JP2017532042A - 標的化核酸配列決定のための方法及び組成物 - Google Patents
標的化核酸配列決定のための方法及び組成物 Download PDFInfo
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Abstract
Description
本出願は、米国特許仮出願第62/072,164号、2014年10月29日出願の利益を主張し、これは、全ての目的においてその全体が参照として本明細書に明確に組み込まれる。
本開示は、遺伝子材料の特徴決定に有用な方法、組成物及び系を提供する。特に、本明細書に記載されている方法、組成物及び系は、特定の染色体、染色体の領域、全てのエクソン(エクソーム)、エクソームの一部、特定の遺伝子、遺伝子のパネル(例えば、カイノームもしくは他の標的化遺伝子パネル)、イントロン領域、ゲノムのタイル状部分、またはゲノムの任意の他の選択部分が限定されることなく含まれる、ゲノムの標的化領域の遺伝子特徴決定を提供する。
1つの例示的な態様において、本開示に記載されている方法及び系は、個別の試料(例えば、核酸)を分離区分に沈着または区分化することを提供し、それぞれの区分は、それ自体の内容物を他の区分の内容物から離した状態に維持している。本明細書において使用されるとき、区分とは、様々な異なる形態、例えば、ウエル、管、マイクロまたはナノウエル、中空などの容器または器を指す。しかし好ましい態様では、区分は流体流の中で流動可能である。これらの器は、例えば、内側流体中心またはコアを囲む外側隔壁を有するマイクロカプセルまたは微小胞から構成されていてもよく、あるいは、マトリックス内に材料を進入させる及び/または保持することができる多孔質マトリックスであってもよい。しかし好ましい態様では、これらの区分は、非水性連続相、例えば油相内の水性流体の液滴を構成しうる。様々な異なる器は、例えば、米国特許出願第13/966,150号、2013年8月13日出願に記載されている。同様に、非水性または油連続相中に安定した液滴を作り出すエマルション系は、例えば米国特許出願公開第2010−0105112号に詳細に記載されている。特定の場合において、マイクロ流体チャンネル網状組織は、本明細書に記載されている区分の生成に特に適している。そのようなマイクロ流体デバイスには、米国特許出願第14/682,952号、2015年4月9日出願において詳細に記載されたものが含まれ、この全開示は、全ての目的においてその全体が参照として本明細書に組み込まれる。細胞の水性混合物がその中を通って非水性流体中に抽出される多孔質膜を含む、代替的な機構を個別の細胞の区分化に用いることもできる。そのような系は、例えば、Nanomi,Incから一般に入手可能である。
1つの態様において、本明細書に記載されている系及び方法は、ゲノムの標的化領域から配列情報を得るために使用される。
理解されるように、本明細書において考察される方法及び系を使用して、任意の種類のゲノム材料から標的化配列情報を得ることができる。そのようなゲノム材料は、患者から採取した試料によって得てもよい。本明細書において考察される方法及び系に使用されるゲノム材料の例示的な試料及び種類には、ポリヌクレオチド、核酸、オリゴヌクレオチド、循環無細胞核酸、循環腫瘍細胞(CTC)、核酸断片、ヌクレオチド、DNA、RNA、ペプチドポリヌクレオチド、相補的DNA(cDNA)、二本鎖DNA(dsDNA)、一本鎖DNA(ssDNA)、プラスミドDNA、コスミドDNA、染色体DNA、ゲノムDNA(gDNA)、ウイルスDNA、細菌DNA、mtDNA(ミトコンドリアDNA)、リボソームRNA、無細胞DNA、無細胞胎児DNA(cffDNA)、mRNA、rRNA、tRNA、nRNA、siRNA、snRNA、snoRNA、scaRNA、マイクロRNA、dsRNA、ウイルスRNAなどが限定されることなく含まれる。まとめると、使用される試料は、特定の処理に必要性に応じて変わりうる。
NA12878ヒト細胞系のゲノムDNAを、Blue−PippinDNAサイズ分類系の使用によりサイズに基づいた断片の分離に付して、およそ10kb以上の長さの断片を回収した。次に、サイズに基づいて選択された試料核酸を、マイクロ流体区分化系の使用により、フッ素化油連続相内において水性液滴中でバーコードビーズと共に同時区分化し(例えば、2015年4月9日に出願され、全ての目的においてその全体が参照として本明細書に組み込まれる、米国特許出願第14/682,952号を参照すること)、ここで水性液滴は、dNTP、熱安定性DNAポリメラーゼ及び液滴内で増幅を実施する他の試薬、ならびにビーズからバーコードオリゴヌクレオチドを遊離するDTTも含んだ。これを、1ngの総投入DNA及び2ngの総投入DNAの両方で繰り返した。バーコードビーズを、700,000個を超える異なるバーコード配列のバーコード密度を表す貯蔵ライブラリーのサブセットとして得た。バーコード含有オリゴヌクレオチドは、追加の配列構成成分を含み、一般構造:
ビーズ−P5−BC−R1−Nmer
を有した。
NA19701及びNA19661細胞系のゲノムDNAは、上記の実施例1に記載された方法に従って調製した。これらの2つの細胞系の、位相データを含むデータを、下記の表に提示する。
Claims (95)
- ゲノムの1つ以上の選択部分を配列決定する方法であって、
(a)出発ゲノム材料を準備することと、
(b)前記出発ゲノム材料の個別の核酸分子を、分離区分がそれぞれ第1の個別核酸分子を含有するように、分離区分の中に分配することと、
(c)前記分離区分中にある前記個別の核酸分子を断片化して、複数の断片を形成し、断片のそれぞれがバーコードを更に含み、所定の分離区分内の断片が、それぞれ共通のバーコードを含み、それによって、それぞれの断片を、それが誘導された前記個別の核酸分子と関連づけることと、
(d)前記ゲノムの前記1つ以上の選択部分の少なくとも一部を含む断片が豊富化された個体群を提供することと、
(e)前記個体群から配列情報を取得し、それによってゲノムの1つ以上の選択部分を配列決定することと
を含む、前記方法。 - 前記提供工程(d)が、
(i)前記ゲノムの前記1つ以上の選択部分の中の、または近くの領域に相補的なプローブを、前記断片とハイブリッド形成させて、プローブ断片複合体を形成するステップと、
(ii)プローブ断片複合体を固体支持体の表面に捕捉し、
それによって、前記ゲノムの前記1つ以上の選択部分の少なくとも一部を含む断片を、前記個体群において豊富化するステップと
を含む、請求項1に記載の方法。 - 前記固体支持体がビーズを含む、請求項2に記載の方法。
- 前記プローブが結合部分を含み、前記表面が捕捉部分を含み、前記プローブ断片複合体が、前記結合部分と前記捕捉部分との反応によって前記表面に捕捉される、請求項2〜3に記載の方法。
- 前記捕捉部分がストレプトアビジンを含み、前記結合部分がビオチンを含む、請求項4に記載の方法。
- 前記捕捉部分がストレプトアビジン磁気ビーズを含み、前記結合部分がビオチン化RNAライブラリーベイトを含む、請求項4に記載の方法。
- 前記捕捉部分が、全体的もしくは部分的なエクソームの捕捉、パネルの捕捉、標的化エクソンの捕捉、アンカード(anchored)エクソームの捕捉及びタイル状(tiled)ゲノム領域の捕捉からなる群から選択されるメンバーに向けられている、請求項4に記載の方法。
- 前記取得ステップ(e)の前に、前記断片を増幅して、増幅産物を形成する、請求項1〜7に記載の方法。
- 前記増幅産物が、部分的または完全なヘアピン構造を形成する能力がある、請求項8に記載の方法。
- 前記取得ステップ(e)が、短い読み込み長さ(read−length)配列決定反応及び長い読み込み長さ配列決定反応からなる群から選択される配列決定反応を含む、請求項1〜9に記載の方法。
- 前記配列決定反応が、短い読み込みで高い精度の配列決定反応である、請求項10に記載の方法。
- 前記取得ステップ(e)が、前記出発ゲノム材料の90%未満についての配列情報を提供する、請求項1〜11に記載の方法。
- 前記取得ステップ(e)が、前記出発ゲノム材料の75%未満についての配列情報を提供する、請求項1〜11に記載の方法。
- 前記取得ステップ(e)が、前記出発ゲノム材料の50%未満についての配列情報を提供する、請求項1〜11に記載の方法。
- 前記方法が、単離された前記断片の重複配列に基づいて、推定コンティグ中において2つ以上の前記個別の核酸分子を連結することを更に含み、前記推定コンティグが、少なくとも10kbのN50長さを含む、請求項1〜14に記載の方法。
- 前記推定コンティグが、少なくとも20kbのN50長さを含む、請求項15に記載の方法。
- 前記推定コンティグが、少なくとも40kbのN50長さを含む、請求項15に記載の方法。
- 前記推定コンティグが、少なくとも50kbのN50長さを含む、請求項15に記載の方法。
- 前記推定コンティグが、少なくとも100kbのN50長さを含む、請求項15に記載の方法。
- 前記推定コンティグが、少なくとも200kbのN50長さを含む、請求項15に記載の方法。
- 前記方法が、単離された前記断片の配列内の重複位相変異体に基づいて、位相ブロック中において2つ以上の前記個別の核酸分子を連結することを更に含み、前記位相ブロックが、少なくとも10kbのN50長さを含む、請求項1〜14に記載の方法。
- 前記位相ブロックが、少なくとも20kbのN50長さを含む、請求項21に記載の方法。
- 前記位相ブロックが、少なくとも40kbのN50長さを含む、請求項21に記載の方法。
- 前記位相ブロックが、少なくとも50kbのN50長さを含む、請求項18に記載の方法。
- 前記位相ブロックが、少なくとも100kbのN50長さを含む、請求項21に記載の方法。
- 前記位相ブロックが、少なくとも200kbのN50長さを含む、請求項21に記載の方法。
- 前記ゲノムの前記選択部分が、エクソームを含む、請求項1〜26に記載の方法。
- それぞれの分離区分中の前記個別の核酸分子が、単一細胞のゲノムDNAを含む、請求項1〜26に記載の方法。
- それぞれの分離区分が、異なる染色体のゲノムDNAを含む、請求項1〜28に記載の方法。
- 前記分離区分が、エマルションの液滴を含む、請求項1〜29に記載の方法。
- 前記断片に結合した前記バーコードが、少なくとも700,000個のバーコードのライブラリーからのものである、請求項1〜30に記載の方法。
- 前記バーコードが、追加の配列セグメントを更に含む、請求項1〜31に記載の方法。
- 前記追加の配列セグメントが、プライマー、結合配列、ランダムn−merオリゴヌクレオチド、ウラシル核酸塩基を含むオリゴヌクレオチドからなる群から選択される1つ以上のメンバーを含む、請求項32に記載の方法。
- ゲノム試料の1つ以上の標的化部分から配列情報を取得する方法であって、
(a)前記ゲノム試料の個別の第1の核酸断片分子を分離区分の中に提供することと、
(b)前記分離区分内の前記個別の第1核酸断片分子を断片化して、前記個別の第1の核酸断片分子のそれぞれから複数の第2の断片を作り出すことと、
(c)共通のバーコード配列を、前記複数の第2の断片のそれぞれが、それらが含有されている前記分離区分に起因するように、前記分離区分内の前記複数の第2の断片に結合することと、
(d)前記ゲノム試料の前記1つ以上の標的化部分に向けられているプローブのライブラリーを、前記第2の断片に適用することと、
(e)配列決定反応を実施して、前記プローブのライブラリーとハイブリッド形成する前記複数の第2の断片の配列を特定し、それによって前記ゲノム試料の前記1つ以上の標的化部分から配列情報を取得することと
を含む、前記方法。 - 前記プローブのライブラリーを結合部分に結合し、前記実施ステップ(e)の前に、前記第2の断片を、捕捉部分を含んだ表面に、前記結合部分と前記捕捉部分の反応を介して捕捉する、請求項34に記載の方法。
- 前記実施ステップ(e)の前に、前記第2の断片を、前記第2の断片が前記表面に捕捉される前後に増幅する、請求項35に記載の方法。
- 前記結合部分がビオチンを含み、前記捕捉部分がストレプトアビジンを含む、請求項35〜36に記載の方法。
- 前記配列決定反応が、短い読み込み長さ配列決定反応及び長い読み込み長さ配列決定反応からなる群から選択されるメンバーである、請求項34〜37に記載の方法。
- 前記配列決定反応が、短い読み込みで高い精度の配列決定反応である、請求項34〜38に記載の方法。
- 前記方法が、前記複数の第の2断片の重複配列に基づいて、推定コンティグ中において2つ以上の前記個別の核酸分子を連結することを更に含み、前記推定コンティグが、少なくとも10kbのN50長さを含む、請求項34〜39に記載の方法。
- 前記推定コンティグが、少なくとも20kbのN50長さを含む、請求項40に記載の方法。
- 前記推定コンティグが、少なくとも40kbのN50長さを含む、請求項40に記載の方法。
- 前記推定コンティグが、少なくとも50kbのN50長さを含む、請求項40に記載の方法。
- 前記推定コンティグが、少なくとも100kbのN50長さを含む、請求項40に記載の方法。
- 前記推定コンティグが、少なくとも200kbのN50長さを含む、請求項40に記載の方法。
- 前記方法が、前記複数の第2の断片の配列内の重複位相変異体に基づいて、位相ブロック中において2つ以上の複数の前記個別の核酸分子を連結することを更に含み、前記位相ブロックが、少なくとも10kbのN50長さを含む、請求項34〜39に記載の方法。
- 前記位相ブロックが、少なくとも20kbのN50長さを含む、請求項46に記載の方法。
- 前記位相ブロックが、少なくとも40kbのN50長さを含む、請求項46に記載の方法。
- 前記位相ブロックが、少なくとも50kbのN50長さを含む、請求項46に記載の方法。
- 前記位相ブロックが、少なくとも100kbのN50長さを含む、請求項46に記載の方法。
- 前記位相ブロックが、少なくとも200kbのN50長さを含む、請求項46に記載の方法。
- 前記ゲノムの前記標的化部分が、エクソームを含む、請求項34〜51に記載の方法。
- それぞれの分離区分中の前記ゲノム試料が、単一細胞のゲノムDNAを含む、請求項34〜51に記載の方法。
- それぞれの分離区分が、異なる染色体のゲノムDNAを含む、請求項34〜51に記載の方法。
- 前記分離区分が、エマルションの液滴を含む、請求項34〜54に記載の方法。
- 前記第2の断片に結合した前記バーコード配列が、少なくとも700,000個のバーコードのライブラリーからのものである、請求項34〜55に記載の方法。
- 前記バーコードが、追加の配列セグメントを更に含む、請求項34〜56に記載の方法。
- 前記追加の配列セグメントが、プライマー、結合配列、ランダムn−merオリゴヌクレオチド、ウラシル核酸塩基を含むオリゴヌクレオチドからなる群から選択される1つ以上のメンバーを含む、請求項57に記載の方法。
- 前記第2の断片が、得られた増幅産物が部分的または完全なヘアピン構造を形成する能力があるように増幅される、請求項36〜58に記載の方法。
- 分子構成を保持しながら、ゲノム試料の1つ以上の標的化部分から配列情報を取得する方法であって、
(a)出発ゲノム材料を準備することと、
(b)前記出発ゲノム材料の個別の核酸分子を、分離区分がそれぞれ第1の個別核酸分子を含有するように、分離区分の中に分配することと、
(c)前記分離区分中における前記第1の個別核酸分子を断片化して、複数の断片を形成することと、
(d)前記ゲノムの1つ以上の選択部分の少なくとも一部を含む断片が豊富化された個体群を提供することと、
(e)前記個体群から配列情報を取得し、それによって、分子構成を保持しながら、前記ゲノム試料の1つ以上の標的化部分を配列決定することと
を含む、前記方法。 - 前記取得ステップ(e)の前に、前記複数の断片にバーコードをタグ付けして、それぞれの断片を、それらが形成された前記分離区分と関連づける、請求項60に記載の方法。
- ステップ(b)の前記個別の核酸分子が、第1の個別の核酸分子のそれぞれの分子構成が維持されるように分配される、請求項60に記載の方法。
- ゲノム試料の1つ以上の標的化部分から配列情報を取得する方法であって、
(a)前記ゲノム試料の個別の核酸断分子を分離区分の中に提供することと、
(b)前記分離区分中にある前記個別の核酸分子を断片化して、複数の断片を形成し、断片のそれぞれがバーコードを更に含み、所定の分離区分内の断片が、それぞれ共通のバーコードを含み、それによって、それぞれの断片を、それが誘導された前記個別の核酸分子と関連づけることと、
(c)前記ゲノム試料の前記1つ以上の標的化部分に向けられているプローブのライブラリーを、前記複数の断片に適用し、前記プローブのライブラリーにおける少なくとも大部分のプローブが、有益な一塩基多形(SNP)とハイブリッド形成するように設計されていることと、
(d)配列決定反応を実施して、前記プローブのライブラリーとハイブリッド形成する前記複数の断片の配列を特定し、それによって前記ゲノム試料の前記1つ以上の標的化部分から配列情報を取得することと
を含む、前記方法。 - 前記プローブのライブラリーにおける約80%〜99%のプローブが、有益なSNPとハイブリッド形成するように設計されている、請求項63に記載の方法。
- 前記プローブのライブラリーにおける約65%〜85%のプローブが、有益なSNPとハイブリッド形成するように設計されている、請求項63に記載の方法。
- 前記プローブのライブラリーにおける約70%〜80%のプローブが、有益なSNPとハイブリッド形成するように設計されている、請求項63に記載の方法。
- 前記プローブのライブラリーにおける少なくとも65%のプローブが、有益なSNPとハイブリッド形成するように設計されている、請求項63に記載の方法。
- 前記プローブのライブラリーにおける少なくとも75%のプローブが、有益なSNPとハイブリッド形成するように設計されている、請求項63に記載の方法。
- 前記プローブのライブラリーにおける少なくとも85%のプローブが、有益なSNPとハイブリッド形成するように設計されている、請求項63に記載の方法。
- 前記プローブのライブラリーにおける少なくとも90%のプローブが、有益なSNPとハイブリッド形成するように設計されている、請求項63に記載の方法。
- 前記有益なSNPが、前記ゲノム試料の前記標的化部分のエクソンとイントロンの両方に位置する、請求項63〜70に記載の方法。
- 前記プローブのライブラリーにおける前記大部分のプローブが、約1キロベースから約15キロベース(kb)の間隔を置いた有益なSNPとハイブリッド形成するように更に設計されている、請求項63〜70に記載の方法。
- 前記プローブのライブラリーにおける前記大部分のプローブが、約5kb〜約10kbの間隔を置いた有益なSNPとハイブリッド形成するように更に設計されている、請求項63〜70に記載の方法。
- 前記プローブのライブラリーにおける前記大部分のプローブが、約3kb〜約6kbの間隔を置いた有益なSNPとハイブリッド形成するように更に設計されている、請求項63〜70に記載の方法。
- 前記プローブのライブラリーにおける前記大部分のプローブが、約1kbの間隔を置いた有益なSNPとハイブリッド形成するように更に設計されている、請求項63〜70に記載の方法。
- 前記プローブのライブラリーにおける前記大部分のプローブが、約3kbの間隔を置いた有益なSNPとハイブリッド形成するように更に設計されている、請求項63〜70に記載の方法。
- 前記プローブのライブラリーにおける前記大部分のプローブが、約10kbの間隔を置いた有益なSNPとハイブリッド形成するように更に設計されている、請求項63〜70に記載の方法。
- 前記プローブのライブラリー内の複数のプローブが、以下の条件の1つ以上の任意の組み合わせを満たすように設計され、
(i)エクソンとイントロンの境界の10〜50kbの範囲内に有益なSNPがない前記ゲノム試料の標的化部分では、前記複数のプローブが、その境界からのイントロン内の有益なSNPとハイブリッド形成するように設計され、
(ii)エクソン内に第1の有益なSNPが存在し、その第1の有益なSNPが隣接イントロンとの境界から10〜50kbに位置し、前記隣接イントロン内に第2の有益なSNPが存在し、その第2の有益なSNPが前記境界から10〜50kbに位置する前記ゲノム試料の標的化部分では、前記複数のプローブが、前記第1及び第2の有益なSNPの間の前記ゲノム試料の領域とハイブリッド形成するように設計され、
(iii)少なくとも10〜50kbに有益なSNPを含まない前記ゲノム試料の標的化部分では、前記複数のプローブが、前記ゲノム試料のこれらの標的化部分と0.5、1、3、または5kb毎にハイブリッド形成するように設計され、
(iv)エクソンとイントロンの境界の10〜50kbの範囲内に有益なSNPがない前記ゲノム試料の標的化部分では、前記複数のプローブが、前記エクソンとイントロンの境界に二番目に近い有益なSNPとハイブリッド形成するように設計される
請求項63〜77に記載の方法。 - 前記プローブのライブラリーが、バーコードに連結情報を提供する密度でエクソンに隣接する、前記ゲノム試料の領域と、ハイブリッド形成するように設計されたプローブを含む、請求項63〜78に記載の方法。
- 前記プローブのライブラリーにより表される適用範囲が、長い個別の核酸断片分子を高い割合で含有する方法が小さい適用範囲のプローブのライブラリーを使用するように、前記分離区分内の前記ゲノム試料の前記個別の核酸断片分子の長さの分配に反比例する、請求項63〜79に記載の方法。
- 前記プローブのライブラリーが、前記ゲノム試料の前記標的化部分の適用範囲を最適化し、前記ゲノム試料の前記標的化部分が、高品質のマップ範囲を含む、請求項63〜80に記載の方法。
- 前記プローブのライブラリーが、ゲノム試料の前記1つ以上の標的化部分の特徴により情報提供される特徴を有し、
(i)高品質マップの標的化部分では、前記プローブのライブラリーが、エクソンとイントロンの境界の1kb〜1メガメース(Mb)の範囲内の有益なSNPとハイブリッド形成するプローブを含み、
(ii)バーコード付き前記断片の長さの前記分配が、高い割合で約250kbより長い断片を有する標的化部分では、前記プローブのライブラリーが、少なくとも50kb離れている有益なSNPとハイブリッド形成するプローブを含み、
(iii)低品質マップの標的化部分では、前記プローブのライブラリーが、エクソンとイントロンの境界の1kb内の有益なSNPとハイブリッド形成するプローブを含み、かつエクソン内及びイントロン内の有益なSNPとハイブリッド形成するプローブを含み、
(iv)遺伝子間領域を含む標的化部分では、前記プローブのライブラリーが、少なくとも2kbの距離の間隔を置いた有益なSNPとハイブリッド形成するプローブを含む
請求項63〜80に記載の方法。 - ステップ(d)で取得した前記配列情報が、遺伝子融合、コピー数変動、挿入及び欠失からなる群の1つ以上のメンバーについての情報を含む、請求項63〜84に記載の方法。
- ゲノム試料の1つ以上の標的化部分から配列情報を取得する方法であって、
(a)前記ゲノム試料の個別の核酸断分子を準備することと、
(b)前記個別の核酸分子を断片化して、複数の断片を形成し、前記断片のそれぞれがバーコードを更に含み、同じ前記個別の核酸分子の断片が共通のバーコードを含み、それによって、それぞれの断片を、それが誘導された前記個別の核酸分子と関連づけることと、
(c)前記複数の断片を、前記ゲノム試料の前記1つ以上の標的化部分を含有する断片で豊富化することと、
(d)配列決定反応を実施して、豊富化された前記複数の断片の配列を特定し、それによって前記ゲノム試料の前記1つ以上の標的化部分から配列情報を取得することと
を含む、前記方法。 - バーコードが、前記断片化ステップ(b)の前に、前記個別の核酸分子に付加される、請求項86に記載の方法。
- 前記バーコードが、トランスポゾンの使用により、前記個別の核酸分子に付加される、請求項87に記載の方法。
- バーコードが、前記断片化と同時に付加される、請求項86に記載の方法。
- 前記断片化が増幅ステップを含む、請求項89に記載の方法。
- 前記豊富化ステップ(c)が、前記ゲノム試料の前記1つ以上の標的化部分に向けられたプローブのライブラリーを適用することを含む、請求項86〜90に記載の方法。
- 前記プローブのライブラリーを結合部分に結合し、前記実施ステップ(d)の前に、前記断片を、前記結合部分と前記捕捉部分の反応を介して捕捉する、請求項91に記載の方法。
- 前記結合部分と前記捕捉部分との前記反応が、前記断片を表面に固定化する、請求項92に記載の方法。
- 前記結合部分がビオチンを含み、前記捕捉部分がストレプトアビジンを含む、請求項92〜93に記載の方法。
- 前記配列決定反応が、短い読み込み長さ配列決定反応及び長い読み込み長さ配列決定反応からなる群から選択されるメンバーである、請求項86〜94に記載の方法。
- 前記配列決定反応が、短い読み込みで高い精度の配列決定反応である、請求項86〜94に記載の方法。
- 前記断片が、得られた増幅産物が部分的または完全なヘアピン構造を形成する能力があるように増幅される、請求項86〜96に記載の方法。
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