SG155052A1 - Bacteria with reduced genome - Google Patents
Bacteria with reduced genomeInfo
- Publication number
- SG155052A1 SG155052A1 SG200702708-9A SG2007027089A SG155052A1 SG 155052 A1 SG155052 A1 SG 155052A1 SG 2007027089 A SG2007027089 A SG 2007027089A SG 155052 A1 SG155052 A1 SG 155052A1
- Authority
- SG
- Singapore
- Prior art keywords
- genome
- bacterium
- methods
- present
- smaller
- Prior art date
Links
Classifications
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
- C12N15/00—Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
- C12N15/09—Recombinant DNA-technology
- C12N15/10—Processes for the isolation, preparation or purification of DNA or RNA
- C12N15/102—Mutagenizing nucleic acids
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
- C12N1/00—Microorganisms, e.g. protozoa; Compositions thereof; Processes of propagating, maintaining or preserving microorganisms or compositions thereof; Processes of preparing or isolating a composition containing a microorganism; Culture media therefor
- C12N1/08—Reducing the nucleic acid content
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
- C12N1/00—Microorganisms, e.g. protozoa; Compositions thereof; Processes of propagating, maintaining or preserving microorganisms or compositions thereof; Processes of preparing or isolating a composition containing a microorganism; Culture media therefor
- C12N1/20—Bacteria; Culture media therefor
- C12N1/205—Bacterial isolates
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
- C12N15/00—Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
- C12N15/09—Recombinant DNA-technology
- C12N15/63—Introduction of foreign genetic material using vectors; Vectors; Use of hosts therefor; Regulation of expression
- C12N15/74—Vectors or expression systems specially adapted for prokaryotic hosts other than E. coli, e.g. Lactobacillus, Micromonospora
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12R—INDEXING SCHEME ASSOCIATED WITH SUBCLASSES C12C - C12Q, RELATING TO MICROORGANISMS
- C12R2001/00—Microorganisms ; Processes using microorganisms
- C12R2001/01—Bacteria or Actinomycetales ; using bacteria or Actinomycetales
- C12R2001/185—Escherichia
- C12R2001/19—Escherichia coli
Landscapes
- Health & Medical Sciences (AREA)
- Life Sciences & Earth Sciences (AREA)
- Engineering & Computer Science (AREA)
- Chemical & Material Sciences (AREA)
- Genetics & Genomics (AREA)
- Organic Chemistry (AREA)
- Bioinformatics & Cheminformatics (AREA)
- Biotechnology (AREA)
- Wood Science & Technology (AREA)
- Zoology (AREA)
- General Engineering & Computer Science (AREA)
- Biomedical Technology (AREA)
- General Health & Medical Sciences (AREA)
- Microbiology (AREA)
- Biochemistry (AREA)
- Molecular Biology (AREA)
- Virology (AREA)
- Tropical Medicine & Parasitology (AREA)
- Medicinal Chemistry (AREA)
- Physics & Mathematics (AREA)
- Biophysics (AREA)
- Plant Pathology (AREA)
- Crystallography & Structural Chemistry (AREA)
- Micro-Organisms Or Cultivation Processes Thereof (AREA)
- Preparation Of Compounds By Using Micro-Organisms (AREA)
- Medicines Containing Material From Animals Or Micro-Organisms (AREA)
- Agricultural Chemicals And Associated Chemicals (AREA)
- Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
Applications Claiming Priority (1)
Application Number | Priority Date | Filing Date | Title |
---|---|---|---|
US10/057,582 US6989265B2 (en) | 2002-01-23 | 2002-01-23 | Bacteria with reduced genome |
Publications (1)
Publication Number | Publication Date |
---|---|
SG155052A1 true SG155052A1 (en) | 2009-09-30 |
Family
ID=22011493
Family Applications (1)
Application Number | Title | Priority Date | Filing Date |
---|---|---|---|
SG200702708-9A SG155052A1 (en) | 2002-01-23 | 2003-01-22 | Bacteria with reduced genome |
Country Status (19)
Country | Link |
---|---|
US (2) | US6989265B2 (fr) |
EP (1) | EP1483367B1 (fr) |
JP (2) | JP4658478B2 (fr) |
KR (1) | KR100967592B1 (fr) |
CN (2) | CN103540543B (fr) |
AT (1) | ATE469230T1 (fr) |
AU (2) | AU2003239116B8 (fr) |
BR (2) | BRPI0307125A2 (fr) |
CA (1) | CA2473922C (fr) |
DE (1) | DE60332708D1 (fr) |
HK (1) | HK1072273A1 (fr) |
IL (2) | IL162911A0 (fr) |
IS (1) | IS7355A (fr) |
MX (1) | MX264365B (fr) |
NO (1) | NO330918B1 (fr) |
NZ (1) | NZ534010A (fr) |
SG (1) | SG155052A1 (fr) |
WO (1) | WO2003070880A2 (fr) |
ZA (1) | ZA200405509B (fr) |
Families Citing this family (35)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
US8039243B2 (en) * | 2002-01-23 | 2011-10-18 | Wisconsin Alumni Research Foundation | Insertion sequence-free bacteria |
US8119365B2 (en) * | 2002-01-23 | 2012-02-21 | Wisconsin Alumni Research Foundation | Insertion sequence-free bacteria |
US6989265B2 (en) * | 2002-01-23 | 2006-01-24 | Wisconsin Alumni Research Foundation | Bacteria with reduced genome |
US8765408B2 (en) | 2002-01-23 | 2014-07-01 | Wisconsin Alumni Research Foundation | Prophage element-free bacteria |
US20060270043A1 (en) * | 2002-01-23 | 2006-11-30 | Blattner Frederick R | Bacteria with reduced genome |
US7303906B2 (en) | 2002-09-06 | 2007-12-04 | Wisconsin Alumni Research Foundation | Competent bacteria |
JP2007534320A (ja) * | 2004-02-27 | 2007-11-29 | プレジデント・アンド・フェロウズ・オブ・ハーバード・カレッジ | ポリヌクレオチド合成法 |
WO2005087940A1 (fr) * | 2004-03-11 | 2005-09-22 | Wisconsin Alumni Research Foundation | Micro-organismes genetiquement modifies presentant un metabolisme modifie |
KR100585450B1 (ko) * | 2004-09-02 | 2006-06-07 | 한국과학기술원 | 유전자 결실을 위한 선형 dna 단편, 이를 이용하여생물막 형성이 억제된 대장균 변이주 및 이의 제조 방법 |
AU2005308101A1 (en) * | 2004-11-26 | 2006-06-01 | Kyowa Hakko Kirin Co., Ltd. | Industrially useful microorganism |
WO2007005053A1 (fr) * | 2005-06-30 | 2007-01-11 | Codon Devices, Inc. | Procédés d'assemblage hiérarchique pour l'ingénierie des génomes |
EP1915445A2 (fr) | 2005-08-20 | 2008-04-30 | Scarab Genomics, LLC | E. coli a genome reduit |
MX297190B (en) | 2005-09-08 | 2012-03-16 | Scarab Genomics Llc | Oxygen-regulated microorganisms |
DE102006004871A1 (de) * | 2006-02-02 | 2007-08-09 | Wacker Chemie Ag | Mikroorganismenstamm zur Produktion von rekombinanten Proteinen |
EP2027268B1 (fr) * | 2006-04-22 | 2010-07-07 | Scarab Genomics, LLC | PROCÉDÉS ET COMPOSITIONS PERMETTANT DE PRODUIRE DES PROTÉINES RECOMBINANTES EN UTILISANT UN GÈNE D'ARNt |
US20100144548A1 (en) | 2006-08-03 | 2010-06-10 | Wisconsin Alumni Research Foundation | Vector systems |
EP2344646A2 (fr) * | 2008-09-12 | 2011-07-20 | Scarab Genomics, LLC | Bactofection d'un génome propre |
US20120093865A2 (en) | 2009-02-12 | 2012-04-19 | Scarab Genomics Llc | Compositions comprising reduced genome bacteria for use in treatment of sepsis |
CN102666838B (zh) | 2009-11-18 | 2018-04-10 | 麦兰特公司 | 用于高效产生化学品的工程化微生物 |
WO2011080505A2 (fr) | 2009-12-28 | 2011-07-07 | Bigdna Ltd | Procédé de culture de phage pour un usage commercial |
US10224182B2 (en) | 2011-10-17 | 2019-03-05 | Novellus Systems, Inc. | Mechanical suppression of parasitic plasma in substrate processing chamber |
WO2013059595A1 (fr) | 2011-10-20 | 2013-04-25 | Scarab Genomics, Llc | Bactéries à génome réduit ayant une stabilité génétique améliorée |
EP2825663B1 (fr) | 2012-03-13 | 2019-08-07 | Board of Trustees of the University of Arkansas | Plateforme d'expression et de purification de protéines à base de séparatome |
US9484233B2 (en) | 2012-04-13 | 2016-11-01 | Novellus Systems, Inc. | Carousel reactor for multi-station, sequential processing systems |
EP2916854A4 (fr) * | 2012-11-06 | 2016-06-22 | Aduro Biotech Inc | Espèces bactériennes éventuellement atténuées et procédés de préparation et d'utilisation associés |
US9449795B2 (en) | 2013-02-28 | 2016-09-20 | Novellus Systems, Inc. | Ceramic showerhead with embedded RF electrode for capacitively coupled plasma reactor |
US11053513B2 (en) | 2013-07-15 | 2021-07-06 | Donald Danforth Plant Science Center | Enhanced oil production and stress tolerance in plants |
WO2015042105A1 (fr) | 2013-09-17 | 2015-03-26 | Board Of Trustees Of The University Of Arkansas | Plate-forme de purification et d'expression de protéines sur la base du séparatome de e. coli |
JP6545676B2 (ja) | 2013-11-14 | 2019-07-17 | スカラブ ゲノミクス, エルエルシー | 改善された代謝能力を有する細菌 |
JP6473460B2 (ja) * | 2014-03-03 | 2019-02-20 | スカラブ ゲノミクス, エルエルシー | 大腸菌における組換えcrm197の産生強化 |
ES2773601T3 (es) | 2014-07-22 | 2020-07-13 | Nmc Inc | Sistemas de fijación de carbono mejorados en plantas y algas |
BR112017020916B1 (pt) | 2015-04-02 | 2022-01-25 | Scarab Genomics, Llc | Processo de fermentação contínua para a produção de produto biológico |
AU2018329671B2 (en) | 2017-09-05 | 2023-12-07 | Scarab Genomics, Llc | Methods and compositions for improved expression of recombinant proteins |
CN112680393B (zh) * | 2021-01-15 | 2023-04-07 | 江南大学 | 一种能提高生产效率的无菌毛大肠杆菌的构建及应用 |
CN114410564B (zh) * | 2022-04-02 | 2022-07-19 | 中国农业大学 | 一种用于5-氨基乙酰丙酸生产的菌株及生产方法 |
Family Cites Families (23)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
US647216A (en) | 1899-10-18 | 1900-04-10 | Charles N Perkins | Nozzle-holder. |
DE3586386T2 (de) | 1984-10-05 | 1993-01-14 | Genentech Inc | Dna, zellkulturen und verfahren zur sekretion von heterologen proteinen und periplasmische proteinrueckgewinnung. |
US4981797A (en) | 1985-08-08 | 1991-01-01 | Life Technologies, Inc. | Process of producing highly transformable cells and cells produced thereby |
US4851348A (en) | 1986-07-16 | 1989-07-25 | Cold Spring Harbor Laboratory | Biologically pure escherichia coli cell line which is a deoR- mutant and which is more transformation efficient with foreign plasmids than deoR+ escherichia coli cell lines, processes for obtaining these cell lines, methods of use |
EP0300035B1 (fr) * | 1987-01-30 | 1995-05-10 | The President And Fellows Of Harvard College | Mutants de protease periplasmique d'escherichia coli |
JP2676511B2 (ja) | 1987-03-23 | 1997-11-17 | 株式会社日立製作所 | 酢酸を指標とした培養方法及びその装置 |
US5578464A (en) * | 1989-10-31 | 1996-11-26 | Schering Corporation | E. coli secretory strains |
US5792632A (en) | 1992-05-05 | 1998-08-11 | Institut Pasteur | Nucleotide sequence encoding the enzyme I-SceI and the uses thereof |
US5474896A (en) * | 1992-05-05 | 1995-12-12 | Institut Pasteur | Nucleotide sequence encoding the enzyme I-SceI and the uses thereof |
US5747662A (en) * | 1995-03-01 | 1998-05-05 | Genentech, Inc. | Methods and compositions for secretion of heterologous polypeptides |
EP0798380A3 (fr) * | 1996-03-28 | 1998-04-29 | Mitsui Toatsu Chemicals, Inc. | Méthode de production des protéines par sécrétion |
FR2750704B1 (fr) * | 1996-07-04 | 1998-09-25 | Rhone Poulenc Rorer Sa | Procede de production d'adn therapeutique |
JP2003524368A (ja) * | 1997-08-26 | 2003-08-19 | アリアド ジーン セラピューティクス インコーポレイテッド | ニ量化ドメイン、三量化ドメインまたは四量化ドメインおよび補足的非相同転写活性化ドメイン、転写抑制ドメイン、dna結合ドメインまたはリガンド結合ドメインを含む融合蛋白 |
US6015709A (en) * | 1997-08-26 | 2000-01-18 | Ariad Pharmaceuticals, Inc. | Transcriptional activators, and compositions and uses related thereto |
ES2337027T3 (es) * | 1997-12-05 | 2010-04-20 | Europaisches Laboratorium Fur Molekularbiologie (Embl) | Nuevo metodo de clonacion de dna basado en el sistema de recombinacion rece-rect de e. coli. |
US6022952A (en) * | 1998-04-01 | 2000-02-08 | University Of Alberta | Compositions and methods for protein secretion |
JP2000333684A (ja) * | 1999-05-26 | 2000-12-05 | Novo Nordisk As | グルコースイソメラーゼ活性を有するポリペプチド及びそれをコードする核酸 |
AU1206801A (en) | 1999-10-13 | 2001-04-23 | University Of Georgia Research Foundation, Inc., The | High yield protein expression system and methods |
ES2394877T3 (es) | 2000-08-14 | 2013-02-06 | The Government Of The United States Of America As Represented By The Secretary Of The Department Of Health And Human Services | Recombinación homóloga mejorada mediada por proteínas de recombinación de lambda |
KR20050044706A (ko) | 2001-12-05 | 2005-05-12 | 디에스엠 아이피 어셋츠 비.브이. | 방향족 아미노산 대사산물 또는 이의 유도체의 생산 방법 |
US6989265B2 (en) | 2002-01-23 | 2006-01-24 | Wisconsin Alumni Research Foundation | Bacteria with reduced genome |
US7303906B2 (en) | 2002-09-06 | 2007-12-04 | Wisconsin Alumni Research Foundation | Competent bacteria |
WO2005087940A1 (fr) | 2004-03-11 | 2005-09-22 | Wisconsin Alumni Research Foundation | Micro-organismes genetiquement modifies presentant un metabolisme modifie |
-
2002
- 2002-01-23 US US10/057,582 patent/US6989265B2/en not_active Expired - Lifetime
-
2003
- 2003-01-22 AU AU2003239116A patent/AU2003239116B8/en not_active Expired
- 2003-01-22 MX MXPA04006942 patent/MX264365B/es active IP Right Grant
- 2003-01-22 BR BRPI0307125A patent/BRPI0307125A2/pt active IP Right Grant
- 2003-01-22 CA CA2473922A patent/CA2473922C/fr not_active Expired - Lifetime
- 2003-01-22 NZ NZ534010A patent/NZ534010A/en not_active IP Right Cessation
- 2003-01-22 WO PCT/US2003/001800 patent/WO2003070880A2/fr active IP Right Grant
- 2003-01-22 AT AT03733830T patent/ATE469230T1/de not_active IP Right Cessation
- 2003-01-22 CN CN201310363511.5A patent/CN103540543B/zh not_active Expired - Lifetime
- 2003-01-22 CN CN03802545.0A patent/CN1620497B/zh not_active Expired - Lifetime
- 2003-01-22 DE DE60332708T patent/DE60332708D1/de not_active Expired - Lifetime
- 2003-01-22 BR BRPI0307125-1A patent/BRPI0307125B1/pt unknown
- 2003-01-22 KR KR1020047011334A patent/KR100967592B1/ko active IP Right Grant
- 2003-01-22 IL IL16291103A patent/IL162911A0/xx unknown
- 2003-01-22 JP JP2003569773A patent/JP4658478B2/ja not_active Expired - Lifetime
- 2003-01-22 EP EP03733830A patent/EP1483367B1/fr not_active Expired - Lifetime
- 2003-01-22 SG SG200702708-9A patent/SG155052A1/en unknown
-
2004
- 2004-07-12 ZA ZA2004/05509A patent/ZA200405509B/en unknown
- 2004-07-20 IS IS7355A patent/IS7355A/is unknown
- 2004-08-19 NO NO20043465A patent/NO330918B1/no not_active IP Right Cessation
-
2005
- 2005-05-13 HK HK05103985.6A patent/HK1072273A1/xx not_active IP Right Cessation
- 2005-07-01 US US11/173,900 patent/US8043842B2/en not_active Expired - Fee Related
-
2008
- 2008-06-30 AU AU2008202865A patent/AU2008202865A1/en not_active Abandoned
- 2008-11-18 IL IL195374A patent/IL195374A/en active IP Right Grant
-
2010
- 2010-09-21 JP JP2010210443A patent/JP5255030B2/ja not_active Expired - Lifetime
Non-Patent Citations (3)
Title |
---|
MARKERLESS GENE REPLACEMENT IN ESCHERICHIA COLI STIMULATED BY A DOUBLE-STRAND BREAK IN THE CHROMOSOME, Nucl. Acids Res. 27:4409-4415 * |
ONE-STEP INACTIVATION OF CHROMOSOMAL GENES IN ESCHERICHIA COLI K- 12 USING PCR PRODUCTS, Proc. Natl. Acad. Sci. 97:6640-6649. * |
Posfai et al. (1997). Versatile insertion plasmids for targeted genome manipulations in bacteria: isolation, deletion, and rescue of the pathogenicity island LEE of the Escherichia coli O157:H7 genome. J. Bacteriol. 179: 4426-4428 * |
Also Published As
Similar Documents
Publication | Publication Date | Title |
---|---|---|
HK1072273A1 (en) | Bacteria with reduced genome | |
Walker et al. | Development of both type I–B and type II CRISPR/Cas genome editing systems in the cellulolytic bacterium Clostridium thermocellum | |
US10767173B2 (en) | Method for converting genome sequence of gram-positive bacterium by specifically converting nucleic acid base of targeted DNA sequence, and molecular complex used in same | |
JP6621464B2 (ja) | 欠失突然変異 | |
EP3132036B1 (fr) | Mutations ciblees | |
US11946067B2 (en) | Optimized genetic tool for modifying Clostridium bacteria | |
Cañez et al. | Outcomes and characterization of chromosomal self-targeting by native CRISPR-Cas systems in Streptococcus thermophilus | |
AU2002345084A1 (en) | Process for the preparation of l-amino acids using strains of the enterobacteriaceae family which contain an enhanced succ or sucd gene | |
CN105505975B (zh) | 芽胞杆菌基因无痕敲除/入质粒、方法和试剂盒 | |
Walters et al. | Shuttle vector system for Methanococcus maripaludis with improved transformation efficiency | |
Goh et al. | Portable CRISPR-Cas9N system for flexible genome engineering in Lactobacillus acidophilus, Lactobacillus gasseri, and Lactobacillus paracasei | |
Lim et al. | Programmed gRNA removal system for CRISPR-Cas9-mediated multi-round genome editing in Bacillus subtilis | |
Zocca et al. | The CRISPR toolbox for the gram-positive model bacterium Bacillus subtilis | |
Jiang et al. | Highly efficient genome editing in Xanthomonas oryzae pv. oryzae through repurposing the endogenous type I‐C CRISPR‐Cas system | |
CN108374021A (zh) | 一种修饰水稻OsTFIIAγ1基因培育广谱抗白叶枯病水稻的方法 | |
US20220243170A1 (en) | Optimized genetic tool for modifying bacteria | |
BR112021011983A2 (pt) | Bactérias clostridium geneticamente modificadas, preparação e utilização das mesmas | |
CN105002129B (zh) | 高接合转移率的希瓦氏菌wp3菌株及其构建方法和应用 | |
US11879134B1 (en) | Recombineering machinery to increase homology directed genome editing in thermophilic microbes | |
CN115976086B (zh) | 一种细菌CRISPR-Cas9基因编辑的方法和应用 | |
Arber | Genetic variation and molecular darwinism | |
WO2003104441A3 (fr) | Nouvelle souche bacterienne, compositions derivees de celle-ci et procedes d'utilisation de celle-ci aux fins de traitement de maladies associees au peptide beta-amyloide ( dollar g(b)ap) | |
Goodwin | Microbial Genome Sequencing- Where Are We Now? | |
Schwarz et al. | New tools for the genetic modification of industrial Clostridia | |
Mittra et al. | CRISPR/Cas9: An Invention for Plant Breeding and Agricultural Sustainability |