BR112014029988A2 - seleção de simbiotas por triagem de múltiplas associações de hospedeiro-simbiota - Google Patents
seleção de simbiotas por triagem de múltiplas associações de hospedeiro-simbiotaInfo
- Publication number
- BR112014029988A2 BR112014029988A2 BR112014029988A BR112014029988A BR112014029988A2 BR 112014029988 A2 BR112014029988 A2 BR 112014029988A2 BR 112014029988 A BR112014029988 A BR 112014029988A BR 112014029988 A BR112014029988 A BR 112014029988A BR 112014029988 A2 BR112014029988 A2 BR 112014029988A2
- Authority
- BR
- Brazil
- Prior art keywords
- organisms
- symbiotic
- organism
- host
- libraries
- Prior art date
Links
Classifications
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- A—HUMAN NECESSITIES
- A01—AGRICULTURE; FORESTRY; ANIMAL HUSBANDRY; HUNTING; TRAPPING; FISHING
- A01H—NEW PLANTS OR NON-TRANSGENIC PROCESSES FOR OBTAINING THEM; PLANT REPRODUCTION BY TISSUE CULTURE TECHNIQUES
- A01H17/00—Symbiotic or parasitic combinations including one or more new plants, e.g. mycorrhiza
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
- C12N15/00—Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
- C12N15/09—Recombinant DNA-technology
- C12N15/10—Processes for the isolation, preparation or purification of DNA or RNA
- C12N15/1034—Isolating an individual clone by screening libraries
- C12N15/1058—Directional evolution of libraries, e.g. evolution of libraries is achieved by mutagenesis and screening or selection of mixed population of organisms
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- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
- C12N15/00—Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
- C12N15/09—Recombinant DNA-technology
- C12N15/10—Processes for the isolation, preparation or purification of DNA or RNA
- C12N15/1034—Isolating an individual clone by screening libraries
- C12N15/1079—Screening libraries by altering the phenotype or phenotypic trait of the host
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
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- G—PHYSICS
- G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
- G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
- G16B30/00—ICT specially adapted for sequence analysis involving nucleotides or amino acids
- G16B30/10—Sequence alignment; Homology search
-
- G—PHYSICS
- G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
- G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
- G16B35/00—ICT specially adapted for in silico combinatorial libraries of nucleic acids, proteins or peptides
- G16B35/10—Design of libraries
Landscapes
- Life Sciences & Earth Sciences (AREA)
- Health & Medical Sciences (AREA)
- Chemical & Material Sciences (AREA)
- Engineering & Computer Science (AREA)
- Genetics & Genomics (AREA)
- Organic Chemistry (AREA)
- Zoology (AREA)
- Wood Science & Technology (AREA)
- Bioinformatics & Cheminformatics (AREA)
- Biotechnology (AREA)
- General Engineering & Computer Science (AREA)
- Microbiology (AREA)
- Biomedical Technology (AREA)
- Biophysics (AREA)
- Molecular Biology (AREA)
- Physics & Mathematics (AREA)
- Biochemistry (AREA)
- General Health & Medical Sciences (AREA)
- Crystallography & Structural Chemistry (AREA)
- Plant Pathology (AREA)
- Bioinformatics & Computational Biology (AREA)
- Botany (AREA)
- Environmental Sciences (AREA)
- Developmental Biology & Embryology (AREA)
- Proteomics, Peptides & Aminoacids (AREA)
- Tropical Medicine & Parasitology (AREA)
- Natural Medicines & Medicinal Plants (AREA)
- Mycology (AREA)
- Ecology (AREA)
- Analytical Chemistry (AREA)
- Immunology (AREA)
- Breeding Of Plants And Reproduction By Means Of Culturing (AREA)
- Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
- Micro-Organisms Or Cultivation Processes Thereof (AREA)
- Preparation Of Compounds By Using Micro-Organisms (AREA)
- Physiology (AREA)
Abstract
abstract: selection of symbiota by screening multiple host-symbiont associations the present invention relates to new methods of selecting and breeding organisms, in particular organisms which exhibit symbiotic behaviour with symbionts, and to new organisms and symbiota developed thereby, such as plant or grass and endophyte symbiota. multiple symbionts are deployed in multiple organisms and selected for improved symbiotic compatibility and performance early in the breeding process. methods include producing improved organisms from germplasm, by inoculating host organism germplasm libraries with symbionts selected from symbiont libraries and selecting improved host organisms exhibiting desired symbiota characteristics, and selection of organism-symbiont associations with a desired genetic and metabolic profile by metagenomic analysis of nucleic acid libraries from an organism or organism-symbiont association. tradução do resumo patente de invenção: "seleção de simbiotas por triagem de múltiplas associações de hospedeiro-simbiota". a presente invenção se refere a novos métodos para seleção e produção de novos organismos, em particular organismos os quais apresentam comportamento simbiótico com simbiotas, e a novos organismos e simbiotas desenvolvidos deste modo, tais como simbiotas de plantas ou de gramínea e endófitas. múltiplos simbiotas são im-plantados em múltiplos organismos e selecionados para aprimorar a compatibilidade e a performance simbióticas precocemente no processo de produção. os métodos incluem a produção de organismos apri-morados a partir de germoplasma, inoculando, em um organismo hos-pedeiro, bibliotecas de germoplasmas com simbiotas selecionados entre bibliotecas de simbiotas e selecionando organismos hospedeiros aprimorados apresentando as características do simbiota desejadas, e a seleção de associações de organismo-simbiota com um perfil genético e metabólico desejados por análise metagenômica de bibliotecas de ácidos nucléicos de um organismo ou de uma associação de organismo-simbiota.
Applications Claiming Priority (12)
Application Number | Priority Date | Filing Date | Title |
---|---|---|---|
US201261654396P | 2012-06-01 | 2012-06-01 | |
AU2012902284 | 2012-06-01 | ||
US61/654,396 | 2012-06-01 | ||
AU2012902282A AU2012902282A0 (en) | 2012-06-01 | Method for rapid endophyte viability assessment | |
AU2012902284A AU2012902284A0 (en) | 2012-06-01 | Molecular phenotyping method | |
AU2012902280 | 2012-06-01 | ||
AU2012902282 | 2012-06-01 | ||
AU2012902280A AU2012902280A0 (en) | 2012-06-01 | Method for selection of stable symbiota | |
US201261697933P | 2012-09-07 | 2012-09-07 | |
US61/697,933 | 2012-09-07 | ||
US201261731341P | 2012-11-29 | 2012-11-29 | |
AU2013177615 | 2013-12-05 |
Publications (3)
Publication Number | Publication Date |
---|---|
BR112014029988A2 true BR112014029988A2 (pt) | 2017-06-27 |
BR112014029988A8 BR112014029988A8 (pt) | 2021-06-08 |
BR112014029988B1 BR112014029988B1 (pt) | 2022-06-28 |
Family
ID=49672174
Family Applications (1)
Application Number | Title | Priority Date | Filing Date |
---|---|---|---|
BR112014029988-9A BR112014029988B1 (pt) | 2012-06-01 | 2013-05-29 | Método para produzir uma planta aprimorada e para seleção genômica de associações de planta-simbionte |
Country Status (12)
Country | Link |
---|---|
US (2) | US10631516B2 (pt) |
EP (1) | EP2854514B1 (pt) |
JP (2) | JP6421115B2 (pt) |
CN (1) | CN104883875B (pt) |
AR (1) | AR091228A1 (pt) |
AU (1) | AU2013203272C1 (pt) |
BR (1) | BR112014029988B1 (pt) |
CA (1) | CA2875119C (pt) |
DK (1) | DK2854514T3 (pt) |
NZ (1) | NZ630680A (pt) |
UY (1) | UY34836A (pt) |
WO (1) | WO2013177615A1 (pt) |
Families Citing this family (40)
Publication number | Priority date | Publication date | Assignee | Title |
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EP2676536A1 (en) | 2012-06-22 | 2013-12-25 | AIT Austrian Institute of Technology GmbH | Method for producing plant seed containing endophytic micro-organisms |
KR20150054944A (ko) | 2012-09-19 | 2015-05-20 | 바이오디스커버리 뉴질랜드 리미티드 | 식물에 유익한 특성을 부여하는 미생물에 대한 스크리닝 방법 |
US9732335B2 (en) | 2012-09-19 | 2017-08-15 | Biodiscovery New Zealand Limited | Methods of screening for microorganisms that impart beneficial properties to plants |
US9777267B2 (en) | 2012-09-19 | 2017-10-03 | Biodiscovery New Zealand Limited | Methods of screening for microorganisms that impart beneficial properties to plants |
BR112015018618B1 (pt) | 2013-02-05 | 2022-08-30 | University Of Saskatchewan | Composição e métodos para melhorar a vitalidade de sementes, a saúde e/ou o rendimento de uma planta |
US10136646B2 (en) | 2013-06-26 | 2018-11-27 | Indigo Ag, Inc. | Agricultural endophyte-plant compositions, and methods of use |
NZ715728A (en) | 2013-06-26 | 2017-04-28 | Indigo Ag Inc | Seed-origin endophyte populations, compositions, and methods of use |
EP3041338B1 (en) | 2013-09-04 | 2019-12-11 | Indigo AG, Inc. | Agricultural endophyte-plant compositions, and methods of use |
CN110506636A (zh) | 2013-11-06 | 2019-11-29 | 德克萨斯A&M大学体系 | 用于提高作物产量和防虫害的真菌内生菌 |
US9364005B2 (en) | 2014-06-26 | 2016-06-14 | Ait Austrian Institute Of Technology Gmbh | Plant-endophyte combinations and uses therefor |
WO2015100432A2 (en) * | 2013-12-24 | 2015-07-02 | Symbiota, Inc. | Method for propagating microorganisms within plant bioreactors and stably storing microorganisms within agricultural seeds |
CA2935218C (en) | 2013-12-24 | 2021-01-26 | Indigo Ag, Inc. | Plants containing beneficial endophytes |
AU2015278238B2 (en) | 2014-06-20 | 2018-04-26 | The Flinders University Of South Australia | Inoculants and methods for use thereof |
EP3161124B1 (en) | 2014-06-26 | 2020-06-03 | Indigo Ag, Inc. | Endophytes, associated compositions, and methods of use thereof |
CA2972904C (en) | 2014-12-30 | 2023-11-14 | Indigo Agriculture, Inc. | Seed endophytes across cultivars and species, associated compositions, and methods of use thereof |
WO2016130586A2 (en) | 2015-02-09 | 2016-08-18 | Bioconsortia, Inc. | Agriculturally beneficial microbes, microbial compositions, and consortia |
AU2016258913B2 (en) | 2015-05-01 | 2019-11-07 | Indigo Ag, Inc. | Designed complex endophyte compositions and methods for improved plant traits |
MX2017013864A (es) | 2015-05-01 | 2018-04-24 | Indigo Agriculture Inc | Composiciones endofitas en complejo aisladas y metodos para mejorar los rasgos de plantas. |
WO2016200987A1 (en) | 2015-06-08 | 2016-12-15 | Indigo Agriculture, Inc. | Streptomyces endophyte compositions and methods for improved agronomic traits in plants |
BR112018005863B1 (pt) * | 2015-09-24 | 2024-02-27 | Agriculture Victoria Services Pty Ltd | Método para isolamento, seleção e/ou caracterização de uma linhagem endofítica |
BR112018012839A2 (pt) | 2015-12-21 | 2018-12-04 | Indigo Ag Inc | composições endofíticas e métodos para melhoramento de traços de plantas em plantas de importância agronômica |
AU2017366699A1 (en) | 2016-12-01 | 2019-07-18 | Indigo Ag, Inc. | Modulated nutritional quality traits in seeds |
MX2019007637A (es) | 2016-12-23 | 2019-12-16 | Texas A & M Univ Sys | Endófitos fúngicos para mejores rendimientos de los cultivos y protección contra las plagas. |
US10645938B2 (en) | 2017-03-01 | 2020-05-12 | Indigo Ag, Inc. | Endophyte compositions and the methods for improvement of plant traits |
EP3589128A1 (en) | 2017-03-01 | 2020-01-08 | Indigo AG, Inc. | Endophyte compositions and methods for improvement of plant traits |
EP3629742A4 (en) | 2017-04-27 | 2022-01-05 | Flinders University Of South Australia | BACTERIAL VACCINE |
US11263707B2 (en) | 2017-08-08 | 2022-03-01 | Indigo Ag, Inc. | Machine learning in agricultural planting, growing, and harvesting contexts |
WO2019055470A1 (en) | 2017-09-12 | 2019-03-21 | Monsanto Technology Llc | PROCESSES FOR THE PREPARATION OF TREATED SEEDS |
EP3684167A2 (en) * | 2017-09-18 | 2020-07-29 | Indigo AG, Inc. | Markers of plant health |
EP3684175A1 (en) | 2017-09-22 | 2020-07-29 | Technische Universität Graz | Polymeric particles containing microorganisms |
EP3758471A1 (en) * | 2018-02-27 | 2021-01-06 | Max-Planck-Gesellschaft zur Förderung der Wissenschaften e.V. | Leaf markers for root colonization by arbuscular mycorrhizal fungi in plants |
MX2021007160A (es) * | 2018-12-20 | 2021-10-13 | Agriculture Victoria Serv Pty | Una semilla de planta artificial y usos de esta. |
CN110771507B (zh) * | 2019-11-26 | 2022-07-01 | 大连大学 | 一种黄芪人工种子制备方法 |
CN112349350B (zh) * | 2020-11-09 | 2022-07-19 | 山西大学 | 基于一种杜氏藻核心基因组序列进行品系鉴定的方法 |
CN114747478B (zh) * | 2021-01-15 | 2023-10-13 | 冯永德 | 一种牧草的复合育种方法 |
CN113965358B (zh) * | 2021-09-28 | 2023-04-28 | 石河子大学 | 综合能源系统网络安全检测方法及系统 |
CN114582427B (zh) * | 2022-03-22 | 2023-04-07 | 成都基因汇科技有限公司 | 一种渐渗区段鉴定方法及计算机可读存储介质 |
CN114874968A (zh) * | 2022-06-21 | 2022-08-09 | 中国林业科学研究院森林生态环境与自然保护研究所 | 对植物内生微生物组的宏基因组进行原位改造的方法 |
CN116606942A (zh) * | 2023-07-19 | 2023-08-18 | 浙江大学海南研究院 | 一种基于液相芯片技术检测畜禽基因组结构变异的方法 |
CN118471344A (zh) * | 2024-05-20 | 2024-08-09 | 迪辅乐生物(上海)有限公司 | 一种菌群互作网络构建、剪裁方法与系统及核心菌群标志物和应用 |
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CN1019445B (zh) | 1985-07-23 | 1992-12-16 | 农业遗传学研究所(有限) | 耐硝酸盐大豆 |
JPH03155722A (ja) * | 1989-11-14 | 1991-07-03 | Kubota Corp | イネ科雑種植物の人工種子及びその製造方法 |
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DK3011828T3 (en) * | 2010-01-07 | 2019-02-18 | Agriculture Victoria Serv Pty | ENDOFTERS AND RELATED PROCEDURES |
-
2013
- 2013-04-09 AU AU2013203272A patent/AU2013203272C1/en active Active
- 2013-05-29 DK DK13796907.7T patent/DK2854514T3/da active
- 2013-05-29 EP EP13796907.7A patent/EP2854514B1/en active Active
- 2013-05-29 US US14/404,861 patent/US10631516B2/en active Active
- 2013-05-29 WO PCT/AU2013/000557 patent/WO2013177615A1/en active Application Filing
- 2013-05-29 CN CN201380041138.XA patent/CN104883875B/zh active Active
- 2013-05-29 NZ NZ630680A patent/NZ630680A/en unknown
- 2013-05-29 CA CA2875119A patent/CA2875119C/en active Active
- 2013-05-29 JP JP2015514286A patent/JP6421115B2/ja active Active
- 2013-05-29 BR BR112014029988-9A patent/BR112014029988B1/pt active IP Right Grant
- 2013-05-30 UY UY0001034836A patent/UY34836A/es active IP Right Grant
- 2013-05-31 AR ARP130101920 patent/AR091228A1/es active IP Right Grant
-
2018
- 2018-10-15 JP JP2018194146A patent/JP2019022516A/ja active Pending
-
2020
- 2020-04-27 US US16/859,368 patent/US20210092933A1/en not_active Abandoned
Also Published As
Publication number | Publication date |
---|---|
JP2015518725A (ja) | 2015-07-06 |
US20210092933A1 (en) | 2021-04-01 |
CN104883875A (zh) | 2015-09-02 |
WO2013177615A8 (en) | 2014-12-18 |
US20150156982A1 (en) | 2015-06-11 |
UY34836A (es) | 2013-12-31 |
US10631516B2 (en) | 2020-04-28 |
WO2013177615A1 (en) | 2013-12-05 |
DK2854514T3 (da) | 2020-05-04 |
NZ630680A (en) | 2019-08-30 |
AU2013203272A1 (en) | 2013-12-19 |
AU2013203272B2 (en) | 2015-09-17 |
CA2875119A1 (en) | 2013-12-05 |
JP6421115B2 (ja) | 2018-11-07 |
BR112014029988B1 (pt) | 2022-06-28 |
CA2875119C (en) | 2023-07-11 |
EP2854514A1 (en) | 2015-04-08 |
EP2854514B1 (en) | 2020-02-12 |
JP2019022516A (ja) | 2019-02-14 |
BR112014029988A8 (pt) | 2021-06-08 |
WO2013177615A9 (en) | 2017-06-29 |
EP2854514A4 (en) | 2016-01-20 |
CN104883875B (zh) | 2020-09-22 |
AR091228A1 (es) | 2015-01-21 |
AU2013203272C1 (en) | 2019-01-17 |
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B06F | Objections, documents and/or translations needed after an examination request according [chapter 6.6 patent gazette] | ||
B06F | Objections, documents and/or translations needed after an examination request according [chapter 6.6 patent gazette] | ||
B06I | Publication of requirement cancelled [chapter 6.9 patent gazette] |
Free format text: ANULADA A PUBLICACAO CODIGO 6.6.1 NA RPI NO 2462 DE 13/03/2018 POR TER SIDO INDEVIDA. |
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B06U | Preliminary requirement: requests with searches performed by other patent offices: procedure suspended [chapter 6.21 patent gazette] | ||
B06A | Patent application procedure suspended [chapter 6.1 patent gazette] | ||
B25G | Requested change of headquarter approved |
Owner name: AGRICULTURE VICTORIA SERVICES PTY LTD (AU) |
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