JP2008526249A5 - - Google Patents
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- JP2008526249A5 JP2008526249A5 JP2007550872A JP2007550872A JP2008526249A5 JP 2008526249 A5 JP2008526249 A5 JP 2008526249A5 JP 2007550872 A JP2007550872 A JP 2007550872A JP 2007550872 A JP2007550872 A JP 2007550872A JP 2008526249 A5 JP2008526249 A5 JP 2008526249A5
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- 239000000523 sample Substances 0.000 claims 96
- 238000000034 method Methods 0.000 claims 54
- 238000012886 linear function Methods 0.000 claims 32
- 230000007614 genetic variation Effects 0.000 claims 30
- 230000035772 mutation Effects 0.000 claims 21
- 208000022559 Inflammatory bowel disease Diseases 0.000 claims 15
- 238000004364 calculation method Methods 0.000 claims 13
- 108020004707 nucleic acids Proteins 0.000 claims 10
- 150000007523 nucleic acids Chemical class 0.000 claims 10
- 102000039446 nucleic acids Human genes 0.000 claims 10
- 239000007787 solid Substances 0.000 claims 10
- 238000004422 calculation algorithm Methods 0.000 claims 9
- 238000003205 genotyping method Methods 0.000 claims 9
- 238000009396 hybridization Methods 0.000 claims 8
- 238000003752 polymerase chain reaction Methods 0.000 claims 8
- 230000003321 amplification Effects 0.000 claims 7
- 238000003199 nucleic acid amplification method Methods 0.000 claims 7
- 108091034117 Oligonucleotide Proteins 0.000 claims 6
- 239000000427 antigen Substances 0.000 claims 5
- 108091007433 antigens Proteins 0.000 claims 5
- 102000036639 antigens Human genes 0.000 claims 5
- 238000004590 computer program Methods 0.000 claims 5
- 210000003743 erythrocyte Anatomy 0.000 claims 5
- 238000000018 DNA microarray Methods 0.000 claims 4
- 108020005187 Oligonucleotide Probes Proteins 0.000 claims 4
- 238000004458 analytical method Methods 0.000 claims 4
- 238000006243 chemical reaction Methods 0.000 claims 4
- 239000002751 oligonucleotide probe Substances 0.000 claims 4
- 238000012408 PCR amplification Methods 0.000 claims 3
- 238000005457 optimization Methods 0.000 claims 3
- JLCPHMBAVCMARE-UHFFFAOYSA-N [3-[[3-[[3-[[3-[[3-[[3-[[3-[[3-[[3-[[3-[[3-[[5-(2-amino-6-oxo-1H-purin-9-yl)-3-[[3-[[3-[[3-[[3-[[3-[[5-(2-amino-6-oxo-1H-purin-9-yl)-3-[[5-(2-amino-6-oxo-1H-purin-9-yl)-3-hydroxyoxolan-2-yl]methoxy-hydroxyphosphoryl]oxyoxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(5-methyl-2,4-dioxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxyoxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(5-methyl-2,4-dioxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(4-amino-2-oxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(5-methyl-2,4-dioxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(5-methyl-2,4-dioxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(4-amino-2-oxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(4-amino-2-oxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(4-amino-2-oxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(4-amino-2-oxopyrimidin-1-yl)oxolan-2-yl]methyl [5-(6-aminopurin-9-yl)-2-(hydroxymethyl)oxolan-3-yl] hydrogen phosphate Polymers Cc1cn(C2CC(OP(O)(=O)OCC3OC(CC3OP(O)(=O)OCC3OC(CC3O)n3cnc4c3nc(N)[nH]c4=O)n3cnc4c3nc(N)[nH]c4=O)C(COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3CO)n3cnc4c(N)ncnc34)n3ccc(N)nc3=O)n3cnc4c(N)ncnc34)n3ccc(N)nc3=O)n3ccc(N)nc3=O)n3ccc(N)nc3=O)n3cnc4c(N)ncnc34)n3cnc4c(N)ncnc34)n3cc(C)c(=O)[nH]c3=O)n3cc(C)c(=O)[nH]c3=O)n3ccc(N)nc3=O)n3cc(C)c(=O)[nH]c3=O)n3cnc4c3nc(N)[nH]c4=O)n3cnc4c(N)ncnc34)n3cnc4c(N)ncnc34)n3cnc4c(N)ncnc34)n3cnc4c(N)ncnc34)O2)c(=O)[nH]c1=O JLCPHMBAVCMARE-UHFFFAOYSA-N 0.000 claims 2
- 239000013642 negative control Substances 0.000 claims 2
- 239000002773 nucleotide Substances 0.000 claims 2
- 125000003729 nucleotide group Chemical group 0.000 claims 2
- 238000009827 uniform distribution Methods 0.000 claims 2
- 238000009007 Diagnostic Kit Methods 0.000 claims 1
- 206010061818 Disease progression Diseases 0.000 claims 1
- 238000003556 assay Methods 0.000 claims 1
- 239000012472 biological sample Substances 0.000 claims 1
- 210000004369 blood Anatomy 0.000 claims 1
- 239000008280 blood Substances 0.000 claims 1
- 239000002299 complementary DNA Substances 0.000 claims 1
- 238000000205 computational method Methods 0.000 claims 1
- 238000001514 detection method Methods 0.000 claims 1
- 230000005750 disease progression Effects 0.000 claims 1
- 239000003814 drug Substances 0.000 claims 1
- 239000007850 fluorescent dye Substances 0.000 claims 1
- 238000013467 fragmentation Methods 0.000 claims 1
- 238000006062 fragmentation reaction Methods 0.000 claims 1
- 230000002068 genetic effect Effects 0.000 claims 1
- 239000011521 glass Substances 0.000 claims 1
- 238000000338 in vitro Methods 0.000 claims 1
- 238000002372 labelling Methods 0.000 claims 1
- 108090000623 proteins and genes Proteins 0.000 claims 1
- 238000011477 surgical intervention Methods 0.000 claims 1
- 230000001225 therapeutic effect Effects 0.000 claims 1
- 238000002560 therapeutic procedure Methods 0.000 claims 1
Applications Claiming Priority (4)
| Application Number | Priority Date | Filing Date | Title |
|---|---|---|---|
| ES200500089 | 2005-01-13 | ||
| ES200502423A ES2326708B1 (es) | 2005-10-05 | 2005-10-05 | Metodos y productos para genotipado in vitro. |
| US75819206P | 2006-01-12 | 2006-01-12 | |
| PCT/IB2006/000796 WO2006075254A2 (en) | 2005-01-13 | 2006-01-12 | Methods and products for in vitro genotyping |
Publications (2)
| Publication Number | Publication Date |
|---|---|
| JP2008526249A JP2008526249A (ja) | 2008-07-24 |
| JP2008526249A5 true JP2008526249A5 (enExample) | 2009-02-26 |
Family
ID=36677993
Family Applications (1)
| Application Number | Title | Priority Date | Filing Date |
|---|---|---|---|
| JP2007550872A Pending JP2008526249A (ja) | 2005-01-13 | 2006-01-12 | invitro遺伝子タイピングのための方法および製品 |
Country Status (7)
| Country | Link |
|---|---|
| US (1) | US7914990B2 (enExample) |
| EP (1) | EP1836322B8 (enExample) |
| JP (1) | JP2008526249A (enExample) |
| AU (1) | AU2006205571B2 (enExample) |
| CA (1) | CA2594730A1 (enExample) |
| MX (1) | MX2007008506A (enExample) |
| WO (1) | WO2006075254A2 (enExample) |
Families Citing this family (44)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| US8401801B2 (en) | 2003-02-20 | 2013-03-19 | Mayo Foundation For Medical Education And Research | Methods for selecting medications |
| US8688385B2 (en) * | 2003-02-20 | 2014-04-01 | Mayo Foundation For Medical Education And Research | Methods for selecting initial doses of psychotropic medications based on a CYP2D6 genotype |
| US8153363B2 (en) | 2005-01-13 | 2012-04-10 | Progenika Biopharma S.A. | Methods and products for in vitro genotyping |
| EP3223182A1 (en) | 2005-11-29 | 2017-09-27 | Children's Hospital Medical Center | Optimization and individualization of medication selection and dosing |
| GB0613844D0 (en) | 2006-07-12 | 2006-08-23 | Progenika Biopharma Sa | Methods and products for in vitro genotyping |
| JPWO2008066161A1 (ja) * | 2006-11-30 | 2010-03-11 | アークレイ株式会社 | Nat2遺伝子増幅用プライマーセット、それを含むnat2遺伝子増幅用試薬およびその用途 |
| KR101051385B1 (ko) | 2006-11-30 | 2011-07-22 | 아크레이 가부시키가이샤 | 비만 유전자 증폭용 프라이머 세트, 그것을 포함하는 비만 유전자 증폭용 시약 및 그 용도 |
| CN101443448A (zh) * | 2006-11-30 | 2009-05-27 | 爱科来株式会社 | Cyp2c9基因扩增用引物对、含有其的cyp2c9基因扩增用试剂及其用途 |
| ITMI20070504A1 (it) | 2007-03-13 | 2008-09-14 | Fond Irccs Ospedale Maggiore | Metodo per la tipizzazione genomica di sistemi eritrocitari, sonde oligonucleotidiche e kit diagnostici relativi |
| JP4410269B2 (ja) * | 2007-03-28 | 2010-02-03 | 株式会社東芝 | N−アセチルトランスフェラーゼ2(nat2)の遺伝子型を検出するための核酸プライマーセット、キット、及び該プライマーセットを用いた検出方法 |
| EP2173896A2 (en) * | 2007-06-29 | 2010-04-14 | Biomonitor A/S | Prognostic method for the determination of the suitability of biopharmaceutical treatment |
| EP2130917A4 (en) * | 2007-10-09 | 2010-09-01 | Arkray Inc | PROBE FOR DETECTING POLYMORPHISM IN A GENE INVOLVED IN IMMUNITY AND USE THEREOF |
| BRPI0911104A2 (pt) | 2008-04-18 | 2015-10-06 | Univ Tennessee Res Foundation | polimorfismos de nucleotídeo único (snp) e associação com resistência a indução de tolerância imune |
| JPWO2009130797A1 (ja) * | 2008-04-22 | 2011-08-11 | 東洋鋼鈑株式会社 | Abo式血液型を判定するためのプローブセット |
| US20110229471A1 (en) | 2008-11-26 | 2011-09-22 | Cedars-Sinai Medical Center | Methods of determining responsiveness to anti-tnf alpha therapy in inflammatory bowel disease |
| US9580752B2 (en) * | 2008-12-24 | 2017-02-28 | Cedars-Sinai Medical Center | Methods of predicting medically refractive ulcerative colitis (MR-UC) requiring colectomy |
| EP2406396A2 (en) | 2009-03-12 | 2012-01-18 | Brainco Biopharma, S.L. | A genotyping tool for improving the prognostic and clinical management of ms patients |
| WO2011027218A1 (en) * | 2009-09-04 | 2011-03-10 | Progenika Biopharma, S.A. | High throughput detection of genomic copy number variations |
| US9677125B2 (en) * | 2009-10-21 | 2017-06-13 | General Electric Company | Detection of plurality of targets in biological samples |
| US9558320B2 (en) * | 2009-10-26 | 2017-01-31 | Genomas, Inc. | Physiogenomic method for predicting drug metabolism reserve for antidepressants and stimulants |
| US20130085081A1 (en) * | 2010-06-08 | 2013-04-04 | National Cancer Center | Risk prediction of developing drug-induced lung injury and detection method and kit of gene for risk prediction |
| EP2397561B1 (en) * | 2010-06-18 | 2017-08-02 | Progenika Biopharma, S.A. | Methods for determining the presence or absence of genetic segments |
| US8766034B2 (en) | 2010-09-22 | 2014-07-01 | Cedars-Sinai Medical Center | TL1A model of inflammation fibrosis and autoimmunity |
| EP2471949B1 (en) * | 2010-12-31 | 2013-12-25 | Progenika Biopharma, S.A. | Method for the identification by molecular techniques of genetic variants that encode no D antigen (D-) and altered C antigen (C+W) |
| JP2012196209A (ja) | 2011-03-09 | 2012-10-18 | Arkray Inc | Cyp3a遺伝子の多型検出用プローブ、多型検出方法、薬効評価方法及び多型検出用試薬キット |
| US10557170B2 (en) | 2011-06-16 | 2020-02-11 | Gendiag.Exe, S.L. | Thromboembolic disease markers |
| PT2535424E (pt) * | 2011-06-16 | 2015-10-29 | Gendiag Exe Sl | Snps associados a doença tromboembólica |
| WO2012171990A1 (en) * | 2011-06-17 | 2012-12-20 | Progenika Biopharma, S.A. | Discrimination of blood type variants |
| WO2013073929A1 (en) * | 2011-11-15 | 2013-05-23 | Acgt Intellectual Limited | Method and apparatus for detecting nucleic acid variation(s) |
| EP2596806A1 (en) * | 2011-11-25 | 2013-05-29 | Index Pharmaceuticals AB | Method for prevention of colectomy |
| WO2013107005A1 (zh) * | 2012-01-18 | 2013-07-25 | 上海市血液中心 | 人稀有血型的多重pcr检测方法和试剂盒 |
| JP6028300B2 (ja) * | 2012-08-31 | 2016-11-16 | 東洋鋼鈑株式会社 | Abo式血液型を判定するためのプライマーセット及びプローブ |
| US20140274763A1 (en) * | 2013-03-15 | 2014-09-18 | Pathway Genomics Corporation | Method and system to predict response to pain treatments |
| KR20240122922A (ko) | 2013-03-27 | 2024-08-13 | 세다르스-신나이 메디칼 센터 | Tl1a 기능 및 관련된 신호전달 경로의 저해에 의한 섬유증 및 염증의 완화 및 반전 |
| EP4105236A1 (en) | 2013-07-19 | 2022-12-21 | Cedars-Sinai Medical Center | Anti-tl1a (tnfsf15) antibody for treatment of inflammatory bowel disease |
| JP2015128399A (ja) * | 2014-01-09 | 2015-07-16 | 東洋紡株式会社 | Cyp3a5の検出方法 |
| CN109462996A (zh) | 2016-03-17 | 2019-03-12 | 西达-赛奈医疗中心 | 通过rnaset2诊断炎性肠病的方法 |
| US11699069B2 (en) * | 2017-07-13 | 2023-07-11 | Helix, Inc. | Predictive assignments that relate to genetic information and leverage machine learning models |
| EP3679060A1 (en) * | 2017-09-07 | 2020-07-15 | Regeneron Pharmaceuticals, Inc. | Solute carrier family 14 member 1 (slc14a1) variants and uses thereof |
| CA3079473A1 (en) | 2017-10-20 | 2019-04-25 | The Governors Of The University Of Alberta | Single nucleotide polymorphisms and feeding efficiency in cattle |
| JP6995604B2 (ja) * | 2017-12-15 | 2022-01-14 | 東洋鋼鈑株式会社 | 一塩基多型検出用プローブの設計方法及びプローブセット |
| EP3844757A1 (en) * | 2018-08-30 | 2021-07-07 | Life Technologies Corporation | Machine learning system for genotyping pcr assays |
| WO2021162028A1 (ja) * | 2020-02-14 | 2021-08-19 | 東レ株式会社 | バイオチップの製造方法 |
| CN112442532B (zh) * | 2020-08-27 | 2023-09-26 | 深圳市卫生健康发展研究中心 | 同时检测20种葡萄糖-6-磷酸脱氢酶缺乏症的引物组及试剂盒 |
Family Cites Families (4)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| CA2366459A1 (en) * | 1999-03-26 | 2000-10-05 | Affymetrix, Inc. | Universal arrays |
| AU2916101A (en) | 1999-10-18 | 2001-04-30 | Curagen Corporation | Method for identifying interacting gene products |
| IL143936A0 (en) * | 1999-10-21 | 2002-04-21 | Univ Case Western Reserve | Gene expression profiling of inflammatory bowel disease |
| CA2490766A1 (en) * | 2002-06-28 | 2004-01-08 | Applera Corporation | A system and method for snp genotype clustering |
-
2006
- 2006-01-12 WO PCT/IB2006/000796 patent/WO2006075254A2/en not_active Ceased
- 2006-01-12 AU AU2006205571A patent/AU2006205571B2/en not_active Ceased
- 2006-01-12 EP EP06727428.2A patent/EP1836322B8/en not_active Expired - Lifetime
- 2006-01-12 US US11/813,646 patent/US7914990B2/en active Active
- 2006-01-12 CA CA002594730A patent/CA2594730A1/en not_active Abandoned
- 2006-01-12 JP JP2007550872A patent/JP2008526249A/ja active Pending
- 2006-01-12 MX MX2007008506A patent/MX2007008506A/es active IP Right Grant
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