DE602005017279D1 - Verfahren zur überwachung genomischer dna von organismen - Google Patents
Verfahren zur überwachung genomischer dna von organismenInfo
- Publication number
- DE602005017279D1 DE602005017279D1 DE602005017279T DE602005017279T DE602005017279D1 DE 602005017279 D1 DE602005017279 D1 DE 602005017279D1 DE 602005017279 T DE602005017279 T DE 602005017279T DE 602005017279 T DE602005017279 T DE 602005017279T DE 602005017279 D1 DE602005017279 D1 DE 602005017279D1
- Authority
- DE
- Germany
- Prior art keywords
- methods
- organisms
- genomic dna
- primers
- another embodiment
- Prior art date
- Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
- Active
Links
- 238000000034 method Methods 0.000 title abstract 5
- 238000012544 monitoring process Methods 0.000 title 1
- 230000004544 DNA amplification Effects 0.000 abstract 2
- 230000003321 amplification Effects 0.000 abstract 1
- 238000004458 analytical method Methods 0.000 abstract 1
- 238000002844 melting Methods 0.000 abstract 1
- 230000008018 melting Effects 0.000 abstract 1
- 238000003199 nucleic acid amplification method Methods 0.000 abstract 1
Classifications
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
- C12Q1/6844—Nucleic acid amplification reactions
- C12Q1/6858—Allele-specific amplification
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
- C12Q1/6844—Nucleic acid amplification reactions
- C12Q1/686—Polymerase chain reaction [PCR]
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
- C12Q1/6876—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes
- C12Q1/6888—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for detection or identification of organisms
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q2525/00—Reactions involving modified oligonucleotides, nucleic acids, or nucleotides
- C12Q2525/10—Modifications characterised by
- C12Q2525/204—Modifications characterised by specific length of the oligonucleotides
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q2527/00—Reactions demanding special reaction conditions
- C12Q2527/101—Temperature
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q2527/00—Reactions demanding special reaction conditions
- C12Q2527/113—Time
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q2535/00—Reactions characterised by the assay type for determining the identity of a nucleotide base or a sequence of oligonucleotides
- C12Q2535/139—Random amplification polymorphism detection [RAPD]
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q2600/00—Oligonucleotides characterized by their use
- C12Q2600/156—Polymorphic or mutational markers
Landscapes
- Chemical & Material Sciences (AREA)
- Life Sciences & Earth Sciences (AREA)
- Organic Chemistry (AREA)
- Proteomics, Peptides & Aminoacids (AREA)
- Zoology (AREA)
- Health & Medical Sciences (AREA)
- Engineering & Computer Science (AREA)
- Wood Science & Technology (AREA)
- Chemical Kinetics & Catalysis (AREA)
- Analytical Chemistry (AREA)
- Biophysics (AREA)
- Microbiology (AREA)
- Molecular Biology (AREA)
- Immunology (AREA)
- Biotechnology (AREA)
- Physics & Mathematics (AREA)
- Biochemistry (AREA)
- Bioinformatics & Cheminformatics (AREA)
- General Engineering & Computer Science (AREA)
- General Health & Medical Sciences (AREA)
- Genetics & Genomics (AREA)
- Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
Applications Claiming Priority (2)
| Application Number | Priority Date | Filing Date | Title |
|---|---|---|---|
| US59159604P | 2004-07-28 | 2004-07-28 | |
| PCT/US2005/026704 WO2006107317A2 (en) | 2004-07-28 | 2005-07-28 | Methods for monitoring genomic dna of organisms |
Publications (1)
| Publication Number | Publication Date |
|---|---|
| DE602005017279D1 true DE602005017279D1 (de) | 2009-12-03 |
Family
ID=37073880
Family Applications (1)
| Application Number | Title | Priority Date | Filing Date |
|---|---|---|---|
| DE602005017279T Active DE602005017279D1 (de) | 2004-07-28 | 2005-07-28 | Verfahren zur überwachung genomischer dna von organismen |
Country Status (10)
| Country | Link |
|---|---|
| US (1) | US7547514B2 (de) |
| EP (1) | EP1778877B1 (de) |
| JP (1) | JP4990771B2 (de) |
| KR (1) | KR20070052770A (de) |
| CN (1) | CN101027413B (de) |
| AT (1) | ATE446386T1 (de) |
| AU (1) | AU2005330267A1 (de) |
| CA (1) | CA2575545A1 (de) |
| DE (1) | DE602005017279D1 (de) |
| WO (1) | WO2006107317A2 (de) |
Families Citing this family (2)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| US8119352B2 (en) * | 2006-06-20 | 2012-02-21 | Cepheld | Multi-stage amplification reactions by control of sequence replication times |
| GB201812192D0 (en) | 2018-07-26 | 2018-09-12 | Ttp Plc | Variable temperature reactor, heater and control circuit for the same |
Family Cites Families (56)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| ZA929319B (en) * | 1991-12-11 | 1993-05-24 | Igen Inc | Method for exponential amplification of nucleic acid by a single unpaired primer. |
| US5759821A (en) | 1993-04-16 | 1998-06-02 | F B Investments Pty Ltd | Method of random amplification of polymorphic DNA |
| US5942443A (en) | 1996-06-28 | 1999-08-24 | Caliper Technologies Corporation | High throughput screening assay systems in microscale fluidic devices |
| GB9608644D0 (en) | 1996-04-26 | 1996-07-03 | Scient Genarics Ltd | Nucleic acid manipulation |
| WO1998000705A1 (en) | 1996-06-28 | 1998-01-08 | Caliper Technologies Corporation | Electropipettor and compensation means for electrophoretic bias |
| US5779868A (en) | 1996-06-28 | 1998-07-14 | Caliper Technologies Corporation | Electropipettor and compensation means for electrophoretic bias |
| JP3788519B2 (ja) | 1996-06-28 | 2006-06-21 | カリパー・ライフ・サイエンシズ・インコーポレーテッド | 微小スケール流体装置の高処理能力スクリーニングアッセイシステム |
| US5800690A (en) | 1996-07-03 | 1998-09-01 | Caliper Technologies Corporation | Variable control of electroosmotic and/or electrophoretic forces within a fluid-containing structure via electrical forces |
| US6447727B1 (en) | 1996-11-19 | 2002-09-10 | Caliper Technologies Corp. | Microfluidic systems |
| US6465257B1 (en) | 1996-11-19 | 2002-10-15 | Caliper Technologies Corp. | Microfluidic systems |
| US6391622B1 (en) | 1997-04-04 | 2002-05-21 | Caliper Technologies Corp. | Closed-loop biochemical analyzers |
| US5882465A (en) | 1997-06-18 | 1999-03-16 | Caliper Technologies Corp. | Method of manufacturing microfluidic devices |
| US5876675A (en) | 1997-08-05 | 1999-03-02 | Caliper Technologies Corp. | Microfluidic devices and systems |
| US5989402A (en) | 1997-08-29 | 1999-11-23 | Caliper Technologies Corp. | Controller/detector interfaces for microfluidic systems |
| AUPO882497A0 (en) * | 1997-08-29 | 1997-09-18 | Grains Research & Development Corporation | A method of genotyping |
| US5965410A (en) | 1997-09-02 | 1999-10-12 | Caliper Technologies Corp. | Electrical current for controlling fluid parameters in microchannels |
| US6012902A (en) | 1997-09-25 | 2000-01-11 | Caliper Technologies Corp. | Micropump |
| US6914137B2 (en) | 1997-12-06 | 2005-07-05 | Dna Research Innovations Limited | Isolation of nucleic acids |
| KR20010032806A (ko) | 1997-12-06 | 2001-04-25 | 매튜 존 베이커 | 핵산 분리방법 |
| US6534262B1 (en) | 1998-05-14 | 2003-03-18 | Whitehead Institute For Biomedical Research | Solid phase technique for selectively isolating nucleic acids |
| US6306590B1 (en) | 1998-06-08 | 2001-10-23 | Caliper Technologies Corp. | Microfluidic matrix localization apparatus and methods |
| US6132685A (en) | 1998-08-10 | 2000-10-17 | Caliper Technologies Corporation | High throughput microfluidic systems and methods |
| US6416642B1 (en) | 1999-01-21 | 2002-07-09 | Caliper Technologies Corp. | Method and apparatus for continuous liquid flow in microscale channels using pressure injection, wicking, and electrokinetic injection |
| US6171850B1 (en) | 1999-03-08 | 2001-01-09 | Caliper Technologies Corp. | Integrated devices and systems for performing temperature controlled reactions and analyses |
| US6500323B1 (en) | 1999-03-26 | 2002-12-31 | Caliper Technologies Corp. | Methods and software for designing microfluidic devices |
| GB9915398D0 (en) | 1999-07-02 | 1999-09-01 | Baker Matthew J | Magnetic particles |
| WO2001002850A1 (en) | 1999-07-06 | 2001-01-11 | Caliper Technologies Corp. | Microfluidic systems and methods for determining modulator kinetics |
| US6613581B1 (en) | 1999-08-26 | 2003-09-02 | Caliper Technologies Corp. | Microfluidic analytic detection assays, devices, and integrated systems |
| US6752966B1 (en) | 1999-09-10 | 2004-06-22 | Caliper Life Sciences, Inc. | Microfabrication methods and devices |
| US6556923B2 (en) | 2000-01-26 | 2003-04-29 | Caliper Technologies Corp. | Software for high throughput microfluidic systems |
| WO2001077384A2 (de) * | 2000-04-07 | 2001-10-18 | Epigenomics Ag | DETEKTION VON SNPs UND CYTOSIN-METHYLIERUNGEN |
| JP4331379B2 (ja) | 2000-04-25 | 2009-09-16 | タイテック株式会社 | 遺伝子型による生物の同定方法 |
| US7501284B2 (en) | 2000-07-31 | 2009-03-10 | Applera Corporation | Apparatus and method for specific release of captured extension products |
| ATE448875T1 (de) | 2000-09-14 | 2009-12-15 | Caliper Life Sciences Inc | Mikrofluidische vorrichtungen und methoden um temperatur-vermittelte reaktionen durchzuführen |
| WO2002046398A2 (en) | 2000-11-06 | 2002-06-13 | The University Of Houston System | Nucleic acid separation using immobilized metal affinity chromatography |
| JP2002291500A (ja) | 2001-03-29 | 2002-10-08 | Adgene Co Ltd | 核酸溶解曲線及び核酸解離曲線を用いた核酸変異検出法 |
| US20020197630A1 (en) | 2001-04-12 | 2002-12-26 | Knapp Michael R. | Systems and methods for high throughput genetic analysis |
| US6852524B2 (en) | 2001-04-27 | 2005-02-08 | Canon Kabushiki Kaisha | Probe carrier, probe fixing carrier and method of manufacturing the same |
| JP2002325581A (ja) | 2001-04-27 | 2002-11-12 | Adgene Co Ltd | 核酸溶解曲線及び核酸解離曲線を用いた未知あるいは既知核酸変異検出法及び表示法 |
| CA2453207A1 (en) | 2001-07-06 | 2003-01-16 | 454 Corporation | Method for isolation of independent, parallel chemical micro-reactions using a porous filter |
| JP2003083965A (ja) | 2001-09-10 | 2003-03-19 | Adgene Co Ltd | 蛋白・核酸解析用チップ |
| JP2003093075A (ja) | 2001-09-26 | 2003-04-02 | Adgene Co Ltd | 電気抵抗を利用した核酸変異検出法 |
| JP2003180374A (ja) | 2001-10-12 | 2003-07-02 | Adgene Co Ltd | 核酸溶解曲線を応用した核酸変異検出法 |
| JP2003180351A (ja) | 2001-12-13 | 2003-07-02 | Adgene Co Ltd | 核酸高次構造誘導を用いた核酸変異検出法 |
| JP2003274959A (ja) | 2002-03-22 | 2003-09-30 | Adgene Co Ltd | ポリメラーゼ連鎖反応を応用した非特異核酸増幅法 |
| JP2003334082A (ja) | 2002-05-17 | 2003-11-25 | Adgene Co Ltd | 波形生成プライマー、該プライマーを使用した核酸増幅方法及び核酸同定方法 |
| JP2004041191A (ja) | 2002-05-21 | 2004-02-12 | Adgene Co Ltd | 核酸同定方法 |
| US20060234228A1 (en) | 2002-05-21 | 2006-10-19 | Joji Oshima | Method of identifying nucleic acid |
| JP2004057202A (ja) | 2002-06-05 | 2004-02-26 | Ryoshoku Kenkyukai | Ｂａｃｉｌｌｕｓｃｅｒｅｕｓの迅速検出法 |
| JP2004185583A (ja) | 2002-12-05 | 2004-07-02 | Adgene Co Ltd | 核酸同定用波形解析データの提供システム |
| JP2004236651A (ja) | 2003-02-07 | 2004-08-26 | Adgene Co Ltd | 核酸解離曲線の波形を解析ソフトウエアで解析して核酸を同定する方法 |
| US20040197780A1 (en) | 2003-04-02 | 2004-10-07 | Agencourt Bioscience Corporation | Method for isolating nucleic acids |
| WO2004104196A1 (ja) | 2003-05-20 | 2004-12-02 | G & G Science Co., Ltd. | 緩衝剤組成物 |
| JP2004361310A (ja) | 2003-06-06 | 2004-12-24 | Yokogawa Electric Corp | 波形測定装置 |
| US20050064465A1 (en) | 2003-07-02 | 2005-03-24 | Caliper Life Sciences, Inc. | Continuous and non-continuous flow bioreactor |
| JPWO2005005664A1 (ja) | 2003-07-15 | 2006-08-24 | Ｇ＆Ｇサイエンス株式会社 | 核酸の検出方法および同定方法 |
-
2005
- 2005-07-28 JP JP2007523792A patent/JP4990771B2/ja not_active Expired - Fee Related
- 2005-07-28 EP EP05857703A patent/EP1778877B1/de not_active Not-in-force
- 2005-07-28 AT AT05857703T patent/ATE446386T1/de not_active IP Right Cessation
- 2005-07-28 AU AU2005330267A patent/AU2005330267A1/en not_active Abandoned
- 2005-07-28 DE DE602005017279T patent/DE602005017279D1/de active Active
- 2005-07-28 KR KR1020077004728A patent/KR20070052770A/ko not_active Application Discontinuation
- 2005-07-28 US US11/190,942 patent/US7547514B2/en not_active Expired - Fee Related
- 2005-07-28 WO PCT/US2005/026704 patent/WO2006107317A2/en active Application Filing
- 2005-07-28 CN CN200580032040.3A patent/CN101027413B/zh not_active Expired - Fee Related
- 2005-07-28 CA CA002575545A patent/CA2575545A1/en not_active Abandoned
Also Published As
| Publication number | Publication date |
|---|---|
| EP1778877A2 (de) | 2007-05-02 |
| JP2008507979A (ja) | 2008-03-21 |
| WO2006107317A3 (en) | 2007-03-22 |
| WO2006107317A2 (en) | 2006-10-12 |
| CN101027413B (zh) | 2016-08-17 |
| ATE446386T1 (de) | 2009-11-15 |
| CN101027413A (zh) | 2007-08-29 |
| EP1778877B1 (de) | 2009-10-21 |
| JP4990771B2 (ja) | 2012-08-01 |
| AU2005330267A1 (en) | 2006-10-12 |
| KR20070052770A (ko) | 2007-05-22 |
| CA2575545A1 (en) | 2006-10-12 |
| US20060115830A1 (en) | 2006-06-01 |
| US7547514B2 (en) | 2009-06-16 |
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Legal Events
| Date | Code | Title | Description |
|---|---|---|---|
| 8364 | No opposition during term of opposition |