AU2002215346A1 - Method for generating a library of oligonucleotides comprising a controlled distribution of mutations - Google Patents
Method for generating a library of oligonucleotides comprising a controlled distribution of mutationsInfo
- Publication number
- AU2002215346A1 AU2002215346A1 AU2002215346A AU1534602A AU2002215346A1 AU 2002215346 A1 AU2002215346 A1 AU 2002215346A1 AU 2002215346 A AU2002215346 A AU 2002215346A AU 1534602 A AU1534602 A AU 1534602A AU 2002215346 A1 AU2002215346 A1 AU 2002215346A1
- Authority
- AU
- Australia
- Prior art keywords
- oligonucleotides
- mutations
- library
- generating
- libraries
- Prior art date
- Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
- Abandoned
Links
Classifications
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
- C12N15/00—Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
- C12N15/09—Recombinant DNA-technology
- C12N15/10—Processes for the isolation, preparation or purification of DNA or RNA
- C12N15/102—Mutagenizing nucleic acids
- C12N15/1031—Mutagenizing nucleic acids mutagenesis by gene assembly, e.g. assembly by oligonucleotide extension PCR
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
- C12N15/00—Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
- C12N15/09—Recombinant DNA-technology
- C12N15/10—Processes for the isolation, preparation or purification of DNA or RNA
- C12N15/102—Mutagenizing nucleic acids
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
- C12N15/00—Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
- C12N15/09—Recombinant DNA-technology
- C12N15/10—Processes for the isolation, preparation or purification of DNA or RNA
- C12N15/102—Mutagenizing nucleic acids
- C12N15/1027—Mutagenizing nucleic acids by DNA shuffling, e.g. RSR, STEP, RPR
-
- C—CHEMISTRY; METALLURGY
- C40—COMBINATORIAL TECHNOLOGY
- C40B—COMBINATORIAL CHEMISTRY; LIBRARIES, e.g. CHEMICAL LIBRARIES
- C40B40/00—Libraries per se, e.g. arrays, mixtures
Landscapes
- Genetics & Genomics (AREA)
- Health & Medical Sciences (AREA)
- Life Sciences & Earth Sciences (AREA)
- Chemical & Material Sciences (AREA)
- Engineering & Computer Science (AREA)
- General Engineering & Computer Science (AREA)
- Bioinformatics & Cheminformatics (AREA)
- Biomedical Technology (AREA)
- Organic Chemistry (AREA)
- Biotechnology (AREA)
- Zoology (AREA)
- Wood Science & Technology (AREA)
- Microbiology (AREA)
- Plant Pathology (AREA)
- Physics & Mathematics (AREA)
- Molecular Biology (AREA)
- Crystallography & Structural Chemistry (AREA)
- Biochemistry (AREA)
- General Health & Medical Sciences (AREA)
- Biophysics (AREA)
- Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
- Saccharide Compounds (AREA)
- Preparation Of Compounds By Using Micro-Organisms (AREA)
Applications Claiming Priority (3)
Application Number | Priority Date | Filing Date | Title |
---|---|---|---|
US09/699,250 | 2000-10-26 | ||
US09/699,250 US6582914B1 (en) | 2000-10-26 | 2000-10-26 | Method for generating a library of oligonucleotides comprising a controlled distribution of mutations |
PCT/US2001/032046 WO2002034762A2 (en) | 2000-10-26 | 2001-10-12 | Method for generating a library of oligonucleotides comprising a controlled distribution of mutations |
Publications (1)
Publication Number | Publication Date |
---|---|
AU2002215346A1 true AU2002215346A1 (en) | 2002-05-06 |
Family
ID=24808514
Family Applications (1)
Application Number | Title | Priority Date | Filing Date |
---|---|---|---|
AU2002215346A Abandoned AU2002215346A1 (en) | 2000-10-26 | 2001-10-12 | Method for generating a library of oligonucleotides comprising a controlled distribution of mutations |
Country Status (8)
Country | Link |
---|---|
US (1) | US6582914B1 (de) |
EP (1) | EP1328627B1 (de) |
AT (1) | ATE330008T1 (de) |
AU (1) | AU2002215346A1 (de) |
CA (1) | CA2426774A1 (de) |
DE (1) | DE60120733T2 (de) |
DK (1) | DK1328627T3 (de) |
WO (1) | WO2002034762A2 (de) |
Families Citing this family (48)
Publication number | Priority date | Publication date | Assignee | Title |
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US5340742A (en) * | 1988-09-07 | 1994-08-23 | Omegatech Inc. | Process for growing thraustochytrium and schizochytrium using non-chloride salts to produce a microfloral biomass having omega-3-highly unsaturated fatty acids |
US6893877B2 (en) | 1998-01-12 | 2005-05-17 | Massachusetts Institute Of Technology | Methods for screening substances in a microwell array |
WO2000056456A1 (en) | 1999-03-19 | 2000-09-28 | Genencor International, Inc. | Multi-through hole testing plate for high throughput screening |
US20020151040A1 (en) | 2000-02-18 | 2002-10-17 | Matthew O' Keefe | Apparatus and methods for parallel processing of microvolume liquid reactions |
US20020155439A1 (en) * | 2000-12-04 | 2002-10-24 | Ana Rodriguez | Method for generating a library of mutant oligonucleotides using the linear cyclic amplification reaction |
JP4210769B2 (ja) * | 2001-11-22 | 2009-01-21 | 独立行政法人産業技術総合研究所 | Gatewayエントリークローンの作製方法 |
US8277753B2 (en) | 2002-08-23 | 2012-10-02 | Life Technologies Corporation | Microfluidic transfer pin |
WO2004074818A2 (en) | 2002-12-20 | 2004-09-02 | Biotrove, Inc. | Assay apparatus and method using microfluidic arrays |
US20050084868A1 (en) * | 2003-10-16 | 2005-04-21 | Wolfgang Aehle | Generation of stabilized proteins by combinatorial consensus mutagenesis |
US7985569B2 (en) | 2003-11-19 | 2011-07-26 | Danisco Us Inc. | Cellulomonas 69B4 serine protease variants |
EP1735097B1 (de) | 2004-03-12 | 2016-11-30 | Life Technologies Corporation | Ladung eines nanoliter-arrays |
US20050233336A1 (en) * | 2004-04-19 | 2005-10-20 | O'maille Paul E | Compositions and methods for producing libraries with controlled compositions and screening probabilities |
CA2618699C (en) | 2005-08-11 | 2012-10-02 | J. Craig Venter Institute, Inc. | In vitro recombination method |
GB2432366B (en) * | 2005-11-19 | 2007-11-21 | Alligator Bioscience Ab | A method for in vitro molecular evolution of protein function |
KR101486087B1 (ko) * | 2006-06-23 | 2015-01-26 | 다니스코 유에스 인크. | 다수의 특성들을 조작하는 부위 평가 라이브러리를 사용한 서열 및 활성 관계에 대한 체계적 평가 |
CA2665595A1 (en) * | 2006-10-10 | 2008-04-17 | Danisco Us, Inc., Genencor Division | Glucoamylase variants with altered properties |
BRPI0812206A2 (pt) * | 2007-06-06 | 2014-10-14 | Danisco Us Inc Genencor Div | Métodos para melhorar o desempenho de proteínas |
US8592194B2 (en) | 2007-10-09 | 2013-11-26 | Danisco Us Inc. | Glucoamylase variants with altered properties |
ES2504983T3 (es) | 2007-10-09 | 2014-10-09 | Danisco Us Inc. | Variantes de glucoamilasa |
CN101868538B (zh) | 2007-11-01 | 2013-07-10 | 丹尼斯科美国公司 | 嗜热菌蛋白酶及其变体的生产和在液体洗涤剂中的用途 |
HUE050328T2 (hu) | 2007-11-20 | 2020-11-30 | Danisco Us Inc | Glükoamiláz változatok megváltoztatott tulajdonságokkal |
RU2545699C2 (ru) | 2007-12-13 | 2015-04-10 | ДАНИСКО ЮЭс ИНК. | Композиции и способы получения изопрена |
EP3064599B1 (de) * | 2008-02-15 | 2018-12-12 | Synthetic Genomics, Inc. | Verfahren zur in-vitro-verbindung und zur kombinatorischen anordnung von nukleinsäuremolekülen |
AU2009240505B2 (en) * | 2008-04-23 | 2013-09-05 | Danisco Us Inc. | Isoprene synthase variants for improved microbial production of isoprene |
EP2130918A1 (de) | 2008-06-05 | 2009-12-09 | C-Lecta GmbH | Verfahren zur Erzeugung einer Varianten-Bibliothek von DNA-Sequenzen |
CN104130993B (zh) | 2008-06-06 | 2018-10-23 | 丹尼斯科美国公司 | 包括微生物蛋白酶变体的组合物和方法 |
US20090312196A1 (en) * | 2008-06-13 | 2009-12-17 | Codexis, Inc. | Method of synthesizing polynucleotide variants |
US8383346B2 (en) * | 2008-06-13 | 2013-02-26 | Codexis, Inc. | Combined automated parallel synthesis of polynucleotide variants |
WO2010056653A2 (en) | 2008-11-11 | 2010-05-20 | Danisco Us Inc. | Proteases comprising one or more combinable mutations |
CA2743047A1 (en) * | 2008-11-11 | 2010-05-20 | Danisco Us Inc. | Compositions and methods comprising serine protease variants |
US8518686B2 (en) * | 2009-04-23 | 2013-08-27 | Danisco Us Inc. | Three-dimensional structure of isoprene synthase and its use thereof for generating variants |
CA2770607C (en) | 2009-08-19 | 2019-02-26 | Danisco A/S | Variants of glucoamylase |
US20120164695A1 (en) | 2009-08-19 | 2012-06-28 | Danisco Us Inc. | Combinatorial variants of glucoamylase with improved specific activity and/or thermostability |
MX338884B (es) | 2009-12-09 | 2016-05-04 | Danisco Us Inc | Composiciones y metodos que comprenden variantes de proteasa. |
CN102858970B (zh) | 2010-04-15 | 2017-07-21 | 丹尼斯科美国公司 | 包含变体蛋白酶的组合物和方法 |
DK3095861T3 (da) | 2010-05-06 | 2019-09-23 | Procter & Gamble | Forbrugerprodukter med proteasevarianter |
SG190043A1 (en) | 2010-10-27 | 2013-06-28 | Danisco Us Inc | Isoprene synthase variants for improved production of isoprene |
MX338925B (es) | 2011-05-05 | 2016-05-06 | Procter & Gamble | Composiciones y metodos que comprenden variantes de proteasa serina. |
RU2663114C2 (ru) | 2011-05-05 | 2018-08-01 | Дзе Проктер Энд Гэмбл Компани | Способы и композиции, содержащие варианты сериновой протеазы |
DK2794641T3 (en) | 2011-12-22 | 2017-03-13 | Dupont Nutrition Biosci Aps | POLYPEPTIDES WITH GLUCOAMYLASE ACTIVITY AND PROCEDURES FOR PREPARING IT |
US9163263B2 (en) | 2012-05-02 | 2015-10-20 | The Goodyear Tire & Rubber Company | Identification of isoprene synthase variants with improved properties for the production of isoprene |
MX2015002099A (es) | 2012-08-22 | 2015-05-11 | Dupont Nutrition Biosci Aps | Variantes que tienen actividad glucoamilasa. |
MX2015005577A (es) | 2012-11-05 | 2015-07-23 | Danisco Inc | Composiciones y metodos que comprenden variantes de proteasa termolisina. |
WO2014124339A2 (en) | 2013-02-07 | 2014-08-14 | The Regents Of The University Of California | Use of translational profiling to identify target molecules for therapeutic treatment |
CN105593365B (zh) | 2013-09-12 | 2021-08-27 | 丹尼斯科美国公司 | 包含lg12-进化枝蛋白酶变体的组合物和方法 |
US9963687B2 (en) | 2014-08-27 | 2018-05-08 | New England Biolabs, Inc. | Fusion polymerase and method for using the same |
EP3778891A1 (de) | 2014-08-27 | 2021-02-17 | New England Biolabs, Inc. | Synthonbildung |
EP4219704A3 (de) | 2015-05-13 | 2023-08-23 | Danisco US Inc | Aprl-clade-proteasevarianten und verwendungen davon |
Family Cites Families (21)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
DE3688920T4 (de) | 1985-07-03 | 1995-08-31 | Genencor Int | Hybride Polypeptide und Verfahren zu deren Herstellung. |
ATE165363T1 (de) | 1985-08-28 | 1998-05-15 | George Pieczenik | Verfahren und mittel zur sortierung und bestimmung biologischer informationen |
US5556747A (en) * | 1990-07-09 | 1996-09-17 | E. R. Squibb & Sons, Inc. | Method for site-directed mutagenesis |
WO1992002536A1 (en) * | 1990-08-02 | 1992-02-20 | The Regents Of The University Of Colorado | Systematic polypeptide evolution by reverse translation |
GB9027836D0 (en) | 1990-12-21 | 1991-02-13 | Unilever Plc | Enzymes and enzymatic detergent compositions |
US5270170A (en) | 1991-10-16 | 1993-12-14 | Affymax Technologies N.V. | Peptide library and screening method |
US5521077A (en) | 1994-04-28 | 1996-05-28 | The Leland Stanford Junior University | Method of generating multiple protein variants and populations of protein variants prepared thereby |
EP0843725B1 (de) | 1995-08-11 | 2002-04-17 | Novozymes A/S | Verfahren zur herstellung von polypeptidabkömmlingen |
GB9521788D0 (en) | 1995-10-24 | 1996-01-03 | Univ Leeds | DNA repair |
US5830696A (en) | 1996-12-05 | 1998-11-03 | Diversa Corporation | Directed evolution of thermophilic enzymes |
US6242222B1 (en) | 1996-06-07 | 2001-06-05 | Massachusetts Institute Of Technology | Programmed sequential mutagenesis |
JPH1066576A (ja) | 1996-08-07 | 1998-03-10 | Novo Nordisk As | 突出末端を有する2本鎖dna及びこれを用いたdnaのシャフリング方法 |
FR2753202A1 (fr) | 1996-09-06 | 1998-03-13 | Agronomique Inst Nat Rech | Bacteries multiresistantes, procedes d'obtention et utilisation |
US6046036A (en) | 1996-10-25 | 2000-04-04 | Advanced Research And Technology Institute | DNA sequences encoding fusions of DNA repair proteins and uses thereof |
WO1998028416A1 (en) | 1996-12-20 | 1998-07-02 | Novo Nordisk A/S | In vivo recombination |
DE69840382D1 (de) | 1997-03-18 | 2009-02-05 | Novozymes As | Methode zur herstellung einer bibliothek mittels dna-shuffling |
ATE399880T1 (de) | 1997-03-18 | 2008-07-15 | Novozymes As | Ein in-vitro-verfahren zur herstellung einer dna- bibliothek |
CA2284097A1 (en) | 1997-03-18 | 1998-09-24 | Novo Nordisk A/S | Shuffling of heterologous dna sequences |
US6153410A (en) | 1997-03-25 | 2000-11-28 | California Institute Of Technology | Recombination of polynucleotide sequences using random or defined primers |
CA2290074A1 (en) | 1997-05-12 | 1998-11-19 | Thermogen, Inc. | Method for the stabilization of proteins and the thermostabilized alcohol dehydrogenases produced thereby |
US6251604B1 (en) * | 1999-08-13 | 2001-06-26 | Genopsys, Inc. | Random mutagenesis and amplification of nucleic acid |
-
2000
- 2000-10-26 US US09/699,250 patent/US6582914B1/en not_active Expired - Lifetime
-
2001
- 2001-10-12 AU AU2002215346A patent/AU2002215346A1/en not_active Abandoned
- 2001-10-12 AT AT01983959T patent/ATE330008T1/de not_active IP Right Cessation
- 2001-10-12 CA CA002426774A patent/CA2426774A1/en not_active Abandoned
- 2001-10-12 DE DE60120733T patent/DE60120733T2/de not_active Expired - Lifetime
- 2001-10-12 EP EP01983959A patent/EP1328627B1/de not_active Expired - Lifetime
- 2001-10-12 DK DK01983959T patent/DK1328627T3/da active
- 2001-10-12 WO PCT/US2001/032046 patent/WO2002034762A2/en active IP Right Grant
Also Published As
Publication number | Publication date |
---|---|
DK1328627T3 (da) | 2006-10-23 |
CA2426774A1 (en) | 2002-05-02 |
DE60120733T2 (de) | 2007-06-14 |
EP1328627A2 (de) | 2003-07-23 |
DE60120733D1 (de) | 2006-07-27 |
WO2002034762A3 (en) | 2003-03-13 |
EP1328627B1 (de) | 2006-06-14 |
US6582914B1 (en) | 2003-06-24 |
WO2002034762A2 (en) | 2002-05-02 |
ATE330008T1 (de) | 2006-07-15 |
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