DK3004392T3 - Genekspressionsprofilalgoritme til beregning af en recidivscore for en patient med nyrecancer - Google Patents
Genekspressionsprofilalgoritme til beregning af en recidivscore for en patient med nyrecancer Download PDFInfo
- Publication number
- DK3004392T3 DK3004392T3 DK14804772.3T DK14804772T DK3004392T3 DK 3004392 T3 DK3004392 T3 DK 3004392T3 DK 14804772 T DK14804772 T DK 14804772T DK 3004392 T3 DK3004392 T3 DK 3004392T3
- Authority
- DK
- Denmark
- Prior art keywords
- algorm
- recurrency
- score
- patient
- calculating
- Prior art date
Links
Classifications
-
- G—PHYSICS
- G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
- G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
- G16B20/00—ICT specially adapted for functional genomics or proteomics, e.g. genotype-phenotype associations
- G16B20/20—Allele or variant detection, e.g. single nucleotide polymorphism [SNP] detection
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
- C12Q1/6876—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes
- C12Q1/6883—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for diseases caused by alterations of genetic material
- C12Q1/6886—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for diseases caused by alterations of genetic material for cancer
-
- G—PHYSICS
- G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
- G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
- G16B20/00—ICT specially adapted for functional genomics or proteomics, e.g. genotype-phenotype associations
-
- G—PHYSICS
- G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
- G16C—COMPUTATIONAL CHEMISTRY; CHEMOINFORMATICS; COMPUTATIONAL MATERIALS SCIENCE
- G16C99/00—Subject matter not provided for in other groups of this subclass
-
- G—PHYSICS
- G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
- G16H—HEALTHCARE INFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR THE HANDLING OR PROCESSING OF MEDICAL OR HEALTHCARE DATA
- G16H50/00—ICT specially adapted for medical diagnosis, medical simulation or medical data mining; ICT specially adapted for detecting, monitoring or modelling epidemics or pandemics
- G16H50/30—ICT specially adapted for medical diagnosis, medical simulation or medical data mining; ICT specially adapted for detecting, monitoring or modelling epidemics or pandemics for calculating health indices; for individual health risk assessment
-
- G—PHYSICS
- G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
- G16Z—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS, NOT OTHERWISE PROVIDED FOR
- G16Z99/00—Subject matter not provided for in other main groups of this subclass
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q2600/00—Oligonucleotides characterized by their use
- C12Q2600/118—Prognosis of disease development
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q2600/00—Oligonucleotides characterized by their use
- C12Q2600/158—Expression markers
Landscapes
- Health & Medical Sciences (AREA)
- Engineering & Computer Science (AREA)
- Life Sciences & Earth Sciences (AREA)
- Chemical & Material Sciences (AREA)
- Bioinformatics & Cheminformatics (AREA)
- Proteomics, Peptides & Aminoacids (AREA)
- Physics & Mathematics (AREA)
- General Health & Medical Sciences (AREA)
- Genetics & Genomics (AREA)
- Analytical Chemistry (AREA)
- Medical Informatics (AREA)
- Pathology (AREA)
- Organic Chemistry (AREA)
- Molecular Biology (AREA)
- Biophysics (AREA)
- Biotechnology (AREA)
- Theoretical Computer Science (AREA)
- Bioinformatics & Computational Biology (AREA)
- Zoology (AREA)
- Public Health (AREA)
- Wood Science & Technology (AREA)
- Immunology (AREA)
- Evolutionary Biology (AREA)
- Spectroscopy & Molecular Physics (AREA)
- Data Mining & Analysis (AREA)
- Hospice & Palliative Care (AREA)
- Primary Health Care (AREA)
- Oncology (AREA)
- Microbiology (AREA)
- Biomedical Technology (AREA)
- Databases & Information Systems (AREA)
- Epidemiology (AREA)
- Biochemistry (AREA)
- General Engineering & Computer Science (AREA)
- Computing Systems (AREA)
- Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
Applications Claiming Priority (2)
| Application Number | Priority Date | Filing Date | Title |
|---|---|---|---|
| US201361829100P | 2013-05-30 | 2013-05-30 | |
| PCT/US2014/040003 WO2014194078A1 (en) | 2013-05-30 | 2014-05-29 | Gene expression profile algorithm for calculating a recurrence score for a patient with kidney cancer |
Publications (1)
| Publication Number | Publication Date |
|---|---|
| DK3004392T3 true DK3004392T3 (da) | 2020-10-26 |
Family
ID=51989393
Family Applications (1)
| Application Number | Title | Priority Date | Filing Date |
|---|---|---|---|
| DK14804772.3T DK3004392T3 (da) | 2013-05-30 | 2014-05-29 | Genekspressionsprofilalgoritme til beregning af en recidivscore for en patient med nyrecancer |
Country Status (11)
| Country | Link |
|---|---|
| US (3) | US10181008B2 (enExample) |
| EP (2) | EP3004392B1 (enExample) |
| JP (3) | JP2016521979A (enExample) |
| AU (2) | AU2014274135B2 (enExample) |
| CA (2) | CA3093128C (enExample) |
| DK (1) | DK3004392T3 (enExample) |
| ES (1) | ES2829415T3 (enExample) |
| IL (2) | IL240919B (enExample) |
| MX (2) | MX369911B (enExample) |
| SG (2) | SG10201709537PA (enExample) |
| WO (1) | WO2014194078A1 (enExample) |
Families Citing this family (9)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| WO2018187767A1 (en) * | 2017-04-06 | 2018-10-11 | The Regents Of The University Of California | Predicting, diagnosing, and treating nausea and vomiting of pregnancy |
| US11810672B2 (en) | 2017-10-12 | 2023-11-07 | Nantomics, Llc | Cancer score for assessment and response prediction from biological fluids |
| WO2020092808A1 (en) | 2018-10-31 | 2020-05-07 | Regents Of The University Of Minnesota | Methods for predicting a response to bevacizumab or platinum-based chemotherapy or both in patients with ovarian cancer |
| KR102280204B1 (ko) * | 2018-12-13 | 2021-07-21 | 연세대학교 산학협력단 | 신장 세포 암의 종양의 병리학적 등급에 대한 정보를 제공하기 위한 방법 및 장치 |
| CA3126455A1 (en) * | 2019-01-11 | 2020-07-16 | Quadrus Medical Technologies, Inc. | Systems and methods for assessing and evaluating renal health diagnosis, staging, and therapy recommendation |
| EP3978629A1 (en) * | 2020-10-01 | 2022-04-06 | Koninklijke Philips N.V. | Prediction of an outcome of a bladder or kidney cancer subject |
| CN113593640B (zh) * | 2021-08-03 | 2023-07-28 | 哈尔滨市米杰生物科技有限公司 | 一种鳞癌组织功能状态与细胞组分评估方法及系统 |
| WO2025085824A1 (en) * | 2023-10-20 | 2025-04-24 | Memorial Sloan-Kettering Cancer Center | Multi-scale analysis of ribonucleic acid sequence data for predicting responses to anti-cancer therapies |
| CN117935910B (zh) * | 2024-01-26 | 2024-09-17 | 华中农业大学 | 玉米snp位点的筛选方法、装置、电子设备及介质 |
Family Cites Families (54)
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| US7135314B1 (en) | 1997-04-17 | 2006-11-14 | Cell Therapeutics, Inc. | Human phosphatidic acid phosphatase |
| ATE424457T1 (de) | 2000-01-13 | 2009-03-15 | Genentech Inc | Menschliche stra6 polypeptide |
| US6475855B1 (en) | 2000-03-01 | 2002-11-05 | Micron Technology, Inc. | Method of forming integrated circuitry, method of forming a capacitor and method of forming DRAM integrated circuitry |
| DE10126344A1 (de) | 2000-07-14 | 2002-01-24 | Max Planck Gesellschaft | Apoptose-induzierende DNA-Sequenzen |
| AU2001294842A1 (en) | 2000-09-28 | 2002-04-08 | Atairgin Technologies, Inc. | A method of determining tumor characteristics by determining abnormal copy number or expression level of lipid-associated genes |
| WO2002074237A2 (en) | 2001-03-19 | 2002-09-26 | Corixa Corporation | Compositions and methods for the therapy and diagnosis of kidney cancer |
| US20060088823A1 (en) | 2001-03-29 | 2006-04-27 | Brian Haab | Microarray gene expression profiling in clear cell renal cell carcinoma : prognosis and drug target identification |
| DK1410011T3 (da) | 2001-06-18 | 2011-07-18 | Netherlands Cancer Inst | Diagnose og prognose for brystcancerpatienter |
| US7470509B2 (en) | 2002-02-08 | 2008-12-30 | Millennium Pharmaceuticals, Inc. | Compositions and methods for the identification, assessment, prevention and therapy of ovarian cancer |
| EP2261368A1 (en) | 2002-03-13 | 2010-12-15 | Genomic Health, Inc. | Gene expression profiling in biopsied tumor tissues |
| EP1570078A4 (en) | 2002-10-04 | 2006-09-13 | Van Andel Res Inst | MOLECULAR CLASSIFICATION OF RENAL TUMORS AND DISCOVERING NEW DIAGNOSTIC MARKERS |
| JP2006514554A (ja) | 2002-11-21 | 2006-05-11 | ワイス | 腎細胞癌および他の固形腫瘍の診断法 |
| AU2004235395A1 (en) | 2003-04-29 | 2004-11-11 | Wyeth | Methods for prognosis and treatment of solid tumors |
| WO2005039382A2 (en) | 2003-06-24 | 2005-05-06 | Genomic Health | Prediction of likelihood of cancer recurrence |
| AU2004256182A1 (en) | 2003-07-02 | 2005-01-20 | Novartis Ag | Genes regulated in ovarian cancer as prognostic and therapeutic targets |
| US20050002904A1 (en) | 2003-07-03 | 2005-01-06 | Wary Kishore K. | Uses of vascular endothelial growth factor and type I collagen inducible protein (VCIP) |
| EP1644858B1 (en) * | 2003-07-10 | 2017-12-06 | Genomic Health, Inc. | Expression profile algorithm and test for cancer prognosis |
| JP2005211023A (ja) | 2004-01-30 | 2005-08-11 | Hayashibara Biochem Lab Inc | 腎細胞癌の転移若しくは再発の可能性を予測する方法 |
| CA2848463A1 (en) | 2004-04-09 | 2005-10-27 | Genomic Health, Inc. | Gene expression markers for predicting response to chemotherapy |
| US20070224596A1 (en) | 2004-04-09 | 2007-09-27 | Mariana Nacht | Compositions and methods for the modifying hypoxia induced gene regulation |
| AU2005241093B2 (en) * | 2004-05-04 | 2008-06-05 | Institute Of Virology Of Slovak Academy Of Sciences | MN/CA IX/ CA9 and renal cancer prognosis |
| JP2008500057A (ja) | 2004-05-27 | 2008-01-10 | バーテックス ファーマシューティカルズ インコーポレイテッド | Ｉｍｐｄｈ経路の阻害をモニタリングするためのバイオマーカー |
| US7587279B2 (en) | 2004-07-06 | 2009-09-08 | Genomic Health | Method for quantitative PCR data analysis system (QDAS) |
| WO2006066071A2 (en) | 2004-12-17 | 2006-06-22 | Mayo Foundation For Medical Education And Research | Prognosis of renal cell carcinoma |
| CA2596469A1 (en) | 2005-02-01 | 2006-08-10 | Government Of The U.S.A, As Represented By The Secretary Department Of H Ealth & Human Services | Biomarkers for tissue status |
| BRPI0608429A2 (pt) | 2005-02-18 | 2009-12-29 | Wyeth Corp | método e kit para prognóstico ou avaliação da eficácia do tratamento de um tumor sólido em um paciente de interesse; e método para a identificação de marcadores que sejam prognósticos de um tumor sólido |
| EP1910564A1 (en) | 2005-05-13 | 2008-04-16 | Duke University | Gene expression signatures for oncogenic pathway deregulation |
| WO2006124022A1 (en) | 2005-05-13 | 2006-11-23 | Vanandel Research Institute | Microarray gene expression profiling in subtypes of clear cell renal cell carcinoma |
| US20070037186A1 (en) | 2005-05-20 | 2007-02-15 | Yuqiu Jiang | Thyroid fine needle aspiration molecular assay |
| JP5904569B2 (ja) | 2005-06-08 | 2016-04-13 | ミレニアム ファーマシューティカルズ， インコーポレイテッドＭｉｌｌｅｎｎｉｕｍ Ｐｈａｒｍａｃｅｕｔｉｃａｌｓ， Ｉｎｃ． | 癌治療を受けている患者の同定、判定および処置のための方法 |
| WO2006138275A2 (en) | 2005-06-13 | 2006-12-28 | The Regents Of The University Of Michigan | Compositions and methods for treating and diagnosing cancer |
| US20070099209A1 (en) | 2005-06-13 | 2007-05-03 | The Regents Of The University Of Michigan | Compositions and methods for treating and diagnosing cancer |
| AU2006257647A1 (en) | 2005-06-15 | 2006-12-21 | Pfizer Limited | Substituted arylpyrazoles for use against parasites |
| JP5435529B2 (ja) | 2005-09-02 | 2014-03-05 | 東レ株式会社 | 腎ガン診断、腎ガン患者予後予測のための組成物および方法 |
| US8343738B2 (en) | 2005-09-14 | 2013-01-01 | Human Genetic Signatures Pty. Ltd. | Assay for screening for potential cervical cancer |
| AU2006299079A1 (en) | 2005-09-30 | 2007-04-12 | Universiteit Maastricht | Tumor angiogenesis associated genes and a method for their identification |
| EP1777523A1 (en) | 2005-10-19 | 2007-04-25 | INSERM (Institut National de la Santé et de la Recherche Médicale) | An in vitro method for the prognosis of progression of a cancer and of the outcome in a patient and means for performing said method |
| US8445198B2 (en) | 2005-12-01 | 2013-05-21 | Medical Prognosis Institute | Methods, kits and devices for identifying biomarkers of treatment response and use thereof to predict treatment efficacy |
| JP5984324B2 (ja) | 2005-12-01 | 2016-09-06 | メディカル プログノシス インスティテュート エー／エス | 治療反応のバイオマーカーを同定するための方法および装置、ならびに治療効果を推定するためのその使用 |
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| US20080242606A1 (en) | 2006-06-06 | 2008-10-02 | Zhong Jiang | Use of IMP3 as a Prognostic Marker for Cancer |
| EP2046973A4 (en) | 2006-08-10 | 2010-04-07 | Millennium Pharm Inc | METHODS OF IDENTIFYING, EVALUATING, AND TREATING PATIENTS SUBJECTED TO ANTICANCER THERAPY |
| WO2008021115A2 (en) | 2006-08-14 | 2008-02-21 | The Brigham And Women's Hospital, Inc. | Diagnostic tests using gene expression ratios |
| US9034574B2 (en) * | 2006-12-27 | 2015-05-19 | The Johns Hopkins University | Agents for reversing epigenetic silencing of genes |
| US20080286273A1 (en) | 2007-05-02 | 2008-11-20 | Siemens Medical Solutions Usa, Inc. | Knowledge-Based Proliferation Signatures and Methods of Use |
| EP1990417A1 (en) | 2007-05-11 | 2008-11-12 | Universität Bayreuth | Archaeal plasmid vector system |
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| GB2512153B (en) | 2008-11-17 | 2014-11-12 | Veracyte Inc | Methods and compositions of molecular profiling for disease diagnostics |
| CA2766703A1 (en) | 2009-06-26 | 2010-12-29 | Noviogendix Research B.V. | Molecular markers in kidney cancer |
| US9005891B2 (en) | 2009-11-10 | 2015-04-14 | Genomic Health, Inc. | Methods for depleting RNA from nucleic acid samples |
| WO2011063274A2 (en) * | 2009-11-23 | 2011-05-26 | Genomic Health, Inc. | Methods to predict clinical outcome of cancer |
| CA3256492A1 (en) * | 2010-01-11 | 2025-11-29 | Genomic Health Inc | Method to use gene expression to determine likelihood of clinical outcome of renal cancer |
| BR112013032232A2 (pt) * | 2011-06-16 | 2016-09-20 | Caris Life Sciences Switzerland Holdings S A R L | método de caracterização de câncer através do uso de biomarcador de ácido nucleico |
| CA2843756A1 (en) * | 2011-08-22 | 2013-02-28 | Somalogic, Inc. | Renal cell carcinoma biomarkers and uses thereof |
-
2014
- 2014-05-29 ES ES14804772T patent/ES2829415T3/es active Active
- 2014-05-29 WO PCT/US2014/040003 patent/WO2014194078A1/en not_active Ceased
- 2014-05-29 EP EP14804772.3A patent/EP3004392B1/en active Active
- 2014-05-29 CA CA3093128A patent/CA3093128C/en active Active
- 2014-05-29 AU AU2014274135A patent/AU2014274135B2/en active Active
- 2014-05-29 JP JP2016516815A patent/JP2016521979A/ja active Pending
- 2014-05-29 MX MX2015012782A patent/MX369911B/es active IP Right Grant
- 2014-05-29 CA CA2903878A patent/CA2903878C/en active Active
- 2014-05-29 DK DK14804772.3T patent/DK3004392T3/da active
- 2014-05-29 SG SG10201709537PA patent/SG10201709537PA/en unknown
- 2014-05-29 US US14/779,428 patent/US10181008B2/en active Active
- 2014-05-29 EP EP20198766.6A patent/EP3825420A1/en not_active Withdrawn
- 2014-05-29 SG SG11201506987VA patent/SG11201506987VA/en unknown
-
2015
- 2015-08-30 IL IL240919A patent/IL240919B/en active IP Right Grant
- 2015-09-14 MX MX2019013953A patent/MX2019013953A/es unknown
-
2018
- 2018-07-17 JP JP2018134242A patent/JP2018161151A/ja active Pending
- 2018-11-26 US US16/199,707 patent/US20190095575A1/en not_active Abandoned
-
2020
- 2020-07-06 AU AU2020204502A patent/AU2020204502B2/en active Active
- 2020-08-18 JP JP2020138078A patent/JP7301798B2/ja active Active
- 2020-11-02 US US17/086,850 patent/US11551782B2/en active Active
-
2021
- 2021-05-30 IL IL283548A patent/IL283548A/en unknown
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