WO2021109297A1 - 一种依特卡肽中间体及依特卡肽的合成方法 - Google Patents
一种依特卡肽中间体及依特卡肽的合成方法 Download PDFInfo
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- C07C323/57—Thiols, sulfides, hydropolysulfides or polysulfides substituted by halogen, oxygen or nitrogen atoms, or by sulfur atoms not being part of thio groups containing thio groups and carboxyl groups bound to the same carbon skeleton having the sulfur atoms of the thio groups bound to acyclic carbon atoms of the carbon skeleton the carbon skeleton being further substituted by nitrogen atoms, not being part of nitro or nitroso groups
- C07C323/58—Thiols, sulfides, hydropolysulfides or polysulfides substituted by halogen, oxygen or nitrogen atoms, or by sulfur atoms not being part of thio groups containing thio groups and carboxyl groups bound to the same carbon skeleton having the sulfur atoms of the thio groups bound to acyclic carbon atoms of the carbon skeleton the carbon skeleton being further substituted by nitrogen atoms, not being part of nitro or nitroso groups with amino groups bound to the carbon skeleton
- C07C323/59—Thiols, sulfides, hydropolysulfides or polysulfides substituted by halogen, oxygen or nitrogen atoms, or by sulfur atoms not being part of thio groups containing thio groups and carboxyl groups bound to the same carbon skeleton having the sulfur atoms of the thio groups bound to acyclic carbon atoms of the carbon skeleton the carbon skeleton being further substituted by nitrogen atoms, not being part of nitro or nitroso groups with amino groups bound to the carbon skeleton with acylated amino groups bound to the carbon skeleton
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Definitions
- the present invention relates to the technical field of chemical synthesis, in particular, to a synthetic method of etecartide intermediates and etecartide.
- Etecartide is a novel calcimimetic developed by Kai Pharmaceuticals, Inc., which can inhibit the secretion of parathyroid hormone. Etecartide can bind to and activate the calcium-sensitive receptors on the parathyroid glands to reduce the level of parathyroid hormone.
- Etecartide has 3 D-configuration arginines, 2 D-configuration alanines, 1 D-configuration arginine amide, 1 L-configuration cysteine and 1 D-configuration Cysteine (the N-terminus is blocked by an acetyl group) is composed of cysteine in the D configuration and the cysteine in the L configuration by a disulfide bond (N-acetyl-D-cysteinyl-D-alanyl- D-arginyl-D-arginyl-D-arginyl-D-alanyl-D-Argininamide, disulfide with L-cysteine).
- Patent 2017/114238 A1 The liquid phase synthesis method adopted, the route is longer, and the total yield is only 11%; Patent WO 2017/114240 A1: According to the patent, the purity of the crude peptide is 81.0%, and there are many impurities. The total yield after purification The rate is 30.5%; Patent US 2019/0100554 A1: According to the patent, the purity of the crude peptide is low and requires multiple purifications, and the total yield is 50%; in the Chinese patent CN201811277081, the purity of the crude peptide is 88.2%, and the total yield after purification is 57.8%. In other words, the current solid-phase synthesis of 7 peptides connected to cysteine and derivatives has problems such as low purity of crude peptides, many impurities, and difficulty in purification.
- the present invention aims to provide an etecartide intermediate and a method for synthesizing itecartide.
- the intermediate is used to synthesize itecartide, so as to solve the technical problem of complex synthesis steps of etecartide in the prior art.
- a method for synthesizing an intermediate of etacatide is provided.
- the etercartide intermediate is Fmoc-D-Cys(S-S-(N-Boc)-L-Cys(OtBu))-OH, and its structural formula I is shown in:
- the synthetic method of etacatide intermediate includes the following steps: starting with N-Boc-L-Cys-OtBu, the primary product is generated through substitution reaction Wherein, R is S-Py or Cl, and the primary product is coupled with Fmoc-D-Cys-OH amino acid to obtain Fmoc-D-Cys(SS-(N-Boc)-L-Cys(OtBu))-OH.
- the primary product is Py-SS-(N-Boc)-L-Cys-OtBu
- Fmoc-D-Cys(SS-(N-Boc)-L-Cys(OtBu))-OH is prepared by the following steps :
- the primary product Py-SS-(N-Boc)-L-Cys-OtBu was synthesized by substitution reaction of N-Boc-L-Cys-OtBu and disulfide dipyridine; and Py-SS-(N-Boc)- L-Cys-OtBu is coupled with Fmoc-D-Cys-OH to obtain Fmoc-D-Cys-(SS-(N-Boc)-L-Cys-OtBu)-OH.
- Fmoc-D-Cys(SS-(N-Boc)-L-Cys(OtBu))-OH was prepared by the following steps: at room temperature, N-Boc-L-Cys-OtBu and dithiodipyridine Add to solvent A, stir for 6-12h, then add water, extract with extractant, dry and filter the obtained organic phase, and obtain Py-SS-(N-Boc)-L-Cys-OtBu after purification; solvent B Fmoc-D-Cys-OH and Py-SS-(N-Boc)-L-Cys-OtBu were added to the mixture, the temperature was controlled at 15 ⁇ 30°C, and the reaction was stirred for 0.5 ⁇ 2h.
- reaction system was washed, concentrated and purified to obtain Fmoc- D-Cys(SS-(N-Boc)-L-Cys(OtBu))-OH; preferably, solvent A is selected from one or more of DMF, NMP and DMAc; preferably, the extractant is selected from EtOAc One or more of MTBE and DCM; preferably, solvent B is selected from one or more of DCM, DMF, THF, NMP and DMAc.
- the molar ratio of N-Boc-L-Cys-OtBu to dithiodipyridine is 1:1.2 to 1:6.4; N-Boc- The concentration of L-Cys-OtBu in solvent A is 0.01 ⁇ 0.3g/mL; the concentration of Fmoc-D-Cys-OH in solvent B is 0.01 ⁇ 0.3g/mL; Fmoc-D-Cys-OH and Py-SS The molar ratio of -(N-Boc)-L-Cys-OtBu is 1:0.8 to 1.4.
- the primary product is (N-Boc)-L-Cys(S-Cl)-OtBu
- Fmoc-D-Cys(SS-(N-Boc)-L-Cys(OtBu))-OH is prepared by the following steps Obtained: (N-Boc)-L-Cys(S-Cl)-OtBu was synthesized by reacting N-Boc-L-Cys-OtBu with NCS; and (N-Boc)-L-Cys(S-Cl)- OtBu reacts with Fmoc-D-Cys-OH to obtain Fmoc-D-Cys(SS-(N-Boc)-L-Cys(OtBu))-OH.
- Fmoc-D-Cys(SS-(N-Boc)-L-Cys(OtBu))-OH was prepared by the following steps: A. Dissolving N-Boc-L-Cys-OtBu in solvent C, Control the temperature at 0 ⁇ 10°C, add DIPEA, add NCS in batches, stir for 4 ⁇ 5h, after the reaction, filter and rinse to obtain the filtrate; B.
- the solvent C is selected from one or more of DCM, THF, DMF NMP and DMAc.
- step A N-Boc-L-Cys-OtBu is dissolved in solvent C to obtain a solution with a concentration of 0.01 to 0.3 g/mL, the amount of DIPEA added is 2 to 3 eq of moles, and the amount of NCS added is 1.1 ⁇ 1.5eq;
- step B the amount of Fmoc-D-Cys-OH added is 1.1 ⁇ 1.5eq.
- a method for synthesizing etacatide includes the following steps: S1, the synthesis method of any one of the above-mentioned etacitide intermediates to synthesize Fmoc-D-Cys(SS-(N-Boc)-L-Cys(OtBu))-OH; and S2 , Combine NH 2 -D-Ala-D-Arg-D-Arg-D-Arg-D-Ala-D-Arg with Fmoc-D-Cys(SS-(N-Boc)-L-Cys(OtBu)) -OH reaction, then remove Fmoc, and then undergo acetylation to obtain etecatide.
- NH 2 -D-Ala-D-Arg-D-Arg-D-Arg-D-Ala-D-Arg is NH 2 -D-Ala-D-Arg-D-Arg-D- Arg-D-Ala-D-Arg-resin hexapeptide.
- S2 includes: using amino resin to link NH 2 -D-Ala-D-Arg-D-Arg-D-Arg-D-Ala-D-Arg-resin hexapeptide according to the method of solid phase synthesis, and Fmoc- D-Cys(SS-(N-Boc)-L-Cys(OtBu))-OH, PyBop and DIPEA are activated at 0 ⁇ 5°C for 0-10min, and the temperature is controlled at 20 ⁇ 30°C to react for 2 ⁇ 6h. After the reaction, use DMF was washed 4-6 times, 10%-20% piperidine was removed from Fmoc, and then acetylated to obtain the peptide resin of etercartide.
- Figure 1 shows the purity profile of Fmoc-D-Cys(S-S-(N-Boc)-L-Cys(OtBu))-OH in Example 1;
- FIG. 3 shows the purity profile of itercatide after preparation and purification in Example 3.
- Fmoc 9-fluorenylmethoxycarbonyl.
- Boc tert-butylcarbonyl.
- Cys Cysteine
- PyBop benzotriazol-1-yl-oxytripyrrolidinyl phosphorus hexafluorophosphate.
- DIPEA N,N-diisopropylethylamine.
- NCS N-chlorosuccinimide
- NMP N-methylpyrrolidone
- DMAc N,N-dimethylacetamide.
- THF Tetrahydrofuran
- the etecartide intermediate is Fmoc-D-Cys(SS-(N-Boc)-L-Cys(OtBu) )-OH
- the synthetic method of etacitide intermediate includes the following steps: take N-Boc-L-Cys-OtBu as the starting material and generate the primary product through substitution reaction Wherein, R is S-Py or Cl, and the primary product is coupled with Fmoc-D-Cys-OH amino acid to obtain Fmoc-D-Cys(SS-(N-Boc)-L-Cys(OtBu))-OH.
- the primary product is Py-SS-(N-Boc)-L-Cys-OtBu
- Fmoc-D-Cys(SS-(N-Boc)-L-Cys(OtBu)) -OH is prepared by the following steps: Py-SS-(N-Boc)-L-Cys-OtBu is synthesized by reacting N-Boc-L-Cys-OtBu with dithiodipyridine; and Py-SS-(N -Boc)-L-Cys-OtBu is coupled with Fmoc-D-Cys-OH to obtain Fmoc-D-Cys-(SS-(N-Boc)-L-Cys(OtBu))-OH.
- synthetic The raw material of this intermediate is cheap and easy to obtain, and the process is simple.
- Fmoc-D-Cys(SS-(N-Boc)-L-Cys(OtBu))-OH is prepared by the following steps: at room temperature, (N-Boc)-L-Cys-OtBu and disulfide Dipyridine was added to solvent A, stirred for 6-12 hours, then added water, extracted with extractant, dried and filtered the obtained organic phase, and purified to obtain Py-SS-(N-Boc)-L-Cys-OtBu; Add Fmoc-D-Cys-OH and Py-SS-(N-Boc)-L-Cys-OtBu to solvent B, control the temperature at 15 ⁇ 30°C, stir and react for 0.5 ⁇ 2h, wash the reaction system with water, concentrate and purify it Fmoc-D-Cys(SS-(N-Boc)-L-Cys(OtBu))-OH.
- the solvent A is selected from one or more of DMF, NMP and DMAc; preferably, the extraction agent is selected from one or more of EtOAc, MTBE and DCM; preferably, the solvent B is selected from DCM , DMF, THF, NMP and DMAc one or more.
- the combination of N-Boc-L-Cys-OtBu and dithiodipyridine In order to improve the utilization of raw materials and ensure the rapid and effective progress of the reaction, it is further preferred that in the reaction between N-Boc-L-Cys-OtBu and dithiodipyridine, the combination of N-Boc-L-Cys-OtBu and dithiodipyridine
- the molar ratio is 1:1.2 ⁇ 1:6.4, the concentration of (N-Boc)-L-Cys-OtBu in solvent A is 0.01 ⁇ 0.3g/mL; the concentration of Fmoc-D-Cys-OH in solvent B is 0.01 ⁇ 0.3g/mL; the molar ratio of Fmoc-D-Cys-OH to Py-SS-(N-Boc)-L-Cys-OtBu is 1:0.8 ⁇ 1.4.
- the primary product is (N-Boc)-L-Cys(S-Cl)-OtBu
- Fmoc-D-Cys(SS-(N-Boc)-L-Cys(OtBu) )-OH is prepared by the following steps: (N-Boc)-L-Cys(S-Cl)-OtBu is synthesized by reacting N-Boc-L-Cys-OtBu with NCS; and (N-Boc)-L- Cys(S-Cl)-OtBu reacts with Fmoc-D-Cys-OH to obtain Fmoc-D-Cys-(SS-(N-Boc)-L-Cys(OtBu))-OH.
- Fmoc-D-Cys(SS-(N-Boc)-L-Cys(OtBu))-OH is prepared by the following steps: A. Dissolving (N-Boc)-Cys-OtBu in solvent C, Control the temperature at 0 ⁇ 10°C, add DIPEA, add NCS in batches, stir for 4 ⁇ 5h, after the reaction, filter and rinse to obtain the filtrate; B.
- the solvent C is selected from one or more of DCM, THF, DMF NMP and DMAc.
- step A (N-Boc)-L-Cys-OtBu is dissolved in solvent C to obtain a solution with a concentration of 0.01 to 0.3 g/mL,
- the added amount of DIPEA is 2 to 3 eq of moles, and the added amount of NCS is 1.1 to 1.5 eq;
- step B the added amount of Fmoc-D-Cys-OH is 1.1 to 1.5 eq.
- a method for synthesizing etacatide includes the following steps: S1, Fmoc-D-Cys(SS-(N-Boc)-L-Cys(OtBu))-OH is synthesized according to the synthesis method of any of the aforementioned etka peptide intermediates; and S2 , Combine NH 2 -D-Ala-D-Arg-D-Arg-D-Arg-D-Ala-D-Arg with the Fmoc-D-Cys(SS-(N-Boc)-L-Cys(OtBu )) -OH reaction, and then remove Fmoc, and then undergo acetylation to obtain etercartide.
- NH 2 -D-Ala-D-Arg-D-Arg-D-Arg-D-Ala-D-Arg is NH 2 -D-Ala-D-Arg-D-Arg-D- Arg-D-Ala-D-Arg-resin hexapeptide.
- S2 includes: using amino resin to link NH 2 -D-Ala-D-Arg-D-Arg-D-Arg-D-Ala-D-Arg-resin hexapeptide according to the method of solid phase synthesis, and Fmoc- D-Cys(SS-(N-Boc)-L-Cys(OtBu))-OH, PyBop and DIPEA are activated at 0 ⁇ 10°C for 0-10min, and the temperature is controlled at 20 ⁇ 30°C to react for 2 ⁇ 6h.
- N-Boc-L-Cys-OtBu(Cpd 1) was synthesized by reaction with disulfide dipyridine; Py-SS- (N-Boc)-L-Cys-OtBu(Cpd 2a) is coupled with Fmoc-D-Cys-OH to obtain Fmoc-D-Cys-(SS-(N-Boc)-L-Cys-OtBu)-OH( Cpd 3).
- Cpd 1 (1.6 g, 1.0 eq) and 2,2-dithiodipyridne (5.1 g, 4.0 eq) were added to DMF (16 mL, 10 vol.).
- the reaction was stirred at room temperature for 6-12 hours; then water was added to the system; extracted with ethyl acetate (100mL*3); the organic phases were combined and dried with MgSO 4 and filtered; the organic phases were concentrated to obtain crude Cpd 2a, which was purified by column chromatography to obtain pure Py-SS-(N-Boc)-L-Cys-OtBu(Cpd 2a).
- Figure 1 shows the purity profile of Cpd 3 after purification
- Figure 2 shows the LCMS profile of Cpd 3 after purification.
- N-Boc-L-Cys-OtBu(Cpd 1) as a raw material, (N-Boc)-L-Cys(S-Cl)-OtBu(Cpd 2b) is synthesized by reacting with NCS; (N-Boc)- L-Cys(S-Cl)-OtBu(Cpd 2b) reacts with Fmoc-D-Cys-OH to obtain Fmoc-D-Cys(SS-(N-Boc)-L-Cys-(OtBu))-OH(Cpd) 3).
- Use amino resin including but not limited to Sieber resin, Rink Amide MBHA, Rink Amide resin
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Abstract
Description
Claims (11)
- 根据权利要求1所述的合成方法,其特征在于,所述初级产物为Py-S-S-(N-Boc)-L-Cys-OtBu,所述Fmoc-D-Cys(S-S-(N-Boc)-L-Cys(OtBu))-OH通过以下步骤制得:将N-Boc-L-Cys-OtBu与二硫二吡啶取代反应合成得到初级产物Py-S-S-(N-Boc)-L-Cys-OtBu;以及将所述Py-S-S-(N-Boc)-L-Cys-OtBu与Fmoc-D-Cys-OH偶联得到所述Fmoc-D-Cys-(S-S-(N-Boc)-L-Cys-OtBu)-OH。
- 根据权利要求2所述的合成方法,其特征在于,所述Fmoc-D-Cys(S-S-(N-Boc)-L-Cys(OtBu))-OH通过以下步骤制得:室温下,将N-Boc-L-Cys-OtBu和二硫二吡啶加入溶剂A中,搅拌6~12h,然后加入水,使用萃取剂萃取,对得到的有机相进行干燥及过滤,纯化后得到Py-S-S-(N-Boc)-L-Cys-OtBu;溶剂B中加入Fmoc-D-Cys-OH和Py-S-S-(N-Boc)-L-Cys-OtBu,控温15~30℃搅拌反应0.5~2h,对反应体系进行水洗、浓缩及纯化得到所述Fmoc-D-Cys(S-S-(N-Boc)-L-Cys(OtBu))-OH;所述溶剂A选自DMF、NMP和DMAc中的一种或多种;所述萃取剂选自EtOAc、MTBE和DCM中的一种或多种;所述溶剂B选自DCM、DMF、THF、NMP和DMAc中的一种或多种。
- 根据权利要求3所述的合成方法,其特征在于,所述N-Boc-L-Cys-OtBu与二硫二吡啶反应中,N-Boc-L-Cys-OtBu和二硫二吡啶的摩尔比为1:1.2~1:6.4;N-Boc-L-Cys-OtBu在所述溶剂A中的浓度为0.01~0.3g/mL;所述溶剂B中Fmoc-D-Cys-OH的浓度为0.01~0.3g/mL;Fmoc-D-Cys-OH与Py-S-S-(N-Boc)-L-Cys-OtBu的摩尔比为1:0.8~1.4。
- 根据权利要求1所述的合成方法,其特征在于,所述初级产物为(N-Boc)-L-Cys(S-Cl)-OtBu,所述Fmoc-D-Cys(S-S-(N-Boc)-L-Cys(OtBu))-OH通过以下步骤制得:将N-Boc-L-Cys-OtBu与NCS反应合成(N-Boc)-L-Cys(S-Cl)-OtBu;以及将(N-Boc)-L-Cys(S-Cl)-OtBu与Fmoc-D-Cys-OH反应得到Fmoc-D-Cys(S-S-(N-Boc)-L-Cys(OtBu))-OH。
- 根据权利要求5所述的合成方法,其特征在于,所述Fmoc-D-Cys(S-S-(N-Boc)-L-Cys(OtBu))-OH通过以下步骤制得:A.将N-Boc-L-Cys-OtBu溶解在溶剂C中,控温0~10℃,加入DIPEA,分批加入NCS,搅拌4~5h,反应结束后,过滤、淋洗,得到滤液;B.控温0~10℃,将Fmoc-D-Cys-OH加入所述滤液中,加入DIPEA,反应控温10~30℃,搅拌0.5~2h;对反应体系进行水洗、浓缩及纯化得到所述Fmoc-D-Cys(S-S-(N-Boc)-L-Cys(OtBu))-OH;所述溶剂C选自DCM、THF、DMF NMP和DMAc中的一种或多种。
- 根据权利要求6所述的合成方法,其特征在于,所述步骤A中,N-Boc-L-Cys-OtBu溶解在所述溶剂C中得到浓度为0.01~0.3g/mL的溶液,DIPEA的加入量为摩尔的2~3eq,NCS的加入量为1.1~1.5eq;所述步骤B中,Fmoc-D-Cys-OH的加入量为1.1~1.5eq。
- 一种依特卡肽的合成方法,其特征在于,包括以下步骤:S1,按照如权利要求1至7中任一项所述的依特卡肽中间体的合成方法合成Fmoc-D-Cys(S-S-(N-Boc)-L-Cys(OtBu))-OH;以及S2,将NH 2-D-Ala-D-Arg-D-Arg-D-Arg-D-Ala-D-Arg与所述Fmoc-D-Cys(S-S-(N-Boc)-L-Cys(OtBu))-OH反应,然后脱去Fmoc,再经过乙酰化得到依特卡肽。
- 根据权利要求8所述的合成方法,其特征在于,所述S2中,所述NH 2-D-Ala-D-Arg-D-Arg-D-Arg-D-Ala-D-Arg为NH 2-D-Ala-D-Arg-D-Arg-D-Arg-D-Ala-D-Arg-树脂六肽。
- 根据权利要求8所述的合成方法,其特征在于,所述S2包括:使用氨基树脂依照固相合成的方法链接NH 2-D-Ala-D-Arg-D-Arg-D-Arg-D-Ala-D-Arg-树脂六肽,将Fmoc-D-Cys(S-S-(N-Boc)-L-Cys(OtBu))-OH、PyBop和DIPEA在0~5℃活化0-10min,控温20~30℃反应2~6h,反应结束后用DMF洗涤4~6次,10%~20%哌啶脱去Fmoc,再经过乙酰化得到依特卡肽的肽树脂。
- 根据权利要求10所述的合成方法,其特征在于,Fmoc-D-Cys(S-S-(N-Boc)-L-Cys(OtBu))-OH:PyBop:DIPEA=3:3~6:3~6的比例。
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