RU2013110845A - Пептидомиметические макроциклы - Google Patents

Пептидомиметические макроциклы Download PDF

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RU2013110845A
RU2013110845A RU2013110845/04A RU2013110845A RU2013110845A RU 2013110845 A RU2013110845 A RU 2013110845A RU 2013110845/04 A RU2013110845/04 A RU 2013110845/04A RU 2013110845 A RU2013110845 A RU 2013110845A RU 2013110845 A RU2013110845 A RU 2013110845A
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peptidomimetic macrocycle
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Венсан ГЕРЛАВЭ
Нориюки КАВАХАТА
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Эйлерон Терапьютикс, Инк.
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    • C07KPEPTIDES
    • C07K7/00Peptides having 5 to 20 amino acids in a fully defined sequence; Derivatives thereof
    • C07K7/50Cyclic peptides containing at least one abnormal peptide link
    • C07K7/52Cyclic peptides containing at least one abnormal peptide link with only normal peptide links in the ring
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    • A61K38/12Cyclic peptides, e.g. bacitracins; Polymyxins; Gramicidins S, C; Tyrocidins A, B or C
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Abstract

1. Пептидомиметический макроцикл, содержащий аминокислотную последовательность, которая, по меньшей мере, примерно на 60% идентична аминокислотной последовательности, выбранной из группы, включающей в себя аминокислотные последовательности, приведенные в таблице 1, 2, 3 или 4.2. Пептидомиметический макроцикл по п.1, где аминокислотная последовательность указанного пептидомиметического макроцикла, по меньшей мере, примерно на 60% идентична аминокислотной последовательности, выбранной из группы, включающей в себя аминокислотные последовательности, приведенные в таблице 1, 2, 3 или 4, причем макроцикл не содержит триазол или тиоэфир.3. Пептидомиметический макроцикл по п.1, где аминокислотная последовательность указанного пептидомиметического макроцикла, по меньшей мере, примерно на 80% идентична аминокислотной последовательности, выбранной из группы, включающей в себя аминокислотные последовательности, приведенные в таблице 1, 2, 3 или 4.4. Пептидомиметический макроцикл по п.1, где аминокислотная последовательность указанного пептидомиметического макроцикла, по меньшей мере, примерно на 90% идентична аминокислотной последовательности, выбранной из группы, включающей в себя аминокислотные последовательности, приведенные в таблице 1, 2, 3 или 4.5. Пептидомиметический макроцикл по п.1, где аминокислотная последовательность указанного пептидомиметического макроцикла выбрана из группы, включающей в себя аминокислотные последовательности, приведенные в таблице 1, 2, 3 или 4.6. Пептидомиметический макроцикл по п.1, где пептидомиметический макроцикл содержит спираль.7. Пептидомиметический макроцикл по п.1, где пептидомиметическ�

Claims (24)

1. Пептидомиметический макроцикл, содержащий аминокислотную последовательность, которая, по меньшей мере, примерно на 60% идентична аминокислотной последовательности, выбранной из группы, включающей в себя аминокислотные последовательности, приведенные в таблице 1, 2, 3 или 4.
2. Пептидомиметический макроцикл по п.1, где аминокислотная последовательность указанного пептидомиметического макроцикла, по меньшей мере, примерно на 60% идентична аминокислотной последовательности, выбранной из группы, включающей в себя аминокислотные последовательности, приведенные в таблице 1, 2, 3 или 4, причем макроцикл не содержит триазол или тиоэфир.
3. Пептидомиметический макроцикл по п.1, где аминокислотная последовательность указанного пептидомиметического макроцикла, по меньшей мере, примерно на 80% идентична аминокислотной последовательности, выбранной из группы, включающей в себя аминокислотные последовательности, приведенные в таблице 1, 2, 3 или 4.
4. Пептидомиметический макроцикл по п.1, где аминокислотная последовательность указанного пептидомиметического макроцикла, по меньшей мере, примерно на 90% идентична аминокислотной последовательности, выбранной из группы, включающей в себя аминокислотные последовательности, приведенные в таблице 1, 2, 3 или 4.
5. Пептидомиметический макроцикл по п.1, где аминокислотная последовательность указанного пептидомиметического макроцикла выбрана из группы, включающей в себя аминокислотные последовательности, приведенные в таблице 1, 2, 3 или 4.
6. Пептидомиметический макроцикл по п.1, где пептидомиметический макроцикл содержит спираль.
7. Пептидомиметический макроцикл по п.1, где пептидомиметический макроцикл содержит α-спираль.
8. Пептидомиметический макроцикл по п.1, где пептидомиметический макроцикл содержит α,α-дизамещенную аминокислоту.
9. Пептидомиметический макроцикл по п.1, где пептидомиметический макроцикл содержит поперечный линкер, соединяющий α-положения, по меньшей мере, двух аминокислот.
10. Пептидомиметический макроцикл по п.9, где, по меньшей мере, одна из двух указанных аминокислот представляет собой α,α-дизамещенную аминокислоту.
11. Пептидомиметический макроцикл по любому из пп.1-10, где пептидомиметический макроцикл имеет формулу:
Figure 00000001
Формула I
где:
каждый A, C, D и E независимо обозначает природную или неприродную аминокислоту, а D и E независимо и необязательно содержат кэпирующую группу;
B представляет собой природную или неприродную аминокислоту, аналог аминокислоты,
Figure 00000002
, [-NH-L3-CO-], [-NH-L3-SO2-] или [-NH-L3-];
R1 и R2 независимо обозначают -H, алкил, алкенил, алкинил, арилалкил, циклоалкил, циклоалкилалкил, гетероалкил или гетероциклоалкил, незамещенный или замещенный галогеном;
R3 обозначает водород, алкил, алкенил, алкинил, арилалкил, гетероалкил, циклоалкил, гетероциклоалкил, циклоалкилалкил, циклоарил или гетероциклоарил, необязательно замещенный R5;
L обозначает макроцикл-образующий линкер формулы -L1-L2-;
L1 и L2 независимо обозначают алкилен, алкенилен, алкинилен, гетероалкилен, циклоалкилен, гетероциклоалкилен, циклоарилен, гетероциклоарилен или [-R4-K-R4-]n, каждый из которых необязательно замещен R5;
каждый R4 обозначает алкилен, алкенилен, алкинилен, гетероалкилен, циклоалкилен, гетероциклоалкилен, арилен или гетероарилен;
каждый K обозначает O, S, SO, SO2, CO, CO2 или CONR3;
каждый R5 независимо обозначает галоген, алкил, -OR6, -N(R6)2, -SR6, -SOR6, -SO2R6, -CO2R6, флуоресцентный фрагмент, радиоизотоп или терапевтическое средство;
каждый R6 независимо обозначает -H, алкил, алкенил, алкинил, арилалкил, циклоалкилалкил, гетероциклоалкил, флуоресцентный фрагмент, радиоизотоп или терапевтическое средство;
R7 обозначает -H, алкил, алкенил, алкинил, арилалкил, циклоалкил, гетероалкил, циклоалкилалкил, гетероциклоалкил, циклоарил или гетероциклоарил, необязательно замещенный R5, или часть циклической структуры, содержащую остаток D;
R8 обозначает -H, алкил, алкенил, алкинил, арилалкил, циклоалкил, гетероалкил, циклоалкилалкил, гетероциклоалкил, циклоарил или гетероциклоарил, необязательно замещенный R5, или часть циклической структуры, содержащую остаток E;
v и w независимо обозначают целые числа в диапазоне 1-1000;
u обозначает целое число в диапазоне 1-10;
x, y и z независимо обозначают целые числа в диапазоне 0-10; и
n обозначает целое число в диапазоне 1-5.
12. Пептидомиметический макроцикл по п.11, где L не содержит тиоэфир или триазол.
13. Пептидомиметический макроцикл по п.1, где пептидомиметический макроцикл содержит поперечный линкер, соединяющий скелетную аминогруппу первой аминокислоты со второй аминокислотой, входящей в состав пептидомиметического макроцикла.
14. Пептидомиметический макроцикл по п.13, где пептидомиметический макроцикл имеет формулу (IV) или (IVa):
Figure 00000003
Формула (IV)
Figure 00000004
Формула (IVa)
где:
каждый A, C, D и E независимо обозначает природную или неприродную аминокислоту, а D и E независимо и необязательно содержат кэпирующую группу;
B обозначает природную или неприродную аминокислоту, аналог аминокислоты,
Figure 00000002
, [-NH-L3-CO-], [-NH-L3-SO2-] или [-NH-L3-];
R1 и R2 независимо обозначают -H, алкил, алкенил, алкинил, арилалкил, циклоалкил, циклоалкилалкил, гетероалкил или гетероциклоалкил, незамещенный или замещенный галогеном, или часть циклической структуры, содержащей остаток E;
R3 обозначает водород, алкил, алкенил, алкинил, арилалкил, гетероалкил, циклоалкил, гетероциклоалкил, циклоалкилалкил, циклоарил или гетероциклоарил, необязательно замещенный R5;
L1 и L2 независимо обозначают алкилен, алкенилен, алкинилен, гетероалкилен, циклоалкилен, гетероциклоалкилен, циклоарилен, гетероциклоарилен или [-R4-K-R4-]n, каждый из которых необязательно замещен R5;
каждый R4 обозначает алкилен, алкенилен, алкинилен, гетероалкилен, циклоалкилен, гетероциклоалкилен, арилен или гетероарилен;
каждый K обозначает O, S, SO, SO2, CO, CO2 или CONR3;
каждый R5 независимо обозначает галоген, алкил, -OR6, -N(R6)2, -SR6, -SOR6, -SO2R6, -CO2R6, флуоресцентный фрагмент, радиоизотоп или терапевтическое средство;
каждый R6 независимо обозначает -H, алкил, алкенил, алкинил, арилалкил, циклоалкилалкил, гетероциклоалкил, флуоресцентный фрагмент, радиоизотоп или терапевтическое средство;
R7 обозначает -H, алкил, алкенил, алкинил, арилалкил, циклоалкил, гетероалкил, циклоалкилалкил, гетероциклоалкил, циклоарил или гетероциклоарил, необязательно замещенный R5;
v и w независимо обозначают целые числа в диапазоне 1-1000;
u обозначает целое число в диапазоне 1-10;
x, y и z независимо обозначают целые числа в диапазоне 0-10; и
n обозначает целое число в диапазоне 1-5.
15. Пептидомиметический макроцикл по п.14, где L1 и L2 по отдельности или в сочетании не содержат тиоэфир или триазол.
16. Пептидомиметический макроцикл по п.11, где L1 и L2 независимо обозначают алкилен, алкенилен или алкинилен.
17. Пептидомиметический макроцикл по п.11, где L1 и L2 независимо обозначают C3-C10 алкилен или алкенилен.
18. Пептидомиметический макроцикл по п.17, где L1 и L2 независимо обозначают C3-C6 алкилен или алкенилен.
19. Пептидомиметический макроцикл по п.11, где R1 и R2 обозначают H.
20. Пептидомиметический макроцикл по п.11, где R1 и R2 независимо обозначают алкил.
21. Пептидомиметический макроцикл по п.11, где R1 и R2 обозначают метил.
22. Способ лечения рака у субъекта, включающий в себя введение субъекту пептидомиметического макроцикла по п.1.
23. Способ модуляции активности p53 и/или HDM2 и/или HDMX у субъекта, включающий в себя введение субъекту пептидомиметического макроцикла по п.1.
24. Способ препятствования взаимодействию белков p53 и HDM2 и/или p53 и HDMX у субъекта, включающий в себя введение субъекту пептидомиметического макроцикла по п.1.
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