1996 (1977)
に示された、TNDPS−CIおよびEt3Nの付加を必要とする方法にしたが
って、それらの第一アミノ基の一つにt−ブチルジフェニルシリル基を用いて保
護される。得られたt−ブチルジフェニルシリルアミン(8)は修飾オリゴヌク
レオチドとの反応に好都合なアミンである。しかしながら、更に好ましくは、修
飾オリゴヌクレオチドと結合する前に、化合物(8)を、Et2N中の酢酸トリ
フルオロエチルを用いるトリフルオロアセチル化によって更に修飾した後、ピリ
ジニウム水素フッ化物を用いてt−ブチルジフェニルシリル残基を選択的に除去
してTFA保護アミン(10)を与える。この脱保護工程は、オーヴアマン(○
verman)ら、Tetrahedron Lett、27:4391〜43
94 (1986)に記載されている。全工程は、全収率か高い種々のポリアミ
ンの合成法に従う。
記述した参考文献はいずれも参考として本明細書中に包含される。
変法において、ヌクレオシドの5′アルデヒドは、トリフルオロアセチル保護ポ
リアミンと縮合することかできる。ナトリウムシアノボロハイドライドによるシ
ッフ塩基の引き続きの還元および3′位のホスフィチル化は、保護されたポリア
ミンモノマーを与える。この保護ポリアミンモノマーを、DNA合成機によって
オリゴヌクレオチドの5′末端に結合することができる。
ポリアミン−オリゴヌクレオチド結合体のカラムからの脱保護および除去は、カ
ラムを水酸化アンモニウムで処理することによって行うことかできる。最終的に
、組成物は、高速液体クロマトグラフィーおよびゲル電気泳動システムを用いて
精製することができる。このような精製方法は当業者に周知である。
下記の実施例は本発明を例証するものであるが、制限するものではない。
実施例
実施例1
1、 <3′−0−アセチル−1,3−ジフェニルイミダシリン−2−イル)ヌ
クレオシドの製造
標準法によって製造された3′−〇−アセチルチミジン(1,0g)を、DCC
(3,63g)およびDMSO5ml中にH3PO4が0.49gのアリコー)
1.8mlのDMSO(20ml )中撹拌混合物に窒素雰囲気下で加えた。そ
の混合物を室温で一晩中撹拌した。溶媒を除去し、そしで残留物を石油エーテル
と水とに分配した。有機相をストリップし、そして残留物をMeOH(20ml
>中に溶解させた。ジアニリノエタン(0,0047mM、1.0g)を加え
、そして反応を一晩中撹拌して、3′−〇−アセチルー5′−デオキシー5′−
(1゜3−ジフェニルイミダシリン−2−イル)チミジンを生じた。
2、 3−ホスホルアミダイトヌクレオシド3′−〇−アセチルー5′−デオキ
シー5′−(1,3−ジフェニルイミダシリン−2−イル)チミジンを、塩基脱
保護の標準法を用いた後にホスホルアミタイトホスフィチル化を用いて、メタノ
ール性アンモニアで脱アセチル化し、そして2−シアノエチル−N、N−ジイソ
プロピルクロロホスホルアミタイトでホスフィチル化して、5′−デオキシ=5
′−(1,3−ジフェニルイミダゾリン−2−イル)チミジン−2−シアンエチ
ル−N、N−ジイソプロピルクロロホスホルアミダイトを生成する。
3、 オリゴヌクレオチド配列の製造
配列5’ CCGCCCCTCGCCTCTTGCCT3 ′を有する活性HI
Vホスホロチオエートオリゴヌクレオチドのtat領域を、標準的な自動合成法
を用いてABI型380B−I)NA合成機で5′方向に増成した。3種類の更
に別のヌクレオチドを加えてその配列を延長して、5′−チミジン末端配列、す
なわち、末端のチミジンヌクレオチドが5′−デオキシ−5′−(ジフェニルイ
ミダゾリン−2−イル)チミジンで置換した配列5’ TCGCCGCCCCT
CGCCTCTTGCCT3 ′にした。
4、 ポリアミンの製造
トリス(アミノブチル)アミンを、当業者に知られている標準法によって製造す
る。
5、 ポリアミンの付加
実施例1−1の方法のホスホルアミダイト結合オリゴヌクレオチドを、ビューケ
ージ試薬を用いて硫化する、ビューケージ、S、L、ら、J、Am、Chem。
Soc、112:1253〜1254 (1990)、次に、CPG支持体を、
THF中の3%ジクロロ酢酸で処理してアルデヒド性保護基を除去する0次に、
CPG支持体をトリス(トリフルオロアセチル)トリス(アミノブチル)アミン
で引き続き処理して、末端アルデヒドとアミンの間にシッフ塩基を生成する0次
に、ナトリウムシアノボロハイドライド(NaCHBH3)を加えて結合体を還
元してアミンにする。カラムを水酸化アンモニウムで処理して脱保護し且つ結合
体をカラム支持体から除去する。ポリアミン結合体を、ベックマン・ゴールド(
Beckman Gold)高速液体クロマトグラフィーシステムを用いるイオ
ン交換高速液体クロマトグラフィーおよびケル電気泳動によってwI製する。
実施例2
実施例1に示したプロトコルを用いて、パピローマウィルスmRNAキャップ領
域のアンチセンスホスホルアミタイトオリゴヌクレオチドである5’ TATG
CAAGTACAAAT3 ′の合成を行う。
実施例3
実施例1に示したプロトコルを用いて、パピローマウィルス翻訳開始配列のアン
チセンスホスホルアミタイトオリゴヌクレオチドである5’ TCTCCATC
CTCTTCACT3 ′の合成を行う。
実施例4
実施例1に示したプロトコルを用いて、ヘルペスウィルのアンチセンスホスホル
アミダイトオリゴヌクレオチド配列である5’ TCATCCATCCTTCG
GCC3’の合成を行う。
実施例5
実施例1に示したプロトコルを用いて、ヘルペスウィルのアンチセンスホスホル
アミダイトオリゴヌクレオチド配列である5 ′TGGCCATTTCAACA
GA3 ′の合成を行う。
実施例6
実施例1に示したプロトコルを用いて、ヘルペスウィルのアンチセンスホスホル
アミダイトオリゴヌクレオチド配列である5 ′TCATCCATCCGTCC
GCC3′の合成を行う。
実施例7
実施例1に示したプロトコルを用いて、ヘルペスウィルのアンチセンスホスホル
アミダイトオリゴヌクレオチド配列である5′TTGGCCATTGGAACC
AA3′の合成を行う。
8 − 82N(CH2)4NH(CH2)4NH(CH2)4NH−TBDP
SF/GURE/
FIGURE2
国際調査報告
I″m^“1111v 、テ/ll5OI /n&nllAフロントページの続
き
(51) Int、 C1,5識別記号 庁内整理番号Cl2N 15/11
ZNA
I
Claims (39)
- 1.ポリアミンに対する直接結合によって修飾された少なくとも1個のヌクレオ シドを有するオリゴヌクレオチド類似体。
- 2.オリゴヌクレオチド類似体の長さが約5〜約50ヌクレオチド塩基単位であ る請求項1に記載のオリゴヌクレオチド類似体。
- 3.前記のオリゴヌクレオチド類似体がアンチセンス治療薬として有用である請 求項1に記載のオリゴヌクレオチド類似体。
- 4.前記のヌクレオシドがその糖残基の5′位でポリアミンに結合している請求 項1に記載のオリゴヌクレオチド類似体。
- 5.前記のヌクレオシドがチミジンである請求項1に記載のオリゴヌクレオチド 類似体。
- 6.前記のポリアミンがそこに、アミン官能基、ヒドラジン官能基、セミカルバ ジド官能基またはチオセミカルバジド官能基を含む請求項1に記載のオリゴヌク レオチド類似体。
- 7.HIVゲノムのtat領域と特異的にハイブリッド形成しうる選択された配 列を含む請求項1に記載のオリゴヌクレオチド類似体。
- 8.前記の選択された配列がその5′末端にチミジンを有する請求項7に記載の オリゴヌクレオチド類似体。
- 9.ヘルペスゲノムの選択された部分と特異的にハイブリッド形成しうる選択さ れた配列を含む請求項1に記載のオリゴヌクレオチド類似体。
- 10.パピローマゲノムの選択された部分と特異的にハイブリッド形成しうる選 択された配列を含む請求項1に記載のオリゴヌクレオチド類似体。
- 11.前記のポリアミンが構造 H2N(CH2)nNH(CH2)nNH(CH2)nNH−(式中、nは2〜 6の整数である) を有する請求項1に記載のオリゴヌクレオチド類似体。
- 12.nが4である請求項11に記載のオリゴヌクレオチド類似体。
- 13.少なくとも1個のホスホロチオエート基を含む請求項1に記載のオリゴヌ クレオチド類似体。
- 14.少なくとも1個のヌクレオシドが、ポリアミンに対する直接結合によって 修飾されているアンチセンスオリゴヌクレオチド類似体を合成する方法であって 、 約5〜約50ヌクレオチド塩基の選択された配列を有するオリゴヌクレオチドを 、選択された修飾ヌクレオシドが包含されることになっている該配列のある点ま で、固体支持体上において5′方向に延長し;ヌクレオシドを該オリゴヌクレオ チド配列中に包含し;そしてポリアミンを該ヌクレオシドの5′位に直接結合さ せることを含む上記の方法。
- 15.前記のポリアミンを、前記のヌクレオシドが前記のオリゴヌクレオチド中 に包含された後に、前記のヌクレオシドに結合させる請求項14に記載の方法。
- 16.前記のポリアミンを、前記のオリゴヌクレオチド中への前記のヌクレオシ ドの前記の包含の前に、該ヌクレオシドに結合させる請求項14に記載の方法。
- 17.前記のヌクレオシドがチミジンである請求項14に記載の方法。
- 18.前記のポリアミンがそこに、第一アミン官能基、ヒドラジン官能基、セミ カルバジド官能基またはチオセミカルバジド官能基を含む請求項14に記載の方 法。
- 19.前記の製造工程が、前記のヌクレオシドを前記のオリゴヌクレオチドに包 含する前に、前記のヌクレオシド上の保護基を加え;そして前記のポリアミンを 該ヌクレオシドに結合する前に、該ヌクレオシドを脱保護する工程を更に含む請 求項14に記載の方法。
- 20.前記のポリアミンが構造 H2N(CH2)nNH(CH2)nNH(CH2)nNH−(式中、nは2〜 6の整数である) を有する請求項14に記載の方法。
- 21.前記のオリゴヌクレオチドがホスホロチオエートオリゴヌクレオチドであ る請求項14に記載の方法。
- 22.生物によるタンパク質の産生を調節する方法であって、該タンパク質をコ ードする選択された配列と特異的にハイブリッド形成しうる、少なくとも1個の ヌクレオシドがポリアミンに対する直接結合によって修飾されているオリゴヌク レオチド類似体と該生物を接触させることを含む上記の方法。
- 23.オリゴヌクレオチドがホスホロチオエート結合を含む請求項22に記載の 方法。
- 24.オリゴヌクレオチドが約5〜約50ヌクレオチド塩基を含む請求項22に 記載の方法。
- 25.前記のヌクレオシドを、その糖残基の5′位でポリアミンに結合させる請 求項22に記載の方法。
- 26.前記のヌクレオシドがチミジンである請求項22に記載の方法。
- 27.前記のポリアミンがそこに、第一アミン官能基、ヒドラジン官能基、セミ カルバジド官能基またはチオセミカルバジド官能基を含む請求項22に記載の方 法。
- 28.前記のポリアミンが構造 H2N(CH2)nNH(CH2)nNH(CH2)nNH−(式中、nは2〜 6の整数である) を有する請求項22に記載の方法。
- 29.nが4である請求項28に記載の方法。
- 30.疾患を有する生物を治療する方法であって、RNAまたはDNAの選択さ れた配列と特異的にハイブリッド形成しうるオリゴヌクレオチド類似体であって 、その少なくとも1個のヌクレオシドがポリアミンに対する直接結合によって修 飾されているオリゴヌクレオチド類似体と該生物を、単独でかまたは薬学的に許 容しうる担体との組合わせで接触させることを含む上記の方法。
- 31.前記のヌクレオシドを、その糖残基の5′位でポリアミンに結合させる請 求項30に記載の方法。
- 32.前記のヌクレオシドがチミジンである請求項30に記載の方法。
- 33.前記のポリアミンがそこに、第一アミン官能基、ヒドラジン官能基、セミ カルバジド官能基またはチオセミカルバジド官能差を含む請求項30に記載の方 法。
- 34.前記の選択された配列がHIVゲノムのtat領域をコードする請求項3 0に記載の方法。
- 35.前記の選択された配列がその5′末端にチミジンを有する請求項30に記 載の方法。
- 36.前記の選択された配列がヘルペスゲノムの選択された部分をコードする請 求項30に記載の方法。
- 37.前記の選択された配列がパピローマゲノムの選択された部分をコードする 請求項30に記載の方法。
- 38.前記のポリアミンが構造 H2N(CH2)nNH(CH2)nNH(CH2)nNH−(式中、nは2〜 6の整数である) を有する請求項30に記載の方法。
- 39.nが4である請求項38に記載の方法。
Applications Claiming Priority (2)
Application Number | Priority Date | Filing Date | Title |
---|---|---|---|
US07/558,663 US5138045A (en) | 1990-07-27 | 1990-07-27 | Polyamine conjugated oligonucleotides |
US558,663 | 1990-07-27 |
Publications (1)
Publication Number | Publication Date |
---|---|
JPH06500087A true JPH06500087A (ja) | 1994-01-06 |
Family
ID=24230444
Family Applications (1)
Application Number | Title | Priority Date | Filing Date |
---|---|---|---|
JP3513696A Pending JPH06500087A (ja) | 1990-07-27 | 1991-06-10 | 新規のポリアミン結合オリゴヌクレオチド |
Country Status (9)
Country | Link |
---|---|
US (1) | US5138045A (ja) |
EP (1) | EP0544757B1 (ja) |
JP (1) | JPH06500087A (ja) |
AT (1) | ATE159025T1 (ja) |
AU (1) | AU649067B2 (ja) |
BR (1) | BR9106701A (ja) |
CA (1) | CA2087731A1 (ja) |
DE (1) | DE69127903T2 (ja) |
WO (1) | WO1992002531A1 (ja) |
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Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
DE3310337A1 (de) * | 1983-03-22 | 1984-09-27 | Europäisches Laboratorium für Molekularbiologie (EMBL), 6900 Heidelberg | Verfahren zur durchfuehrung von hybridisierungsreaktionen |
EP0406309A4 (en) * | 1988-03-25 | 1992-08-19 | The University Of Virginia Alumni Patents Foundation | Oligonucleotide n-alkylphosphoramidates |
US5166195A (en) * | 1990-05-11 | 1992-11-24 | Isis Pharmaceuticals, Inc. | Antisense inhibitors of the human immunodeficiency virus phosphorothioate oligonucleotides |
AU1245392A (en) * | 1991-02-13 | 1992-09-15 | Austin Research Institute, The | Conjugate molecules |
-
1990
- 1990-07-27 US US07/558,663 patent/US5138045A/en not_active Expired - Lifetime
-
1991
- 1991-06-10 WO PCT/US1991/004086 patent/WO1992002531A1/en active IP Right Grant
- 1991-06-10 CA CA002087731A patent/CA2087731A1/en not_active Abandoned
- 1991-06-10 EP EP91915260A patent/EP0544757B1/en not_active Expired - Lifetime
- 1991-06-10 AU AU84184/91A patent/AU649067B2/en not_active Ceased
- 1991-06-10 BR BR919106701A patent/BR9106701A/pt not_active Application Discontinuation
- 1991-06-10 DE DE69127903T patent/DE69127903T2/de not_active Expired - Fee Related
- 1991-06-10 JP JP3513696A patent/JPH06500087A/ja active Pending
- 1991-06-10 AT AT91915260T patent/ATE159025T1/de not_active IP Right Cessation
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AU8418491A (en) | 1992-03-02 |
US5138045A (en) | 1992-08-11 |
DE69127903T2 (de) | 1998-04-30 |
EP0544757A4 (en) | 1994-07-06 |
DE69127903D1 (de) | 1997-11-13 |
ATE159025T1 (de) | 1997-10-15 |
BR9106701A (pt) | 1993-06-29 |
CA2087731A1 (en) | 1992-01-28 |
AU649067B2 (en) | 1994-05-12 |
EP0544757B1 (en) | 1997-10-08 |
WO1992002531A1 (en) | 1992-02-20 |
EP0544757A1 (en) | 1993-06-09 |
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