AU2008289447B2 - Methods of using miRNA for detection of in vivo cell death - Google Patents
Methods of using miRNA for detection of in vivo cell death Download PDFInfo
- Publication number
- AU2008289447B2 AU2008289447B2 AU2008289447A AU2008289447A AU2008289447B2 AU 2008289447 B2 AU2008289447 B2 AU 2008289447B2 AU 2008289447 A AU2008289447 A AU 2008289447A AU 2008289447 A AU2008289447 A AU 2008289447A AU 2008289447 B2 AU2008289447 B2 AU 2008289447B2
- Authority
- AU
- Australia
- Prior art keywords
- mirna
- urine
- specific
- sample
- urine sample
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- Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
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Classifications
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- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/70—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving virus or bacteriophage
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- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
- C12Q1/6876—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes
- C12Q1/6883—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for diseases caused by alterations of genetic material
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/70—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving virus or bacteriophage
- C12Q1/701—Specific hybridization probes
- C12Q1/705—Specific hybridization probes for herpetoviridae, e.g. herpes simplex, varicella zoster
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q2600/00—Oligonucleotides characterized by their use
- C12Q2600/118—Prognosis of disease development
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q2600/00—Oligonucleotides characterized by their use
- C12Q2600/158—Expression markers
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q2600/00—Oligonucleotides characterized by their use
- C12Q2600/178—Oligonucleotides characterized by their use miRNA, siRNA or ncRNA
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- Chemical & Material Sciences (AREA)
- Life Sciences & Earth Sciences (AREA)
- Health & Medical Sciences (AREA)
- Organic Chemistry (AREA)
- Proteomics, Peptides & Aminoacids (AREA)
- Engineering & Computer Science (AREA)
- Zoology (AREA)
- Wood Science & Technology (AREA)
- Analytical Chemistry (AREA)
- Genetics & Genomics (AREA)
- Immunology (AREA)
- Bioinformatics & Cheminformatics (AREA)
- Microbiology (AREA)
- Molecular Biology (AREA)
- Physics & Mathematics (AREA)
- Biotechnology (AREA)
- Biochemistry (AREA)
- Biophysics (AREA)
- General Engineering & Computer Science (AREA)
- General Health & Medical Sciences (AREA)
- Pathology (AREA)
- Virology (AREA)
- Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
Priority Applications (1)
| Application Number | Priority Date | Filing Date | Title |
|---|---|---|---|
| AU2014210676A AU2014210676B2 (en) | 2007-08-22 | 2014-08-11 | Methods of Using miRNA for Detection of In Vivo Cell Death |
Applications Claiming Priority (3)
| Application Number | Priority Date | Filing Date | Title |
|---|---|---|---|
| US96587107P | 2007-08-22 | 2007-08-22 | |
| US60/965,871 | 2007-08-22 | ||
| PCT/US2008/009991 WO2009025852A2 (en) | 2007-08-22 | 2008-08-22 | Methods of using mirna for detection of in vivo cell death |
Related Child Applications (1)
| Application Number | Title | Priority Date | Filing Date |
|---|---|---|---|
| AU2014210676A Division AU2014210676B2 (en) | 2007-08-22 | 2014-08-11 | Methods of Using miRNA for Detection of In Vivo Cell Death |
Publications (2)
| Publication Number | Publication Date |
|---|---|
| AU2008289447A1 AU2008289447A1 (en) | 2009-02-26 |
| AU2008289447B2 true AU2008289447B2 (en) | 2014-09-04 |
Family
ID=40378881
Family Applications (2)
| Application Number | Title | Priority Date | Filing Date |
|---|---|---|---|
| AU2008289447A Ceased AU2008289447B2 (en) | 2007-08-22 | 2008-08-22 | Methods of using miRNA for detection of in vivo cell death |
| AU2014210676A Ceased AU2014210676B2 (en) | 2007-08-22 | 2014-08-11 | Methods of Using miRNA for Detection of In Vivo Cell Death |
Family Applications After (1)
| Application Number | Title | Priority Date | Filing Date |
|---|---|---|---|
| AU2014210676A Ceased AU2014210676B2 (en) | 2007-08-22 | 2014-08-11 | Methods of Using miRNA for Detection of In Vivo Cell Death |
Country Status (16)
| Country | Link |
|---|---|
| US (4) | US8486626B2 (enExample) |
| EP (2) | EP2612926B1 (enExample) |
| JP (1) | JP5416110B2 (enExample) |
| CN (2) | CN101861399B (enExample) |
| AU (2) | AU2008289447B2 (enExample) |
| CA (1) | CA2696403C (enExample) |
| CY (1) | CY1114111T1 (enExample) |
| DK (2) | DK2195450T4 (enExample) |
| ES (2) | ES2660785T3 (enExample) |
| HR (1) | HRP20130618T1 (enExample) |
| HU (1) | HUE019019T5 (enExample) |
| NO (1) | NO2612926T3 (enExample) |
| PL (2) | PL2195450T3 (enExample) |
| PT (2) | PT2195450E (enExample) |
| TR (1) | TR201802758T4 (enExample) |
| WO (1) | WO2009025852A2 (enExample) |
Families Citing this family (44)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| EP2271931A4 (en) * | 2008-04-25 | 2011-10-12 | Merck Sharp & Dohme | MICRO-RNA BIOMARKERS FOR TISSUE INJURIES |
| WO2010004562A2 (en) * | 2008-07-09 | 2010-01-14 | Rosetta Genomics Ltd. | Methods and compositions for detecting colorectal cancer |
| ES2532153T3 (es) * | 2008-07-18 | 2015-03-24 | Trovagene, Inc. | Métodos para la detección de secuencias de ácidos nucleicos "ultracortos" basados en PCR |
| EP2419536A4 (en) * | 2009-04-14 | 2012-09-05 | Merck Sharp & Dohme | MICRO RNA AS A BIOMARKER FOR IMPROVING BETAZELLES IN THE PANCREAS ISLANDS |
| CA2767616A1 (en) | 2009-07-09 | 2011-01-13 | The Scripps Research Institute | Gene expression profiles associated with chronic allograft nephropathy |
| WO2011057003A2 (en) | 2009-11-04 | 2011-05-12 | Samuil Umansky | Methods of using small rna from bodily fluids for diagnosis and monitoring of neurodegenerative diseases |
| DK2496720T3 (da) * | 2009-11-06 | 2020-09-28 | Univ Leland Stanford Junior | Ikke-invasiv diagnose af transplantatafstødning i organ-transplanterede patienter |
| SG185544A1 (en) * | 2010-05-14 | 2012-12-28 | Fluidigm Corp | Nucleic acid isolation methods |
| JP6211511B2 (ja) | 2011-04-18 | 2017-10-11 | ディアミール, エルエルシーDiamir, Llc | miRNAに基づくユニバーサルスクリーニングテスト(UST) |
| CN102188719B (zh) * | 2011-05-12 | 2012-12-19 | 南方医科大学 | EB病毒miR-BART3反义寡聚核苷酸在制备治疗鼻咽癌的药物中的应用 |
| CA2840196C (en) | 2011-06-27 | 2022-09-20 | Eisai R&D Management Co., Ltd. | Microrna biomarkers indicative of alzheimer's disease |
| WO2013022953A2 (en) * | 2011-08-08 | 2013-02-14 | Eugenia Wang | Biomarker for alzheimer's disease and/or mild cognitively impairment, and use thereof |
| CA3069089A1 (en) * | 2011-09-22 | 2013-03-28 | Lineage Biosciences, Inc. | Compositions and methods for analyzing heterogeneous samples |
| ITRM20110685A1 (it) | 2011-12-23 | 2013-06-24 | Internat Ct For Genetic En Gineering And | Microrna per la rigenerazione cardiaca attraverso l induzione della proliferazione dei miociti cardiaci |
| EP3584327A1 (en) * | 2012-01-27 | 2019-12-25 | The Board of Trustees of the Leland Stanford Junior University | Methods for profiling and quantitating cell-free rna |
| US20160289762A1 (en) | 2012-01-27 | 2016-10-06 | The Board Of Trustees Of The Leland Stanford Junior University | Methods for profiliing and quantitating cell-free rna |
| US20140087964A1 (en) * | 2012-09-24 | 2014-03-27 | University Of Virginia Patent Foundation | Compositions and methods for detecting aberrant regulation, expression, and levels of hgh |
| EP2733219B1 (en) | 2012-11-16 | 2017-09-20 | Siemens Aktiengesellschaft | Diagnostic miRNA markers for Alzheimer |
| US10011873B2 (en) | 2012-11-16 | 2018-07-03 | Universitat Des Saarlandes | Diagnostic miRNA markers for Parkinson disease |
| EP2733220B1 (en) | 2012-11-16 | 2017-10-18 | Siemens Aktiengesellschaft | Novel miRNA as a diagnostic marker for Alzheimer's Disease |
| CN103045596A (zh) * | 2012-12-20 | 2013-04-17 | 徐勇 | 唐氏综合征21号染色体相关miRNA、基因、筛选方法和应用 |
| CN103045736B (zh) * | 2012-12-20 | 2014-09-17 | 徐勇 | 唐氏综合征21号染色体miRNA差异表达图谱模型、构建方法及应用 |
| EP2759602A1 (en) | 2013-01-25 | 2014-07-30 | Charité - Universitätsmedizin Berlin | Non-invasive prenatal genetic diagnostic methods |
| EP2970959B1 (en) | 2013-03-15 | 2018-05-30 | Lineage Biosciences, Inc. | Methods and compositions for tagging and analyzing samples |
| CN105917005B (zh) | 2013-11-18 | 2020-09-11 | 迪阿米尔有限责任公司 | 使用来自体液的miRNA检测和监控帕金森病(PD)的方法 |
| US10443100B2 (en) | 2014-05-22 | 2019-10-15 | The Scripps Research Institute | Gene expression profiles associated with sub-clinical kidney transplant rejection |
| US11104951B2 (en) | 2014-05-22 | 2021-08-31 | The Scripps Research Institute | Molecular signatures for distinguishing liver transplant rejections or injuries |
| TWI758011B (zh) | 2014-07-18 | 2022-03-11 | 香港中文大學 | Dna混合物中之組織甲基化模式分析 |
| EP3298169B1 (en) | 2015-05-18 | 2024-10-02 | Karius, Inc. | Compositions and methods for enriching populations of nucleic acids |
| US10428391B2 (en) | 2015-07-27 | 2019-10-01 | The Johns Hopkins University | Method to use viral and host methylation markers for cervical cancer screening and triage in liquid prep, serum/plasma, and urine: PCR and sequencing based process methods |
| WO2017044710A1 (en) * | 2015-09-11 | 2017-03-16 | Corning Incorporated | Compositions and methods for nucleic acid purification from blood samples |
| US10975436B2 (en) | 2016-01-05 | 2021-04-13 | Diamir, Llc | Methods of using miRNA from bodily fluids for diagnosis and monitoring of neurodevelopmental disorders |
| EP3433381B1 (en) | 2016-03-21 | 2024-07-24 | Diamir, LLC | Methods of using mirnas from bodily fluids for detection and differentiation of neurodegenerative diseases |
| WO2018045359A1 (en) * | 2016-09-02 | 2018-03-08 | Karius, Inc. | Detection and treatment of infection during pregnancy |
| US11001891B2 (en) | 2016-11-14 | 2021-05-11 | Berg Llc | Methods for treating Parkinson's disease |
| IL266347B2 (en) | 2016-11-30 | 2025-01-01 | Univ Hong Kong Chinese | Analysis of cell-free DNA in urine and other samples |
| US10907211B1 (en) | 2017-02-16 | 2021-02-02 | Quantgene Inc. | Methods and compositions for detecting cancer biomarkers in bodily fluids |
| US10781487B2 (en) | 2017-07-24 | 2020-09-22 | Diamir, Llc | miRNA-based methods for detecting and monitoring aging |
| SG11202003588QA (en) | 2017-09-20 | 2020-05-28 | Molecular Stethoscope Inc | Methods and systems for detecting tissue conditions |
| GB2615975B (en) | 2019-02-14 | 2023-11-29 | Mirvie Inc | Methods and systems for determining a pregnancy-related state of a subject |
| WO2021085505A1 (ja) * | 2019-10-29 | 2021-05-06 | 国立研究開発法人 国立循環器病研究センター | 脳梗塞治療支援システム |
| US11211144B2 (en) | 2020-02-18 | 2021-12-28 | Tempus Labs, Inc. | Methods and systems for refining copy number variation in a liquid biopsy assay |
| US11211147B2 (en) | 2020-02-18 | 2021-12-28 | Tempus Labs, Inc. | Estimation of circulating tumor fraction using off-target reads of targeted-panel sequencing |
| US11475981B2 (en) | 2020-02-18 | 2022-10-18 | Tempus Labs, Inc. | Methods and systems for dynamic variant thresholding in a liquid biopsy assay |
Citations (1)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| US6251638B1 (en) * | 1997-05-30 | 2001-06-26 | Diagen Corporation | Methods for detection of nucleic acid sequences in urine |
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| US5856088A (en) | 1989-07-11 | 1999-01-05 | Gen-Probe Incorporated | Detection of human immunodeficiency virus type 1 |
| US5168039A (en) | 1990-09-28 | 1992-12-01 | The Board Of Trustees Of The University Of Arkansas | Repetitive DNA sequence specific for mycobacterium tuberculosis to be used for the diagnosis of tuberculosis |
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| CA2167693C (en) | 1993-07-20 | 2007-01-30 | Ulrich Bogdahn | Melanoma-inhibiting protein |
| AU7375794A (en) | 1993-07-28 | 1995-02-28 | Akzo Nobel N.V. | Process for isolating nucleic acid from gram positive microorganisms |
| JP3696238B2 (ja) | 1993-08-30 | 2005-09-14 | プロメガ・コーポレイシヨン | 核酸精製用組成物及び方法 |
| US5631130A (en) | 1994-05-13 | 1997-05-20 | Abbott Laboratories | Materials and methods for the detection of Mycobacterium tuberculosis |
| ATE261496T1 (de) | 1994-06-09 | 2004-03-15 | Innogenetics Nv | Verfahren zum nachweis des antibiotikaresistenzspektrums von mykobakterium spezies |
| US5731150A (en) | 1995-11-01 | 1998-03-24 | Chiron Diagnostic Corporation | IS6110 based molecular detection of mycobacterium tuberculosis |
| US6027945A (en) | 1997-01-21 | 2000-02-22 | Promega Corporation | Methods of isolating biological target materials using silica magnetic particles |
| US6492144B1 (en) | 1997-05-30 | 2002-12-10 | Diagen Corporation | Methods for detection of nucleic acid sequences in urine |
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| EP1885877A2 (en) | 2005-02-17 | 2008-02-13 | Istituto Nazionale per le Malattie Infettive "Lazzaro Spallanzani" IRCCS | Compositions and methods for detecting pathogen specific nucleic acids in urine |
| CA2597948A1 (en) | 2005-02-17 | 2006-08-24 | Istituto Nazionale Per Le Malattie Infettive Irccs Lazzaro Spallanzani | Compositions and methods for detecting viral specific nucleic acids in urine |
| US20060292616A1 (en) * | 2005-06-23 | 2006-12-28 | U.S. Genomics, Inc. | Single molecule miRNA-based disease diagnostic methods |
| DE102005059315A1 (de) * | 2005-12-09 | 2007-06-14 | Qiagen Gmbh | Verfahren zur Anreicherung von kurzkettigen Nukleinsäuren |
| US20070202511A1 (en) * | 2006-02-28 | 2007-08-30 | Sigma-Aldrich Co. | Methods and compositions for the rapid isolation of small RNA molecules |
| ES2532153T3 (es) | 2008-07-18 | 2015-03-24 | Trovagene, Inc. | Métodos para la detección de secuencias de ácidos nucleicos "ultracortos" basados en PCR |
-
2008
- 2008-08-22 WO PCT/US2008/009991 patent/WO2009025852A2/en not_active Ceased
- 2008-08-22 PL PL08795523T patent/PL2195450T3/pl unknown
- 2008-08-22 CA CA2696403A patent/CA2696403C/en not_active Expired - Fee Related
- 2008-08-22 US US12/229,378 patent/US8486626B2/en not_active Expired - Fee Related
- 2008-08-22 NO NO13161985A patent/NO2612926T3/no unknown
- 2008-08-22 JP JP2010521887A patent/JP5416110B2/ja not_active Expired - Fee Related
- 2008-08-22 PL PL13161985T patent/PL2612926T3/pl unknown
- 2008-08-22 AU AU2008289447A patent/AU2008289447B2/en not_active Ceased
- 2008-08-22 CN CN200880113585.0A patent/CN101861399B/zh not_active Expired - Fee Related
- 2008-08-22 ES ES13161985.0T patent/ES2660785T3/es active Active
- 2008-08-22 TR TR2018/02758T patent/TR201802758T4/tr unknown
- 2008-08-22 HU HUE08795523A patent/HUE019019T5/en unknown
- 2008-08-22 HR HRP20130618AT patent/HRP20130618T1/hr unknown
- 2008-08-22 PT PT87955233T patent/PT2195450E/pt unknown
- 2008-08-22 CN CN201510649676.8A patent/CN105400868B/zh not_active Expired - Fee Related
- 2008-08-22 PT PT131619850T patent/PT2612926T/pt unknown
- 2008-08-22 DK DK08795523.3T patent/DK2195450T4/en active
- 2008-08-22 EP EP13161985.0A patent/EP2612926B1/en not_active Not-in-force
- 2008-08-22 EP EP08795523.3A patent/EP2195450B2/en not_active Not-in-force
- 2008-08-22 DK DK13161985.0T patent/DK2612926T3/en active
- 2008-08-22 ES ES08795523.3T patent/ES2415245T5/es active Active
-
2013
- 2013-07-03 CY CY20131100546T patent/CY1114111T1/el unknown
- 2013-07-16 US US13/942,706 patent/US20150197805A1/en not_active Abandoned
-
2014
- 2014-08-11 AU AU2014210676A patent/AU2014210676B2/en not_active Ceased
-
2017
- 2017-01-06 US US15/400,157 patent/US20180135126A1/en not_active Abandoned
-
2018
- 2018-09-21 US US16/138,338 patent/US20200283851A1/en not_active Abandoned
Patent Citations (1)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| US6251638B1 (en) * | 1997-05-30 | 2001-06-26 | Diagen Corporation | Methods for detection of nucleic acid sequences in urine |
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| Date | Code | Title | Description |
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| DA3 | Amendments made section 104 |
Free format text: THE NATURE OF THE AMENDMENT IS: AMEND THE NAME OF THE CO-INVENTOR FROM SHEKHTMAN, EUGENE M. TO SCHEINKER, VLADIMIR S. |
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| FGA | Letters patent sealed or granted (standard patent) | ||
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