JP2019509751A5 - - Google Patents
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- Publication number
- JP2019509751A5 JP2019509751A5 JP2018551295A JP2018551295A JP2019509751A5 JP 2019509751 A5 JP2019509751 A5 JP 2019509751A5 JP 2018551295 A JP2018551295 A JP 2018551295A JP 2018551295 A JP2018551295 A JP 2018551295A JP 2019509751 A5 JP2019509751 A5 JP 2019509751A5
- Authority
- JP
- Japan
- Prior art keywords
- oligonucleotide
- sequence
- reaction chamber
- dna
- fluid reaction
- Prior art date
- Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
- Granted
Links
- 108091034117 Oligonucleotide Proteins 0.000 claims description 140
- 108091028043 Nucleic acid sequence Proteins 0.000 claims description 130
- 239000012530 fluid Substances 0.000 claims description 108
- 238000000034 method Methods 0.000 claims description 47
- 239000002773 nucleotide Substances 0.000 claims description 43
- 125000003729 nucleotide group Chemical group 0.000 claims description 43
- 230000000295 complement effect Effects 0.000 claims description 33
- JLCPHMBAVCMARE-UHFFFAOYSA-N [3-[[3-[[3-[[3-[[3-[[3-[[3-[[3-[[3-[[3-[[3-[[5-(2-amino-6-oxo-1H-purin-9-yl)-3-[[3-[[3-[[3-[[3-[[3-[[5-(2-amino-6-oxo-1H-purin-9-yl)-3-[[5-(2-amino-6-oxo-1H-purin-9-yl)-3-hydroxyoxolan-2-yl]methoxy-hydroxyphosphoryl]oxyoxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(5-methyl-2,4-dioxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxyoxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(5-methyl-2,4-dioxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(4-amino-2-oxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(5-methyl-2,4-dioxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(5-methyl-2,4-dioxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(4-amino-2-oxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(4-amino-2-oxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(4-amino-2-oxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(4-amino-2-oxopyrimidin-1-yl)oxolan-2-yl]methyl [5-(6-aminopurin-9-yl)-2-(hydroxymethyl)oxolan-3-yl] hydrogen phosphate Polymers Cc1cn(C2CC(OP(O)(=O)OCC3OC(CC3OP(O)(=O)OCC3OC(CC3O)n3cnc4c3nc(N)[nH]c4=O)n3cnc4c3nc(N)[nH]c4=O)C(COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3CO)n3cnc4c(N)ncnc34)n3ccc(N)nc3=O)n3cnc4c(N)ncnc34)n3ccc(N)nc3=O)n3ccc(N)nc3=O)n3ccc(N)nc3=O)n3cnc4c(N)ncnc34)n3cnc4c(N)ncnc34)n3cc(C)c(=O)[nH]c3=O)n3cc(C)c(=O)[nH]c3=O)n3ccc(N)nc3=O)n3cc(C)c(=O)[nH]c3=O)n3cnc4c3nc(N)[nH]c4=O)n3cnc4c(N)ncnc34)n3cnc4c(N)ncnc34)n3cnc4c(N)ncnc34)n3cnc4c(N)ncnc34)O2)c(=O)[nH]c1=O JLCPHMBAVCMARE-UHFFFAOYSA-N 0.000 claims description 21
- 125000005647 linker group Chemical group 0.000 claims description 17
- 150000007523 nucleic acids Chemical class 0.000 claims description 17
- 108020004707 nucleic acids Proteins 0.000 claims description 13
- 102000039446 nucleic acids Human genes 0.000 claims description 13
- 239000000463 material Substances 0.000 claims description 11
- 108020004414 DNA Proteins 0.000 claims description 9
- 238000003752 polymerase chain reaction Methods 0.000 claims description 6
- 238000010186 staining Methods 0.000 claims description 5
- 102000016928 DNA-directed DNA polymerase Human genes 0.000 claims description 4
- 108010014303 DNA-directed DNA polymerase Proteins 0.000 claims description 4
- 230000003321 amplification Effects 0.000 claims description 4
- 238000003199 nucleic acid amplification method Methods 0.000 claims description 4
- 238000009396 hybridization Methods 0.000 claims description 2
- 150000001345 alkine derivatives Chemical class 0.000 description 6
- 125000002355 alkine group Chemical group 0.000 description 6
- 125000000852 azido group Chemical group *N=[N+]=[N-] 0.000 description 6
- 238000012986 modification Methods 0.000 description 1
- 230000004048 modification Effects 0.000 description 1
Priority Applications (2)
| Application Number | Priority Date | Filing Date | Title |
|---|---|---|---|
| JP2021205691A JP2022037151A (ja) | 2016-03-29 | 2021-12-20 | 対流流体装置における核酸の表面ベースの検出方法 |
| JP2023192003A JP2023184748A (ja) | 2016-03-29 | 2023-11-10 | 対流流体装置における核酸の表面ベースの検出方法 |
Applications Claiming Priority (3)
| Application Number | Priority Date | Filing Date | Title |
|---|---|---|---|
| US201662314909P | 2016-03-29 | 2016-03-29 | |
| US62/314,909 | 2016-03-29 | ||
| PCT/US2017/024530 WO2017172760A1 (en) | 2016-03-29 | 2017-03-28 | Surface-based detection of nucleic acid in a convection flow fluidic device |
Related Child Applications (1)
| Application Number | Title | Priority Date | Filing Date |
|---|---|---|---|
| JP2021205691A Division JP2022037151A (ja) | 2016-03-29 | 2021-12-20 | 対流流体装置における核酸の表面ベースの検出方法 |
Publications (3)
| Publication Number | Publication Date |
|---|---|
| JP2019509751A JP2019509751A (ja) | 2019-04-11 |
| JP2019509751A5 true JP2019509751A5 (https=) | 2020-04-23 |
| JP6998319B2 JP6998319B2 (ja) | 2022-01-18 |
Family
ID=59965134
Family Applications (3)
| Application Number | Title | Priority Date | Filing Date |
|---|---|---|---|
| JP2018551295A Active JP6998319B2 (ja) | 2016-03-29 | 2017-03-28 | 対流流体装置における核酸の表面ベースの検出方法 |
| JP2021205691A Withdrawn JP2022037151A (ja) | 2016-03-29 | 2021-12-20 | 対流流体装置における核酸の表面ベースの検出方法 |
| JP2023192003A Pending JP2023184748A (ja) | 2016-03-29 | 2023-11-10 | 対流流体装置における核酸の表面ベースの検出方法 |
Family Applications After (2)
| Application Number | Title | Priority Date | Filing Date |
|---|---|---|---|
| JP2021205691A Withdrawn JP2022037151A (ja) | 2016-03-29 | 2021-12-20 | 対流流体装置における核酸の表面ベースの検出方法 |
| JP2023192003A Pending JP2023184748A (ja) | 2016-03-29 | 2023-11-10 | 対流流体装置における核酸の表面ベースの検出方法 |
Country Status (16)
| Country | Link |
|---|---|
| US (2) | US20200324292A1 (https=) |
| EP (2) | EP3436198B1 (https=) |
| JP (3) | JP6998319B2 (https=) |
| KR (2) | KR102472071B1 (https=) |
| CN (1) | CN109477136A (https=) |
| AU (2) | AU2017241766A1 (https=) |
| BR (1) | BR112018070197A2 (https=) |
| CA (1) | CA3019422A1 (https=) |
| DK (1) | DK3436198T3 (https=) |
| ES (1) | ES2920954T3 (https=) |
| IL (1) | IL261980B2 (https=) |
| PH (1) | PH12018502100A1 (https=) |
| PT (1) | PT3436198T (https=) |
| RU (1) | RU2018137800A (https=) |
| SG (1) | SG11201808493QA (https=) |
| WO (1) | WO2017172760A1 (https=) |
Families Citing this family (5)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| KR102843431B1 (ko) * | 2018-09-14 | 2025-08-08 | 윌리엄 마쉬 라이스 유니버시티 | 대류 가열 및 무-라벨 마이크로어레이를 사용하여 dna의 다중 증폭 및 검출을 위한 장치 및 방법 |
| CN113257351A (zh) * | 2020-02-12 | 2021-08-13 | 赛纳生物科技(北京)有限公司 | 一种用于多碱基基因测序的基因文库及其构建方法 |
| CN111879922A (zh) * | 2020-07-13 | 2020-11-03 | 东南大学 | 适用于核酸及免疫同步检测集成纸基芯片结构及制造方法 |
| DE102020212253A1 (de) * | 2020-09-29 | 2022-03-31 | SpinDiag GmbH | Probenträger und Rotationsvorrichtung |
| EP4640315A1 (en) * | 2024-04-26 | 2025-10-29 | Appolon Bioteck | Devices and methods for rapid nucleic acid amplification |
Family Cites Families (31)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| US6027880A (en) | 1995-08-02 | 2000-02-22 | Affymetrix, Inc. | Arrays of nucleic acid probes and methods of using the same for detecting cystic fibrosis |
| US6031098A (en) * | 1997-08-11 | 2000-02-29 | California Institute Of Technology | Detection and treatment of duplex polynucleotide damage |
| US6300070B1 (en) | 1999-06-04 | 2001-10-09 | Mosaic Technologies, Inc. | Solid phase methods for amplifying multiple nucleic acids |
| US6642000B1 (en) | 1999-11-12 | 2003-11-04 | University Of Chicago | PCR amplification on microarrays of gel immobilized oligonucleotides |
| JP2003522963A (ja) * | 2000-02-18 | 2003-07-29 | アクララ バイオサイエンシーズ， インコーポレイテッド | 複数部位反応デバイスおよび方法 |
| US6586233B2 (en) | 2001-03-09 | 2003-07-01 | The Regents Of The University Of California | Convectively driven PCR thermal-cycling |
| EP1437368B8 (en) | 2001-10-16 | 2014-01-08 | Federalnoe Gosudarstvennoe Byudzhetnoe Uchrezhdenie Nauki Institut Molekulyarnoi Biologi Im. V.A. Engelgardta Rossiiskoi Akademii Nauk | Composition for polymerising immobilisation of biological molecules and method for producing said composition |
| DE60334471D1 (de) * | 2002-10-11 | 2010-11-18 | Univ Erasmus | Primer für nukleinsäureamplifikation in pcr-basierten klonalitätsstudien |
| JP4517114B2 (ja) * | 2003-03-28 | 2010-08-04 | 国立障害者リハビリテーションセンター総長 | ｃＤＮＡ合成方法 |
| KR100647289B1 (ko) * | 2004-09-15 | 2006-11-23 | 삼성전자주식회사 | 마랑고니 대류를 이용한 ｐｃｒ 장치 및 이를 이용한ｐｃｒ 방법 |
| US20060223122A1 (en) * | 2005-03-08 | 2006-10-05 | Agnes Fogo | Classifying and predicting glomerulosclerosis using a proteomics approach |
| GB2424946A (en) * | 2005-04-05 | 2006-10-11 | Stratec Biomedical Systems Ag | A detection system for substance binding using up-converting fluorescent probes |
| EP2458011B1 (en) * | 2005-10-03 | 2013-07-24 | Life Technologies Corporation | Compositions, methods, and kits for amplifying nucleic acids |
| US8114636B2 (en) * | 2006-02-10 | 2012-02-14 | Life Technologies Corporation | Labeling and detection of nucleic acids |
| SG170028A1 (en) * | 2006-02-24 | 2011-04-29 | Callida Genomics Inc | High throughput genome sequencing on dna arrays |
| US8735103B2 (en) | 2006-12-05 | 2014-05-27 | Electronics And Telecommunications Research Institute | Natural convection-driven PCR apparatus and method using disposable polymer chip |
| US8110353B2 (en) | 2007-02-05 | 2012-02-07 | California Institute Of Technology | Engineered toehold reactions and networks |
| US8043810B2 (en) | 2007-05-02 | 2011-10-25 | Eagle Eye Research, Inc. | Analyte detection using autocatalytic chain reactions |
| NZ582786A (en) * | 2007-07-23 | 2012-09-28 | Clondiag Gmbh | Assays for nucleic acids |
| CN101983236B (zh) | 2008-01-24 | 2014-03-12 | 基亚生物科技股份有限公司 | 热对流聚合酶连锁反应之方法及装置 |
| KR20100025328A (ko) * | 2008-08-27 | 2010-03-09 | 삼성전자주식회사 | 이중가닥 영역과 말단 단일가닥 영역을 포함하는 이중가닥 핵산 프로브가 고정된 마이크로어레이를 제조하는 방법 |
| US9074246B2 (en) * | 2010-01-25 | 2015-07-07 | Rd Biosciences, Inc. | Self-folding amplification of target nucleic acid |
| US9506112B2 (en) * | 2010-02-05 | 2016-11-29 | Siemens Healthcare Diagnostics Inc. | Increasing multiplex level by externalization of passive reference in polymerase chain reactions |
| PT2363502T (pt) * | 2010-03-04 | 2017-05-17 | Miacom Diagnostics Gmbh | Fish multiplex melhorado |
| JP5848337B2 (ja) | 2010-05-27 | 2016-01-27 | エメラルド セラピューティクス，インコーポレーテッド | 修飾した核酸を用いる情報伝播のシステムおよび方法 |
| AU2011319755B2 (en) * | 2010-10-27 | 2017-02-23 | President And Fellows Of Harvard College | Compositions of toehold primer duplexes and methods of use |
| WO2012162161A1 (en) * | 2011-05-20 | 2012-11-29 | Phthisis Diagnostics | Microsporidia detection system and method |
| US20140302486A1 (en) * | 2011-09-02 | 2014-10-09 | President And Fellows Of Harvard College | Systems and methods for detecting biomarkers of interest |
| JP6427753B2 (ja) * | 2013-09-11 | 2018-11-28 | 国立大学法人大阪大学 | 熱対流生成用チップ、熱対流生成装置、及び熱対流生成方法 |
| KR102242192B1 (ko) * | 2013-12-16 | 2021-04-20 | 윌리엄 마쉬 라이스 유니버시티 | 미세 조정된 초특정 핵산 하이브리다이제이션 프로브 |
| JP6967006B2 (ja) * | 2016-01-15 | 2021-11-17 | クアンタポール， インコーポレイテッド | 低減されたバックグラウンドの光学に基づくナノポア分析 |
-
2017
- 2017-03-28 PT PT177764537T patent/PT3436198T/pt unknown
- 2017-03-28 RU RU2018137800A patent/RU2018137800A/ru not_active Application Discontinuation
- 2017-03-28 KR KR1020187030052A patent/KR102472071B1/ko active Active
- 2017-03-28 EP EP17776453.7A patent/EP3436198B1/en active Active
- 2017-03-28 CN CN201780026551.7A patent/CN109477136A/zh active Pending
- 2017-03-28 ES ES17776453T patent/ES2920954T3/es active Active
- 2017-03-28 EP EP22156862.9A patent/EP4063014A1/en active Pending
- 2017-03-28 SG SG11201808493QA patent/SG11201808493QA/en unknown
- 2017-03-28 US US16/089,496 patent/US20200324292A1/en not_active Abandoned
- 2017-03-28 AU AU2017241766A patent/AU2017241766A1/en not_active Abandoned
- 2017-03-28 KR KR1020227041286A patent/KR102789837B1/ko active Active
- 2017-03-28 BR BR112018070197A patent/BR112018070197A2/pt not_active Application Discontinuation
- 2017-03-28 DK DK17776453.7T patent/DK3436198T3/da active
- 2017-03-28 WO PCT/US2017/024530 patent/WO2017172760A1/en not_active Ceased
- 2017-03-28 JP JP2018551295A patent/JP6998319B2/ja active Active
- 2017-03-28 CA CA3019422A patent/CA3019422A1/en active Pending
-
2018
- 2018-09-26 IL IL261980A patent/IL261980B2/en unknown
- 2018-09-28 PH PH12018502100A patent/PH12018502100A1/en unknown
-
2021
- 2021-12-20 JP JP2021205691A patent/JP2022037151A/ja not_active Withdrawn
-
2023
- 2023-06-23 AU AU2023203972A patent/AU2023203972A1/en not_active Abandoned
- 2023-08-14 US US18/449,422 patent/US20240278249A1/en active Pending
- 2023-11-10 JP JP2023192003A patent/JP2023184748A/ja active Pending
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