EA201100001A3 - Нуклеотиды и нуклеозиды и методы их использования в секвенировании днк - Google Patents

Нуклеотиды и нуклеозиды и методы их использования в секвенировании днк

Info

Publication number
EA201100001A3
EA201100001A3 EA201100001A EA201100001A EA201100001A3 EA 201100001 A3 EA201100001 A3 EA 201100001A3 EA 201100001 A EA201100001 A EA 201100001A EA 201100001 A EA201100001 A EA 201100001A EA 201100001 A3 EA201100001 A3 EA 201100001A3
Authority
EA
Eurasian Patent Office
Prior art keywords
methods
cleavable
dna
nucleosides
nucleotides
Prior art date
Application number
EA201100001A
Other languages
English (en)
Other versions
EA201100001A2 (ru
Inventor
Владислав А. Лайташ
Меган Н. Хёш
Брайэн П. Стьюпи
Вэйданг Ву
Майкл Л. Метзкер
Original Assignee
Лейзеджен, Инк.
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Лейзеджен, Инк. filed Critical Лейзеджен, Инк.
Publication of EA201100001A2 publication Critical patent/EA201100001A2/ru
Publication of EA201100001A3 publication Critical patent/EA201100001A3/ru

Links

Classifications

    • C—CHEMISTRY; METALLURGY
    • C07—ORGANIC CHEMISTRY
    • C07H—SUGARS; DERIVATIVES THEREOF; NUCLEOSIDES; NUCLEOTIDES; NUCLEIC ACIDS
    • C07H19/00—Compounds containing a hetero ring sharing one ring hetero atom with a saccharide radical; Nucleosides; Mononucleotides; Anhydro-derivatives thereof
    • C07H19/02—Compounds containing a hetero ring sharing one ring hetero atom with a saccharide radical; Nucleosides; Mononucleotides; Anhydro-derivatives thereof sharing nitrogen
    • C07H19/04—Heterocyclic radicals containing only nitrogen atoms as ring hetero atom
    • C07H19/06—Pyrimidine radicals
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6869—Methods for sequencing
    • A—HUMAN NECESSITIES
    • A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61P—SPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P43/00—Drugs for specific purposes, not provided for in groups A61P1/00-A61P41/00
    • C—CHEMISTRY; METALLURGY
    • C07—ORGANIC CHEMISTRY
    • C07H—SUGARS; DERIVATIVES THEREOF; NUCLEOSIDES; NUCLEOTIDES; NUCLEIC ACIDS
    • C07H19/00—Compounds containing a hetero ring sharing one ring hetero atom with a saccharide radical; Nucleosides; Mononucleotides; Anhydro-derivatives thereof
    • C07H19/02—Compounds containing a hetero ring sharing one ring hetero atom with a saccharide radical; Nucleosides; Mononucleotides; Anhydro-derivatives thereof sharing nitrogen
    • C07H19/04—Heterocyclic radicals containing only nitrogen atoms as ring hetero atom
    • C07H19/06—Pyrimidine radicals
    • C07H19/10—Pyrimidine radicals with the saccharide radical esterified by phosphoric or polyphosphoric acids
    • C—CHEMISTRY; METALLURGY
    • C07—ORGANIC CHEMISTRY
    • C07H—SUGARS; DERIVATIVES THEREOF; NUCLEOSIDES; NUCLEOTIDES; NUCLEIC ACIDS
    • C07H19/00—Compounds containing a hetero ring sharing one ring hetero atom with a saccharide radical; Nucleosides; Mononucleotides; Anhydro-derivatives thereof
    • C07H19/02—Compounds containing a hetero ring sharing one ring hetero atom with a saccharide radical; Nucleosides; Mononucleotides; Anhydro-derivatives thereof sharing nitrogen
    • C07H19/04—Heterocyclic radicals containing only nitrogen atoms as ring hetero atom
    • C07H19/14—Pyrrolo-pyrimidine radicals
    • C—CHEMISTRY; METALLURGY
    • C07—ORGANIC CHEMISTRY
    • C07H—SUGARS; DERIVATIVES THEREOF; NUCLEOSIDES; NUCLEOTIDES; NUCLEIC ACIDS
    • C07H19/00—Compounds containing a hetero ring sharing one ring hetero atom with a saccharide radical; Nucleosides; Mononucleotides; Anhydro-derivatives thereof
    • C07H19/02—Compounds containing a hetero ring sharing one ring hetero atom with a saccharide radical; Nucleosides; Mononucleotides; Anhydro-derivatives thereof sharing nitrogen
    • C07H19/04—Heterocyclic radicals containing only nitrogen atoms as ring hetero atom
    • C07H19/16—Purine radicals
    • C—CHEMISTRY; METALLURGY
    • C07—ORGANIC CHEMISTRY
    • C07H—SUGARS; DERIVATIVES THEREOF; NUCLEOSIDES; NUCLEOTIDES; NUCLEIC ACIDS
    • C07H19/00—Compounds containing a hetero ring sharing one ring hetero atom with a saccharide radical; Nucleosides; Mononucleotides; Anhydro-derivatives thereof
    • C07H19/02—Compounds containing a hetero ring sharing one ring hetero atom with a saccharide radical; Nucleosides; Mononucleotides; Anhydro-derivatives thereof sharing nitrogen
    • C07H19/04—Heterocyclic radicals containing only nitrogen atoms as ring hetero atom
    • C07H19/16—Purine radicals
    • C07H19/20—Purine radicals with the saccharide radical esterified by phosphoric or polyphosphoric acids
    • C—CHEMISTRY; METALLURGY
    • C07—ORGANIC CHEMISTRY
    • C07H—SUGARS; DERIVATIVES THEREOF; NUCLEOSIDES; NUCLEOTIDES; NUCLEIC ACIDS
    • C07H21/00—Compounds containing two or more mononucleotide units having separate phosphate or polyphosphate groups linked by saccharide radicals of nucleoside groups, e.g. nucleic acids
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2525/00—Reactions involving modified oligonucleotides, nucleic acids, or nucleotides
    • C12Q2525/10—Modifications characterised by
    • C12Q2525/117—Modifications characterised by incorporating modified base
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2563/00—Nucleic acid detection characterized by the use of physical, structural and functional properties
    • C12Q2563/107—Nucleic acid detection characterized by the use of physical, structural and functional properties fluorescence

Landscapes

  • Chemical & Material Sciences (AREA)
  • Organic Chemistry (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Health & Medical Sciences (AREA)
  • Engineering & Computer Science (AREA)
  • General Health & Medical Sciences (AREA)
  • Biochemistry (AREA)
  • Molecular Biology (AREA)
  • Genetics & Genomics (AREA)
  • Biotechnology (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Wood Science & Technology (AREA)
  • Zoology (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Microbiology (AREA)
  • Immunology (AREA)
  • Biophysics (AREA)
  • General Engineering & Computer Science (AREA)
  • Analytical Chemistry (AREA)
  • Physics & Mathematics (AREA)
  • Pharmacology & Pharmacy (AREA)
  • Veterinary Medicine (AREA)
  • Medicinal Chemistry (AREA)
  • Nuclear Medicine, Radiotherapy & Molecular Imaging (AREA)
  • Chemical Kinetics & Catalysis (AREA)
  • Animal Behavior & Ethology (AREA)
  • Public Health (AREA)
  • General Chemical & Material Sciences (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
  • Saccharide Compounds (AREA)
  • Organic Low-Molecular-Weight Compounds And Preparation Thereof (AREA)
  • Pharmaceuticals Containing Other Organic And Inorganic Compounds (AREA)
  • Plural Heterocyclic Compounds (AREA)
  • Pyrane Compounds (AREA)
  • Investigating Or Analysing Biological Materials (AREA)

Abstract

Данное изобретение в целом относится к меченым и не помеченным расщепляемым терминирующим группам и методам для ДНК-секвенирования и других типов ДНК-анализа. В частности, изобретение относится к нуклеотидам и нуклеозидам с химически расщепляемыми, фоторасщепляемыми, ферментно расщепляемыми или нефоторасщепляемыми группами и методам их использования в ДНК-секвенировании и применению в биомедицинских исследованиях.
EA201100001A 2008-06-11 2009-06-11 Нуклеотиды и нуклеозиды и методы их использования в секвенировании днк EA201100001A3 (ru)

Applications Claiming Priority (3)

Application Number Priority Date Filing Date Title
US6079508P 2008-06-11 2008-06-11
US18477909P 2009-06-05 2009-06-05
PCT/US2009/047071 WO2009152353A2 (en) 2008-06-11 2009-06-11 Nucleotides and nucleosides and methods for their use in dna sequencing

Publications (2)

Publication Number Publication Date
EA201100001A2 EA201100001A2 (ru) 2012-10-30
EA201100001A3 true EA201100001A3 (ru) 2013-03-29

Family

ID=41417396

Family Applications (1)

Application Number Title Priority Date Filing Date
EA201100001A EA201100001A3 (ru) 2008-06-11 2009-06-11 Нуклеотиды и нуклеозиды и методы их использования в секвенировании днк

Country Status (15)

Country Link
US (4) US8148503B2 (ru)
EP (1) EP2307565B1 (ru)
JP (1) JP5143953B2 (ru)
KR (1) KR101677772B1 (ru)
CN (2) CN103588839B (ru)
AU (1) AU2009257369B2 (ru)
BR (1) BRPI0915173B8 (ru)
CA (2) CA2727709C (ru)
EA (1) EA201100001A3 (ru)
HK (1) HK1163184A1 (ru)
IL (1) IL209917A (ru)
MX (1) MX2010013678A (ru)
NZ (2) NZ590265A (ru)
WO (1) WO2009152353A2 (ru)
ZA (1) ZA201100122B (ru)

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CN113272443A (zh) 2019-01-07 2021-08-17 安捷伦科技有限公司 用于单细胞中的基因组dna和基因表达分析的组合物和方法
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CN117693581A (zh) 2021-06-29 2024-03-12 安捷伦科技有限公司 聚合酶突变体以及与3'-oh未封闭的可逆终止子一起使用
WO2023282245A1 (ja) 2021-07-05 2023-01-12 国立研究開発法人科学技術振興機構 ヌクレオチド類の精製方法及びヌクレオチド類の精製装置並びに疎水性試薬及び疎水性基質

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Also Published As

Publication number Publication date
CN103588839A (zh) 2014-02-19
WO2009152353A3 (en) 2013-09-26
US8148503B2 (en) 2012-04-03
WO2009152353A2 (en) 2009-12-17
US20150140559A1 (en) 2015-05-21
CA2727709C (en) 2017-11-14
EP2307565A2 (en) 2011-04-13
AU2009257369B2 (en) 2015-03-26
JP5143953B2 (ja) 2013-02-13
CA2979146A1 (en) 2009-12-17
CN102264917B (zh) 2015-06-10
US20130035237A1 (en) 2013-02-07
AU2009257369A1 (en) 2009-12-17
KR101677772B1 (ko) 2016-11-18
EP2307565B1 (en) 2017-11-29
IL209917A (en) 2014-06-30
NZ590265A (en) 2012-11-30
JP2011529449A (ja) 2011-12-08
US20140051848A1 (en) 2014-02-20
CA2727709A1 (en) 2009-12-17
US8497360B2 (en) 2013-07-30
CA2979146C (en) 2020-07-07
NZ594812A (en) 2012-12-21
BRPI0915173B8 (pt) 2021-05-25
EA201100001A2 (ru) 2012-10-30
CN103588839B (zh) 2017-04-12
ZA201100122B (en) 2013-09-25
US9200319B2 (en) 2015-12-01
CN102264917A (zh) 2011-11-30
BRPI0915173B1 (pt) 2021-05-04
HK1163184A1 (en) 2012-09-07
KR20110031191A (ko) 2011-03-24
US20100041041A1 (en) 2010-02-18
BRPI0915173A2 (pt) 2015-08-18
IL209917A0 (en) 2011-02-28
US8877905B2 (en) 2014-11-04
MX2010013678A (es) 2011-02-24

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