DK1828381T3 - Templatedirigeret split-and-mix-syntese af småmolekylebiblioteker - Google Patents
Templatedirigeret split-and-mix-syntese af småmolekylebibliotekerInfo
- Publication number
- DK1828381T3 DK1828381T3 DK05806601T DK05806601T DK1828381T3 DK 1828381 T3 DK1828381 T3 DK 1828381T3 DK 05806601 T DK05806601 T DK 05806601T DK 05806601 T DK05806601 T DK 05806601T DK 1828381 T3 DK1828381 T3 DK 1828381T3
- Authority
- DK
- Denmark
- Prior art keywords
- molecule
- oligonucleotide
- template
- small molecule
- reaction wells
- Prior art date
Links
Classifications
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
- C12N15/00—Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
- C12N15/09—Recombinant DNA-technology
- C12N15/10—Processes for the isolation, preparation or purification of DNA or RNA
- C12N15/1034—Isolating an individual clone by screening libraries
- C12N15/1065—Preparation or screening of tagged libraries, e.g. tagged microorganisms by STM-mutagenesis, tagged polynucleotides, gene tags
-
- B—PERFORMING OPERATIONS; TRANSPORTING
- B01—PHYSICAL OR CHEMICAL PROCESSES OR APPARATUS IN GENERAL
- B01J—CHEMICAL OR PHYSICAL PROCESSES, e.g. CATALYSIS OR COLLOID CHEMISTRY; THEIR RELEVANT APPARATUS
- B01J19/00—Chemical, physical or physico-chemical processes in general; Their relevant apparatus
- B01J19/0046—Sequential or parallel reactions, e.g. for the synthesis of polypeptides or polynucleotides; Apparatus and devices for combinatorial chemistry or for making molecular arrays
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
- C12N15/00—Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
- C12N15/09—Recombinant DNA-technology
- C12N15/10—Processes for the isolation, preparation or purification of DNA or RNA
- C12N15/1034—Isolating an individual clone by screening libraries
- C12N15/1068—Template (nucleic acid) mediated chemical library synthesis, e.g. chemical and enzymatical DNA-templated organic molecule synthesis, libraries prepared by non ribosomal polypeptide synthesis [NRPS], DNA/RNA-polymerase mediated polypeptide synthesis
Landscapes
- Chemical & Material Sciences (AREA)
- Life Sciences & Earth Sciences (AREA)
- Health & Medical Sciences (AREA)
- Genetics & Genomics (AREA)
- Organic Chemistry (AREA)
- Engineering & Computer Science (AREA)
- Zoology (AREA)
- Wood Science & Technology (AREA)
- Biomedical Technology (AREA)
- Bioinformatics & Cheminformatics (AREA)
- Biotechnology (AREA)
- General Engineering & Computer Science (AREA)
- Molecular Biology (AREA)
- General Health & Medical Sciences (AREA)
- Biophysics (AREA)
- Microbiology (AREA)
- Physics & Mathematics (AREA)
- Crystallography & Structural Chemistry (AREA)
- Biochemistry (AREA)
- Plant Pathology (AREA)
- Bioinformatics & Computational Biology (AREA)
- Chemical Kinetics & Catalysis (AREA)
- Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
- Saccharide Compounds (AREA)
- Investigating Or Analysing Biological Materials (AREA)
- Nitrogen Condensed Heterocyclic Rings (AREA)
Applications Claiming Priority (2)
Application Number | Priority Date | Filing Date | Title |
---|---|---|---|
DKPA200401809 | 2004-11-22 | ||
PCT/DK2005/000747 WO2006053571A2 (en) | 2004-11-22 | 2005-11-22 | Template directed split and mix systhesis of small molecule libraries |
Publications (1)
Publication Number | Publication Date |
---|---|
DK1828381T3 true DK1828381T3 (da) | 2009-02-23 |
Family
ID=36407493
Family Applications (1)
Application Number | Title | Priority Date | Filing Date |
---|---|---|---|
DK05806601T DK1828381T3 (da) | 2004-11-22 | 2005-11-22 | Templatedirigeret split-and-mix-syntese af småmolekylebiblioteker |
Country Status (6)
Country | Link |
---|---|
US (8) | US8168381B2 (da) |
EP (1) | EP1828381B1 (da) |
AT (1) | ATE420170T1 (da) |
DE (1) | DE602005012319D1 (da) |
DK (1) | DK1828381T3 (da) |
WO (1) | WO2006053571A2 (da) |
Families Citing this family (73)
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---|---|---|---|---|
EP1401850A1 (en) | 2001-06-20 | 2004-03-31 | Nuevolution A/S | Nucleoside derivatives for library preparation |
EP2186897B1 (en) | 2002-03-15 | 2016-02-17 | Nuevolution A/S | An improved method for synthesising templated molecules |
WO2004013070A2 (en) | 2002-08-01 | 2004-02-12 | Nuevolution A/S | Multi-step synthesis of templated molecules |
CN106337046B (zh) | 2002-10-30 | 2021-03-23 | 纽韦卢森公司 | 合成双功能复合物的方法 |
US9121110B2 (en) | 2002-12-19 | 2015-09-01 | Nuevolution A/S | Quasirandom structure and function guided synthesis methods |
EP1597395A2 (en) | 2003-02-21 | 2005-11-23 | Nuevolution A/S | Method for producing second-generation library |
DE602004019764D1 (de) | 2003-03-20 | 2009-04-16 | Nuevolution As | Ligationsvermittelnde codierung von kleinen molekülen |
WO2005026387A1 (en) | 2003-09-18 | 2005-03-24 | Nuevolution A/S | A method for obtaining structural information concerning an encoded molecule and method for selecting compounds |
AU2004299145B2 (en) | 2003-12-17 | 2011-08-25 | Glaxosmithkline Llc | Methods for synthesis of encoded libraries |
US7972994B2 (en) | 2003-12-17 | 2011-07-05 | Glaxosmithkline Llc | Methods for synthesis of encoded libraries |
DE602005017370D1 (de) | 2004-03-22 | 2009-12-10 | Nuevolution As | Ligationscodierung unter verwendung von oligonukleotidbausteinen |
DK1828381T3 (da) * | 2004-11-22 | 2009-02-23 | Peter Birk Rasmussen | Templatedirigeret split-and-mix-syntese af småmolekylebiblioteker |
KR101346432B1 (ko) * | 2005-06-09 | 2014-02-14 | 프래시스 파마슈티컬즈 인코포레이티드 | 코드된 라이브러리를 합성하는 방법 |
JP2009513135A (ja) | 2005-10-28 | 2009-04-02 | プリーシス・ファーマシューティカルズ・インコーポレイテッド | エンコードされたライブラリーを用いて興味のある化合物を同定する方法 |
ATE490318T1 (de) | 2005-12-01 | 2010-12-15 | Nuevolution As | Enzymvermittelnde kodierungsmethoden für eine effiziente synthese von grossen bibliotheken |
GB0712245D0 (en) * | 2007-06-25 | 2007-08-01 | Cythera Technologies Ltd | Combinatorial libraries and related methods |
ES2638324T3 (es) | 2009-02-13 | 2017-10-19 | X-Chem, Inc. | Métodos de creación y examen de bibliotecas codificadas por ADN |
US8716191B2 (en) | 2009-06-22 | 2014-05-06 | Universite De Strasbourg | Method of preparing an adduct |
US10787701B2 (en) | 2010-04-05 | 2020-09-29 | Prognosys Biosciences, Inc. | Spatially encoded biological assays |
US20190300945A1 (en) | 2010-04-05 | 2019-10-03 | Prognosys Biosciences, Inc. | Spatially Encoded Biological Assays |
CA2832672A1 (en) | 2010-04-16 | 2011-10-20 | Nuevolution A/S | Bi-functional complexes and methods for making and using such complexes |
JP6193761B2 (ja) | 2010-09-27 | 2017-09-06 | ビペルゲン | 富化ライブラリーを作製する方法 |
GB201106254D0 (en) | 2011-04-13 | 2011-05-25 | Frisen Jonas | Method and product |
US9695530B2 (en) * | 2011-08-11 | 2017-07-04 | Deborah Jean Hall | Apparatus to facilitate the commencement and execution of off-loom bead weaving stitches and method(s) of using same |
LT2944693T (lt) * | 2011-08-26 | 2019-08-26 | Gen9, Inc. | Kompozicijos ir būdai, skirti nukleorūgščių didelio tikslumo sąrankai |
US10865409B2 (en) | 2011-09-07 | 2020-12-15 | X-Chem, Inc. | Methods for tagging DNA-encoded libraries |
KR102270554B1 (ko) | 2012-07-13 | 2021-06-28 | 엑스-켐, 인크. | 폴리머라제에 의해 판독가능하지 않은 코딩 올리고뉴클레오티드 연결을 갖는 dna-코딩된 라이브러리 |
JP6710157B2 (ja) | 2013-06-04 | 2020-06-17 | トリビオティカ・エルエルシー | 核酸に特異的なヘテロ化合物のテンプレート化アセンブリのための方法及び組成物 |
WO2014210223A1 (en) | 2013-06-25 | 2014-12-31 | Prognosys Biosciences, Inc. | Spatially encoded biological assays using a microfluidic device |
US9765375B2 (en) | 2013-06-28 | 2017-09-19 | General Electric Company | Methods for developing binding-elements and uses thereof |
US10533216B2 (en) | 2014-05-23 | 2020-01-14 | Centrillion Technology Holdings Corporation | Oligonucleotide probe inversion process for in situ synthesized probe arrays |
US20180340174A1 (en) | 2014-11-11 | 2018-11-29 | Nanocore Aps | Method for identification of molecules with desired characteristics |
NL2013857B1 (en) * | 2014-11-21 | 2016-10-11 | Piculet Biosciences Tech B V | Self-assembled bivalent ligand complex (SABLC) libraries and methods for screening such libraries. |
CA2968552A1 (en) | 2014-12-02 | 2016-06-09 | Tribiotica Llc | Methods and kits for theranostic applications |
ES2935860T3 (es) | 2015-04-10 | 2023-03-13 | Spatial Transcriptomics Ab | Análisis de ácidos nucleicos múltiplex, espacialmente distinguidos de especímenes biológicos |
US10695735B2 (en) | 2015-08-18 | 2020-06-30 | Centrillion Technology Holdings Corporation | Probe inversion process for in situ synthesized probe arrays |
US11124791B2 (en) | 2015-09-14 | 2021-09-21 | Arizona Board Of Regents On Behalf Of Arizona State University | Generating recombinant affinity reagents with arrayed targets |
WO2017218293A1 (en) | 2016-06-16 | 2017-12-21 | Richard Edward Watts | Oligonucleotide directed and recorded combinatorial synthesis of encoded probe molecules |
WO2018093978A2 (en) * | 2016-11-21 | 2018-05-24 | Tribiotica Llc | Methods for split-protein template assembly by proximity-enhanced reactivity |
WO2018094070A1 (en) | 2016-11-21 | 2018-05-24 | Tribiotica Llc | Methods for preventing titration of bimolecular templated assembly reactions by structurally-determined differential hybridizations |
WO2018094195A1 (en) * | 2016-11-21 | 2018-05-24 | Tribiotica Llc | Methods for directed folding assembly or dimerization of proteins by templated assembly reactions |
JP6911248B2 (ja) | 2017-03-17 | 2021-07-28 | 成都先導薬物開発股▲フン▼有限公司Hitgen Inc. | エンコードライブラリの合成方法及び組成物 |
EP3619340A4 (en) | 2017-05-02 | 2021-01-20 | Haystack Sciences Corporation | MOLECULES FOR THE VERIFICATION OF OLIGONUCLEOTIDE DIRECTED COMBINATIONAL SYNTHESIS AND METHOD OF MANUFACTURING AND USING THEREOF |
US11519033B2 (en) | 2018-08-28 | 2022-12-06 | 10X Genomics, Inc. | Method for transposase-mediated spatial tagging and analyzing genomic DNA in a biological sample |
EP3894585A2 (en) | 2018-12-10 | 2021-10-20 | 10X Genomics, Inc. | Generating capture probes for spatial analysis |
US11649485B2 (en) | 2019-01-06 | 2023-05-16 | 10X Genomics, Inc. | Generating capture probes for spatial analysis |
US11926867B2 (en) | 2019-01-06 | 2024-03-12 | 10X Genomics, Inc. | Generating capture probes for spatial analysis |
US11634835B2 (en) | 2019-01-22 | 2023-04-25 | Vipergen Aps | Method for screening of an in vitro display library within a cell |
AU2020224663B2 (en) * | 2019-02-21 | 2022-12-08 | F. Hoffmann-La Roche Ag | Methods, compositions, and devices for solid-state synthesis of expandable polymers for use in single molecule sequencing |
WO2020243579A1 (en) | 2019-05-30 | 2020-12-03 | 10X Genomics, Inc. | Methods of detecting spatial heterogeneity of a biological sample |
EP4025711A2 (en) | 2019-11-08 | 2022-07-13 | 10X Genomics, Inc. | Enhancing specificity of analyte binding |
CN112794874A (zh) * | 2019-11-13 | 2021-05-14 | 成都先导药物开发股份有限公司 | 一种On-DNA Petasis反应的合成方法 |
FI3891300T3 (fi) | 2019-12-23 | 2023-05-10 | 10X Genomics Inc | Menetelmät spatiaalista analyysiä varten rna-templatoitua ligaatiota käyttäen |
US11732299B2 (en) | 2020-01-21 | 2023-08-22 | 10X Genomics, Inc. | Spatial assays with perturbed cells |
US11702693B2 (en) | 2020-01-21 | 2023-07-18 | 10X Genomics, Inc. | Methods for printing cells and generating arrays of barcoded cells |
US11898205B2 (en) | 2020-02-03 | 2024-02-13 | 10X Genomics, Inc. | Increasing capture efficiency of spatial assays |
US11732300B2 (en) | 2020-02-05 | 2023-08-22 | 10X Genomics, Inc. | Increasing efficiency of spatial analysis in a biological sample |
US11891654B2 (en) | 2020-02-24 | 2024-02-06 | 10X Genomics, Inc. | Methods of making gene expression libraries |
ES2965354T3 (es) | 2020-04-22 | 2024-04-12 | 10X Genomics Inc | Métodos para análisis espacial que usan eliminación de ARN elegido como diana |
AU2021275906A1 (en) | 2020-05-22 | 2022-12-22 | 10X Genomics, Inc. | Spatial analysis to detect sequence variants |
EP4153775A1 (en) | 2020-05-22 | 2023-03-29 | 10X Genomics, Inc. | Simultaneous spatio-temporal measurement of gene expression and cellular activity |
WO2021242834A1 (en) | 2020-05-26 | 2021-12-02 | 10X Genomics, Inc. | Method for resetting an array |
EP4162074B1 (en) | 2020-06-08 | 2024-04-24 | 10X Genomics, Inc. | Methods of determining a surgical margin and methods of use thereof |
WO2021252591A1 (en) | 2020-06-10 | 2021-12-16 | 10X Genomics, Inc. | Methods for determining a location of an analyte in a biological sample |
CN116034166A (zh) | 2020-06-25 | 2023-04-28 | 10X基因组学有限公司 | Dna甲基化的空间分析 |
US11981960B1 (en) | 2020-07-06 | 2024-05-14 | 10X Genomics, Inc. | Spatial analysis utilizing degradable hydrogels |
US11761038B1 (en) | 2020-07-06 | 2023-09-19 | 10X Genomics, Inc. | Methods for identifying a location of an RNA in a biological sample |
US11981958B1 (en) | 2020-08-20 | 2024-05-14 | 10X Genomics, Inc. | Methods for spatial analysis using DNA capture |
US11926822B1 (en) | 2020-09-23 | 2024-03-12 | 10X Genomics, Inc. | Three-dimensional spatial analysis |
US11827935B1 (en) | 2020-11-19 | 2023-11-28 | 10X Genomics, Inc. | Methods for spatial analysis using rolling circle amplification and detection probes |
WO2022140028A1 (en) | 2020-12-21 | 2022-06-30 | 10X Genomics, Inc. | Methods, compositions, and systems for capturing probes and/or barcodes |
KR20240056484A (ko) * | 2021-06-17 | 2024-04-30 | 인시트로, 인코포레이티드 | 2가 분자 제조 방법 |
EP4196605A1 (en) | 2021-09-01 | 2023-06-21 | 10X Genomics, Inc. | Methods, compositions, and kits for blocking a capture probe on a spatial array |
Family Cites Families (10)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
CA2118806A1 (en) * | 1991-09-18 | 1993-04-01 | William J. Dower | Method of synthesizing diverse collections of oligomers |
US5573905A (en) | 1992-03-30 | 1996-11-12 | The Scripps Research Institute | Encoded combinatorial chemical libraries |
ES2271306T5 (es) | 2001-03-19 | 2013-10-16 | President And Fellows Of Harvard College | Evolución de una nueva función molecular |
EP1402024B1 (en) * | 2001-06-20 | 2007-08-22 | Nuevolution A/S | Templated molecules and methods for using such molecules |
EP2186897B1 (en) | 2002-03-15 | 2016-02-17 | Nuevolution A/S | An improved method for synthesising templated molecules |
EP1540013B1 (en) | 2002-08-19 | 2015-07-08 | The President and Fellows of Harvard College | Evolving new molecular function |
CN106337046B (zh) | 2002-10-30 | 2021-03-23 | 纽韦卢森公司 | 合成双功能复合物的方法 |
DE602004019764D1 (de) * | 2003-03-20 | 2009-04-16 | Nuevolution As | Ligationsvermittelnde codierung von kleinen molekülen |
AU2004299145B2 (en) | 2003-12-17 | 2011-08-25 | Glaxosmithkline Llc | Methods for synthesis of encoded libraries |
DK1828381T3 (da) * | 2004-11-22 | 2009-02-23 | Peter Birk Rasmussen | Templatedirigeret split-and-mix-syntese af småmolekylebiblioteker |
-
2005
- 2005-11-22 DK DK05806601T patent/DK1828381T3/da active
- 2005-11-22 EP EP05806601A patent/EP1828381B1/en not_active Not-in-force
- 2005-11-22 AT AT05806601T patent/ATE420170T1/de not_active IP Right Cessation
- 2005-11-22 WO PCT/DK2005/000747 patent/WO2006053571A2/en active Application Filing
- 2005-11-22 US US11/719,846 patent/US8168381B2/en not_active Expired - Fee Related
- 2005-11-22 DE DE200560012319 patent/DE602005012319D1/de active Active
-
2012
- 2012-04-09 US US13/442,236 patent/US20130237459A1/en not_active Abandoned
-
2013
- 2013-10-30 US US14/067,789 patent/US8951728B2/en not_active Expired - Fee Related
-
2014
- 2014-03-31 US US14/230,896 patent/US20140235509A1/en not_active Abandoned
-
2015
- 2015-01-06 US US14/590,848 patent/US20150126381A1/en not_active Abandoned
- 2015-04-01 US US14/676,381 patent/US20150203841A1/en not_active Abandoned
-
2018
- 2018-01-30 US US15/884,214 patent/US20180163199A1/en not_active Abandoned
- 2018-05-16 US US15/981,854 patent/US20180251756A1/en not_active Abandoned
Also Published As
Publication number | Publication date |
---|---|
WO2006053571A2 (en) | 2006-05-26 |
US20150126381A1 (en) | 2015-05-07 |
WO2006053571A3 (en) | 2006-08-17 |
US20150203841A1 (en) | 2015-07-23 |
US20140235509A1 (en) | 2014-08-21 |
US20090209430A1 (en) | 2009-08-20 |
EP1828381B1 (en) | 2009-01-07 |
DE602005012319D1 (de) | 2009-02-26 |
US20130237459A1 (en) | 2013-09-12 |
EP1828381A2 (en) | 2007-09-05 |
US20140066336A1 (en) | 2014-03-06 |
US20180251756A1 (en) | 2018-09-06 |
ATE420170T1 (de) | 2009-01-15 |
US8168381B2 (en) | 2012-05-01 |
US20180163199A1 (en) | 2018-06-14 |
US8951728B2 (en) | 2015-02-10 |
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