JP2002534966A5 - - Google Patents
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- JP2002534966A5 JP2002534966A5 JP2000594068A JP2000594068A JP2002534966A5 JP 2002534966 A5 JP2002534966 A5 JP 2002534966A5 JP 2000594068 A JP2000594068 A JP 2000594068A JP 2000594068 A JP2000594068 A JP 2000594068A JP 2002534966 A5 JP2002534966 A5 JP 2002534966A5
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- Prior art keywords
- oligonucleotides
- family gene
- gene shuffling
- nucleic acid
- nucleic acids
- Prior art date
- Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
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- 229920000272 Oligonucleotide Polymers 0.000 description 16
- 108020004707 nucleic acids Proteins 0.000 description 14
- 150000007523 nucleic acids Chemical class 0.000 description 14
- 108090000623 proteins and genes Proteins 0.000 description 2
- 102000004169 proteins and genes Human genes 0.000 description 2
- 238000000137 annealing Methods 0.000 description 1
- 230000000875 corresponding Effects 0.000 description 1
- 230000002194 synthesizing Effects 0.000 description 1
- 230000001225 therapeutic Effects 0.000 description 1
Description
【特許請求の範囲】
【請求項1】 タンパク質をコードする相同核酸を組換える方法であって、該方法は、
a)重複しているファミリー遺伝子シャッフリングオリゴヌクレオチドのセットを合成する工程であって、各オリゴヌクレオチドは、選択された相同核酸セットのうちの少なくとも1つのメンバーに対して配列同一性領域を有し、該選択された相同核酸セットのうちの別のメンバーに対応するオリゴヌクレオチドが、非等モル量で存在する、工程;
b)該ファミリー遺伝子シャッフリングオリゴヌクレオチドのセットをハイブリダイズする工程;
c)該ファミリー遺伝子シャッフリングオリゴヌクレオチドのセットを伸長することにより、組み換えた核酸の集団を提供する工程;
d)該組み換えた核酸の集団を変性させることにより、変性した組換え核酸を提供する工程;
e)該変性した組換え核酸を再アニーリングする工程;
f)得られた再アニーリングした組換え核酸を伸長させる工程;および、
g)所望される特性について該得られた組換え核酸のうちの1つ以上を選択する工程、
を包含する、方法。
【請求項2】 請求項1に記載の方法であって、
h)前記得られた選択された組換え核酸を組換え、そして得られた複数回選択され複数回組換えられた核酸を、所望される形質または特性について選択する工程、
をさらに包含する、方法。
【請求項3】 請求項1に記載の方法であって、前記ファミリー遺伝子シャッフリングオリゴヌクレオチドのセットは、複数の相同標的核酸に由来するコンセンサス領域のサブ領域を含む複数のオリゴヌクレオチドメンバー型を含む、方法。
【請求項4】 請求項1に記載の方法であって、前記ファミリー遺伝子シャッフリングオリゴヌクレオチドのセットは、複数のコドン改変オリゴヌクレオチドを含む、方法。
【請求項5】 請求項1に記載の方法であって、前記複数のオリゴヌクレオチドメンバー型を含むファミリー遺伝子シャッフリングオリゴヌクレオチドのセットは、少なくとも3つのメンバー型を含む、方法。
【請求項6】 請求項1に記載の方法であって、前記複数のオリゴヌクレオチドメンバー型を含むファミリー遺伝子シャッフリングオリゴヌクレオチドのセットは、少なくとも5つのメンバー型を含む、方法。
【請求項7】 請求項1に記載の方法であって、前記複数のオリゴヌクレオチドメンバー型を含むファミリー遺伝子シャッフリングオリゴヌクレオチドのセットは、少なくとも10のメンバー型を含む、方法。
【請求項8】 請求項1に記載の方法であって、前記オリゴヌクレオチドは、集合的に、前記相同核酸の各々の全長に対応する、方法。
【請求項9】 請求項1〜8のうちのいずれか1項に記載の方法であって、前記核酸は、治療的タンパク質をコードする、方法。
【請求項1】 タンパク質をコードする相同核酸を組換える方法であって、該方法は、
a)重複しているファミリー遺伝子シャッフリングオリゴヌクレオチドのセットを合成する工程であって、各オリゴヌクレオチドは、選択された相同核酸セットのうちの少なくとも1つのメンバーに対して配列同一性領域を有し、該選択された相同核酸セットのうちの別のメンバーに対応するオリゴヌクレオチドが、非等モル量で存在する、工程;
b)該ファミリー遺伝子シャッフリングオリゴヌクレオチドのセットをハイブリダイズする工程;
c)該ファミリー遺伝子シャッフリングオリゴヌクレオチドのセットを伸長することにより、組み換えた核酸の集団を提供する工程;
d)該組み換えた核酸の集団を変性させることにより、変性した組換え核酸を提供する工程;
e)該変性した組換え核酸を再アニーリングする工程;
f)得られた再アニーリングした組換え核酸を伸長させる工程;および、
g)所望される特性について該得られた組換え核酸のうちの1つ以上を選択する工程、
を包含する、方法。
【請求項2】 請求項1に記載の方法であって、
h)前記得られた選択された組換え核酸を組換え、そして得られた複数回選択され複数回組換えられた核酸を、所望される形質または特性について選択する工程、
をさらに包含する、方法。
【請求項3】 請求項1に記載の方法であって、前記ファミリー遺伝子シャッフリングオリゴヌクレオチドのセットは、複数の相同標的核酸に由来するコンセンサス領域のサブ領域を含む複数のオリゴヌクレオチドメンバー型を含む、方法。
【請求項4】 請求項1に記載の方法であって、前記ファミリー遺伝子シャッフリングオリゴヌクレオチドのセットは、複数のコドン改変オリゴヌクレオチドを含む、方法。
【請求項5】 請求項1に記載の方法であって、前記複数のオリゴヌクレオチドメンバー型を含むファミリー遺伝子シャッフリングオリゴヌクレオチドのセットは、少なくとも3つのメンバー型を含む、方法。
【請求項6】 請求項1に記載の方法であって、前記複数のオリゴヌクレオチドメンバー型を含むファミリー遺伝子シャッフリングオリゴヌクレオチドのセットは、少なくとも5つのメンバー型を含む、方法。
【請求項7】 請求項1に記載の方法であって、前記複数のオリゴヌクレオチドメンバー型を含むファミリー遺伝子シャッフリングオリゴヌクレオチドのセットは、少なくとも10のメンバー型を含む、方法。
【請求項8】 請求項1に記載の方法であって、前記オリゴヌクレオチドは、集合的に、前記相同核酸の各々の全長に対応する、方法。
【請求項9】 請求項1〜8のうちのいずれか1項に記載の方法であって、前記核酸は、治療的タンパク質をコードする、方法。
Applications Claiming Priority (17)
Application Number | Priority Date | Filing Date | Title |
---|---|---|---|
US11644799P | 1999-01-19 | 1999-01-19 | |
US60/116,447 | 1999-01-19 | ||
US11881399P | 1999-02-05 | 1999-02-05 | |
US11885499P | 1999-02-05 | 1999-02-05 | |
US60/118,813 | 1999-02-05 | ||
US60/118,854 | 1999-02-05 | ||
US14104999P | 1999-06-24 | 1999-06-24 | |
US60/141,049 | 1999-06-24 | ||
US09/408,393 US6436675B1 (en) | 1999-09-28 | 1999-09-28 | Use of codon-varied oligonucleotide synthesis for synthetic shuffling |
US09/408,392 | 1999-09-28 | ||
US09/408,392 US6376246B1 (en) | 1999-02-05 | 1999-09-28 | Oligonucleotide mediated nucleic acid recombination |
US09/408,393 | 1999-09-28 | ||
US41637599A | 1999-10-12 | 1999-10-12 | |
US41683799A | 1999-10-12 | 1999-10-12 | |
US09/416,837 | 1999-10-12 | ||
US09/416,375 | 1999-10-12 | ||
PCT/US2000/001203 WO2000042561A2 (en) | 1999-01-19 | 2000-01-18 | Oligonucleotide mediated nucleic acid recombination |
Related Child Applications (1)
Application Number | Title | Priority Date | Filing Date |
---|---|---|---|
JP2010095500A Division JP2010178757A (ja) | 1999-01-19 | 2010-04-16 | オリゴヌクレオチド媒介核酸組換え |
Publications (2)
Publication Number | Publication Date |
---|---|
JP2002534966A JP2002534966A (ja) | 2002-10-22 |
JP2002534966A5 true JP2002534966A5 (ja) | 2007-02-22 |
Family
ID=27574833
Family Applications (2)
Application Number | Title | Priority Date | Filing Date |
---|---|---|---|
JP2000594068A Pending JP2002534966A (ja) | 1999-01-19 | 2000-01-18 | オリゴヌクレオチド媒介核酸組換え |
JP2000594067A Withdrawn JP2002534965A (ja) | 1999-01-19 | 2000-01-18 | 所望の特徴を有する文字ストリング、ポリヌクレオチドおよびポリペプチドを作製するための方法 |
Family Applications After (1)
Application Number | Title | Priority Date | Filing Date |
---|---|---|---|
JP2000594067A Withdrawn JP2002534965A (ja) | 1999-01-19 | 2000-01-18 | 所望の特徴を有する文字ストリング、ポリヌクレオチドおよびポリペプチドを作製するための方法 |
Country Status (11)
Country | Link |
---|---|
US (1) | US7058515B1 (ja) |
EP (6) | EP1108783A3 (ja) |
JP (2) | JP2002534966A (ja) |
AT (1) | ATE465459T1 (ja) |
AU (2) | AU3210100A (ja) |
CA (2) | CA2320714A1 (ja) |
DE (1) | DE60044223D1 (ja) |
DK (1) | DK1072010T3 (ja) |
ES (1) | ES2341217T3 (ja) |
IL (2) | IL138002A0 (ja) |
WO (2) | WO2000042560A2 (ja) |
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