CA3173545A1 - Compositions, kits, and methods for detection of viral sequences - Google Patents
Compositions, kits, and methods for detection of viral sequencesInfo
- Publication number
- CA3173545A1 CA3173545A1 CA3173545A CA3173545A CA3173545A1 CA 3173545 A1 CA3173545 A1 CA 3173545A1 CA 3173545 A CA3173545 A CA 3173545A CA 3173545 A CA3173545 A CA 3173545A CA 3173545 A1 CA3173545 A1 CA 3173545A1
- Authority
- CA
- Canada
- Prior art keywords
- seq
- cov
- sars
- sample
- composition
- Prior art date
- Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
- Pending
Links
Classifications
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/70—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving virus or bacteriophage
- C12Q1/701—Specific hybridization probes
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
- C12Q1/6844—Nucleic acid amplification reactions
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q2537/00—Reactions characterised by the reaction format or use of a specific feature
- C12Q2537/10—Reactions characterised by the reaction format or use of a specific feature the purpose or use of
- C12Q2537/143—Multiplexing, i.e. use of multiple primers or probes in a single reaction, usually for simultaneously analyse of multiple analysis
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q2563/00—Nucleic acid detection characterized by the use of physical, structural and functional properties
- C12Q2563/107—Nucleic acid detection characterized by the use of physical, structural and functional properties fluorescence
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q2600/00—Oligonucleotides characterized by their use
- C12Q2600/16—Primer sets for multiplex assays
Landscapes
- Chemical & Material Sciences (AREA)
- Life Sciences & Earth Sciences (AREA)
- Organic Chemistry (AREA)
- Health & Medical Sciences (AREA)
- Zoology (AREA)
- Wood Science & Technology (AREA)
- Proteomics, Peptides & Aminoacids (AREA)
- Engineering & Computer Science (AREA)
- Immunology (AREA)
- Molecular Biology (AREA)
- Biochemistry (AREA)
- Microbiology (AREA)
- Biophysics (AREA)
- Analytical Chemistry (AREA)
- Physics & Mathematics (AREA)
- Genetics & Genomics (AREA)
- Biotechnology (AREA)
- Bioinformatics & Cheminformatics (AREA)
- General Engineering & Computer Science (AREA)
- General Health & Medical Sciences (AREA)
- Virology (AREA)
- Chemical Kinetics & Catalysis (AREA)
- Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
- Medicines Containing Material From Animals Or Micro-Organisms (AREA)
Applications Claiming Priority (19)
| Application Number | Priority Date | Filing Date | Title |
|---|---|---|---|
| US202062978274P | 2020-02-18 | 2020-02-18 | |
| US62/978,274 | 2020-02-18 | ||
| US202062981938P | 2020-02-26 | 2020-02-26 | |
| US62/981,938 | 2020-02-26 | ||
| US202063044160P | 2020-06-25 | 2020-06-25 | |
| US63/044,160 | 2020-06-25 | ||
| US202063052385P | 2020-07-15 | 2020-07-15 | |
| US63/052,385 | 2020-07-15 | ||
| US202062706081P | 2020-07-30 | 2020-07-30 | |
| US62/706,081 | 2020-07-30 | ||
| US202063198134P | 2020-09-30 | 2020-09-30 | |
| US63/198,134 | 2020-09-30 | ||
| US202063198421P | 2020-10-16 | 2020-10-16 | |
| US63/198,421 | 2020-10-16 | ||
| US202063199076P | 2020-12-04 | 2020-12-04 | |
| US63/199,076 | 2020-12-04 | ||
| US202163199570P | 2021-01-08 | 2021-01-08 | |
| US63/199,570 | 2021-01-08 | ||
| PCT/US2021/070163 WO2021168478A1 (en) | 2020-02-18 | 2021-02-18 | Compositions, kits and methods for detection of viral sequences |
Publications (1)
| Publication Number | Publication Date |
|---|---|
| CA3173545A1 true CA3173545A1 (en) | 2021-08-26 |
Family
ID=75540091
Family Applications (1)
| Application Number | Title | Priority Date | Filing Date |
|---|---|---|---|
| CA3173545A Pending CA3173545A1 (en) | 2020-02-18 | 2021-02-18 | Compositions, kits, and methods for detection of viral sequences |
Country Status (9)
| Country | Link |
|---|---|
| US (3) | US20210292856A1 (https=) |
| EP (2) | EP3911769B1 (https=) |
| JP (1) | JP7809644B2 (https=) |
| KR (1) | KR20220155998A (https=) |
| CN (1) | CN116113714A (https=) |
| AU (1) | AU2021224298A1 (https=) |
| BR (1) | BR112022016493A2 (https=) |
| CA (1) | CA3173545A1 (https=) |
| WO (1) | WO2021168478A1 (https=) |
Families Citing this family (19)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| ES2937927T3 (es) | 2018-01-29 | 2023-04-03 | St Jude Childrens Res Hospital Inc | Método para la amplificación de ácidos nucleicos |
| WO2021173310A1 (en) * | 2020-02-28 | 2021-09-02 | Avellino Lab Usa, Inc. | Methods for detection of severe acute respiratory syndrome coronavirus 2 |
| US20230130878A1 (en) * | 2020-03-13 | 2023-04-27 | The Translational Genomics Research Institute | Methods and kits for the detection of sars-cov-2 |
| WO2021183893A1 (en) * | 2020-03-13 | 2021-09-16 | The Translational Genomics Research Institute | Methods and kits for the detection of sars-cov-2 |
| US20220333215A1 (en) * | 2020-03-31 | 2022-10-20 | The Hopes Institute | Methods and compositions for detecting co-infection with sars-cov-2 and influenza a virus and/or influenza b virus |
| CA3178445A1 (en) * | 2020-03-31 | 2021-10-07 | BioSkryb Genomics, Inc. | Detection of low abundance viruses |
| US20210324486A1 (en) * | 2020-04-20 | 2021-10-21 | Thomas Jefferson University | Method and Primers for the Sensitive and Specific Detection of SARS-CoV-2 |
| JP2023536962A (ja) * | 2020-08-06 | 2023-08-30 | エフ． ホフマン－ラ ロシュ アーゲー | 重症急性呼吸器症候群コロナウイルス２（ｓａｒｓ－２）、インフルエンザａ及びインフルエンザｂの検出のための組成物及び方法 |
| WO2022072850A1 (en) * | 2020-10-02 | 2022-04-07 | Ohio State Innovation Foundation | Dna nanodevice hinge biosensors and methods of use thereof |
| EP4305188A4 (en) * | 2021-03-09 | 2025-01-29 | Blomquist, Robert, E. | EXTRACTION-FREE PATHOGEN TESTING METHODS |
| CN113801963B (zh) * | 2021-09-17 | 2024-03-26 | 佛山科学技术学院 | 一种检测冠状病毒的引物探针组合、试剂盒及方法 |
| JP7825255B2 (ja) * | 2021-09-22 | 2026-03-06 | 学校法人 名城大学 | 標的配列の検出方法及び標的配列の検出装置 |
| CN114134143A (zh) * | 2021-12-23 | 2022-03-04 | 郑州安图生物工程股份有限公司 | 检测标志物、引物、探针或其组合，以及检测试剂、检测试剂盒 |
| JP2023121264A (ja) * | 2022-02-21 | 2023-08-31 | 株式会社島津製作所 | 変異ウイルスの検出方法 |
| US20250297331A1 (en) * | 2022-03-10 | 2025-09-25 | Genxpro Gmbh | Methods for detecting genomic variants of sars-cov-2 in multiplex assays |
| US20250340890A1 (en) * | 2022-05-27 | 2025-11-06 | Bowling Green State University | Dna aptamers as universal inhibitors of spike protein/hace2 interactions |
| EP4317459A1 (en) * | 2022-08-04 | 2024-02-07 | National and Kapodistrian University of Athens | Method for the detection of sars-cov-2 by digital pcr |
| WO2024102839A1 (en) * | 2022-11-10 | 2024-05-16 | Life Technologies Corporation | Compositions, kits, and methods for detection of viral sequences |
| WO2025054605A1 (en) * | 2023-09-08 | 2025-03-13 | Rhode Island Hospital | Improved pcr primers for sars-cov-2 viremia |
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| US5618711A (en) | 1986-08-22 | 1997-04-08 | Hoffmann-La Roche Inc. | Recombinant expression vectors and purification methods for Thermus thermophilus DNA polymerase |
| US5079352A (en) | 1986-08-22 | 1992-01-07 | Cetus Corporation | Purified thermostable enzyme |
| US4889818A (en) | 1986-08-22 | 1989-12-26 | Cetus Corporation | Purified thermostable enzyme |
| US6127155A (en) | 1986-08-22 | 2000-10-03 | Roche Molecular Systems, Inc. | Stabilized thermostable nucleic acid polymerase compositions containing non-ionic polymeric detergents |
| US5210015A (en) | 1990-08-06 | 1993-05-11 | Hoffman-La Roche Inc. | Homogeneous assay system using the nuclease activity of a nucleic acid polymerase |
| US5994056A (en) | 1991-05-02 | 1999-11-30 | Roche Molecular Systems, Inc. | Homogeneous methods for nucleic acid amplification and detection |
| US5436134A (en) | 1993-04-13 | 1995-07-25 | Molecular Probes, Inc. | Cyclic-substituted unsymmetrical cyanine dyes |
| US5658751A (en) | 1993-04-13 | 1997-08-19 | Molecular Probes, Inc. | Substituted unsymmetrical cyanine dyes with selected permeability |
| US5538848A (en) | 1994-11-16 | 1996-07-23 | Applied Biosystems Division, Perkin-Elmer Corp. | Method for detecting nucleic acid amplification using self-quenching fluorescence probe |
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| US5801155A (en) | 1995-04-03 | 1998-09-01 | Epoch Pharmaceuticals, Inc. | Covalently linked oligonucleotide minor grove binder conjugates |
| US5773258A (en) | 1995-08-25 | 1998-06-30 | Roche Molecular Systems, Inc. | Nucleic acid amplification using a reversibly inactivated thermostable enzyme |
| EP1130114A1 (en) | 2000-03-03 | 2001-09-05 | Dr. van Haeringen Laboratorium B.V. | Universal variable fragments |
| ATE526418T1 (de) | 2002-08-05 | 2011-10-15 | Quanta Biosciences Inc | Verbesserte zusammensetzungen zur in-vitro- amplifikation von nukleinsäuren |
| MXPA06002077A (es) | 2003-08-22 | 2007-03-12 | Birch Biomedical Res Llc | Deteccion molecular multi-alelica de coronavirus asociado con sars. |
| AU2007281535A1 (en) | 2006-08-01 | 2008-02-07 | Applied Biosystems, Llc. | Detection of analytes and nucleic acids |
| CN101812532A (zh) * | 2009-02-24 | 2010-08-25 | 江苏默乐生物科技有限公司 | 呼吸道合胞病毒、腺病毒、副流感病毒和流感病毒检测引物和探针 |
| EP3859746B1 (en) | 2009-10-19 | 2024-10-16 | Labrador Diagnostics LLC | Integrated health data capture and analysis system |
| WO2013006793A2 (en) | 2011-07-06 | 2013-01-10 | Quest Diagnostics Investments Incorporated | Direct amplification and detection of viral and bacterial pathogens |
| US10253353B2 (en) | 2013-12-06 | 2019-04-09 | The Broad Institute, Inc. | Enhanced methods of ribonucleic acid hybridization |
| WO2017088169A1 (en) | 2015-11-27 | 2017-06-01 | Coyote Bioscience Co., Ltd. | Methods and systems for nucleic acid amplification |
| CN110468237B (zh) | 2016-03-10 | 2023-06-30 | 广州达安基因股份有限公司 | 检测中东呼吸综合征冠状病毒的引物探针混合液及试剂盒 |
| CN111406119A (zh) | 2017-06-28 | 2020-07-10 | 克罗玛科德公司 | 使用微滴式pcr系统的多重荧光测量 |
| GB201812428D0 (en) | 2018-07-31 | 2018-09-12 | Bg Res Ltd | Improved method for pathogen detection |
| JP2020080806A (ja) | 2018-11-30 | 2020-06-04 | 株式会社島津製作所 | Ｒｎａウイルス検出方法 |
| EP3977461A4 (en) | 2019-05-24 | 2023-06-28 | Clear Labs, Inc. | Methods and kits for detecting pathogens |
| WO2021159020A2 (en) * | 2020-02-06 | 2021-08-12 | Mammoth Biosciences, Inc. | Compositions and methods for detection of coronavirus |
| CN111088405A (zh) * | 2020-02-06 | 2020-05-01 | 苏州行知康众生物科技有限公司 | 用于检测冠状病毒2019-nCoV的引物探针组合物、试剂盒及方法 |
| CN111172239A (zh) | 2020-02-28 | 2020-05-19 | 上海思路迪医学检验所有限公司 | 一种病毒样本保存液、核酸提取试剂及病毒核酸提取方法 |
| CN111172327A (zh) | 2020-03-05 | 2020-05-19 | 杭州丹威生物科技有限公司 | 一种免提取新型冠状病毒核酸检测的方法与试剂盒 |
| CN111270013A (zh) * | 2020-03-12 | 2020-06-12 | 宁波海尔施基因科技有限公司 | 一种检测2019新型冠状病毒的多重实时荧光定量pcr试剂盒、方法及引物探针组合物 |
| CN111304368A (zh) | 2020-03-19 | 2020-06-19 | 艾康生物技术(杭州)有限公司 | 用于检测新型冠状病毒的方法、寡核苷酸和试剂盒 |
| CN111394513B (zh) | 2020-03-24 | 2023-05-12 | 中国医学科学院病原生物学研究所 | 新型冠状病毒SARS-CoV-2荧光定量PCR检测方法及其应用 |
| CN111206121A (zh) | 2020-03-31 | 2020-05-29 | 江苏达伯药业有限公司 | 一种用于检测新型冠状病毒orflab和S基因的试剂盒 |
| CN111321252B (zh) | 2020-04-17 | 2021-06-15 | 山东仕达思生物产业有限公司 | 一种具有抗突变性能的新型冠状病毒核酸检测引物对、试剂盒及其应用 |
| CN111394431B (zh) | 2020-05-26 | 2023-03-21 | 鲲石生物科技(深圳)有限公司 | 一种使用双重实时荧光等温扩增技术检测核酸的方法 |
| CN111471803A (zh) | 2020-05-29 | 2020-07-31 | 武汉生命之美科技有限公司 | 一种新型冠状病毒covid-19感染检测试剂盒 |
| CN111808988A (zh) | 2020-06-09 | 2020-10-23 | 广州市金圻睿生物科技有限责任公司 | 一种covid-19核酸释放剂及核酸检测试剂盒 |
| CN111748649A (zh) | 2020-06-13 | 2020-10-09 | 上海同进基因科技有限公司 | 一种同时检测人流感病毒与新型冠状病毒的荧光定量检测试剂盒 |
| CN111676325A (zh) | 2020-07-07 | 2020-09-18 | 云南科耀生物科技有限公司 | 一种用于检测SARS-CoV-2全基因组的引物组合及应用方法 |
| CN111850166A (zh) | 2020-07-10 | 2020-10-30 | 中国人民解放军总医院第五医学中心 | 一种大规模筛查新型冠状病毒感染人群的核酸检测方法及应用 |
| CN111733290A (zh) | 2020-07-16 | 2020-10-02 | 北京贝尔生物工程股份有限公司 | 一种检测新型冠状病毒及近缘冠状病毒的试剂盒及其制备方法 |
| CN112126713A (zh) | 2020-07-16 | 2020-12-25 | 上海之江生物科技股份有限公司 | 一种冠状病毒和流感病毒联合检测产品及其用途 |
| CN116254278B (zh) | 2020-07-25 | 2024-10-01 | 上海市公共卫生临床中心 | 一种rna病毒的靶点序列及其应用 |
| CN111808995A (zh) | 2020-07-29 | 2020-10-23 | 江苏宏微特斯医药科技有限公司 | 一种呼吸道病原体核酸检测试剂盒 |
| CN111733295B (zh) | 2020-07-31 | 2021-03-23 | 广州领上源生物科技有限公司 | 用于检测新型冠状病毒的引物组及试剂盒 |
| CN111778362A (zh) | 2020-08-10 | 2020-10-16 | 深圳容金科技有限公司 | 一种冻干的新型冠状病毒、流感病毒、肺炎病毒核酸检测试剂盒与检测方法 |
| CN111996290A (zh) | 2020-08-21 | 2020-11-27 | 上海交通大学医学院附属第九人民医院 | 基于多重PCR的SARS-CoV-2全基因组核酸扩增特异性引物 |
-
2021
- 2021-02-18 CN CN202180027966.2A patent/CN116113714A/zh active Pending
- 2021-02-18 AU AU2021224298A patent/AU2021224298A1/en active Pending
- 2021-02-18 EP EP21719513.0A patent/EP3911769B1/en active Active
- 2021-02-18 EP EP22162324.2A patent/EP4056719A1/en not_active Withdrawn
- 2021-02-18 BR BR112022016493A patent/BR112022016493A2/pt not_active IP Right Cessation
- 2021-02-18 JP JP2022549760A patent/JP7809644B2/ja active Active
- 2021-02-18 US US17/249,071 patent/US20210292856A1/en active Pending
- 2021-02-18 KR KR1020227032162A patent/KR20220155998A/ko active Pending
- 2021-02-18 CA CA3173545A patent/CA3173545A1/en active Pending
- 2021-02-18 WO PCT/US2021/070163 patent/WO2021168478A1/en not_active Ceased
- 2021-05-14 US US17/320,659 patent/US11214843B2/en active Active
-
2022
- 2022-01-03 US US17/567,411 patent/US12065707B2/en active Active
Also Published As
| Publication number | Publication date |
|---|---|
| BR112022016493A2 (pt) | 2022-10-25 |
| US12065707B2 (en) | 2024-08-20 |
| US20210292856A1 (en) | 2021-09-23 |
| JP2023513955A (ja) | 2023-04-04 |
| WO2021168478A1 (en) | 2021-08-26 |
| EP4056719A1 (en) | 2022-09-14 |
| AU2021224298A1 (en) | 2022-09-22 |
| CN116113714A (zh) | 2023-05-12 |
| US11214843B2 (en) | 2022-01-04 |
| KR20220155998A (ko) | 2022-11-24 |
| US20220186328A1 (en) | 2022-06-16 |
| JP7809644B2 (ja) | 2026-02-02 |
| US20210292857A1 (en) | 2021-09-23 |
| EP3911769A1 (en) | 2021-11-24 |
| EP3911769B1 (en) | 2022-11-02 |
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