ATE330008T1 - Methode zur bildung von oligonucleotidbanken welche eine kontrollierte mutationsverteilung aufweisen - Google Patents

Methode zur bildung von oligonucleotidbanken welche eine kontrollierte mutationsverteilung aufweisen

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Publication number
ATE330008T1
ATE330008T1 AT01983959T AT01983959T ATE330008T1 AT E330008 T1 ATE330008 T1 AT E330008T1 AT 01983959 T AT01983959 T AT 01983959T AT 01983959 T AT01983959 T AT 01983959T AT E330008 T1 ATE330008 T1 AT E330008T1
Authority
AT
Austria
Prior art keywords
banks
forming oligonucleotide
libraries
mutation distribution
controlled mutation
Prior art date
Application number
AT01983959T
Other languages
English (en)
Inventor
Robert M Caldwell
Volker Schellenberger
Original Assignee
Genencor Int
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Genencor Int filed Critical Genencor Int
Application granted granted Critical
Publication of ATE330008T1 publication Critical patent/ATE330008T1/de

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    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12NMICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N15/00Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
    • C12N15/09Recombinant DNA-technology
    • C12N15/10Processes for the isolation, preparation or purification of DNA or RNA
    • C12N15/102Mutagenizing nucleic acids
    • C12N15/1031Mutagenizing nucleic acids mutagenesis by gene assembly, e.g. assembly by oligonucleotide extension PCR
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12NMICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N15/00Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
    • C12N15/09Recombinant DNA-technology
    • C12N15/10Processes for the isolation, preparation or purification of DNA or RNA
    • C12N15/102Mutagenizing nucleic acids
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12NMICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N15/00Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
    • C12N15/09Recombinant DNA-technology
    • C12N15/10Processes for the isolation, preparation or purification of DNA or RNA
    • C12N15/102Mutagenizing nucleic acids
    • C12N15/1027Mutagenizing nucleic acids by DNA shuffling, e.g. RSR, STEP, RPR
    • CCHEMISTRY; METALLURGY
    • C40COMBINATORIAL TECHNOLOGY
    • C40BCOMBINATORIAL CHEMISTRY; LIBRARIES, e.g. CHEMICAL LIBRARIES
    • C40B40/00Libraries per se, e.g. arrays, mixtures
AT01983959T 2000-10-26 2001-10-12 Methode zur bildung von oligonucleotidbanken welche eine kontrollierte mutationsverteilung aufweisen ATE330008T1 (de)

Applications Claiming Priority (1)

Application Number Priority Date Filing Date Title
US09/699,250 US6582914B1 (en) 2000-10-26 2000-10-26 Method for generating a library of oligonucleotides comprising a controlled distribution of mutations

Publications (1)

Publication Number Publication Date
ATE330008T1 true ATE330008T1 (de) 2006-07-15

Family

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Family Applications (1)

Application Number Title Priority Date Filing Date
AT01983959T ATE330008T1 (de) 2000-10-26 2001-10-12 Methode zur bildung von oligonucleotidbanken welche eine kontrollierte mutationsverteilung aufweisen

Country Status (8)

Country Link
US (1) US6582914B1 (de)
EP (1) EP1328627B1 (de)
AT (1) ATE330008T1 (de)
AU (1) AU2002215346A1 (de)
CA (1) CA2426774A1 (de)
DE (1) DE60120733T2 (de)
DK (1) DK1328627T3 (de)
WO (1) WO2002034762A2 (de)

Families Citing this family (48)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US5340742A (en) * 1988-09-07 1994-08-23 Omegatech Inc. Process for growing thraustochytrium and schizochytrium using non-chloride salts to produce a microfloral biomass having omega-3-highly unsaturated fatty acids
US6893877B2 (en) 1998-01-12 2005-05-17 Massachusetts Institute Of Technology Methods for screening substances in a microwell array
BR0009164A (pt) 1999-03-19 2001-12-26 Genencor Int Placa de teste de múltiplos furos vazados paraseparação de alto desempenho
US20020151040A1 (en) 2000-02-18 2002-10-17 Matthew O' Keefe Apparatus and methods for parallel processing of microvolume liquid reactions
US20020155439A1 (en) * 2000-12-04 2002-10-24 Ana Rodriguez Method for generating a library of mutant oligonucleotides using the linear cyclic amplification reaction
JP4210769B2 (ja) * 2001-11-22 2009-01-21 独立行政法人産業技術総合研究所 Gatewayエントリークローンの作製方法
US8277753B2 (en) 2002-08-23 2012-10-02 Life Technologies Corporation Microfluidic transfer pin
WO2004074818A2 (en) 2002-12-20 2004-09-02 Biotrove, Inc. Assay apparatus and method using microfluidic arrays
US20050084868A1 (en) * 2003-10-16 2005-04-21 Wolfgang Aehle Generation of stabilized proteins by combinatorial consensus mutagenesis
US7985569B2 (en) 2003-11-19 2011-07-26 Danisco Us Inc. Cellulomonas 69B4 serine protease variants
JP2007529015A (ja) 2004-03-12 2007-10-18 バイオトローブ, インコーポレイテッド ナノリットルのアレイローディング
US20050233336A1 (en) * 2004-04-19 2005-10-20 O'maille Paul E Compositions and methods for producing libraries with controlled compositions and screening probabilities
CA2618699C (en) * 2005-08-11 2012-10-02 J. Craig Venter Institute, Inc. In vitro recombination method
GB2432366B (en) * 2005-11-19 2007-11-21 Alligator Bioscience Ab A method for in vitro molecular evolution of protein function
JP5785686B2 (ja) * 2006-06-23 2015-09-30 ダニスコ・ユーエス・インク、ジェネンコー・ディビジョン 複数の性質をエンジニアリングするための部位評価ライブラリーを用いた、配列と活性との関係の系統的な評価
BRPI0719181A2 (pt) * 2006-10-10 2014-08-05 Danisco Us Inc Genencor Div Variantes de glucoamilase com propriedades alteradas
EP2195423A1 (de) 2007-10-09 2010-06-16 Danisco US Inc. Glucoamylase-varianten mit veränderten eigenschaften
CN101778940B (zh) * 2007-06-06 2017-04-05 丹尼斯科美国公司 改进多种蛋白质性质的方法
US8592194B2 (en) 2007-10-09 2013-11-26 Danisco Us Inc. Glucoamylase variants with altered properties
US8569034B2 (en) 2007-11-01 2013-10-29 Danisco Us Inc. Thermolysin variants and detergent compositions therewith
HUE050328T2 (hu) 2007-11-20 2020-11-30 Danisco Us Inc Glükoamiláz változatok megváltoztatott tulajdonságokkal
SG191671A1 (en) 2007-12-13 2013-07-31 Danisco Us Inc Cultured cells that produce isoprene and methods for producing isoprene
CN107384910A (zh) * 2008-02-15 2017-11-24 合成基因组公司 体外连接和组合装配核酸分子的方法
JP2011518564A (ja) * 2008-04-23 2011-06-30 ダニスコ・ユーエス・インク 改良された微生物によるイソプレン産出用のイソプレンシンターゼ変異体
EP2130918A1 (de) * 2008-06-05 2009-12-09 C-Lecta GmbH Verfahren zur Erzeugung einer Varianten-Bibliothek von DNA-Sequenzen
AU2009256295A1 (en) 2008-06-06 2009-12-10 Danisco Us Inc. Compositions and methods comprising variant microbial proteases
US20090312196A1 (en) * 2008-06-13 2009-12-17 Codexis, Inc. Method of synthesizing polynucleotide variants
US8383346B2 (en) * 2008-06-13 2013-02-26 Codexis, Inc. Combined automated parallel synthesis of polynucleotide variants
RU2011123911A (ru) 2008-11-11 2012-12-20 ДАНИСКО ЮЭс ИНК. Композиции, содержащие варианты сериновых протеаз, и способы
US8753861B2 (en) 2008-11-11 2014-06-17 Danisco Us Inc. Protease comprising one or more combinable mutations
AU2010238770A1 (en) 2009-04-23 2011-11-03 Danisco Us Inc. Three-dimensional structure of isoprene synthase and its use thereof for generating variants
EP2467475A1 (de) 2009-08-19 2012-06-27 Danisco US Inc. Kombinatorische glucoamylasevarianten mit verbesserter spezifischer aktivität und/oder wärmestabilität
CN102575239B (zh) 2009-08-19 2017-06-16 杜邦营养生物科学有限公司 葡糖淀粉酶的变体
US8728790B2 (en) 2009-12-09 2014-05-20 Danisco Us Inc. Compositions and methods comprising protease variants
WO2011130222A2 (en) 2010-04-15 2011-10-20 Danisco Us Inc. Compositions and methods comprising variant proteases
CN105925555B (zh) 2010-05-06 2020-12-22 丹尼斯科美国公司 包含枯草杆菌蛋白酶变体的组合物和方法
WO2012058494A2 (en) 2010-10-27 2012-05-03 Danisco Us Inc. Isoprene synthase variants for improved production of isoprene
EP2705146B1 (de) 2011-05-05 2018-11-07 Danisco US Inc. Zusammensetzungen und verfahren mit serinproteasevarianten
JP5933688B2 (ja) 2011-05-05 2016-06-15 ザ プロクター アンド ギャンブル カンパニー セリンプロテアーゼ変異体を含む組成物及び方法
WO2013092840A1 (en) 2011-12-22 2013-06-27 Dupont Nutrition Biosciences Aps Polypeptides having glucoamylase activity and method of producing the same
US9163263B2 (en) 2012-05-02 2015-10-20 The Goodyear Tire & Rubber Company Identification of isoprene synthase variants with improved properties for the production of isoprene
MX2015002099A (es) 2012-08-22 2015-05-11 Dupont Nutrition Biosci Aps Variantes que tienen actividad glucoamilasa.
KR20150082502A (ko) 2012-11-05 2015-07-15 다니스코 유에스 인크. 써몰리신 프로테아제 변이체를 포함하는 조성물 및 방법
US20140243356A1 (en) 2013-02-07 2014-08-28 The Regents Of The University Of California Use of translational profiling to identify target molecules for therapeutic treatment
EP3653707A1 (de) 2013-09-12 2020-05-20 Danisco US Inc. Zusammensetzungen und verfahren mit lg12-klade-protease-varianten
CN113584015A (zh) 2014-08-27 2021-11-02 新英格兰生物实验室公司 合成子的形成
US9963687B2 (en) 2014-08-27 2018-05-08 New England Biolabs, Inc. Fusion polymerase and method for using the same
US20180112204A1 (en) 2015-05-13 2018-04-26 Danisco Us Inc. AprL-CLADE PROTEASE VARIANTS AND USES THEREOF

Family Cites Families (21)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
ATE93541T1 (de) 1985-07-03 1993-09-15 Genencor Int Hybride polypeptide und verfahren zu deren herstellung.
IL79881A (en) 1985-08-28 1995-12-08 Pieczenik George Populations of random coding series of oligonucleotides and peptides
US5556747A (en) * 1990-07-09 1996-09-17 E. R. Squibb & Sons, Inc. Method for site-directed mutagenesis
WO1992002536A1 (en) * 1990-08-02 1992-02-20 The Regents Of The University Of Colorado Systematic polypeptide evolution by reverse translation
GB9027836D0 (en) 1990-12-21 1991-02-13 Unilever Plc Enzymes and enzymatic detergent compositions
US5270170A (en) 1991-10-16 1993-12-14 Affymax Technologies N.V. Peptide library and screening method
US5521077A (en) 1994-04-28 1996-05-28 The Leland Stanford Junior University Method of generating multiple protein variants and populations of protein variants prepared thereby
CN1128875C (zh) 1995-08-11 2003-11-26 诺沃奇梅兹有限公司 制备多肽变异体的方法
GB9521788D0 (en) 1995-10-24 1996-01-03 Univ Leeds DNA repair
US5830696A (en) 1996-12-05 1998-11-03 Diversa Corporation Directed evolution of thermophilic enzymes
US6242222B1 (en) 1996-06-07 2001-06-05 Massachusetts Institute Of Technology Programmed sequential mutagenesis
JPH1066576A (ja) 1996-08-07 1998-03-10 Novo Nordisk As 突出末端を有する2本鎖dna及びこれを用いたdnaのシャフリング方法
FR2753202A1 (fr) 1996-09-06 1998-03-13 Agronomique Inst Nat Rech Bacteries multiresistantes, procedes d'obtention et utilisation
US6046036A (en) 1996-10-25 2000-04-04 Advanced Research And Technology Institute DNA sequences encoding fusions of DNA repair proteins and uses thereof
CN1208456C (zh) 1996-12-20 2005-06-29 诺维信公司 体内重组
CA2284097A1 (en) 1997-03-18 1998-09-24 Novo Nordisk A/S Shuffling of heterologous dna sequences
EP0996718B1 (de) 1997-03-18 2008-12-24 Novozymes A/S Methode zur herstellung einer bibliothek mittels dna-shuffling
CN1249784A (zh) 1997-03-18 2000-04-05 诺沃挪第克公司 一种体外构建dna文库的方法
US6153410A (en) 1997-03-25 2000-11-28 California Institute Of Technology Recombination of polynucleotide sequences using random or defined primers
CA2290074A1 (en) 1997-05-12 1998-11-19 Thermogen, Inc. Method for the stabilization of proteins and the thermostabilized alcohol dehydrogenases produced thereby
US6251604B1 (en) * 1999-08-13 2001-06-26 Genopsys, Inc. Random mutagenesis and amplification of nucleic acid

Also Published As

Publication number Publication date
DE60120733T2 (de) 2007-06-14
US6582914B1 (en) 2003-06-24
EP1328627A2 (de) 2003-07-23
WO2002034762A2 (en) 2002-05-02
AU2002215346A1 (en) 2002-05-06
WO2002034762A3 (en) 2003-03-13
CA2426774A1 (en) 2002-05-02
EP1328627B1 (de) 2006-06-14
DE60120733D1 (de) 2006-07-27
DK1328627T3 (da) 2006-10-23

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