JP3681729B2 - 塩基置換の検出方法 - Google Patents

塩基置換の検出方法 Download PDF

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Publication number
JP3681729B2
JP3681729B2 JP2002565143A JP2002565143A JP3681729B2 JP 3681729 B2 JP3681729 B2 JP 3681729B2 JP 2002565143 A JP2002565143 A JP 2002565143A JP 2002565143 A JP2002565143 A JP 2002565143A JP 3681729 B2 JP3681729 B2 JP 3681729B2
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nucleotide
base
nucleic acid
detecting
base substitution
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JPWO2002064833A1 (ja
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裕章 佐川
英二 小林
郁之進 加藤
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Takara Bio Inc
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Takara Bio Inc
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    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6813Hybridisation assays
    • C12Q1/6827Hybridisation assays for detection of mutation or polymorphism
    • C12Q1/683Hybridisation assays for detection of mutation or polymorphism involving restriction enzymes, e.g. restriction fragment length polymorphism [RFLP]

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  • Chemical & Material Sciences (AREA)
  • Organic Chemistry (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Zoology (AREA)
  • Wood Science & Technology (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Health & Medical Sciences (AREA)
  • Engineering & Computer Science (AREA)
  • Microbiology (AREA)
  • Immunology (AREA)
  • Physics & Mathematics (AREA)
  • Molecular Biology (AREA)
  • Biotechnology (AREA)
  • Biophysics (AREA)
  • Analytical Chemistry (AREA)
  • Biochemistry (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • General Engineering & Computer Science (AREA)
  • General Health & Medical Sciences (AREA)
  • Genetics & Genomics (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
JP2002565143A 2001-02-15 2002-02-14 塩基置換の検出方法 Expired - Fee Related JP3681729B2 (ja)

Applications Claiming Priority (15)

Application Number Priority Date Filing Date Title
JP2001039268 2001-02-15
JP2001039268 2001-02-15
JP2001040721 2001-02-16
JP2001040721 2001-02-16
JP2001101055 2001-03-30
JP2001101055 2001-03-30
JP2001177381 2001-06-12
JP2001177381 2001-06-12
JP2001290384 2001-09-25
JP2001290384 2001-09-25
JP2001338440 2001-11-02
JP2001338440 2001-11-02
JP2001368929 2001-12-03
JP2001368929 2001-12-03
PCT/JP2002/001222 WO2002064833A1 (en) 2001-02-15 2002-02-14 Method of detecting nucleotide polymorphism

Related Child Applications (1)

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JP2004221749A Division JP2004298200A (ja) 2001-02-15 2004-07-29 塩基置換の検出方法

Publications (2)

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JPWO2002064833A1 JPWO2002064833A1 (ja) 2004-06-17
JP3681729B2 true JP3681729B2 (ja) 2005-08-10

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JP2002565143A Expired - Fee Related JP3681729B2 (ja) 2001-02-15 2002-02-14 塩基置換の検出方法
JP2004221749A Pending JP2004298200A (ja) 2001-02-15 2004-07-29 塩基置換の検出方法
JP2005144399A Pending JP2005245465A (ja) 2001-02-15 2005-05-17 塩基置換の検出方法

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JP2004221749A Pending JP2004298200A (ja) 2001-02-15 2004-07-29 塩基置換の検出方法
JP2005144399A Pending JP2005245465A (ja) 2001-02-15 2005-05-17 塩基置換の検出方法

Country Status (9)

Country Link
US (1) US7135291B2 (https=)
EP (1) EP1367136A4 (https=)
JP (3) JP3681729B2 (https=)
KR (1) KR100809949B1 (https=)
CN (1) CN100351393C (https=)
AU (1) AU2002232177B2 (https=)
CA (1) CA2438574C (https=)
EA (1) EA005141B1 (https=)
WO (1) WO2002064833A1 (https=)

Families Citing this family (24)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
TW200404889A (en) * 2002-05-31 2004-04-01 Takara Bio Inc Method of typing gene polymorphisms
DK2302070T3 (da) * 2005-06-23 2012-11-26 Keygene Nv Strategier til identifikation og detektion af polymorfismer med højt gennemløb
EP2644708B1 (en) 2008-04-30 2014-12-17 Integrated Dna Technologies, Inc. RNASE-H-based assays utilizing modified RNA monomers
US8911948B2 (en) 2008-04-30 2014-12-16 Integrated Dna Technologies, Inc. RNase H-based assays utilizing modified RNA monomers
US10227641B2 (en) 2008-04-30 2019-03-12 Integrated Dna Technologies, Inc. RNase H-based assays utilizing modified RNA monomers
EP2333109B1 (en) * 2008-09-03 2013-08-07 Takara Bio, Inc. Composition for detection of rna
CN105200097A (zh) * 2008-10-20 2015-12-30 霍夫曼-拉罗奇有限公司 改进的等位基因特异性扩增
US20110117559A1 (en) * 2009-11-13 2011-05-19 Integrated Dna Technologies, Inc. Small rna detection assays
US9238832B2 (en) 2009-12-11 2016-01-19 Roche Molecular Systems, Inc. Allele-specific amplification of nucleic acids
US8614071B2 (en) 2009-12-11 2013-12-24 Roche Molecular Systems, Inc. Preferential amplification of mRNA over DNA using chemically modified primers
WO2012135053A2 (en) 2011-03-25 2012-10-04 Integrated Dna Technologies, Inc. Rnase h-based assays utilizing modified rna monomers
WO2013123238A1 (en) 2012-02-14 2013-08-22 Great Basin Scientific Methods of isothermal amplification using blocked primers
JP6009649B2 (ja) 2013-03-14 2016-10-19 タカラバイオ株式会社 耐熱性のミスマッチエンドヌクレアーゼの利用方法
CA2906365A1 (en) * 2013-03-15 2014-09-18 Integrated Dna Technologies, Inc. Rnase h-based assays utilizing modified rna monomers
JP2016536995A (ja) 2013-11-14 2016-12-01 インテグレイテツド・デイー・エヌ・エイ・テクノロジーズ・インコーポレイテツド 増大した鋳型識別活性を有するdnaポリメラーゼ突然変異体
CA2951514C (en) 2014-06-18 2025-09-09 Clear Gene, Inc. METHODS, COMPOSITIONS AND DEVICES FOR THE RAPID ANALYSIS OF BIOLOGICAL MARKERS
KR20170053636A (ko) 2014-09-11 2017-05-16 다카라 바이오 가부시키가이샤 내열성의 미스매치 엔도뉴클레아제의 이용방법
US9909169B2 (en) 2014-12-17 2018-03-06 Roche Molecular Systems, Inc. Allele-specific amplification of nucleic acids using blocking oligonucleotides for wild type suppression
EP3272865A4 (en) * 2015-03-20 2018-10-17 Takara Bio Inc. High-sensitivity method for detecting target nucleic acid
CA3008273A1 (en) 2015-12-18 2017-06-22 Clear Gene, Inc. Methods, compositions, kits and devices for rapid analysis of biological markers
US12275994B2 (en) 2017-06-22 2025-04-15 Clear Gene, Inc. Methods and compositions for the analysis of cancer biomarkers
CN108148895A (zh) * 2017-12-29 2018-06-12 星阵(广州)基因科技有限公司 用于检测突变的人akt1基因的引物、试剂盒及方法
AU2022216246A1 (en) * 2021-02-02 2023-09-14 Rhodx, Inc. Synthetic polynucleotides and methods for selectively amplifying alleles
CN113215163B (zh) * 2021-05-12 2023-05-12 苏州海苗生物科技有限公司 一种特异性扩增目的基因的分子锁及应用

Family Cites Families (30)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US4521509A (en) * 1982-11-24 1985-06-04 Research Corporation Method for degrading DNA
US4683202A (en) 1985-03-28 1987-07-28 Cetus Corporation Process for amplifying nucleic acid sequences
US4683195A (en) 1986-01-30 1987-07-28 Cetus Corporation Process for amplifying, detecting, and/or-cloning nucleic acid sequences
US5011769A (en) 1985-12-05 1991-04-30 Meiogenics U.S. Limited Partnership Methods for detecting nucleic acid sequences
US4876187A (en) 1985-12-05 1989-10-24 Meiogenics, Inc. Nucleic acid compositions with scissile linkage useful for detecting nucleic acid sequences
US4800159A (en) 1986-02-07 1989-01-24 Cetus Corporation Process for amplifying, detecting, and/or cloning nucleic acid sequences
CA1340807C (en) 1988-02-24 1999-11-02 Lawrence T. Malek Nucleic acid amplification process
JP2650159B2 (ja) 1988-02-24 1997-09-03 アクゾ・ノベル・エヌ・ベー 核酸増幅方法
US5639611A (en) * 1988-12-12 1997-06-17 City Of Hope Allele specific polymerase chain reaction
US5137806A (en) * 1989-12-11 1992-08-11 Board Of Regents, The University Of Texas System Methods and compositions for the detection of sequences in selected DNA molecules
US5210015A (en) * 1990-08-06 1993-05-11 Hoffman-La Roche Inc. Homogeneous assay system using the nuclease activity of a nucleic acid polymerase
US5455166A (en) 1991-01-31 1995-10-03 Becton, Dickinson And Company Strand displacement amplification
US5846717A (en) 1996-01-24 1998-12-08 Third Wave Technologies, Inc. Detection of nucleic acid sequences by invader-directed cleavage
WO1995014106A2 (en) 1993-11-17 1995-05-26 Id Biomedical Corporation Cycling probe cleavage detection of nucleic acid sequences
EP0705905B1 (de) 1994-07-16 2001-10-10 Roche Diagnostics GmbH Verfahren zum sensitiven Nachweis von Nukleinsäuren
ATE414793T1 (de) * 1996-01-24 2008-12-15 Third Wave Tech Inc Invasive spaltung von nukleinsäuren
NL1002427C2 (nl) * 1996-02-23 1997-08-26 Akzo Nobel Nv Bekledingssamenstelling omvattende een bicyclo- of spiroorthoester functionele verbinding.
US5808108A (en) * 1997-01-15 1998-09-15 Chappelow; Cecil C. Polymeric compositions and composites prepared from spiroorthocarbonates and epoxy monomers
DE19733619C1 (de) * 1997-08-04 2000-02-24 Markus Schuermann CASE-PCR, ein hochselektives Verfahren zum Nachweis von Onkogenmutationen und Allelvarianten
ATE362532T1 (de) 1999-03-19 2007-06-15 Takara Bio Inc Verfahren zur amplifizierung einer nukleinsäuresequenz unter verwendung eines chimären primers
GB9915200D0 (en) * 1999-06-29 1999-09-01 Janssen Pharmaceutica Nv Neurotrophic factor receptor
DE60029225T2 (de) 1999-07-02 2007-07-05 Invitrogen Corp., Carlsbad Zusammensetzungen und verfahren zu höhere empfindlichkeit und spezifität von nukleinsäuresynthese
GB9918150D0 (en) 1999-08-03 1999-10-06 Univ Sheffield Nuclease variant
US6274353B1 (en) 1999-09-22 2001-08-14 Genecopoeia, Inc. Method and compositions for improved polynucleotide synthesis
JP2001136965A (ja) * 1999-11-12 2001-05-22 Takara Shuzo Co Ltd 核酸配列の増幅方法
JP3937136B2 (ja) 1999-12-10 2007-06-27 東洋紡績株式会社 塩基多型の検出方法
CA2412721A1 (en) 2000-06-26 2002-01-03 Nugen Technologies, Inc. Methods and compositions for transcription-based nucleic acid amplification
US6773885B1 (en) * 2000-09-29 2004-08-10 Integrated Dna Technologies, Inc. Compositions and methods for visual ribonuclease detection assays
WO2002063049A2 (en) * 2001-02-02 2002-08-15 Genome Therapeutics Corporation Methods for determining a nucleotide at a specific location within a nucleic acid molecule
DE60235491D1 (de) * 2001-11-28 2010-04-08 Bio Rad Laboratories Paralleles scoring von polymorphismen mittels amplifikation und fehlerkorrektur

Also Published As

Publication number Publication date
JP2005245465A (ja) 2005-09-15
US20040137451A1 (en) 2004-07-15
KR20030074797A (ko) 2003-09-19
CA2438574A1 (en) 2002-08-22
CN100351393C (zh) 2007-11-28
WO2002064833A1 (en) 2002-08-22
US7135291B2 (en) 2006-11-14
JP2004298200A (ja) 2004-10-28
EP1367136A1 (en) 2003-12-03
EP1367136A4 (en) 2005-01-12
EA005141B1 (ru) 2004-12-30
KR100809949B1 (ko) 2008-03-06
JPWO2002064833A1 (ja) 2004-06-17
CA2438574C (en) 2009-08-11
CN1524127A (zh) 2004-08-25
EA200300880A1 (ru) 2004-02-26
AU2002232177B2 (en) 2006-11-09

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