CA2340150C - Methods and apparatus for mass spectrometry - Google Patents
Methods and apparatus for mass spectrometry Download PDFInfo
- Publication number
- CA2340150C CA2340150C CA002340150A CA2340150A CA2340150C CA 2340150 C CA2340150 C CA 2340150C CA 002340150 A CA002340150 A CA 002340150A CA 2340150 A CA2340150 A CA 2340150A CA 2340150 C CA2340150 C CA 2340150C
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- Prior art keywords
- ions
- mass
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- Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
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- 238000000034 method Methods 0.000 title claims abstract description 136
- 238000004949 mass spectrometry Methods 0.000 title claims description 96
- 150000002500 ions Chemical class 0.000 claims abstract description 678
- 238000013467 fragmentation Methods 0.000 claims abstract description 140
- 238000006062 fragmentation reaction Methods 0.000 claims abstract description 140
- 238000001819 mass spectrum Methods 0.000 claims abstract description 47
- 230000007935 neutral effect Effects 0.000 claims abstract description 41
- 239000002245 particle Substances 0.000 claims abstract description 14
- 238000011144 upstream manufacturing Methods 0.000 claims abstract description 12
- 230000003287 optical effect Effects 0.000 claims description 25
- 108090000765 processed proteins & peptides Proteins 0.000 claims description 24
- 239000003480 eluent Substances 0.000 claims description 22
- 238000001914 filtration Methods 0.000 claims description 20
- 230000005540 biological transmission Effects 0.000 claims description 18
- 239000000203 mixture Substances 0.000 claims description 17
- 102000004196 processed proteins & peptides Human genes 0.000 claims description 15
- 238000005040 ion trap Methods 0.000 claims description 10
- 238000004458 analytical method Methods 0.000 claims description 9
- 238000004252 FT/ICR mass spectrometry Methods 0.000 claims description 8
- 238000003795 desorption Methods 0.000 claims description 7
- 238000004811 liquid chromatography Methods 0.000 claims description 7
- 125000000524 functional group Chemical group 0.000 claims description 6
- 239000011159 matrix material Substances 0.000 claims description 6
- 238000000065 atmospheric pressure chemical ionisation Methods 0.000 claims description 5
- 238000000451 chemical ionisation Methods 0.000 claims description 5
- 230000005684 electric field Effects 0.000 claims description 5
- 238000004817 gas chromatography Methods 0.000 claims description 5
- 125000002467 phosphate group Chemical group [H]OP(=O)(O[H])O[*] 0.000 claims description 5
- 230000001419 dependent effect Effects 0.000 claims 3
- 238000001228 spectrum Methods 0.000 abstract description 95
- 239000002243 precursor Substances 0.000 description 31
- 238000004885 tandem mass spectrometry Methods 0.000 description 25
- 239000000047 product Substances 0.000 description 18
- 238000002474 experimental method Methods 0.000 description 14
- 239000012634 fragment Substances 0.000 description 12
- 239000007789 gas Substances 0.000 description 12
- XKRFYHLGVUSROY-UHFFFAOYSA-N Argon Chemical compound [Ar] XKRFYHLGVUSROY-UHFFFAOYSA-N 0.000 description 8
- 238000007796 conventional method Methods 0.000 description 8
- 235000018102 proteins Nutrition 0.000 description 7
- 102000004169 proteins and genes Human genes 0.000 description 7
- 108090000623 proteins and genes Proteins 0.000 description 7
- 102000007698 Alcohol dehydrogenase Human genes 0.000 description 6
- 108010021809 Alcohol dehydrogenase Proteins 0.000 description 6
- 238000004128 high performance liquid chromatography Methods 0.000 description 6
- 230000008569 process Effects 0.000 description 6
- 238000004587 chromatography analysis Methods 0.000 description 5
- 239000007788 liquid Substances 0.000 description 5
- 238000000926 separation method Methods 0.000 description 5
- IJGRMHOSHXDMSA-UHFFFAOYSA-N Atomic nitrogen Chemical compound N#N IJGRMHOSHXDMSA-UHFFFAOYSA-N 0.000 description 4
- 102000011632 Caseins Human genes 0.000 description 4
- 108010076119 Caseins Proteins 0.000 description 4
- 238000013459 approach Methods 0.000 description 4
- 229910052786 argon Inorganic materials 0.000 description 4
- 150000001793 charged compounds Chemical class 0.000 description 4
- VNWKTOKETHGBQD-UHFFFAOYSA-N methane Chemical compound C VNWKTOKETHGBQD-UHFFFAOYSA-N 0.000 description 4
- DCXYFEDJOCDNAF-UHFFFAOYSA-N Asparagine Natural products OC(=O)C(N)CC(N)=O DCXYFEDJOCDNAF-UHFFFAOYSA-N 0.000 description 3
- DCXYFEDJOCDNAF-REOHCLBHSA-N L-asparagine Chemical compound OC(=O)[C@@H](N)CC(N)=O DCXYFEDJOCDNAF-REOHCLBHSA-N 0.000 description 3
- 230000001133 acceleration Effects 0.000 description 3
- 229960001230 asparagine Drugs 0.000 description 3
- 235000009582 asparagine Nutrition 0.000 description 3
- 239000005018 casein Substances 0.000 description 3
- 238000012790 confirmation Methods 0.000 description 3
- 238000010828 elution Methods 0.000 description 3
- 230000035945 sensitivity Effects 0.000 description 3
- 239000007921 spray Substances 0.000 description 3
- 239000003570 air Substances 0.000 description 2
- 235000001014 amino acid Nutrition 0.000 description 2
- 229940024606 amino acid Drugs 0.000 description 2
- 150000001413 amino acids Chemical class 0.000 description 2
- 150000001875 compounds Chemical class 0.000 description 2
- 238000000354 decomposition reaction Methods 0.000 description 2
- -1 for example Chemical class 0.000 description 2
- 239000001307 helium Substances 0.000 description 2
- 229910052734 helium Inorganic materials 0.000 description 2
- SWQJXJOGLNCZEY-UHFFFAOYSA-N helium atom Chemical compound [He] SWQJXJOGLNCZEY-UHFFFAOYSA-N 0.000 description 2
- 230000006872 improvement Effects 0.000 description 2
- 230000003993 interaction Effects 0.000 description 2
- 238000012544 monitoring process Methods 0.000 description 2
- 229910052757 nitrogen Inorganic materials 0.000 description 2
- 239000000126 substance Substances 0.000 description 2
- 235000021249 α-casein Nutrition 0.000 description 2
- 235000021247 β-casein Nutrition 0.000 description 2
- BDAGIHXWWSANSR-UHFFFAOYSA-N Formic acid Chemical compound OC=O BDAGIHXWWSANSR-UHFFFAOYSA-N 0.000 description 1
- BZQFBWGGLXLEPQ-UHFFFAOYSA-N O-phosphoryl-L-serine Natural products OC(=O)C(N)COP(O)(O)=O BZQFBWGGLXLEPQ-UHFFFAOYSA-N 0.000 description 1
- 229910019142 PO4 Inorganic materials 0.000 description 1
- 108010001441 Phosphopeptides Proteins 0.000 description 1
- 238000002539 daughter ion scan Methods 0.000 description 1
- 230000003247 decreasing effect Effects 0.000 description 1
- 230000002950 deficient Effects 0.000 description 1
- 238000011033 desalting Methods 0.000 description 1
- 229950006137 dexfosfoserine Drugs 0.000 description 1
- 239000012502 diagnostic product Substances 0.000 description 1
- 239000002359 drug metabolite Substances 0.000 description 1
- 238000000132 electrospray ionisation Methods 0.000 description 1
- 230000008030 elimination Effects 0.000 description 1
- 238000003379 elimination reaction Methods 0.000 description 1
- 235000019253 formic acid Nutrition 0.000 description 1
- 239000012535 impurity Substances 0.000 description 1
- 238000011068 loading method Methods 0.000 description 1
- 108091005601 modified peptides Proteins 0.000 description 1
- NBIIXXVUZAFLBC-UHFFFAOYSA-K phosphate Chemical compound [O-]P([O-])([O-])=O NBIIXXVUZAFLBC-UHFFFAOYSA-K 0.000 description 1
- 239000010452 phosphate Substances 0.000 description 1
- 230000026731 phosphorylation Effects 0.000 description 1
- 238000006366 phosphorylation reaction Methods 0.000 description 1
- BZQFBWGGLXLEPQ-REOHCLBHSA-N phosphoserine Chemical compound OC(=O)[C@@H](N)COP(O)(O)=O BZQFBWGGLXLEPQ-REOHCLBHSA-N 0.000 description 1
- USRGIUJOYOXOQJ-GBXIJSLDSA-N phosphothreonine Chemical compound OP(=O)(O)O[C@H](C)[C@H](N)C(O)=O USRGIUJOYOXOQJ-GBXIJSLDSA-N 0.000 description 1
- DCWXELXMIBXGTH-UHFFFAOYSA-N phosphotyrosine Chemical compound OC(=O)C(N)CC1=CC=C(OP(O)(O)=O)C=C1 DCWXELXMIBXGTH-UHFFFAOYSA-N 0.000 description 1
- 230000004481 post-translational protein modification Effects 0.000 description 1
- 230000003595 spectral effect Effects 0.000 description 1
- 238000010183 spectrum analysis Methods 0.000 description 1
- 238000005507 spraying Methods 0.000 description 1
- 229910001220 stainless steel Inorganic materials 0.000 description 1
- 239000010935 stainless steel Substances 0.000 description 1
- 239000003643 water by type Substances 0.000 description 1
Classifications
-
- H—ELECTRICITY
- H01—ELECTRIC ELEMENTS
- H01J—ELECTRIC DISCHARGE TUBES OR DISCHARGE LAMPS
- H01J49/00—Particle spectrometers or separator tubes
- H01J49/004—Combinations of spectrometers, tandem spectrometers, e.g. MS/MS, MSn
- H01J49/0045—Combinations of spectrometers, tandem spectrometers, e.g. MS/MS, MSn characterised by the fragmentation or other specific reaction
Landscapes
- Chemical & Material Sciences (AREA)
- Chemical Kinetics & Catalysis (AREA)
- Analytical Chemistry (AREA)
- Other Investigation Or Analysis Of Materials By Electrical Means (AREA)
- Electron Tubes For Measurement (AREA)
Applications Claiming Priority (6)
| Application Number | Priority Date | Filing Date | Title |
|---|---|---|---|
| GB0014062A GB0014062D0 (en) | 2000-06-09 | 2000-06-09 | Methods and apparatus for tandem mass spectrometry |
| GB0014062.4 | 2000-06-09 | ||
| GB0101048A GB0101048D0 (en) | 2001-01-15 | 2001-01-15 | Methods and apparatus for tandem mass spectrometry |
| GB0101048.7 | 2001-01-15 | ||
| GB0105227A GB2364168B (en) | 2000-06-09 | 2001-03-02 | Methods and apparatus for mass spectrometry |
| GB0105227.3 | 2001-03-02 |
Publications (2)
| Publication Number | Publication Date |
|---|---|
| CA2340150A1 CA2340150A1 (en) | 2001-12-09 |
| CA2340150C true CA2340150C (en) | 2005-11-22 |
Family
ID=27255755
Family Applications (2)
| Application Number | Title | Priority Date | Filing Date |
|---|---|---|---|
| CA002340150A Expired - Fee Related CA2340150C (en) | 2000-06-09 | 2001-03-09 | Methods and apparatus for mass spectrometry |
| CA002350041A Expired - Lifetime CA2350041C (en) | 2000-06-09 | 2001-06-08 | Methods and apparatus for mass spectrometry |
Family Applications After (1)
| Application Number | Title | Priority Date | Filing Date |
|---|---|---|---|
| CA002350041A Expired - Lifetime CA2350041C (en) | 2000-06-09 | 2001-06-08 | Methods and apparatus for mass spectrometry |
Country Status (7)
| Country | Link |
|---|---|
| US (1) | US6717130B2 (enExample) |
| EP (4) | EP1622188B1 (enExample) |
| JP (2) | JP4588925B2 (enExample) |
| AT (2) | ATE329369T1 (enExample) |
| CA (2) | CA2340150C (enExample) |
| DE (2) | DE60120337T2 (enExample) |
| GB (1) | GB2363249B (enExample) |
Families Citing this family (110)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| GB2364168B (en) * | 2000-06-09 | 2002-06-26 | Micromass Ltd | Methods and apparatus for mass spectrometry |
| US20020115056A1 (en) * | 2000-12-26 | 2002-08-22 | Goodlett David R. | Rapid and quantitative proteome analysis and related methods |
| US7038197B2 (en) * | 2001-04-03 | 2006-05-02 | Micromass Limited | Mass spectrometer and method of mass spectrometry |
| WO2003073464A1 (de) * | 2002-02-28 | 2003-09-04 | Metanomics Gmbh & Co. Kgaa | Massenspektrometrisches verfahren zur analyse von substanzgemischen |
| JP3743717B2 (ja) * | 2002-06-25 | 2006-02-08 | 株式会社日立製作所 | 質量分析データの解析方法および質量分析データの解析装置および質量分析データの解析プログラムならびにソリューション提供システム |
| GB0305796D0 (en) | 2002-07-24 | 2003-04-16 | Micromass Ltd | Method of mass spectrometry and a mass spectrometer |
| US7041968B2 (en) * | 2003-03-20 | 2006-05-09 | Science & Technology Corporation @ Unm | Distance of flight spectrometer for MS and simultaneous scanless MS/MS |
| US7202473B2 (en) | 2003-04-10 | 2007-04-10 | Micromass Uk Limited | Mass spectrometer |
| CA2523107C (en) * | 2003-04-25 | 2009-06-23 | Griffin Analytical Technologies, Inc. | Instrumentation, articles of manufacture, and analysis methods |
| JP4690641B2 (ja) * | 2003-07-28 | 2011-06-01 | 株式会社日立ハイテクノロジーズ | 質量分析計 |
| GB0322356D0 (en) * | 2003-09-24 | 2003-10-22 | Micromass Ltd | Mass spectrometer |
| US7022980B2 (en) * | 2004-02-02 | 2006-04-04 | Agilent Technologies, Inc. | Spectral axis transform |
| DE102005004800A1 (de) * | 2004-02-06 | 2005-11-10 | Micromass Uk Ltd. | Massenspektrometer |
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| JP5068541B2 (ja) * | 2004-02-13 | 2012-11-07 | ウオーターズ・テクノロジーズ・コーポレイシヨン | 液体クロマトグラフィ／質量分析データ中のピークを同定し、スペクトルおよびクロマトグラムを形成するための装置および方法 |
| US8003934B2 (en) * | 2004-02-23 | 2011-08-23 | Andreas Hieke | Methods and apparatus for ion sources, ion control and ion measurement for macromolecules |
| US7994474B2 (en) * | 2004-02-23 | 2011-08-09 | Andreas Hieke | Laser desorption ionization ion source with charge injection |
| EP1766394B1 (en) * | 2004-05-20 | 2020-09-09 | Waters Technologies Corporation | System and method for grouping precursor and fragment ions using selected ion chromatograms |
| GB2430794B (en) * | 2004-05-20 | 2009-10-21 | Waters Investments Ltd | Method and apparatus for identifying proteins in mixtures |
| DE112005001385T5 (de) | 2004-06-15 | 2007-05-10 | Griffin analytical Technologies Inc., West Lafayette | Analyseinstrumente, -baugruppen und -verfahren |
| GB0416288D0 (en) * | 2004-07-21 | 2004-08-25 | Micromass Ltd | Mass spectrometer |
| DE102004045534B4 (de) * | 2004-09-20 | 2010-07-22 | Bruker Daltonik Gmbh | Tochterionenspektren mit Flugzeitmassenspektrometern |
| US7197402B2 (en) * | 2004-10-14 | 2007-03-27 | Highchem, Ltd. | Determination of molecular structures using tandem mass spectrometry |
| GB0508239D0 (en) * | 2005-04-23 | 2005-06-01 | Smiths Group Plc | Detection apparatus |
| US8680461B2 (en) | 2005-04-25 | 2014-03-25 | Griffin Analytical Technologies, L.L.C. | Analytical instrumentation, apparatuses, and methods |
| DE102005025497B4 (de) * | 2005-06-03 | 2007-09-27 | Bruker Daltonik Gmbh | Leichte Bruckstückionen mit Ionenfallen messen |
| JP4932833B2 (ja) | 2005-06-03 | 2012-05-16 | ウオーターズ・テクノロジーズ・コーポレイシヨン | 分画を用いる化学分析の方法および装置 |
| WO2006133191A2 (en) | 2005-06-03 | 2006-12-14 | Waters Investments Limited | Methods and apparatus for performing retention-time matching |
| US7417223B2 (en) * | 2005-10-28 | 2008-08-26 | Mds Inc. | Method, system and computer software product for specific identification of reaction pairs associated by specific neutral differences |
| GB0523811D0 (en) * | 2005-11-23 | 2006-01-04 | Micromass Ltd | Mass stectrometer |
| GB2432712B (en) * | 2005-11-23 | 2007-12-27 | Micromass Ltd | Mass spectrometer |
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| GB0524972D0 (en) | 2005-12-07 | 2006-01-18 | Micromass Ltd | Mass spectrometer |
| EP1969615A4 (en) * | 2006-01-05 | 2011-08-03 | Mds Analytical Tech Bu Mds Inc | MASS DEFECT-RELATED INFORMATION-RELATED DETECTION |
| WO2007092873A2 (en) * | 2006-02-07 | 2007-08-16 | Applera Corporation | Chemical noise reduction for mass spectrometry |
| JP4782579B2 (ja) * | 2006-02-15 | 2011-09-28 | 株式会社日立ハイテクノロジーズ | タンデム型質量分析システム及び方法 |
| CA2639903C (en) | 2006-04-13 | 2012-01-03 | Thermo Fisher Scientific (Bremen) Gmbh | Ion energy spread reduction for mass spectrometer |
| GB0607542D0 (en) | 2006-04-13 | 2006-05-24 | Thermo Finnigan Llc | Mass spectrometer |
| GB0609253D0 (en) * | 2006-05-10 | 2006-06-21 | Micromass Ltd | Mass spectrometer |
| US7479629B2 (en) * | 2006-08-24 | 2009-01-20 | Agilent Technologies, Inc. | Multichannel rapid sampling of chromatographic peaks by tandem mass spectrometer |
| US7992424B1 (en) | 2006-09-14 | 2011-08-09 | Griffin Analytical Technologies, L.L.C. | Analytical instrumentation and sample analysis methods |
| US8134121B2 (en) * | 2006-10-31 | 2012-03-13 | Shimadzu Corporation | Chromatographic mass spectrometer |
| US7511267B2 (en) * | 2006-11-10 | 2009-03-31 | Thermo Finnigan Llc | Data-dependent accurate mass neutral loss analysis |
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| GB0919870D0 (en) | 2009-11-13 | 2009-12-30 | Micromass Ltd | A method to detect and quantitatively profile organic species using a mass spectrometer |
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| CN109828068B (zh) | 2017-11-23 | 2021-12-28 | 株式会社岛津制作所 | 质谱数据采集及分析方法 |
| CN109830426B (zh) | 2017-11-23 | 2021-04-02 | 株式会社岛津制作所 | 质谱数据采集方法 |
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2001
- 2001-03-09 CA CA002340150A patent/CA2340150C/en not_active Expired - Fee Related
- 2001-03-14 EP EP05022407A patent/EP1622188B1/en not_active Expired - Lifetime
- 2001-03-14 DE DE60120337T patent/DE60120337T2/de not_active Expired - Lifetime
- 2001-03-14 AT AT01302377T patent/ATE329369T1/de not_active IP Right Cessation
- 2001-03-14 EP EP01302377A patent/EP1220290B1/en not_active Expired - Lifetime
- 2001-06-08 US US09/876,122 patent/US6717130B2/en not_active Expired - Lifetime
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- 2001-06-11 JP JP2001175747A patent/JP4588925B2/ja not_active Expired - Lifetime
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- 2001-06-11 EP EP05025116A patent/EP1638133B3/en not_active Expired - Lifetime
- 2001-06-11 JP JP2001175716A patent/JP2002100318A/ja active Pending
Also Published As
| Publication number | Publication date |
|---|---|
| DE60120337D1 (de) | 2006-07-20 |
| EP1638133B3 (en) | 2012-06-13 |
| DE60126055T2 (de) | 2007-08-23 |
| ATE352097T1 (de) | 2007-02-15 |
| EP1220290B1 (en) | 2006-06-07 |
| EP1225618A2 (en) | 2002-07-24 |
| EP1622188A3 (en) | 2007-12-19 |
| ATE329369T1 (de) | 2006-06-15 |
| DE60120337T2 (de) | 2007-05-24 |
| EP1225618B3 (en) | 2015-02-18 |
| EP1220290A2 (en) | 2002-07-03 |
| CA2350041A1 (en) | 2001-12-09 |
| US6717130B2 (en) | 2004-04-06 |
| GB0114166D0 (en) | 2001-08-01 |
| DE60126055T3 (de) | 2015-05-13 |
| EP1622188A2 (en) | 2006-02-01 |
| EP1220290A3 (en) | 2004-03-31 |
| DE60126055D1 (de) | 2007-03-08 |
| JP4588925B2 (ja) | 2010-12-01 |
| EP1638133A2 (en) | 2006-03-22 |
| EP1622188B1 (en) | 2012-06-13 |
| GB2363249A (en) | 2001-12-12 |
| CA2340150A1 (en) | 2001-12-09 |
| US20020063206A1 (en) | 2002-05-30 |
| EP1225618A3 (en) | 2004-03-31 |
| JP2002100318A (ja) | 2002-04-05 |
| JP2002110081A (ja) | 2002-04-12 |
| EP1225618B1 (en) | 2007-01-17 |
| GB2363249B (en) | 2002-08-28 |
| CA2350041C (en) | 2008-01-08 |
| EP1638133B1 (en) | 2009-10-07 |
| EP1638133A3 (en) | 2007-12-05 |
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