JP2017536813A5 - - Google Patents

Download PDF

Info

Publication number
JP2017536813A5
JP2017536813A5 JP2017521095A JP2017521095A JP2017536813A5 JP 2017536813 A5 JP2017536813 A5 JP 2017536813A5 JP 2017521095 A JP2017521095 A JP 2017521095A JP 2017521095 A JP2017521095 A JP 2017521095A JP 2017536813 A5 JP2017536813 A5 JP 2017536813A5
Authority
JP
Japan
Prior art keywords
primer
virus
reverse
cdna
forward primer
Prior art date
Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
Pending
Application number
JP2017521095A
Other languages
English (en)
Japanese (ja)
Other versions
JP2017536813A (ja
Filing date
Publication date
Application filed filed Critical
Priority claimed from PCT/US2015/056491 external-priority patent/WO2016064894A2/en
Publication of JP2017536813A publication Critical patent/JP2017536813A/ja
Publication of JP2017536813A5 publication Critical patent/JP2017536813A5/ja
Pending legal-status Critical Current

Links

JP2017521095A 2014-10-20 2015-10-20 Rnaウイルスを検出するための組成物及び方法 Pending JP2017536813A (ja)

Applications Claiming Priority (5)

Application Number Priority Date Filing Date Title
US201462066277P 2014-10-20 2014-10-20
US62/066,277 2014-10-20
US201562104008P 2015-01-15 2015-01-15
US62/104,008 2015-01-15
PCT/US2015/056491 WO2016064894A2 (en) 2014-10-20 2015-10-20 Compositions and methods for detecting an rna virus

Related Child Applications (1)

Application Number Title Priority Date Filing Date
JP2020189107A Division JP7114676B2 (ja) 2014-10-20 2020-11-13 Rnaウイルスを検出するための組成物及び方法

Publications (2)

Publication Number Publication Date
JP2017536813A JP2017536813A (ja) 2017-12-14
JP2017536813A5 true JP2017536813A5 (enExample) 2018-12-06

Family

ID=55761744

Family Applications (2)

Application Number Title Priority Date Filing Date
JP2017521095A Pending JP2017536813A (ja) 2014-10-20 2015-10-20 Rnaウイルスを検出するための組成物及び方法
JP2020189107A Active JP7114676B2 (ja) 2014-10-20 2020-11-13 Rnaウイルスを検出するための組成物及び方法

Family Applications After (1)

Application Number Title Priority Date Filing Date
JP2020189107A Active JP7114676B2 (ja) 2014-10-20 2020-11-13 Rnaウイルスを検出するための組成物及び方法

Country Status (9)

Country Link
US (2) US10793922B2 (enExample)
EP (2) EP4141128A1 (enExample)
JP (2) JP2017536813A (enExample)
CN (1) CN107208137A (enExample)
AU (2) AU2015336086C1 (enExample)
BR (1) BR112017008082A2 (enExample)
CA (1) CA2965137A1 (enExample)
MX (1) MX2017005159A (enExample)
WO (1) WO2016064894A2 (enExample)

Families Citing this family (47)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
WO2012021493A2 (en) 2010-08-13 2012-02-16 Envirologix Inc. Compositions and methods for quantifying a nucleic acid sequence in a sample
EP2734621B1 (en) 2011-07-22 2019-09-04 President and Fellows of Harvard College Evaluation and improvement of nuclease cleavage specificity
KR102048946B1 (ko) 2012-04-09 2019-11-27 엔바이로로직스 인크. 시료 내 핵산 서열을 정량화하기 위한 조성물 및 방법
US20150044192A1 (en) 2013-08-09 2015-02-12 President And Fellows Of Harvard College Methods for identifying a target site of a cas9 nuclease
US9359599B2 (en) 2013-08-22 2016-06-07 President And Fellows Of Harvard College Engineered transcription activator-like effector (TALE) domains and uses thereof
US9526784B2 (en) 2013-09-06 2016-12-27 President And Fellows Of Harvard College Delivery system for functional nucleases
US9388430B2 (en) 2013-09-06 2016-07-12 President And Fellows Of Harvard College Cas9-recombinase fusion proteins and uses thereof
US9340799B2 (en) 2013-09-06 2016-05-17 President And Fellows Of Harvard College MRNA-sensing switchable gRNAs
US11053481B2 (en) 2013-12-12 2021-07-06 President And Fellows Of Harvard College Fusions of Cas9 domains and nucleic acid-editing domains
UA123387C2 (uk) * 2014-04-22 2021-03-31 Інвайролоджикс, Інк. Виділений праймерний олігонуклеотид та спосіб його застосування
WO2016022363A2 (en) 2014-07-30 2016-02-11 President And Fellows Of Harvard College Cas9 proteins including ligand-dependent inteins
CN107208137A (zh) 2014-10-20 2017-09-26 龙公司 检测rna病毒的组合物和方法
IL294014B2 (en) 2015-10-23 2024-07-01 Harvard College Nucleobase editors and uses thereof
WO2018013579A1 (en) * 2016-07-11 2018-01-18 cARIZONA BOARD OF REGENTS ON BEHALF OF ARIZONA STATE UNIVERSITY Sweat as a biofluid for analysis and disease identification
WO2018027078A1 (en) 2016-08-03 2018-02-08 President And Fellows Of Harard College Adenosine nucleobase editors and uses thereof
CN109804066A (zh) 2016-08-09 2019-05-24 哈佛大学的校长及成员们 可编程cas9-重组酶融合蛋白及其用途
WO2018039438A1 (en) 2016-08-24 2018-03-01 President And Fellows Of Harvard College Incorporation of unnatural amino acids into proteins using base editing
CN110214180A (zh) 2016-10-14 2019-09-06 哈佛大学的校长及成员们 核碱基编辑器的aav递送
US10745677B2 (en) 2016-12-23 2020-08-18 President And Fellows Of Harvard College Editing of CCR5 receptor gene to protect against HIV infection
WO2018165631A1 (en) 2017-03-09 2018-09-13 President And Fellows Of Harvard College Cancer vaccine
WO2018165504A1 (en) 2017-03-09 2018-09-13 President And Fellows Of Harvard College Suppression of pain by gene editing
JP2020510439A (ja) 2017-03-10 2020-04-09 プレジデント アンド フェローズ オブ ハーバード カレッジ シトシンからグアニンへの塩基編集因子
EP3596218B1 (en) * 2017-03-15 2023-08-23 The Broad Institute, Inc. Crispr effector system based diagnostics for virus detection
KR20240116572A (ko) 2017-03-23 2024-07-29 프레지던트 앤드 펠로우즈 오브 하바드 칼리지 핵산 프로그램가능한 dna 결합 단백질을 포함하는 핵염기 편집제
US11560566B2 (en) 2017-05-12 2023-01-24 President And Fellows Of Harvard College Aptazyme-embedded guide RNAs for use with CRISPR-Cas9 in genome editing and transcriptional activation
CN111801345A (zh) 2017-07-28 2020-10-20 哈佛大学的校长及成员们 使用噬菌体辅助连续进化(pace)的进化碱基编辑器的方法和组合物
US11319532B2 (en) 2017-08-30 2022-05-03 President And Fellows Of Harvard College High efficiency base editors comprising Gam
CN111757937A (zh) 2017-10-16 2020-10-09 布罗德研究所股份有限公司 腺苷碱基编辑器的用途
US12406749B2 (en) 2017-12-15 2025-09-02 The Broad Institute, Inc. Systems and methods for predicting repair outcomes in genetic engineering
CN108588050B (zh) * 2018-05-14 2021-06-25 北京艾克伦医疗科技有限公司 Dna聚合酶以及核酸检测方法和试剂盒
WO2019226953A1 (en) 2018-05-23 2019-11-28 The Broad Institute, Inc. Base editors and uses thereof
EP3820495A4 (en) 2018-07-09 2022-07-20 The Broad Institute Inc. RNA-PROGRAMMABLE EPIGENETIC RNA MODIFIERS AND THEIR USES
US12281338B2 (en) 2018-10-29 2025-04-22 The Broad Institute, Inc. Nucleobase editors comprising GeoCas9 and uses thereof
CN109593863A (zh) * 2018-11-28 2019-04-09 江南大学 一种链置换型dna聚合酶诱导等温循环扩增反应检测肉类来源的方法
US12351837B2 (en) 2019-01-23 2025-07-08 The Broad Institute, Inc. Supernegatively charged proteins and uses thereof
JP7602238B2 (ja) 2019-03-07 2024-12-18 国立大学法人 長崎大学 Tertプロモーター変異を検出するプローブセット
CA3130488A1 (en) 2019-03-19 2020-09-24 David R. Liu Methods and compositions for editing nucleotide sequences
US12473543B2 (en) 2019-04-17 2025-11-18 The Broad Institute, Inc. Adenine base editors with reduced off-target effects
US12435330B2 (en) 2019-10-10 2025-10-07 The Broad Institute, Inc. Methods and compositions for prime editing RNA
CN111424116B (zh) * 2020-03-19 2023-06-23 首都儿科研究所 用于检测黄热病毒疫苗株的rt-lamp试剂盒及其专用引物和应用
CN111334610B (zh) * 2020-03-20 2023-11-14 广东省妇幼保健院 一种登革病毒通用型rt-raa-lfd扩增引物及检测方法
CN111471797B (zh) * 2020-04-16 2023-05-12 广东省实验动物监测所 用于检测猫冠状病毒的rt-rpa引物对、探针、试剂盒及检测方法
WO2021226558A1 (en) 2020-05-08 2021-11-11 The Broad Institute, Inc. Methods and compositions for simultaneous editing of both strands of a target double-stranded nucleotide sequence
WO2022011215A1 (en) * 2020-07-10 2022-01-13 The Rockefeller University Method and system for saliva testing for virus including covid-19
JP2022060807A (ja) * 2020-10-05 2022-04-15 キヤノンメディカルシステムズ株式会社 乾燥試薬、試薬キット、乾燥試薬の製造方法、分析方法及び核酸増幅方法
EP4669769A1 (en) * 2023-02-14 2025-12-31 Ador Diagnostics Ltd Rolling circle amplification based on an amplicon
CN116574844B (zh) * 2023-03-01 2024-02-27 宁夏大学 一组检测牛病毒性腹泻病毒的rpa引物对、试剂盒和检测方法

Family Cites Families (69)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US5455166A (en) 1991-01-31 1995-10-03 Becton, Dickinson And Company Strand displacement amplification
US6090555A (en) 1997-12-11 2000-07-18 Affymetrix, Inc. Scanned image alignment systems and methods
US5571639A (en) 1994-05-24 1996-11-05 Affymax Technologies N.V. Computer-aided engineering system for design of sequence arrays and lithographic masks
US6593086B2 (en) * 1996-05-20 2003-07-15 Mount Sinai School Of Medicine Of New York University Nucleic acid amplification methods
US5795716A (en) 1994-10-21 1998-08-18 Chee; Mark S. Computer-aided visualization and analysis system for sequence evaluation
US5629179A (en) 1995-03-17 1997-05-13 Novagen, Inc. Method and kit for making CDNA library
US5733729A (en) 1995-09-14 1998-03-31 Affymetrix, Inc. Computer-aided probability base calling for arrays of nucleic acid probes on chips
JP2000505312A (ja) 1996-03-18 2000-05-09 モレキュラー バイオロジー リソーシーズ,インコーポレイテッド 標的核酸配列増幅
US6130038A (en) 1996-07-16 2000-10-10 Gen-Probe Incorporated Method for amplifying target nucleic acids using modified primers
US6117634A (en) * 1997-03-05 2000-09-12 The Reagents Of The University Of Michigan Nucleic acid sequencing and mapping
US6586806B1 (en) 1997-06-20 2003-07-01 Cypress Semiconductor Corporation Method and structure for a single-sided non-self-aligned transistor
US6229911B1 (en) 1997-07-25 2001-05-08 Affymetrix, Inc. Method and apparatus for providing a bioinformatics database
GB9716231D0 (en) 1997-07-31 1997-10-08 Amersham Int Ltd Base analogues
ATE280246T1 (de) 1997-08-15 2004-11-15 Affymetrix Inc Polymorphismuserkennung mit hilfe cluster-analyse
US6355421B1 (en) 1997-10-27 2002-03-12 Boston Probes, Inc. Methods, kits and compositions pertaining to PNA molecular beacons
US5952202A (en) 1998-03-26 1999-09-14 The Perkin Elmer Corporation Methods using exogenous, internal controls and analogue blocks during nucleic acid amplification
JP3565025B2 (ja) 1998-07-07 2004-09-15 日産自動車株式会社 治具交換装置および治具交換方法
US6185561B1 (en) 1998-09-17 2001-02-06 Affymetrix, Inc. Method and apparatus for providing and expression data mining database
WO2000070095A2 (en) * 1999-05-17 2000-11-23 Dade Behring Inc. Homogeneous isothermal amplification and detection of nucleic acids using a template switch oligonucleotide
US6436677B1 (en) 2000-03-02 2002-08-20 Promega Corporation Method of reverse transcription
ATE312942T1 (de) 2000-10-25 2005-12-15 Hoffmann La Roche Amplifizierung unter verwendung von modifizierten primern
JP2004532615A (ja) 2000-12-27 2004-10-28 インヴィトロジェン コーポレーション 核酸の検出および識別のためのプライマーおよび方法
US20020183936A1 (en) 2001-01-24 2002-12-05 Affymetrix, Inc. Method, system, and computer software for providing a genomic web portal
WO2004022701A2 (en) 2001-07-15 2004-03-18 Keck Graduate Institute Exponential amplification of nucleic acids using nicking agents
US7112423B2 (en) 2001-07-15 2006-09-26 Keck Graduate Institute Nucleic acid amplification using nicking agents
US6585606B2 (en) 2001-07-16 2003-07-01 Thomas S. Penrose Golf club accessory
WO2003016569A1 (en) 2001-08-20 2003-02-27 Takara Bio Inc. Nucleic acid amplification methods
US6977148B2 (en) 2001-10-15 2005-12-20 Qiagen Gmbh Multiple displacement amplification
US6617137B2 (en) 2001-10-15 2003-09-09 Molecular Staging Inc. Method of amplifying whole genomes without subjecting the genome to denaturing conditions
US20030211483A1 (en) * 2002-05-09 2003-11-13 Schroeder Benjamin G. Methods for the enrichment of low-abundance polynucleotides
US7662594B2 (en) * 2002-09-20 2010-02-16 New England Biolabs, Inc. Helicase-dependent amplification of RNA
AU2003272438B2 (en) 2002-09-20 2009-04-02 New England Biolabs, Inc. Helicase dependent amplification of nucleic acids
JP4380305B2 (ja) 2003-11-21 2009-12-09 味の素株式会社 発酵法によるl−アミノ酸の製造法
WO2005087952A1 (en) 2004-03-05 2005-09-22 The Regents Of The University Of California Methods and compositions relating to the pharmacogenetics of abcc2, ugt1a1, and/or slc01b1 gene variants
US20060115838A1 (en) 2004-10-19 2006-06-01 Trevigen Inc. Real-time detection of amplicons using nucleic acid repair enzymes
WO2006074162A2 (en) 2005-01-04 2006-07-13 Hitachi Chemical Company, Ltd. Primer generation rolling circle amplification
CA2616241C (en) 2005-07-25 2012-02-07 Asm Scientific, Inc. Methods for multiplexing recombinase polymerase amplification
EP1924704B1 (en) 2005-08-02 2011-05-25 Rubicon Genomics, Inc. Compositions and methods for processing and amplification of dna, including using multiple enzymes in a single reaction
US8343738B2 (en) * 2005-09-14 2013-01-01 Human Genetic Signatures Pty. Ltd. Assay for screening for potential cervical cancer
US7947286B2 (en) * 2005-10-07 2011-05-24 Panthera Biopharma Llc Drosophila cell lines producing recombinant secretable filovirus surface glycoproteins lacking the membrane spanning domain
EP1951888B1 (en) * 2005-11-09 2012-09-05 PrimeraDx, Inc. Multiplexed quantitative detection of pathogens
US8673567B2 (en) * 2006-03-08 2014-03-18 Atila Biosystems, Inc. Method and kit for nucleic acid sequence detection
CN100489112C (zh) * 2006-03-10 2009-05-20 杭州优思达生物技术有限公司 切口酶扩增靶核酸序列的方法及用于扩增靶核酸序列的试剂盒及其应用
US20090092967A1 (en) 2006-06-26 2009-04-09 Epoch Biosciences, Inc. Method for generating target nucleic acid sequences
WO2008042067A2 (en) 2006-09-28 2008-04-10 Illumina, Inc. Compositions and methods for nucleotide sequencing
JP2010505396A (ja) * 2006-10-06 2010-02-25 ディーエヌエー ジェノテック インク リボ核酸を抽出するための安定化組成物および方法
JP2008136451A (ja) * 2006-12-05 2008-06-19 Hitachi Ltd 核酸増幅法
US20080254458A1 (en) 2007-04-10 2008-10-16 Asiagen Corporation Method of pre-treating in pleural effusion for detection of Mycobacterium tuberculosis
US20080274458A1 (en) 2007-05-01 2008-11-06 Latham Gary J Nucleic acid quantitation methods
US9689031B2 (en) 2007-07-14 2017-06-27 Ionian Technologies, Inc. Nicking and extension amplification reaction for the exponential amplification of nucleic acids
US20090048439A1 (en) * 2007-08-06 2009-02-19 Weisburg William G Isolation of nucleic acids molecules using modified solid supports
US20090197254A1 (en) 2007-12-14 2009-08-06 Ming-Chou Lee Variant scorpion primers for nucleic acid amplification and detection
DK2279263T3 (da) 2008-04-30 2013-11-11 Integrated Dna Tech Inc Rnase-h-baserede assays med anvendelse af modificerede rna-monomerer
EP2333109B1 (en) * 2008-09-03 2013-08-07 Takara Bio, Inc. Composition for detection of rna
AU2010206492B2 (en) * 2009-01-21 2012-07-12 Human Genetic Signatures Pty Ltd Improved isothermal strand displacement amplification
EP2408936A4 (en) 2009-03-18 2013-01-30 Sequenom Inc USE OF HEAT-STAINED ENDONUCLEASES FOR THE PREPARATION OF REPORTER MOLECULES
WO2010126913A1 (en) 2009-04-27 2010-11-04 Gen-Probe Incorporated Methods and kits for use in the selective amplification of target sequences
WO2012021493A2 (en) * 2010-08-13 2012-02-16 Envirologix Inc. Compositions and methods for quantifying a nucleic acid sequence in a sample
EP2420579A1 (en) 2010-08-17 2012-02-22 QIAGEN GmbH Helicase dependent isothermal amplification using nicking enzymes
CN103946398B (zh) * 2011-09-15 2019-08-13 健能泰格技术公司 探针:反义探针组合物对高特异性dna或rna的检测
WO2013101783A2 (en) * 2011-12-30 2013-07-04 Bio-Rad Laboratories, Inc. Methods and compositions for performing nucleic acid amplification reactions
KR102048946B1 (ko) 2012-04-09 2019-11-27 엔바이로로직스 인크. 시료 내 핵산 서열을 정량화하기 위한 조성물 및 방법
WO2014004852A2 (en) * 2012-06-29 2014-01-03 General Electric Company Kit for isothermal dna amplification starting from an rna template
JP2014082936A (ja) * 2012-10-19 2014-05-12 Kyoto Univ 変異型逆転写酵素
UA123387C2 (uk) 2014-04-22 2021-03-31 Інвайролоджикс, Інк. Виділений праймерний олігонуклеотид та спосіб його застосування
US10100370B2 (en) 2014-04-30 2018-10-16 Envirologix Inc. Compositions and methods for detecting huanglongbing
CN107208137A (zh) 2014-10-20 2017-09-26 龙公司 检测rna病毒的组合物和方法
EP3212767A4 (en) 2014-10-28 2018-09-26 Envirologix Inc. Sample preparation vessels, microfluidic circuits, and systems and methods for sample preparation, extraction, and analysis
CA2975236A1 (en) 2015-01-30 2016-08-04 Envirologix, Inc. Compositions and methods for rapid detection of salmonella

Similar Documents

Publication Publication Date Title
JP2017536813A5 (enExample)
Kiatpathomchai et al. Shrimp Taura syndrome virus detection by reverse transcription loop-mediated isothermal amplification combined with a lateral flow dipstick
EP2529026B1 (en) Self-folding amplification of target nucleic acid
JP2019196400A5 (enExample)
NO20161140A1 (no) Oligonukleotid med dobbel spesifisitet
JP5680080B2 (ja) アンカーオリゴヌクレオチドおよびアダプターオリゴヌクレオチドを用いる核酸の正規化した定量化方法
JP2014057585A (ja) 可変ゲノムのための100%配列一致検出方法
JP2012515534A (ja) C型肝炎ウイルス核酸を増幅する方法
JP6078695B2 (ja) ヌクレオチド類似体を使用したdna分子のヘリカーゼ依存性増幅
JPWO2018042598A1 (ja) ジカウイルス検出用プライマーセット
JP2016019495A (ja) 核酸増幅法
JP5553323B2 (ja) Hiv検出キット、及びhiv検出方法
JP2009183228A (ja) Lamp法による甲殻類病原性ウイルスの検出方法及び検出試薬キット
JP5200302B2 (ja) ヘリカーゼを使用するrnaターゲットの同定
JP2014083052A5 (enExample)
EP3126530B1 (en) Method for specific detection of classical swine fever virus
CN107287352A (zh) 鸭肠炎病毒和鸭肝炎病毒快速检测的探针引物组及其方法
JP2008306974A (ja) Hcv遺伝子型判定方法、並びに、これに用いるlnaプローブ及びキット
US11987851B2 (en) Reagents and methods for detecting HCV
KR102076341B1 (ko) Lamp를 이용한 중증열성혈소판감소증후군 바이러스 검출용 조성물 및 이의 용도
JP6592697B2 (ja) 血清型2のデングウイルス検出用キット、血清型3のデングウイルス検出用キット及びデングウイルス検出用キット
Jonassen Detection and sequence characterization of the 3′-end of coronavirus genomes harboring the highly conserved RNA motif s2m
JP2014516545A5 (enExample)
JP2012503472A (ja) 診断用ハイブリダイゼーションアッセイにおける核酸標的の配列変異に対する依存性を低下させるための方法
JP6593984B2 (ja) Rna増幅法およびhiv−1感染診断方法