WO2017076359A1 - 一种利用囊胚培养液检测胚胎染色体异常的方法 - Google Patents
一种利用囊胚培养液检测胚胎染色体异常的方法 Download PDFInfo
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Definitions
- the invention relates to the fields of biomedicine and molecular cell biology, and particularly relates to a method for detecting and analyzing the state of an embryo chromosome by using a blastocyst culture solution.
- IVF technology is a powerful technical means to fight infertility.
- the technical process is to first obtain multiple eggs from the mother (usually 8-15), and then in vitro fertilize the eggs with the father's sperm.
- the embryo When grown in vitro for 5 days, the embryo is a saccular structure consisting of about 80-100 cells, ie, blastocysts. After placing 2-3 blastocysts into the mother's uterus, ideally, the blastocyst placed in the uterus can be One to three have developed successfully during normal pregnancy until birth.
- the success rate of blastocyst implantation into the uterus to the birth of the fetus is usually not high, usually only about 40%.
- the quality of the fertilized egg is one of the important reasons for the failure of blastocyst development.
- the chromosome of the fertilized egg comes from the mother's egg and the parent's sperm, and any one of the chromosome abnormalities causes the chromosomal abnormality of the fertilized egg.
- all or part of any chromosome may be more or less diploid, called aneuploidy abnormality, and aneuploidy abnormality is the most common chromosomal abnormal form that causes embryonic development failure. .
- PGS Preimplantation Genetic Screen
- FISH immunofluorescence detection
- chip detection chip detection
- second-generation sequencing detection The biological samples required for the above various tests are one to several cells collected from the in vitro cultured embryos, and the detection of the small number of cells reflects whether the chromosomes of the entire embryo are normal.
- embryonic trophoblast cells can be extracted when the fertilized egg cultured in vitro for 5 days develops to the blastocyst stage (trophoblast).
- the general operation is to use a capillary glass tube to absorb one to several trophoblast cells to lyse the cells, release the trace DNA, and then use the nucleic acid chip or the second generation sequencing method to detect the trace DNA.
- the chromosomal state of the cells see invention patent application CN104711362A, published on June 17, 2015). In theory, the chromosomal state in several cells taken up is consistent with other cells in the embryo. By detecting these cells, it is possible to know whether the chromosomal state of the embryo is normal.
- the free DNA is obtained in the blastocyst fluid, that is, using a micro-puncture technique under a micromanipulator, using a sterile needle suction.
- Blastocyst fluid free DNA see invention patent application CN104450923A, published on March 25, 2015; and journal literature Luca Gianaroli, M. Chris Magli, Alessandra Pomante, et al. Blastocentesis: a source of DNA for preimplantation genetic testing .Results from a pilot study.Fertility and Sterility, 2014, 102(6): 1692-1698.).
- the blastocyst fluid is a liquid in the blastocyst cavity. To obtain a blastocyst fluid, it is still necessary to punch or pierce the blastocyst, and its interventional effect will still cause inevitable damage to the embryo.
- a non-invasive technical means that does not damage the embryo itself, but can also check the chromosomal condition of the embryo is a realistic need to eliminate the hidden dangers of health and ensure the safety of embryo detection.
- the object of the present invention is to provide a method for detecting chromosomal abnormalities of an embryo by using a blastocyst culture solution, which does not cause any damage to the embryo, and is simple in operation and safety. And higher reliability.
- the present invention provides a method for detecting an chromosomal abnormality of an embryo using a blastocyst culture solution, which comprises the following steps:
- blastocyst culture solution The fertilized egg is obtained by single sperm injection method, and cultured until the blastomere stage on the 3rd day, and then transferred to the newly prepared blastocyst culture droplet for blastocyst culture, at this time It is necessary to change the liquid on the third day, in order to remove the contamination of the detached granulosa cells and unfertilized sperm;
- the embryos forming the blastocysts are aspirated, transferred to a new blastocyst culture solution or enter a vitrification cryopreservation process, and the remaining protoplast culture medium is about 1 microliter to 500 microliters, preferably 10 microliters to 200 microliters, Samples to be collected for preimplantation genetic screening (PGS);
- the whole genome-amplified DNA product is analyzed to identify whether the chromosomal state of the embryo is normal: the second generation sequencing, nucleic acid chip or immunofluorescence detection is used for the analysis.
- the embryos forming the blastocyst are aspirated, transferred to a new blastocyst culture solution or enter a vitrification cryopreservation process, and the remaining primary blastocyst culture solution is about 1 microliter to 500 microliters.
- L preferably 10 microliters to 200 microliters, is the sample that needs to be collected for preimplantation genetic screening (PGS).
- the component of the lysate in the step (2) is Tris-Cl 25-45 mM having a pH of 7.0 to 8.0, EDTA 0.5-3 mM, KCl 10-25 mM, and a concentration of 0.05% to 5% of the detergent.
- the stain is one or more of Triton X-100, Triton X-114, Tween 20, NP40, and SDS.
- the components of the lysate are Tris-Cl 40 mM having a pH of 7.2, EDTA 1 mM, KCl 15 mM, and 3% Triton X-100.
- the primer used includes an NG primer, an NT primer, and an amplification primer.
- the NG primer and the NT primer comprise a universal sequence and a variable sequence from the 5' end to the 3' end, wherein the universal sequence consists of three or two of four bases of G, A, C and T Composition, provided that the universal sequence does not include G and C at the same time;
- variable sequence of the NG primer is selected from the group consisting of: (N) nGGG, (N) xGTGG(N)y, or a combination thereof;
- variable sequence of the NT primer is selected from the group consisting of: (N) nTTT, (N) mTNTNG, or a combination thereof; wherein N is any nucleotide that can base pair with a natural nucleic acid, each n independently Is a positive integer selected from 3-17, each m is independently a positive integer selected from 3-15, and x and y are each a positive integer selected from 3-13;
- the amplification primer comprises the universal sequence and does not comprise the variable sequence.
- the lyase in the step (3) is selected from one or more of proteinase K, Qiagen Protease, pepsin, papain, trypsin and lysozyme, and the concentration of the lyase is 1 to 25 ⁇ g/ml, preferably 20 ⁇ g/ml; incubation temperature in step (3) is 30-60 ° C, incubation time is 1 min to 12 h, inactivation temperature is 75-95 ° C, inactivation time is 1-15 min; preferably, incubation temperature is 40 ° C, The incubation time was 3 h, the inactivation temperature was 90 ° C, and the inactivation time was 5 min.
- the PCR reaction tube in the PCR reaction in the step (3) contains the amplification mixture, 0.5%-20% of the PCR inhibitor antagonist, 5-20 mM dNTP, 5-100 ⁇ M NG and NT primer, 50-200 ⁇ M amplification.
- a primer 0.5-10 units of nucleic acid polymerase
- the PCR inhibitor antagonist is selected from one or more of DMSO, betaine, formamide, glycerol and albumin
- the nucleic acid polymerase being selected from the group consisting of Phi29 DNA polymerase, Bst DNA polymerase, Vent polymerase, Deep Vent polymerase, Klenow Fragment DNA polymerase I, MMLV reverse transcriptase, AMV reverse transcriptase, HIV reverse transcriptase, One or more of ultra-fidelity DNA polymerase, Taq polymerase, E. col DNA polymerase, LongAmp Taq DNA polymerase, and OneTaq DNA polymerase.
- the components of the amplification mixture are 10-25 mM Tris-HCl, 5-25 mM (NH 4 ) 2 SO 4 , 5-30 mM KCl, 0.5-5 mM MgSO 4 , 0.1%-20% DMSO and 0.05-5% Triton. X-100.
- the components of the amplification mixture are 15 mM Tris-HCl, 15 mM (NH 4 ) 2 SO 4 , 20 mM KCl, 1 mM MgSO 4 , 5% DMSO and 2% Triton X-100.
- the NG and NT primers comprise a universal sequence and a variable sequence from the 5' end to the 3' end, wherein the universal sequence consists of three or two of the four bases G, A, C and T, provided that The universal sequences do not include G and C at the same time; the amplification primers comprise the universal sequence and do not comprise the variable sequence.
- variable sequence is selected from the group consisting of: (N) nGGG, (N) nTTT, (N) mTNTNG, (N) xGTGG(N)y, wherein N is any nucleoside capable of base pairing with a natural nucleic acid
- the acid n is a positive integer selected from 3-17, m is a positive integer selected from 3-15, and x and y are each a positive integer selected from 3-13.
- the NG and NT primers comprise SEQ ID NO: 1 [GTGAGTGATGGTTGAGGTAGTGTGGAGNNNNNNNNNNNN], SEQ ID NO: 2 [GTGAGTGATGGTTGAGGTAGTGTGGAGNNNNNGGG], SEQ ID NO: 3 [GTGAGTGATGGTTGAGGTAGTGTGGAGNNNNNTTT], SEQ ID NO: 4 [GTGAGTGATGGTTGAGGTAGTGTGGAGNNNTNTNG] or the sequence of SEQ ID NO: 5 [GTGAGTGATGGTTGAGGTAGTGTGGAGNNNGTGGNN], wherein N is any nucleotide that can base pair with a natural nucleic acid; the amplification primer has SEQ ID NO: 6 from 5' to 3' Sequence of [GTGAGTGATGGTTGAGGTAGTGTGGAG].
- step (3) The thermal cycling procedure for whole genome amplification in step (3) is as follows:
- the thermal cycling procedure for whole genome amplification in step (3) is as follows:
- the amplification product obtained from the above step (9), according to technical requirements including, but not limited to, Illumina Hiseq, Miseq, Life Technology PGM, Proton sequencer, conventional database construction, sequencing, Data analysis and other steps detect the copy number of each chromosome and chromosome part in the sample genome.
- the copy number of the normal chromosome and the chromosome part is 2.
- the copy number is greater than 2 (such as ⁇ 2.5) or less than 2 (such as ⁇ 1.8)
- it is a copy number anomaly that is, the chromosome is abnormal.
- This normal or abnormal test result represents the normal or abnormal chromosome of the culture-derived embryo. If the chromosomal abnormal embryo is implanted into the mother, it will lead to embryo failure, abortion and other adverse consequences. Only when the embryo with normal chromosomes is implanted into the mother has a higher chance of successful conception.
- the present invention detects embryonic-derived free DNA from an embryonic early in vitro culture medium (blastocyst culture solution) to determine the chromosomal condition of the embryo (whether or not a whole or partial aneuploidy of the chromosome appears). Since embryos release a very small amount (about several tens of picograms) of DNA into blastocyst culture fluid during early in vitro culture and development, in order to use such a small amount of DNA for chromosome aneuploidy detection, DNA must be first large. Uniform amplification of amplitude.
- the volume of the blastocyst culture solution is about 30 ⁇ L, so the embryo-derived DNA in the culture solution is highly diluted, and the composition of the embryo culture solution is complicated, and some of the components may inhibit the amplification of DNA.
- the technical solution in the present invention overcomes the above various technical problems, and successfully establishes a technical method for detecting embryonic chromosome aneuploidy from blastocyst culture fluid.
- the present invention avoids the cell loss and damage caused by the conventional PGS detection sampling method to the embryo, and simplifies the operation of the PGS sample acquisition; in addition, since the blastocyst culture fluid is originally performed for the test tube baby The waste in the in vitro culture stage of the embryo during the operation, the technology of the present invention detects the waste, and almost no additional trouble is added to the clinical condition to evaluate the chromosomal state of the corresponding embryo.
- the present invention also provides a test kit for detecting chromosomal abnormalities of an embryo using a blastocyst culture solution, the kit comprising the following components:
- a primer for PCR comprising an NG primer, an NT primer, and an amplification primer
- the NG primer and the NT primer comprise a universal sequence and a variable sequence from the 5' end to the 3' end, wherein the universal sequence consists of three or two of four bases of G, A, C and T Composition, provided that the universal sequence does not include G and C at the same time;
- variable sequence of the NG primer is selected from the group consisting of: (N) nGGG, (N) xGTGG(N)y, or a combination thereof; and the variable sequence of the NT primer is selected from the group consisting of: (N) nTTT, (N) mTNTNG, or a combination thereof; wherein N is any nucleotide that can base pair with a natural nucleic acid, each n being independently a positive integer selected from 3-17, each m being independently selected from 3- a positive integer of 15, x and y are positive integers selected from 3-13, respectively;
- the amplification primer comprises the universal sequence and does not comprise the variable sequence
- the NG primer, the NT primer, and the amplification primer have the same general purpose sequence.
- the universal sequence has a length of from 20 to 35 nt, preferably from 25 to 30 nt.
- sequence of the NG primer and the NT primer is selected from the group consisting of SEQ ID NO.: 1-5; and the sequence of the amplification primer is shown in SEQ ID NO.: 6.
- the kit further comprises one or more additional detection-related reagents selected from the group consisting of reagents for sequencing, nucleic acid chips, immunofluorescence detection reagents, or combination.
- the kit further comprises a lysate or a lytic enzyme.
- the kit further comprises a label or a label indicating that the amount of the blastocyst culture fluid collected by the kit is 10-100 ⁇ l, preferably 15-80 ⁇ l, more Good place, 20-60 ⁇ l.
- the present invention also provides a use of the test kit of the present invention for preparing a product for detecting chromosomal abnormalities of an embryo using a blastocyst culture solution.
- Example 1 is a result of analyzing chromosomes of A sample by blastocyst culture solution and blastocyst cells in Example 1 of the present invention
- Fig. 2 is a graph showing the results of chromosome detection of B samples by blastocyst culture medium and blastocyst cells in Example 1 of the present invention.
- the present inventors discovered for the first time through extensive screening and testing that the embryos were cultured in a small amount of culture solution, and a very small amount of the culture solution was taken out for detection, and the obtained chromosomal abnormality was found. The test results are extremely accurate. On the basis of this, the inventors completed the present invention.
- the blastocyst culture fluid used in the detection technique of the present invention is a cell-free blastocyst culture fluid.
- the present invention provides a method for genetically detecting a depleted medium (i.e., a culture solution separated from the culture system) after culturing a blastocyst, thereby identifying whether the embryonic chromosome is abnormal.
- a depleted medium i.e., a culture solution separated from the culture system
- the method of performing genetic detection on the "lean" culture solution (that is, the culture solution separated from the culture system) after culturing the blastocyst is not particularly limited, and can be detected by a conventional method, such as two. Generation sequencing, nucleic acid chips, immunofluorescence detection, fluorescent PCR detection, first generation sequencing, third generation sequencing, mass spectrometry detection, or a combination thereof.
- the detecting method comprises the following steps:
- blastocyst culture solution The fertilized egg is obtained by single sperm injection method, and cultured until the blastomere stage on the 3rd day, and then transferred to the newly prepared blastocyst culture droplet for blastocyst culture, at this time It is necessary to change the liquid on the third day, in order to remove the contamination of the detached granulosa cells and unfertilized sperm;
- the embryos forming the blastocysts are aspirated, transferred to a new blastocyst culture solution or enter a vitrification cryopreservation process, and the remaining protoplast culture medium is about 1 microliter to 500 microliters, preferably 10 microliters to 200 microliters, Samples to be collected for preimplantation genetic screening (PGS);
- the whole genome-amplified DNA product is analyzed to identify whether the chromosomal state of the embryo is normal: the second generation sequencing, nucleic acid chip or immunofluorescence detection is used for the analysis.
- the embryos forming the blastocyst are aspirated, transferred to a new blastocyst culture solution or enter a vitrification cryopreservation process, and the remaining primary blastocyst culture solution is about 1 microliter to 500 microliters.
- L preferably 10 microliters to 200 microliters, is the sample that needs to be collected for preimplantation genetic screening (PGS).
- the embryo is cultured in a very small amount of the culture solution, and a very small amount of the culture solution is detected, and the detection result of the obtained chromosomal abnormality is extremely accurate.
- the present invention adopts a single embryo culture system, that is, only one embryo is cultured in one culture liquid droplet.
- the detection results of chromosomal abnormalities obtained by this system are more accurate.
- the embryos forming the blastocysts are aspirated, transferred to a new blastocyst culture solution, or enter the vitrification cryopreservation process, and the remaining primary blastocyst culture solution (about 30 ul) is the sample A and sample B to be collected for PGS.
- the embryos forming the blastocyst are aspirated.
- lysate Tris-Cl 40 mM with pH 7.2, EDTA 1 mM, KCl 15 mM, and 3% Triton X-100
- step 2 1) Transfer the original blastocyst culture solution in the second step of step 1 to the lysate with a mouth pipette.
- the thermal cycle program is:
- the amplified DNA product is subjected to second generation sequencing according to a conventional method to identify whether the chromosomal state of the embryo is normal.
- the results of the second-generation sequencing data showed that in the A sample, the blastocyst culture solution detection method (Fig. A1) and the blastocyst cell detection method (Fig. A2) could detect multiple chromosomal abnormalities; in the B sample, the blastocyst culture Both the liquid detection method (Fig. B1) and the blastocyst detection method (Fig. B2) were judged to be normal chromosomes.
- the above results indicate that the two methods of blastocyst culture and blastocyst detection have the same results for identifying the embryonic chromosome state, which further confirms that the non-invasive detection method is accurate and reliable.
- the cell test showed abnormality, and the test result of the culture solution also showed abnormality.
- the second type of cell test showed normal, and the test results of the culture solution also showed normal.
- the third type The cell test showed normal, and the test result of the culture solution showed abnormality.
- the fourth type The cell test showed abnormality, and the test result of the culture solution also showed normal.
- the results showed that when the cell test was used as the gold standard, the sensitivity of the calculated culture solution was 88.2%, the specificity was 84.0%, the positive predictive value was 78.9, and the negative predictive value was 91.3%. Although the indicators are not 100%, the non-invasive method of providing a test result sufficiently close to the gold standard is sufficient to confirm the beneficial value of the present invention.
- the embryos of 8 patients with fertility difficulties caused by different reasons were tested for embryo culture solution according to the method of Example 1 of the present invention, and the embryos with normal chromosomes were selected for implantation into the mother uterus according to the detection results.
- results of the present invention showed that patients with No. 3 and No. 8 did not have a high-quality fertilized egg, and the embryo was chromosomal abnormal, and thus no embryo transfer was performed.
- results of the remaining 6 patients fully showed that the embryos with normal chromosomes were selected by the method of the present invention to be successfully implanted once after the mother was implanted, and the success rate of embryo transfer and survival was 5/6 (ie, , 83.3%), that is, only one patient did not succeed.
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Abstract
Description
Claims (20)
- 一种利用囊胚培养液检测胚胎染色体异常的方法,其特征在于,包括如下步骤:(1)囊胚培养液的获得:通过单精子注射方法获得受精卵,将其培养至第3天卵裂球期之后转移至新制备的囊胚培养微滴中进行囊胚培养,将形成囊胚的胚胎吸出,转移至新的囊胚培养液中或者进入玻璃化冻存流程,剩余的原囊胚培养液即检测时所需要收集的样本;(2)囊胚培养液的采集:将步骤(1)中获取的原囊胚培养液转移至裂解液中,离心后,样本进入下一步的全基因组扩增步骤;(3)囊胚培养液中微量DNA的全基因组扩增:向步骤(2)中获得的囊胚培养液与裂解液的混合物中加入裂解酶,混匀后孵育,而后使裂解酶失活,取出裂解产物加入PCR反应管中进行基因组扩增反应;和(4)将全基因组扩增后的DNA产物进行分析,以鉴定胚胎的染色体状态是否正常:分析时采用二代测序、核酸芯片或者免疫荧光检测。
- 根据权利要求1所述的方法,其特征在于,步骤(2)中裂解液的成分是PH为7.0~8.0的Tris-Cl 25-45mM,EDTA 0.5-3mM,KCl 10-25mM以及浓度为0.05%-5%的去污剂,所述去污剂为Triton X-100、Triton X-114、吐温20、NP40和SDS中的一种或多种。
- 根据权利要求2所述的方法,其特征在于,裂解液的成分优选为PH为7.2的Tris-Cl 40mM,EDTA 1mM,KCl 15mM以及3%的Triton X-100。
- 根据权利要求1所述的方法,其特征在于,步骤(3)中的裂解酶选自蛋白酶K、Qiagen Protease、胃蛋白酶、木瓜蛋白酶、胰蛋白酶和溶菌酶中的一种或多种,所述裂解酶的浓度为1-25μg/ml。
- 根据权利要求4所述的方法,其特征在于,所述裂解酶的浓度优选为20μg/ml。
- 根据权利要求1所述的方法,其特征在于,步骤(3)中孵育温度为30-60℃,孵育时间为1min至12h,失活温度为75-95℃,失活时间为1-15min。
- 根据权利要求6所述的方法,其特征在于,步骤(3)中优选的,孵育温度为40℃,孵育时间为3h,失活温度为90℃,失活时间为5min。
- 根据权利要求1所述的方法,其特征在于,步骤(3)中进行PCR反应时 的PCR反应管中含有扩增混合液、0.5%-20%的PCR抑制物对抗剂、5-20mM dNTP、5-100μM NG和NT引物、50-200μM扩增引物、0.5-10单位核酸聚合酶,所述PCR抑制物对抗剂选自DMSO、甜菜碱、甲酰胺、甘油和白蛋白中的一种或多种,所述核酸聚合酶选自Phi29 DNA聚合酶、Bst DNA聚合酶、Vent聚合酶、Deep Vent聚合酶、Klenow Fragment DNA聚合酶I、MMLV反转录酶、AMV反转录酶、HIV反转录酶、超保真DNA聚合酶、Taq聚合酶、E.coli DNA聚合酶、LongAmp Taq DNA聚合酶和OneTaq DNA聚合酶中的一种或多种。
- 根据权利要求8所述的方法,其特征在于,所述扩增混合液的成分为10-25mM Tris-HCl,5-25mM(NH4)2SO4,5-30mM KCl,0.5-5mM MgSO4,0.1%-20%DMSO和0.05-5%Triton X-100。
- 根据权利要求9所述的方法,其特征在于,所述扩增混合液的成分优选为15mM Tris-HCl,15mM(NH4)2SO4,20mM KCl,1mM MgSO4,5%DMSO和2%Triton X-100。
- 根据权利要求8所述的方法,其特征在于,所述NG和NT引物从5’端到3’端包含通用序列和可变序列,其中所述通用序列由G、A、C和T四种碱基中的三种或者两种组成,条件是所述通用序列不同时包括G和C;所述扩增引物包含所述通用序列且不包含所述可变序列。
- 根据权利要求11所述的方法,其特征在于,所述可变序列选自下组:(N)nGGG、(N)nTTT,(N)mTNTNG,(N)xGTGG(N)y,其中N为任意的可与天然核酸进行碱基配对的核苷酸,n是选自3-17的正整数,m是选自3-15的正整数,x和y分别是选自3-13的正整数。
- 根据权利要求12所述的方法,其特征在于,所述NG和NT引物包括SEQ ID NO:1[GTGAGTGATGGTTGAGGTAGTGTGGAGNNNNNNNN]、SEQ ID NO:2[GTGAGTGATGGTTGAGGTAGTGTGGAGNNNNNGGG]、SEQ ID NO:3[GTGAGTGATGGTTGAGGTAGTGTGGAGNNNNNTTT]、SEQ ID NO:4[GTGAGTGATGGTTGAGGTAGTGTGGAGNNNTNTNG]或SEQ ID NO:5[GTGAGTGATGGTTGAGGTAGTGTGGAGNNNGTGGNN]的序列,其中N为任意的可与天然核酸进行碱基配对的核苷酸;所述扩增引物从5’到3’具有SEQ ID NO:6[GTGAGTGATGGTTGAGGTAGTGTGGAG]的序列。
- 根据权利要求1所述的方法,其特征在于,步骤(3)中全基因组扩增的热循环程序如下所述:(1)在介于90-98℃之间的第一变性温度反应5-20s;(2)在介于5-15℃之间的第一退火温度反应5-60s,在介于15-25℃之间的第二退火温度反应5-60s,在介于25-35℃之间的第三退火温度反应30-80s,在介于35-45℃之间的第四退火温度反应5-60s,在介于45-55℃之间的第五退火温度反应5-60s;(3)在介于55-80℃之间的第一延伸温度反应10-150min;(4)在介于90-98℃之间的第二变性温度反应5-30s;(5)在介于45-70℃之间的第六退火温度反应10-30s;(6)在介于60-80℃之间的第二延伸温度反应1-10min;(7)重复步骤(4)到(6)5至50个循环;(8)在介于60-80℃之间的温度下继续延伸反应1-10min;(9)将扩增后的产物在0-5℃下冷藏保存。
- 根据权利要求14所述的方法,其特征在于,步骤(3)中全基因组扩增的热循环程序如下所述:(1)在第一变性温度95℃下反应10s;(2)在第一退火温度10℃下反应45s,在第二退火温度20℃下反应45s,在第三退火温度30℃下反应60s,在第四退火温度40℃下反应45s,在第五退火温度50℃下反应45s;(3)在第一延伸温度62℃下反应90min;(4)在第二变性温度95℃下反应20s;(5)在第六退火温度59℃下反应20s;(6)在第二延伸温度72℃下反应3min;(7)重复步骤(4)到(6)10至30个循环;(8)在72℃下继续延伸反应5min;(9)将扩增后的产物在4℃下冷藏保存。
- 如权利要求1所述的方法,其特征在于,在步骤(3)中,进行PCR反应时使用的引物包括NG引物、NT引物以及扩增引物,其中,所述的NG引物和NT引物从5’端到3’端包含通用序列和可变序列,其中所述通用序列由G、A、C和T四种碱基中的三种或者两种组成,条件是所述通用序列不同时包括G和C;所述NG引物的可变序列选自下组:(N)nGGG、(N)xGTGG(N)y、或其组合; 而所述NT引物的可变序列选自下组:(N)nTTT、(N)mTNTNG、或其组合;其中N为任意的可与天然核酸进行碱基配对的核苷酸,各n独立地是选自3-17的正整数,各m独立地是选自3-15的正整数,x和y分别是选自3-13的正整数;而所述扩增引物包含所述通用序列且不包含所述可变序列。
- 一种利用囊胚培养液检测胚胎染色体异常的检测试剂盒,其特征在于,所述试剂盒含有如下组分:(i)用于PCR扩增的引物,所述引物包括NG引物、NT引物以及扩增引物,其中,所述的NG引物和NT引物从5’端到3’端包含通用序列和可变序列,其中所述通用序列由G、A、C和T四种碱基中的三种或者两种组成,条件是所述通用序列不同时包括G和C;所述NG引物的可变序列选自下组:(N)nGGG、(N)xGTGG(N)y、或其组合;而所述NT引物的可变序列选自下组:(N)nTTT、(N)mTNTNG、或其组合;其中N为任意的可与天然核酸进行碱基配对的核苷酸,各n独立地是选自3-17的正整数,各m独立地是选自3-15的正整数,x和y分别是选自3-13的正整数;而所述扩增引物包含所述通用序列且不包含所述可变序列;以及(ii)任选的囊胚培养液。
- 如权利要求17所述的试剂盒,其特征在于,所述的NG引物、NT引物以及扩增引物具有相同的通用序列。
- 如权利要求17所述的试剂盒,其特征在于,所述的通用序列的长度为20-35nt,较佳地25-30nt。
- 一种权利要求17所述检测试剂盒的用途,其特征在于,用于制备利用囊胚培养液检测胚胎染色体异常的产品。
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BR112018009105A BR112018009105A8 (pt) | 2015-11-05 | 2016-11-04 | método para detectar anomalia cromossómica em embrião usando cultura de blastocisto |
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BR112018009105A8 (pt) | 2019-02-26 |
AU2016351034B2 (en) | 2020-12-24 |
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BR112018009105A2 (pt) | 2018-11-06 |
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AU2016351034A1 (en) | 2018-06-28 |
AU2020286291A1 (en) | 2021-01-21 |
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