ES2665500T3 - Enriquecimiento de una PCR por COLD completa con secuencia de bloqueo de referencia - Google Patents
Enriquecimiento de una PCR por COLD completa con secuencia de bloqueo de referencia Download PDFInfo
- Publication number
- ES2665500T3 ES2665500T3 ES11709836.8T ES11709836T ES2665500T3 ES 2665500 T3 ES2665500 T3 ES 2665500T3 ES 11709836 T ES11709836 T ES 11709836T ES 2665500 T3 ES2665500 T3 ES 2665500T3
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- sequence
- target
- reaction mixture
- temperature
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Classifications
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- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
- C12Q1/6844—Nucleic acid amplification reactions
- C12Q1/6858—Allele-specific amplification
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
- C12Q1/6844—Nucleic acid amplification reactions
- C12Q1/6848—Nucleic acid amplification reactions characterised by the means for preventing contamination or increasing the specificity or sensitivity of an amplification reaction
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q2527/00—Reactions demanding special reaction conditions
- C12Q2527/107—Temperature of melting, i.e. Tm
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- Chemical & Material Sciences (AREA)
- Organic Chemistry (AREA)
- Life Sciences & Earth Sciences (AREA)
- Engineering & Computer Science (AREA)
- Zoology (AREA)
- Wood Science & Technology (AREA)
- Health & Medical Sciences (AREA)
- Proteomics, Peptides & Aminoacids (AREA)
- Chemical Kinetics & Catalysis (AREA)
- Bioinformatics & Cheminformatics (AREA)
- Immunology (AREA)
- Microbiology (AREA)
- Molecular Biology (AREA)
- Biotechnology (AREA)
- Biochemistry (AREA)
- General Engineering & Computer Science (AREA)
- General Health & Medical Sciences (AREA)
- Genetics & Genomics (AREA)
- Biophysics (AREA)
- Analytical Chemistry (AREA)
- Physics & Mathematics (AREA)
- Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
- Apparatus Associated With Microorganisms And Enzymes (AREA)
Applications Claiming Priority (3)
| Application Number | Priority Date | Filing Date | Title |
|---|---|---|---|
| US31164210P | 2010-03-08 | 2010-03-08 | |
| US311642P | 2010-03-08 | ||
| PCT/US2011/027473 WO2011112534A1 (en) | 2010-03-08 | 2011-03-08 | Full cold-pcr enrichment with reference blocking sequence |
Publications (1)
| Publication Number | Publication Date |
|---|---|
| ES2665500T3 true ES2665500T3 (es) | 2018-04-26 |
Family
ID=43983637
Family Applications (1)
| Application Number | Title | Priority Date | Filing Date |
|---|---|---|---|
| ES11709836.8T Active ES2665500T3 (es) | 2010-03-08 | 2011-03-08 | Enriquecimiento de una PCR por COLD completa con secuencia de bloqueo de referencia |
Country Status (10)
| Country | Link |
|---|---|
| US (3) | US8623603B2 (https=) |
| EP (1) | EP2545189B1 (https=) |
| JP (1) | JP5795341B2 (https=) |
| KR (2) | KR101550489B1 (https=) |
| CN (1) | CN102859003B (https=) |
| AU (1) | AU2011224534B2 (https=) |
| CA (1) | CA2792433C (https=) |
| DK (1) | DK2545189T3 (https=) |
| ES (1) | ES2665500T3 (https=) |
| WO (1) | WO2011112534A1 (https=) |
Families Citing this family (47)
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| AU2011319755B2 (en) | 2010-10-27 | 2017-02-23 | President And Fellows Of Harvard College | Compositions of toehold primer duplexes and methods of use |
| AU2012223438A1 (en) | 2011-02-28 | 2013-09-26 | Transgenomic, Inc | Kit and method for sequencing a target DNA in a mixed population |
| EP3333269B1 (en) * | 2011-03-31 | 2021-05-05 | Dana-Farber Cancer Institute, Inc. | Methods to enable multiplex cold-pcr |
| US9796748B2 (en) | 2011-05-02 | 2017-10-24 | President And Fellows Of Harvard College | Spatial sequestration of dynamic nucleic acid circuits |
| EP2758458A4 (en) | 2011-07-10 | 2015-10-21 | Harvard College | COMPOSITIONS AND METHODS FOR SELF-ASSEMBLING POLYMERS WITH COMPLEMENTARY MACROSCOPIC AND MICROSCOPIC SCALE UNITS |
| CN103131756B (zh) * | 2011-11-24 | 2014-08-27 | 百奥迈科生物技术有限公司 | 一种小核酸的检测方法及其应用 |
| JP5846496B2 (ja) * | 2012-04-19 | 2016-01-20 | 国立大学法人 鹿児島大学 | LNAクランプ技術による植物内生菌のSSUrRNA遺伝子の選択的PCR増幅法 |
| US9133490B2 (en) | 2012-05-16 | 2015-09-15 | Transgenomic, Inc. | Step-up method for COLD-PCR enrichment |
| US9279146B2 (en) | 2012-12-21 | 2016-03-08 | Roche Molecular Systems, Inc. | Compounds and methods for the enrichment of mutated nucleic acid from a mixture |
| ES2730675T3 (es) | 2013-01-23 | 2019-11-12 | Univ Brandeis | Reactivos para mejorar la precisión de la PCR |
| US10913977B2 (en) | 2013-07-24 | 2021-02-09 | Dana-Farber Cancer Institute, Inc. | Methods and compositions to enable enrichment of minor DNA alleles by limiting denaturation time in PCR or simply enable enrichment of minor DNA alleles by limiting the denaturation time in PCR |
| US9624280B2 (en) | 2013-10-03 | 2017-04-18 | Janssen Biotech, Inc. | Protoxin-II variants and methods of use |
| AU2014336987A1 (en) * | 2013-10-19 | 2016-04-14 | Trovagene, Inc. | Detecting mutations in disease over time |
| US20160115556A1 (en) * | 2013-10-19 | 2016-04-28 | Trovagene, Inc. | Detecting mutations in disease over time |
| CN105283555A (zh) | 2013-10-20 | 2016-01-27 | 特罗瓦基因公司 | 核酸序列的合成和富集 |
| CA2922261A1 (en) * | 2013-10-20 | 2015-05-21 | Trovagene, Inc. | Synthesis and enrichment of nucleic acid sequences |
| US9873908B2 (en) | 2013-11-27 | 2018-01-23 | Roche Molecular Systems, Inc. | Methods for the enrichment of mutated nucleic acid from a mixture |
| CN103602748A (zh) * | 2013-11-28 | 2014-02-26 | 瑞希基因科技(北京)股份有限公司 | 一种结合荧光定量pcr技术的焦磷酸测序方法 |
| JP7016215B2 (ja) * | 2014-01-27 | 2022-02-04 | ザ ジェネラル ホスピタル コーポレイション | 配列決定のために核酸を調製する方法 |
| WO2015196154A1 (en) * | 2014-06-20 | 2015-12-23 | Richardson Katherine | System, method, data module and kit for detecting variant nucleotide sequences |
| JP6985151B2 (ja) * | 2015-04-02 | 2021-12-22 | ヤンセン バイオテツク,インコーポレーテツド | プロトキシン−ii変異体及びその使用方法 |
| EP3286334A4 (en) | 2015-04-20 | 2018-09-12 | Neogenomics Laboratories, Inc. | Method to increase sensitivity of next generation sequencing |
| CA2990846C (en) | 2015-06-24 | 2023-09-26 | Dana-Farber Cancer Institute, Inc. | Selective degradation of wild-type dna and enrichment of mutant alleles using nuclease |
| CN105063208B (zh) * | 2015-08-10 | 2018-03-06 | 北京吉因加科技有限公司 | 一种血浆中游离的目标dna低频突变富集测序方法 |
| WO2017070339A1 (en) * | 2015-10-20 | 2017-04-27 | Richardson Katherine | Microfluidic device for enrichment of nucleic acid sequence alterations |
| CN107338240B (zh) * | 2015-11-25 | 2020-11-24 | 葛猛 | 对样品中目标核酸序列进行偏向扩增的方法和试剂盒 |
| CN105821120B (zh) * | 2016-02-03 | 2019-04-30 | 广州医科大学附属肿瘤医院 | 一种基于巢式复合cold-pcr的t790m突变检测方法 |
| US11371090B2 (en) | 2016-12-12 | 2022-06-28 | Dana-Farber Cancer Institute, Inc. | Compositions and methods for molecular barcoding of DNA molecules prior to mutation enrichment and/or mutation detection |
| FI3842545T3 (fi) | 2017-04-23 | 2023-01-31 | Koostumuksia ja menetelmiä näytteiden tunnistuksen parantamiseksi indeksoiduissa nukleiinihappokirjastoissa | |
| EP3615671B1 (en) | 2017-04-23 | 2021-07-21 | Illumina Cambridge Limited | Compositions and methods for improving sample identification in indexed nucleic acid libraries |
| US12584169B2 (en) | 2017-04-23 | 2026-03-24 | Illumina, Inc. | Compositions and methods for improving sample identification in indexed nucleic acid libraries |
| EP3872187B1 (en) | 2017-04-23 | 2022-09-21 | Illumina Cambridge Limited | Compositions and methods for improving sample identification in indexed nucleic acid libraries |
| CA3059840C (en) * | 2017-04-23 | 2022-04-26 | Illumina Cambridge Limited | Compositions and methods for improving sample identification in indexed nucleic acid libraries |
| WO2019023243A1 (en) | 2017-07-24 | 2019-01-31 | Dana-Farber Cancer Institute, Inc. | METHODS AND COMPOSITIONS FOR SELECTING AND AMPLIFYING DNA TARGETS IN A SINGLE REACTION MIXTURE |
| CN107858401A (zh) * | 2017-10-31 | 2018-03-30 | 重庆邮电大学 | 一种低丰度基因突变的富集方法 |
| JP7384912B2 (ja) | 2019-02-02 | 2023-11-21 | 北京字節跳動網絡技術有限公司 | 映像符号化におけるイントラブロックコピーのためのバッファにおけるデータ記憶 |
| CN120881292A (zh) | 2019-02-02 | 2025-10-31 | 北京字节跳动网络技术有限公司 | 使用用于视频编解码中的帧内块复制的额外缓冲区样点的预测 |
| KR102688366B1 (ko) | 2019-03-01 | 2024-07-24 | 베이징 바이트댄스 네트워크 테크놀로지 컴퍼니, 리미티드 | 비디오 코딩에서 인트라 블록 복사를 위한 방향 기반 예측 |
| CN113545068B (zh) | 2019-03-01 | 2023-09-15 | 北京字节跳动网络技术有限公司 | 用于视频编解码中的帧内块复制的基于顺序的更新 |
| KR20210125506A (ko) | 2019-03-04 | 2021-10-18 | 베이징 바이트댄스 네트워크 테크놀로지 컴퍼니, 리미티드 | 비디오 코딩에서 인트라 블록 복사를 위한 버퍼 관리 |
| KR102677020B1 (ko) | 2019-07-06 | 2024-06-19 | 베이징 바이트댄스 네트워크 테크놀로지 컴퍼니, 리미티드 | 비디오 코딩에서 인트라 블록 카피를 위한 가상 예측 버퍼 |
| CN114175633B (zh) | 2019-07-10 | 2023-12-29 | 北京字节跳动网络技术有限公司 | 用于视频编解码中的帧内块复制的样点标识 |
| CN114097221B (zh) | 2019-07-11 | 2024-01-12 | 北京字节跳动网络技术有限公司 | 用于视频编解码中的帧内块复制的比特流一致性约束 |
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| BR112015026499B1 (pt) | 2013-04-17 | 2022-06-21 | Pioneer Hi-Bred International, Inc | Método para caracterizar uma sequência alvo |
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| US11371090B2 (en) | 2016-12-12 | 2022-06-28 | Dana-Farber Cancer Institute, Inc. | Compositions and methods for molecular barcoding of DNA molecules prior to mutation enrichment and/or mutation detection |
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2011
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- 2011-03-08 WO PCT/US2011/027473 patent/WO2011112534A1/en not_active Ceased
- 2011-03-08 AU AU2011224534A patent/AU2011224534B2/en not_active Ceased
- 2011-03-08 JP JP2012557157A patent/JP5795341B2/ja not_active Expired - Fee Related
- 2011-03-08 KR KR1020127026077A patent/KR101550489B1/ko not_active Expired - Fee Related
- 2011-03-08 KR KR1020157014456A patent/KR20150067398A/ko not_active Withdrawn
- 2011-03-08 EP EP11709836.8A patent/EP2545189B1/en not_active Not-in-force
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2013
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Also Published As
| Publication number | Publication date |
|---|---|
| CN102859003B (zh) | 2014-07-30 |
| AU2011224534B2 (en) | 2014-10-09 |
| CN102859003A (zh) | 2013-01-02 |
| US8623603B2 (en) | 2014-01-07 |
| WO2011112534A1 (en) | 2011-09-15 |
| US11174510B2 (en) | 2021-11-16 |
| US20110217714A1 (en) | 2011-09-08 |
| CA2792433C (en) | 2016-10-11 |
| US20140106362A1 (en) | 2014-04-17 |
| KR101550489B1 (ko) | 2015-09-07 |
| EP2545189A1 (en) | 2013-01-16 |
| JP2013521776A (ja) | 2013-06-13 |
| CA2792433A1 (en) | 2011-09-15 |
| KR20150067398A (ko) | 2015-06-17 |
| EP2545189B1 (en) | 2018-01-10 |
| JP5795341B2 (ja) | 2015-10-14 |
| KR20120139780A (ko) | 2012-12-27 |
| AU2011224534A1 (en) | 2012-09-27 |
| US9957556B2 (en) | 2018-05-01 |
| US20180282798A1 (en) | 2018-10-04 |
| DK2545189T3 (en) | 2018-04-23 |
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