JP3681729B2 - 塩基置換の検出方法 - Google Patents

塩基置換の検出方法 Download PDF

Info

Publication number
JP3681729B2
JP3681729B2 JP2002565143A JP2002565143A JP3681729B2 JP 3681729 B2 JP3681729 B2 JP 3681729B2 JP 2002565143 A JP2002565143 A JP 2002565143A JP 2002565143 A JP2002565143 A JP 2002565143A JP 3681729 B2 JP3681729 B2 JP 3681729B2
Authority
JP
Japan
Prior art keywords
nucleotide
base
nucleic acid
detecting
base substitution
Prior art date
Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
Expired - Fee Related
Application number
JP2002565143A
Other languages
English (en)
Japanese (ja)
Other versions
JPWO2002064833A1 (ja
Inventor
裕章 佐川
英二 小林
郁之進 加藤
Current Assignee (The listed assignees may be inaccurate. Google has not performed a legal analysis and makes no representation or warranty as to the accuracy of the list.)
Takara Bio Inc
Original Assignee
Takara Bio Inc
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Takara Bio Inc filed Critical Takara Bio Inc
Publication of JPWO2002064833A1 publication Critical patent/JPWO2002064833A1/ja
Application granted granted Critical
Publication of JP3681729B2 publication Critical patent/JP3681729B2/ja
Anticipated expiration legal-status Critical
Expired - Fee Related legal-status Critical Current

Links

Images

Classifications

    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6813Hybridisation assays
    • C12Q1/6827Hybridisation assays for detection of mutation or polymorphism
    • C12Q1/683Hybridisation assays for detection of mutation or polymorphism involving restriction enzymes, e.g. restriction fragment length polymorphism [RFLP]

Landscapes

  • Chemical & Material Sciences (AREA)
  • Organic Chemistry (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Zoology (AREA)
  • Wood Science & Technology (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Health & Medical Sciences (AREA)
  • Engineering & Computer Science (AREA)
  • Microbiology (AREA)
  • Immunology (AREA)
  • Physics & Mathematics (AREA)
  • Molecular Biology (AREA)
  • Biotechnology (AREA)
  • Biophysics (AREA)
  • Analytical Chemistry (AREA)
  • Biochemistry (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • General Engineering & Computer Science (AREA)
  • General Health & Medical Sciences (AREA)
  • Genetics & Genomics (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
JP2002565143A 2001-02-15 2002-02-14 塩基置換の検出方法 Expired - Fee Related JP3681729B2 (ja)

Applications Claiming Priority (15)

Application Number Priority Date Filing Date Title
JP2001039268 2001-02-15
JP2001039268 2001-02-15
JP2001040721 2001-02-16
JP2001040721 2001-02-16
JP2001101055 2001-03-30
JP2001101055 2001-03-30
JP2001177381 2001-06-12
JP2001177381 2001-06-12
JP2001290384 2001-09-25
JP2001290384 2001-09-25
JP2001338440 2001-11-02
JP2001338440 2001-11-02
JP2001368929 2001-12-03
JP2001368929 2001-12-03
PCT/JP2002/001222 WO2002064833A1 (en) 2001-02-15 2002-02-14 Method of detecting nucleotide polymorphism

Related Child Applications (1)

Application Number Title Priority Date Filing Date
JP2004221749A Division JP2004298200A (ja) 2001-02-15 2004-07-29 塩基置換の検出方法

Publications (2)

Publication Number Publication Date
JPWO2002064833A1 JPWO2002064833A1 (ja) 2004-06-17
JP3681729B2 true JP3681729B2 (ja) 2005-08-10

Family

ID=27567022

Family Applications (3)

Application Number Title Priority Date Filing Date
JP2002565143A Expired - Fee Related JP3681729B2 (ja) 2001-02-15 2002-02-14 塩基置換の検出方法
JP2004221749A Pending JP2004298200A (ja) 2001-02-15 2004-07-29 塩基置換の検出方法
JP2005144399A Pending JP2005245465A (ja) 2001-02-15 2005-05-17 塩基置換の検出方法

Family Applications After (2)

Application Number Title Priority Date Filing Date
JP2004221749A Pending JP2004298200A (ja) 2001-02-15 2004-07-29 塩基置換の検出方法
JP2005144399A Pending JP2005245465A (ja) 2001-02-15 2005-05-17 塩基置換の検出方法

Country Status (9)

Country Link
US (1) US7135291B2 (enExample)
EP (1) EP1367136A4 (enExample)
JP (3) JP3681729B2 (enExample)
KR (1) KR100809949B1 (enExample)
CN (1) CN100351393C (enExample)
AU (1) AU2002232177B2 (enExample)
CA (1) CA2438574C (enExample)
EA (1) EA005141B1 (enExample)
WO (1) WO2002064833A1 (enExample)

Families Citing this family (24)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
TW200404889A (en) * 2002-05-31 2004-04-01 Takara Bio Inc Method of typing gene polymorphisms
WO2006137733A1 (en) * 2005-06-23 2006-12-28 Keygene N.V. Strategies for high throughput identification and detection of polymorphisms
EP2644707B1 (en) * 2008-04-30 2015-06-03 Integrated Dna Technologies, Inc. RNase-H-based assays utilizing modified RNA monomers
WO2014143228A1 (en) * 2013-03-15 2014-09-18 Integrated Dna Technologies, Inc. Rnase h-based assays utilizing modified rna monomers
US10227641B2 (en) 2008-04-30 2019-03-12 Integrated Dna Technologies, Inc. RNase H-based assays utilizing modified RNA monomers
US8911948B2 (en) 2008-04-30 2014-12-16 Integrated Dna Technologies, Inc. RNase H-based assays utilizing modified RNA monomers
WO2010026933A1 (ja) * 2008-09-03 2010-03-11 タカラバイオ株式会社 Rna検出用組成物
EP2337865B1 (en) * 2008-10-20 2014-11-19 Roche Diagnostics GmbH Allele-specific amplification using a primer with a modified nucleotide
WO2011060014A1 (en) * 2009-11-13 2011-05-19 Integrated Dna Technologies, Inc. Small rna detection assays
US8614071B2 (en) 2009-12-11 2013-12-24 Roche Molecular Systems, Inc. Preferential amplification of mRNA over DNA using chemically modified primers
US9238832B2 (en) 2009-12-11 2016-01-19 Roche Molecular Systems, Inc. Allele-specific amplification of nucleic acids
WO2012135053A2 (en) 2011-03-25 2012-10-04 Integrated Dna Technologies, Inc. Rnase h-based assays utilizing modified rna monomers
WO2013123238A1 (en) 2012-02-14 2013-08-22 Great Basin Scientific Methods of isothermal amplification using blocked primers
KR102126744B1 (ko) 2013-03-14 2020-06-26 다카라 바이오 가부시키가이샤 내열성 미스매치 엔도뉴클레아제의 이용방법
CA2930595C (en) 2013-11-14 2023-09-19 Integrated Dna Technologies, Inc. Dna polymerase mutants having enhanced template discrimination activity
EP3825411A1 (en) 2014-06-18 2021-05-26 Clear Gene, Inc. Methods, compositions, and devices for rapid analysis of biological markers
KR20170053636A (ko) 2014-09-11 2017-05-16 다카라 바이오 가부시키가이샤 내열성의 미스매치 엔도뉴클레아제의 이용방법
US9909169B2 (en) 2014-12-17 2018-03-06 Roche Molecular Systems, Inc. Allele-specific amplification of nucleic acids using blocking oligonucleotides for wild type suppression
JP6914831B2 (ja) * 2015-03-20 2021-08-04 タカラバイオ株式会社 標的核酸の高感度検出方法
US11401558B2 (en) 2015-12-18 2022-08-02 Clear Gene, Inc. Methods, compositions, kits and devices for rapid analysis of biological markers
US12275994B2 (en) 2017-06-22 2025-04-15 Clear Gene, Inc. Methods and compositions for the analysis of cancer biomarkers
CN108148895A (zh) * 2017-12-29 2018-06-12 星阵(广州)基因科技有限公司 用于检测突变的人akt1基因的引物、试剂盒及方法
WO2022169846A1 (en) * 2021-02-02 2022-08-11 Rhodx, Inc. Synthetic polynucleotides and methods for selectively amplifying alleles
CN113215163B (zh) * 2021-05-12 2023-05-12 苏州海苗生物科技有限公司 一种特异性扩增目的基因的分子锁及应用

Family Cites Families (30)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US4521509A (en) 1982-11-24 1985-06-04 Research Corporation Method for degrading DNA
US4683195A (en) 1986-01-30 1987-07-28 Cetus Corporation Process for amplifying, detecting, and/or-cloning nucleic acid sequences
US4683202A (en) 1985-03-28 1987-07-28 Cetus Corporation Process for amplifying nucleic acid sequences
US5011769A (en) 1985-12-05 1991-04-30 Meiogenics U.S. Limited Partnership Methods for detecting nucleic acid sequences
US4876187A (en) 1985-12-05 1989-10-24 Meiogenics, Inc. Nucleic acid compositions with scissile linkage useful for detecting nucleic acid sequences
US4800159A (en) 1986-02-07 1989-01-24 Cetus Corporation Process for amplifying, detecting, and/or cloning nucleic acid sequences
CA1340807C (en) 1988-02-24 1999-11-02 Lawrence T. Malek Nucleic acid amplification process
JP2650159B2 (ja) 1988-02-24 1997-09-03 アクゾ・ノベル・エヌ・ベー 核酸増幅方法
US5639611A (en) * 1988-12-12 1997-06-17 City Of Hope Allele specific polymerase chain reaction
US5137806A (en) 1989-12-11 1992-08-11 Board Of Regents, The University Of Texas System Methods and compositions for the detection of sequences in selected DNA molecules
US5210015A (en) 1990-08-06 1993-05-11 Hoffman-La Roche Inc. Homogeneous assay system using the nuclease activity of a nucleic acid polymerase
US5455166A (en) 1991-01-31 1995-10-03 Becton, Dickinson And Company Strand displacement amplification
US5846717A (en) 1996-01-24 1998-12-08 Third Wave Technologies, Inc. Detection of nucleic acid sequences by invader-directed cleavage
WO1995014106A2 (en) * 1993-11-17 1995-05-26 Id Biomedical Corporation Cycling probe cleavage detection of nucleic acid sequences
ATE206764T1 (de) 1994-07-16 2001-10-15 Roche Diagnostics Gmbh Verfahren zum sensitiven nachweis von nukleinsäuren
CA2243353C (en) * 1996-01-24 2010-03-30 Third Wave Technologies, Inc. Invasive cleavage of nucleic acids
NL1002427C2 (nl) * 1996-02-23 1997-08-26 Akzo Nobel Nv Bekledingssamenstelling omvattende een bicyclo- of spiroorthoester functionele verbinding.
US5808108A (en) * 1997-01-15 1998-09-15 Chappelow; Cecil C. Polymeric compositions and composites prepared from spiroorthocarbonates and epoxy monomers
DE19733619C1 (de) 1997-08-04 2000-02-24 Markus Schuermann CASE-PCR, ein hochselektives Verfahren zum Nachweis von Onkogenmutationen und Allelvarianten
EA004327B1 (ru) 1999-03-19 2004-04-29 Такара Био. Инк. Способ амплификации последовательности нуклеиновой кислоты
GB9915200D0 (en) * 1999-06-29 1999-09-01 Janssen Pharmaceutica Nv Neurotrophic factor receptor
CA2377780A1 (en) 1999-07-02 2001-01-11 Invitrogen Corporation Compositions and methods for enhanced sensitivity and specificity of nucleic acid synthesis
GB9918150D0 (en) 1999-08-03 1999-10-06 Univ Sheffield Nuclease variant
US6274353B1 (en) 1999-09-22 2001-08-14 Genecopoeia, Inc. Method and compositions for improved polynucleotide synthesis
JP2001136965A (ja) 1999-11-12 2001-05-22 Takara Shuzo Co Ltd 核酸配列の増幅方法
EP1241266A4 (en) 1999-12-10 2004-11-17 Toyo Boseki METHOD FOR DETECTING NUCLEIC ACID POLYMORPHISMS
DE60141087D1 (de) 2000-06-26 2010-03-04 Nugen Technologies Inc Methoden und zusammensetzungen zur auf transkription basierenden vervielfältigung von nukleinsäuren
US6773885B1 (en) * 2000-09-29 2004-08-10 Integrated Dna Technologies, Inc. Compositions and methods for visual ribonuclease detection assays
WO2002063049A2 (en) * 2001-02-02 2002-08-15 Genome Therapeutics Corporation Methods for determining a nucleotide at a specific location within a nucleic acid molecule
AU2002351193A1 (en) * 2001-11-28 2003-06-10 Mj Bioworks Incorporated Parallel polymorphism scoring by amplification and error correction

Also Published As

Publication number Publication date
WO2002064833A1 (en) 2002-08-22
JP2005245465A (ja) 2005-09-15
CN100351393C (zh) 2007-11-28
US20040137451A1 (en) 2004-07-15
CA2438574C (en) 2009-08-11
EA005141B1 (ru) 2004-12-30
EA200300880A1 (ru) 2004-02-26
JPWO2002064833A1 (ja) 2004-06-17
JP2004298200A (ja) 2004-10-28
KR20030074797A (ko) 2003-09-19
KR100809949B1 (ko) 2008-03-06
EP1367136A4 (en) 2005-01-12
AU2002232177B2 (en) 2006-11-09
CA2438574A1 (en) 2002-08-22
CN1524127A (zh) 2004-08-25
EP1367136A1 (en) 2003-12-03
US7135291B2 (en) 2006-11-14

Similar Documents

Publication Publication Date Title
JP3681729B2 (ja) 塩基置換の検出方法
TWI257426B (en) Nucleic acid amplification methods
AU704625B2 (en) Method for characterizing nucleic acid molecules
ES2375764T3 (es) Endonucleasas fen-1, mezclas y procedimientos de escisión.
JP6216416B2 (ja) 耐熱性のミスマッチエンドヌクレアーゼの利用方法
KR20110138387A (ko) Fmr1 및 fmr2 유전자의 5´ 비번역 영역을 규명하기 위한 pcr 방법
JPH08505535A (ja) 一本鎖dna分子の生成方法
EP0823479A2 (en) Modified thermostable DNA polymerase
CN101778952A (zh) 使用寡核苷酸和显著缺乏5′-3′核酸外切酶活性的聚合酶抑制扩增
WO2005063977A1 (ja) 核酸の増幅法およびこれを利用した変異核酸の検出法
CN109251907A (zh) 基因突变特异性扩增效率提高的dna聚合酶
CN109251965A (zh) 一种具有增加的基因突变特异性的dna聚合酶活性增强用pcr缓冲液组合物
JP2014079237A (ja) 改変された耐熱性dnaポリメラーゼ
MX2015000766A (es) Sondas, cebadores cooperativos y aplicaciones de ellos.
Zhang et al. Single-base discrimination mediated by proofreading 3′ phosphorothioate-modified primers
US20060199178A1 (en) Method of typing gene polymorphisms
JP6074036B2 (ja) 拡大された基質範囲を有する新規のdnaポリメラーゼ
JPWO2008066163A1 (ja) Cyp2c9遺伝子増幅用プライマーセット、それを含むcyp2c9遺伝子増幅用試薬およびその用途
JPWO2008066161A1 (ja) Nat2遺伝子増幅用プライマーセット、それを含むnat2遺伝子増幅用試薬およびその用途
JP4019171B2 (ja) 誤対合修復系を利用したdnaの解析方法および操作方法
ES2383990T3 (es) Endonucleasas FEN

Legal Events

Date Code Title Description
A975 Report on accelerated examination

Free format text: JAPANESE INTERMEDIATE CODE: A971005

Effective date: 20040426

A131 Notification of reasons for refusal

Free format text: JAPANESE INTERMEDIATE CODE: A131

Effective date: 20040601

A521 Request for written amendment filed

Free format text: JAPANESE INTERMEDIATE CODE: A523

Effective date: 20040729

A131 Notification of reasons for refusal

Free format text: JAPANESE INTERMEDIATE CODE: A131

Effective date: 20050322

A521 Request for written amendment filed

Free format text: JAPANESE INTERMEDIATE CODE: A523

Effective date: 20050406

TRDD Decision of grant or rejection written
A01 Written decision to grant a patent or to grant a registration (utility model)

Free format text: JAPANESE INTERMEDIATE CODE: A01

Effective date: 20050510

A61 First payment of annual fees (during grant procedure)

Free format text: JAPANESE INTERMEDIATE CODE: A61

Effective date: 20050518

R150 Certificate of patent or registration of utility model

Free format text: JAPANESE INTERMEDIATE CODE: R150

FPAY Renewal fee payment (event date is renewal date of database)

Free format text: PAYMENT UNTIL: 20090527

Year of fee payment: 4

FPAY Renewal fee payment (event date is renewal date of database)

Free format text: PAYMENT UNTIL: 20090527

Year of fee payment: 4

FPAY Renewal fee payment (event date is renewal date of database)

Free format text: PAYMENT UNTIL: 20110527

Year of fee payment: 6

LAPS Cancellation because of no payment of annual fees