CA2670300C - Improved method for the prevention of carryover contamination in nucleic acid amplification technologies - Google Patents

Improved method for the prevention of carryover contamination in nucleic acid amplification technologies Download PDF

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Publication number
CA2670300C
CA2670300C CA2670300A CA2670300A CA2670300C CA 2670300 C CA2670300 C CA 2670300C CA 2670300 A CA2670300 A CA 2670300A CA 2670300 A CA2670300 A CA 2670300A CA 2670300 C CA2670300 C CA 2670300C
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CA
Canada
Prior art keywords
dna
ung
amplification
abasic
spermine
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Expired - Fee Related
Application number
CA2670300A
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English (en)
French (fr)
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CA2670300A1 (en
Inventor
Roy Bohensky
Amar Gupta
Janine Montiel
Stephen Gordon Will
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F Hoffmann La Roche AG
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F Hoffmann La Roche AG
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Publication of CA2670300A1 publication Critical patent/CA2670300A1/en
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Publication of CA2670300C publication Critical patent/CA2670300C/en
Expired - Fee Related legal-status Critical Current
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    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6844Nucleic acid amplification reactions
    • C12Q1/6848Nucleic acid amplification reactions characterised by the means for preventing contamination or increasing the specificity or sensitivity of an amplification reaction

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  • Chemical & Material Sciences (AREA)
  • Organic Chemistry (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Chemical Kinetics & Catalysis (AREA)
  • Zoology (AREA)
  • Wood Science & Technology (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Health & Medical Sciences (AREA)
  • Engineering & Computer Science (AREA)
  • Biophysics (AREA)
  • Immunology (AREA)
  • Microbiology (AREA)
  • Molecular Biology (AREA)
  • Biotechnology (AREA)
  • Analytical Chemistry (AREA)
  • Physics & Mathematics (AREA)
  • Biochemistry (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • General Engineering & Computer Science (AREA)
  • General Health & Medical Sciences (AREA)
  • Genetics & Genomics (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
CA2670300A 2008-06-26 2009-06-25 Improved method for the prevention of carryover contamination in nucleic acid amplification technologies Expired - Fee Related CA2670300C (en)

Applications Claiming Priority (2)

Application Number Priority Date Filing Date Title
US7611108P 2008-06-26 2008-06-26
US61/076,111 2008-06-26

Publications (2)

Publication Number Publication Date
CA2670300A1 CA2670300A1 (en) 2009-12-26
CA2670300C true CA2670300C (en) 2014-12-09

Family

ID=41136785

Family Applications (1)

Application Number Title Priority Date Filing Date
CA2670300A Expired - Fee Related CA2670300C (en) 2008-06-26 2009-06-25 Improved method for the prevention of carryover contamination in nucleic acid amplification technologies

Country Status (6)

Country Link
US (1) US8669061B2 (cg-RX-API-DMAC7.html)
EP (1) EP2138590B1 (cg-RX-API-DMAC7.html)
JP (1) JP5596308B2 (cg-RX-API-DMAC7.html)
CN (1) CN101613730B (cg-RX-API-DMAC7.html)
CA (1) CA2670300C (cg-RX-API-DMAC7.html)
ES (1) ES2386023T3 (cg-RX-API-DMAC7.html)

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* Cited by examiner, † Cited by third party
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US8669061B2 (en) 2008-06-26 2014-03-11 Roche Molecular Systems, Inc. Method for the prevention of carryover contamination in nucleic acid amplification technologies
US20150024398A1 (en) * 2011-08-05 2015-01-22 Ibis Biosciences, Inc. Analysis of genetic biomarkers for forensic analysis and fingerprinting
ES2449665B2 (es) * 2012-09-19 2014-07-17 Servizo Galego De Saúde-Conselleria De Sanidade, Xunta De Galicia Procedimiento para el diagnóstico clínico de una enfermedad infecciosa basada en el empleo de la PCR cuantitativa, oligonucleótidos marcados de 8 a 9 nucleótidos de longitud y la UNG del Bacalao del Atlántico (Gadus morhua).
CA2930942A1 (en) * 2013-11-18 2015-05-21 Rubicon Genomics, Inc. Degradable adaptors for background reduction
US10036061B2 (en) 2013-12-20 2018-07-31 Roche Molecular Systems, Inc. Oligonucleotide inhibitor of DNA polymerases
US10323273B2 (en) 2014-06-05 2019-06-18 Qiagen Gmbh Optimization of DNA amplification reactions
ES2904909T3 (es) 2014-10-08 2022-04-06 Univ Cornell Método para la identificación y la cuantificación relativa de cambios en la expresión de secuencias de ácidos nucleicos, en variantes de corte y empalme, en la translocación, en el número de copias o en la metilación utilizando reacciones combinadas de nucleasa, de ligadura y de polimerasa con prevención de arrastre
CN104389026A (zh) * 2014-10-30 2015-03-04 北京诺禾致源生物信息科技有限公司 单细胞转录组测序文库的构建方法及其应用
WO2017043114A1 (ja) * 2015-09-07 2017-03-16 株式会社ファスマック 等温増幅反応産物の多項目同時検出方法
EP3485038B1 (en) 2016-07-12 2020-12-23 H. Hoffnabb-La Roche Ag Primer extension target enrichment
ES2875318T3 (es) 2016-07-18 2021-11-10 Hoffmann La Roche Procedimiento para generar colecciones de ADN circular monocatenario para secuenciación de molécula única
JP2021506314A (ja) 2017-12-21 2021-02-22 エフ.ホフマン−ラ ロシュ アーゲーF. Hoffmann−La Roche Aktiengesellschaft 単一方向デュアルプローブプライマー伸長による標的濃縮
US20220251580A1 (en) * 2019-05-07 2022-08-11 Institute Of Genetics And Developmental Biology, Chinese Academy Of Sciences Improved gene editing system
EP4031679A1 (en) 2019-09-20 2022-07-27 F. Hoffmann-La Roche AG Immune repertoire profiling by primer extension target enrichment
US20230287508A1 (en) 2020-06-08 2023-09-14 Roche Sequencing Solutions, Inc. Methods and compositions for detecting structural rearrangements in a genome
CN113186037B (zh) * 2021-04-23 2022-12-13 山东博弘基因科技有限公司 一种核酸清除剂
JP2024538122A (ja) * 2021-10-15 2024-10-18 キアゲン サイエンシーズ リミテッド ライアビリティ カンパニー Dnaライブラリを作製するための方法およびその使用
CN114214395A (zh) * 2021-12-31 2022-03-22 上海星耀医学科技发展有限公司 一种提高基因检测准确性的核酸扩增方法与试剂盒
CN119546776A (zh) 2022-07-14 2025-02-28 豪夫迈·罗氏有限公司 通过单向双重探针引物延伸进行的变异等位基因富集
CN116773291B (zh) * 2023-03-31 2024-04-19 艾普拜生物科技(苏州)有限公司 一种石蜡切片dna预处理试剂及方法
WO2024222446A1 (zh) * 2023-04-23 2024-10-31 南京诺唯赞生物科技股份有限公司 一种去除非目标核酸模板的方法

Family Cites Families (17)

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Publication number Priority date Publication date Assignee Title
JPH089997B2 (ja) 1987-05-26 1996-01-31 日立冷熱株式会社 多翼送風機
US5683896A (en) 1989-06-01 1997-11-04 Life Technologies, Inc. Process for controlling contamination of nucleic acid amplification reactions
ATE176002T1 (de) * 1990-07-24 1999-02-15 Hoffmann La Roche Verringerung von nicht spezifischer amplifikation während einer (in vitro) nukleinsäure amplifikation unter verwendung von modifizierten nukleinsäure basen
CA2073298C (en) * 1991-07-12 2007-04-17 James L. Hartley Process for controlling contamination of nucleic acid amplification reactions
JP3416981B2 (ja) 1993-03-30 2003-06-16 株式会社島津製作所 核酸合成法
JPH089997A (ja) 1994-06-28 1996-01-16 Shimadzu Corp 核酸合成法およびそれに用いる試薬キット
US6413747B1 (en) 1994-10-03 2002-07-02 Shimadzu Corporation Enhancement of nucleic acid amplification by the addition of a polyamine
US6190865B1 (en) * 1995-09-27 2001-02-20 Epicentre Technologies Corporation Method for characterizing nucleic acid molecules
DE19545320A1 (de) 1995-12-05 1997-06-12 Boehringer Mannheim Gmbh Thermolabile Uracil-DNA-Glykosylase, Verfahren zu deren Herstellung und Verwendung zur Entfernung von Uracil aus DNA
GB9600384D0 (en) 1996-01-09 1996-03-13 Nyfotek As Dna glycosylases
JP4629167B2 (ja) 1997-10-17 2011-02-09 株式会社島津製作所 核酸合成法
EP1041159A3 (de) 1999-03-26 2000-10-25 MIRA Diagnostika GmbH Verfahren, Oligonucleotide zum Abbau von in-vitro synthetisierten Nucleinsäuremolekülen
EP1038974A1 (de) 1999-03-26 2000-09-27 Mira Diagnostica GmbH Verfahren, Oligonucleotide zum Abbau von in-vitro synthetisierten Nucleinsäuremolekülen
JP2001008680A (ja) 1999-06-30 2001-01-16 Shimadzu Corp 核酸合成法
US20040152094A1 (en) 2001-05-10 2004-08-05 Steffen Danielsen Method for producing recombined polynucleotides
EP2038429B1 (en) * 2006-06-30 2013-08-21 Nugen Technologies, Inc. Methods for fragmentation and labeling of nucleic acids
US8669061B2 (en) 2008-06-26 2014-03-11 Roche Molecular Systems, Inc. Method for the prevention of carryover contamination in nucleic acid amplification technologies

Also Published As

Publication number Publication date
JP2010004884A (ja) 2010-01-14
EP2138590A1 (en) 2009-12-30
HK1138330A1 (en) 2010-08-20
EP2138590B1 (en) 2012-05-30
US8669061B2 (en) 2014-03-11
CN101613730B (zh) 2014-06-04
JP5596308B2 (ja) 2014-09-24
CN101613730A (zh) 2009-12-30
US20100093041A1 (en) 2010-04-15
CA2670300A1 (en) 2009-12-26
ES2386023T3 (es) 2012-08-07

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Effective date: 20140408

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Effective date: 20190625