CN102272333A - 利用等位基因特异性抑制序列变体的核酸扩增 - Google Patents
利用等位基因特异性抑制序列变体的核酸扩增 Download PDFInfo
- Publication number
- CN102272333A CN102272333A CN2010800043562A CN201080004356A CN102272333A CN 102272333 A CN102272333 A CN 102272333A CN 2010800043562 A CN2010800043562 A CN 2010800043562A CN 201080004356 A CN201080004356 A CN 201080004356A CN 102272333 A CN102272333 A CN 102272333A
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- Prior art keywords
- oligonucleotide
- target sequence
- nucleic acid
- amplification
- variants
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- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
- C12Q1/6844—Nucleic acid amplification reactions
- C12Q1/6858—Allele-specific amplification
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- Chemical & Material Sciences (AREA)
- Life Sciences & Earth Sciences (AREA)
- Organic Chemistry (AREA)
- Engineering & Computer Science (AREA)
- Zoology (AREA)
- Wood Science & Technology (AREA)
- Proteomics, Peptides & Aminoacids (AREA)
- Health & Medical Sciences (AREA)
- Biophysics (AREA)
- Chemical Kinetics & Catalysis (AREA)
- Immunology (AREA)
- Microbiology (AREA)
- Molecular Biology (AREA)
- Analytical Chemistry (AREA)
- Physics & Mathematics (AREA)
- Biotechnology (AREA)
- Biochemistry (AREA)
- Bioinformatics & Cheminformatics (AREA)
- General Engineering & Computer Science (AREA)
- General Health & Medical Sciences (AREA)
- Genetics & Genomics (AREA)
- Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
- Preparation Of Compounds By Using Micro-Organisms (AREA)
Priority Applications (1)
| Application Number | Priority Date | Filing Date | Title |
|---|---|---|---|
| CN201710109955.4A CN106702000A (zh) | 2009-01-07 | 2010-01-07 | 利用等位基因特异性抑制序列变体的核酸扩增 |
Applications Claiming Priority (3)
| Application Number | Priority Date | Filing Date | Title |
|---|---|---|---|
| US14311309P | 2009-01-07 | 2009-01-07 | |
| US61/143113 | 2009-01-07 | ||
| PCT/EP2010/000030 WO2010079127A1 (en) | 2009-01-07 | 2010-01-07 | Nucleic acid amplification with allele-specific suppression of sequence variants |
Related Child Applications (1)
| Application Number | Title | Priority Date | Filing Date |
|---|---|---|---|
| CN201710109955.4A Division CN106702000A (zh) | 2009-01-07 | 2010-01-07 | 利用等位基因特异性抑制序列变体的核酸扩增 |
Publications (1)
| Publication Number | Publication Date |
|---|---|
| CN102272333A true CN102272333A (zh) | 2011-12-07 |
Family
ID=41682254
Family Applications (2)
| Application Number | Title | Priority Date | Filing Date |
|---|---|---|---|
| CN2010800043562A Pending CN102272333A (zh) | 2009-01-07 | 2010-01-07 | 利用等位基因特异性抑制序列变体的核酸扩增 |
| CN201710109955.4A Pending CN106702000A (zh) | 2009-01-07 | 2010-01-07 | 利用等位基因特异性抑制序列变体的核酸扩增 |
Family Applications After (1)
| Application Number | Title | Priority Date | Filing Date |
|---|---|---|---|
| CN201710109955.4A Pending CN106702000A (zh) | 2009-01-07 | 2010-01-07 | 利用等位基因特异性抑制序列变体的核酸扩增 |
Country Status (7)
| Country | Link |
|---|---|
| US (1) | US8206929B2 (enExample) |
| EP (1) | EP2385991B1 (enExample) |
| JP (1) | JP5785095B2 (enExample) |
| CN (2) | CN102272333A (enExample) |
| CA (1) | CA2747068C (enExample) |
| ES (1) | ES2634428T3 (enExample) |
| WO (1) | WO2010079127A1 (enExample) |
Cited By (1)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| WO2023025218A1 (zh) * | 2021-08-25 | 2023-03-02 | 南京金斯瑞生物科技有限公司 | 一种用于检测单碱基突变的引物组和基因芯片方法 |
Families Citing this family (14)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| ES2665500T3 (es) | 2010-03-08 | 2018-04-26 | Dana-Farber Cancer Institute, Inc. | Enriquecimiento de una PCR por COLD completa con secuencia de bloqueo de referencia |
| EP2691541B1 (en) | 2011-03-31 | 2017-10-18 | Dana-Farber Cancer Institute, Inc. | Method for enriching in single-stranded mutant sequences from mixture of wild-type and mutant sequences |
| EP2744916A4 (en) | 2011-07-13 | 2015-06-17 | Primeradx Inc | MULTIMODAL PROCEDURE FOR THE SIMULTANEOUS DETECTION AND QUANTIFICATION OF MULTIPLE NUCLEIC ACIDS IN ONE SAMPLE |
| GB201116876D0 (en) | 2011-09-30 | 2011-11-16 | Epistem Ltd | Mutational analysis of JAK2 |
| AU2014200958B2 (en) | 2013-02-25 | 2016-01-14 | Seegene, Inc. | Detection of nucleotide variation on target nucleic acid sequence |
| WO2015008985A1 (en) | 2013-07-15 | 2015-01-22 | Seegene, Inc. | Detection of target nucleic acid sequence by pto cleavage and extension-dependent immobilized oligonucleotide hybridization |
| US10913977B2 (en) | 2013-07-24 | 2021-02-09 | Dana-Farber Cancer Institute, Inc. | Methods and compositions to enable enrichment of minor DNA alleles by limiting denaturation time in PCR or simply enable enrichment of minor DNA alleles by limiting the denaturation time in PCR |
| WO2015057008A2 (en) | 2013-10-18 | 2015-04-23 | Seegene, Inc. | Detection of target nucleic acid sequence on solid phase by pto cleavage and extension using hcto assay |
| JP2016535987A (ja) | 2013-10-20 | 2016-11-24 | トローバジーン インコーポレイテッド | 核酸配列の合成及び濃縮 |
| WO2015179339A1 (en) * | 2014-05-19 | 2015-11-26 | William Marsh Rice University | Allele-specific amplification using a composition of overlapping non-allele-specific primer and allele-specific blocker oligonucleotides |
| JP5813263B1 (ja) * | 2015-03-31 | 2015-11-17 | 日鉄住金環境株式会社 | 遺伝子変異の検出方法及びそれに用いる蛍光標識オリゴヌクレオチド |
| US11371090B2 (en) | 2016-12-12 | 2022-06-28 | Dana-Farber Cancer Institute, Inc. | Compositions and methods for molecular barcoding of DNA molecules prior to mutation enrichment and/or mutation detection |
| US11174511B2 (en) | 2017-07-24 | 2021-11-16 | Dana-Farber Cancer Institute, Inc. | Methods and compositions for selecting and amplifying DNA targets in a single reaction mixture |
| JP2024531713A (ja) * | 2021-09-13 | 2024-08-29 | ネクスジェン キャンサー ディテクション エルエルシー | 試料中の標的ポリヌクレオチドを検出するための方法 |
Citations (1)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| US20080176226A1 (en) * | 2007-01-19 | 2008-07-24 | Chang Gung University | Methods and kits for the detection of nucleotide mutations using peptide nucleic acid as both pcr clamp and sensor probe |
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| US4469863A (en) | 1980-11-12 | 1984-09-04 | Ts O Paul O P | Nonionic nucleic acid alkyl and aryl phosphonates and processes for manufacture and use thereof |
| US5235033A (en) | 1985-03-15 | 1993-08-10 | Anti-Gene Development Group | Alpha-morpholino ribonucleoside derivatives and polymers thereof |
| US5034506A (en) | 1985-03-15 | 1991-07-23 | Anti-Gene Development Group | Uncharged morpholino-based polymers having achiral intersubunit linkages |
| DE3529478A1 (de) | 1985-08-16 | 1987-02-19 | Boehringer Mannheim Gmbh | 7-desaza-2'desoxyguanosin-nukleotide, verfahren zu deren herstellung und deren verwendung zur nukleinsaeure-sequenzierung |
| US5374553A (en) | 1986-08-22 | 1994-12-20 | Hoffmann-La Roche Inc. | DNA encoding a thermostable nucleic acid polymerase enzyme from thermotoga maritima |
| US5455170A (en) | 1986-08-22 | 1995-10-03 | Hoffmann-La Roche Inc. | Mutated thermostable nucleic acid polymerase enzyme from Thermus species Z05 |
| US5405774A (en) | 1986-08-22 | 1995-04-11 | Hoffmann-La Roche Inc. | DNA encoding a mutated thermostable nucleic acid polymerase enzyme from thermus species sps17 |
| US5795762A (en) | 1986-08-22 | 1998-08-18 | Roche Molecular Systems, Inc. | 5' to 3' exonuclease mutations of thermostable DNA polymerases |
| US5466591A (en) | 1986-08-22 | 1995-11-14 | Hoffmann-La Roche Inc. | 5' to 3' exonuclease mutations of thermostable DNA polymerases |
| US5216141A (en) | 1988-06-06 | 1993-06-01 | Benner Steven A | Oligonucleotide analogs containing sulfur linkages |
| US5386023A (en) | 1990-07-27 | 1995-01-31 | Isis Pharmaceuticals | Backbone modified oligonucleotide analogs and preparation thereof through reductive coupling |
| US5602240A (en) | 1990-07-27 | 1997-02-11 | Ciba Geigy Ag. | Backbone modified oligonucleotide analogs |
| US5210015A (en) | 1990-08-06 | 1993-05-11 | Hoffman-La Roche Inc. | Homogeneous assay system using the nuclease activity of a nucleic acid polymerase |
| JP2582980B2 (ja) | 1990-09-28 | 1997-02-19 | エフ.ホフマン−ラ ロシュ アクチェンゲゼルシャフト | モルモシポ・アフリカヌスからの純化された熱安定性核酸ポリメラーゼ |
| JPH04234422A (ja) | 1990-10-31 | 1992-08-24 | Internatl Business Mach Corp <Ibm> | 二重硬化エポキシバックシール処方物 |
| AU3222793A (en) | 1991-11-26 | 1993-06-28 | Gilead Sciences, Inc. | Enhanced triple-helix and double-helix formation with oligomers containing modified pyrimidines |
| TW393513B (en) | 1991-11-26 | 2000-06-11 | Isis Pharmaceuticals Inc | Enhanced triple-helix and double-helix formation with oligomers containing modified pyrimidines |
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| US5644048A (en) | 1992-01-10 | 1997-07-01 | Isis Pharmaceuticals, Inc. | Process for preparing phosphorothioate oligonucleotides |
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| US5637684A (en) | 1994-02-23 | 1997-06-10 | Isis Pharmaceuticals, Inc. | Phosphoramidate and phosphorothioamidate oligomeric compounds |
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| US6174670B1 (en) | 1996-06-04 | 2001-01-16 | University Of Utah Research Foundation | Monitoring amplification of DNA during PCR |
| DE69827060T2 (de) * | 1997-03-20 | 2005-03-24 | F. Hoffmann-La Roche Ag | Modifizierte Primer |
| US5849497A (en) * | 1997-04-03 | 1998-12-15 | The Research Foundation Of State University Of New York | Specific inhibition of the polymerase chain reaction using a non-extendable oligonucleotide blocker |
| US6228628B1 (en) | 1997-07-09 | 2001-05-08 | Roche Molecular Systems | Mutant chimeric DNA polymerase |
| JP3274396B2 (ja) | 1997-11-07 | 2002-04-15 | 株式会社東芝 | パターン測定方法 |
| CN100432237C (zh) * | 1999-03-19 | 2008-11-12 | 宝生物工程株式会社 | 用于扩增核酸序列的方法 |
| AU3418800A (en) | 1999-03-24 | 2000-10-09 | Exiqon A/S | Improved synthesis of (2.2.1)bicyclo nucleosides |
| JP4643023B2 (ja) | 1999-05-04 | 2011-03-02 | オルソ−クリニカル ダイアグノスティクス,インコーポレイティド | 細胞溶解剤を使用せずに試料からdnaを迅速に効率よく捕捉する方法 |
| KR100735131B1 (ko) * | 2000-08-23 | 2007-07-03 | 다카라 바이오 가부시키가이샤 | 핵산 증폭 방법 |
| US6479242B1 (en) * | 2000-10-26 | 2002-11-12 | Cleveland State University | Method for genotyping of single nucleotide polymorphism |
| GB0101397D0 (en) * | 2001-01-19 | 2001-03-07 | Amersham Pharm Biotech Uk Ltd | Suppression of non-specific nucleic acid amplication |
| EP1253205A1 (en) | 2001-04-24 | 2002-10-30 | LION Bioscience AG | Method of blocking amplification of selected sequences |
| US7198897B2 (en) * | 2001-12-19 | 2007-04-03 | Brandeis University | Late-PCR |
| EP1934374B1 (en) * | 2005-10-05 | 2011-08-10 | Roche Diagnostics GmbH | Non-fluorescent energy transfer |
| US8071338B2 (en) * | 2007-08-08 | 2011-12-06 | Roche Molecular Systems, Inc. | Suppression of amplification using an oligonucleotide and a polymerase significantly lacking 5′-3′ nuclease activity |
| ES2408654T3 (es) | 2008-07-02 | 2013-06-21 | Avexa Limited | Tiazopirimidinonas y uso de las mismas |
-
2010
- 2010-01-06 US US12/683,111 patent/US8206929B2/en active Active
- 2010-01-07 WO PCT/EP2010/000030 patent/WO2010079127A1/en not_active Ceased
- 2010-01-07 ES ES10700205.7T patent/ES2634428T3/es active Active
- 2010-01-07 JP JP2011544052A patent/JP5785095B2/ja active Active
- 2010-01-07 CA CA2747068A patent/CA2747068C/en active Active
- 2010-01-07 CN CN2010800043562A patent/CN102272333A/zh active Pending
- 2010-01-07 EP EP10700205.7A patent/EP2385991B1/en active Active
- 2010-01-07 CN CN201710109955.4A patent/CN106702000A/zh active Pending
Patent Citations (1)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| US20080176226A1 (en) * | 2007-01-19 | 2008-07-24 | Chang Gung University | Methods and kits for the detection of nucleotide mutations using peptide nucleic acid as both pcr clamp and sensor probe |
Non-Patent Citations (1)
| Title |
|---|
| YU D, MUKAI M, LIU Q, STEINMAN CR: "Specific inhibition of PCR by non-extendable oligonucleotides using a 5" to 3" exonuclease-deficient DNA polymerase", 《BIOTECHNIQUES》 * |
Cited By (1)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| WO2023025218A1 (zh) * | 2021-08-25 | 2023-03-02 | 南京金斯瑞生物科技有限公司 | 一种用于检测单碱基突变的引物组和基因芯片方法 |
Also Published As
| Publication number | Publication date |
|---|---|
| WO2010079127A1 (en) | 2010-07-15 |
| US8206929B2 (en) | 2012-06-26 |
| EP2385991B1 (en) | 2017-05-17 |
| CA2747068A1 (en) | 2010-07-15 |
| JP5785095B2 (ja) | 2015-09-24 |
| CA2747068C (en) | 2014-04-08 |
| JP2012514451A (ja) | 2012-06-28 |
| ES2634428T3 (es) | 2017-09-27 |
| US20100173311A1 (en) | 2010-07-08 |
| EP2385991A1 (en) | 2011-11-16 |
| CN106702000A (zh) | 2017-05-24 |
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