AU2008217678B9 - Method and test kit for determining the amounts of target sequences and nucleotide variations therein - Google Patents
Method and test kit for determining the amounts of target sequences and nucleotide variations therein Download PDFInfo
- Publication number
- AU2008217678B9 AU2008217678B9 AU2008217678A AU2008217678A AU2008217678B9 AU 2008217678 B9 AU2008217678 B9 AU 2008217678B9 AU 2008217678 A AU2008217678 A AU 2008217678A AU 2008217678 A AU2008217678 A AU 2008217678A AU 2008217678 B9 AU2008217678 B9 AU 2008217678B9
- Authority
- AU
- Australia
- Prior art keywords
- target
- targets
- probes
- detector
- probe
- Prior art date
- Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
- Ceased
Links
Classifications
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
- C12Q1/6813—Hybridisation assays
- C12Q1/6827—Hybridisation assays for detection of mutation or polymorphism
Landscapes
- Chemical & Material Sciences (AREA)
- Organic Chemistry (AREA)
- Life Sciences & Earth Sciences (AREA)
- Zoology (AREA)
- Wood Science & Technology (AREA)
- Proteomics, Peptides & Aminoacids (AREA)
- Health & Medical Sciences (AREA)
- Engineering & Computer Science (AREA)
- Microbiology (AREA)
- Immunology (AREA)
- Physics & Mathematics (AREA)
- Molecular Biology (AREA)
- Biotechnology (AREA)
- Biophysics (AREA)
- Analytical Chemistry (AREA)
- Biochemistry (AREA)
- Bioinformatics & Cheminformatics (AREA)
- General Engineering & Computer Science (AREA)
- General Health & Medical Sciences (AREA)
- Genetics & Genomics (AREA)
- Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
Applications Claiming Priority (3)
Application Number | Priority Date | Filing Date | Title |
---|---|---|---|
FI20075124 | 2007-02-21 | ||
FI20075124A FI20075124A0 (sv) | 2007-02-21 | 2007-02-21 | Förfarande och test kit för detektering av nukleotidvariationer |
PCT/FI2008/050074 WO2008102057A1 (en) | 2007-02-21 | 2008-02-20 | Method and test kit for determining the amounts of target sequences and nucleotide variations therein |
Publications (3)
Publication Number | Publication Date |
---|---|
AU2008217678A1 AU2008217678A1 (en) | 2008-08-28 |
AU2008217678B2 AU2008217678B2 (en) | 2013-09-12 |
AU2008217678B9 true AU2008217678B9 (en) | 2013-10-03 |
Family
ID=37832273
Family Applications (1)
Application Number | Title | Priority Date | Filing Date |
---|---|---|---|
AU2008217678A Ceased AU2008217678B9 (en) | 2007-02-21 | 2008-02-20 | Method and test kit for determining the amounts of target sequences and nucleotide variations therein |
Country Status (6)
Country | Link |
---|---|
EP (1) | EP2126122A4 (sv) |
JP (1) | JP2010518846A (sv) |
AU (1) | AU2008217678B9 (sv) |
CA (1) | CA2678693A1 (sv) |
FI (1) | FI20075124A0 (sv) |
WO (1) | WO2008102057A1 (sv) |
Families Citing this family (55)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
US9029085B2 (en) | 2007-03-07 | 2015-05-12 | President And Fellows Of Harvard College | Assays and other reactions involving droplets |
US9797010B2 (en) | 2007-12-21 | 2017-10-24 | President And Fellows Of Harvard College | Systems and methods for nucleic acid sequencing |
US20110218123A1 (en) | 2008-09-19 | 2011-09-08 | President And Fellows Of Harvard College | Creation of libraries of droplets and related species |
US8748094B2 (en) | 2008-12-19 | 2014-06-10 | President And Fellows Of Harvard College | Particle-assisted nucleic acid sequencing |
EP3842150A1 (en) | 2009-10-27 | 2021-06-30 | President and Fellows of Harvard College | Droplet creation techniques |
WO2012096430A1 (en) | 2011-01-11 | 2012-07-19 | Seegene, Inc. | Detection of target nucleic acid sequences by pto cleavage and extension assay |
US11078525B2 (en) | 2011-03-29 | 2021-08-03 | Seegene, Inc. | Detection of target nucleic acid sequence by PTO cleavage and extension-dependent cleavage |
US9850524B2 (en) | 2011-05-04 | 2017-12-26 | Seegene, Inc. | Detection of target nucleic acid sequences by PO cleavage and hybridization |
KR20130101952A (ko) | 2012-02-02 | 2013-09-16 | 주식회사 씨젠 | Pto 절단과 연장-의존적 혼성화를 이용한 타겟 핵산서열의 검출 |
US9650665B2 (en) * | 2012-03-05 | 2017-05-16 | Seegene, Inc. | Detection of nucleotide variation on target nucleic acid sequence by PTO cleavage and extension assay |
US10221442B2 (en) | 2012-08-14 | 2019-03-05 | 10X Genomics, Inc. | Compositions and methods for sample processing |
US10323279B2 (en) | 2012-08-14 | 2019-06-18 | 10X Genomics, Inc. | Methods and systems for processing polynucleotides |
US10273541B2 (en) | 2012-08-14 | 2019-04-30 | 10X Genomics, Inc. | Methods and systems for processing polynucleotides |
US10400280B2 (en) | 2012-08-14 | 2019-09-03 | 10X Genomics, Inc. | Methods and systems for processing polynucleotides |
US11591637B2 (en) | 2012-08-14 | 2023-02-28 | 10X Genomics, Inc. | Compositions and methods for sample processing |
US9951386B2 (en) | 2014-06-26 | 2018-04-24 | 10X Genomics, Inc. | Methods and systems for processing polynucleotides |
BR112015003354A8 (pt) | 2012-08-14 | 2018-01-16 | 10X Genomics Inc | métodos e composições de microcápsula |
US10752949B2 (en) | 2012-08-14 | 2020-08-25 | 10X Genomics, Inc. | Methods and systems for processing polynucleotides |
US9701998B2 (en) | 2012-12-14 | 2017-07-11 | 10X Genomics, Inc. | Methods and systems for processing polynucleotides |
US10533221B2 (en) | 2012-12-14 | 2020-01-14 | 10X Genomics, Inc. | Methods and systems for processing polynucleotides |
CA2894694C (en) | 2012-12-14 | 2023-04-25 | 10X Genomics, Inc. | Methods and systems for processing polynucleotides |
WO2014124336A2 (en) | 2013-02-08 | 2014-08-14 | 10X Technologies, Inc. | Partitioning and processing of analytes and other species |
ES2662825T3 (es) * | 2013-02-25 | 2018-04-09 | Seegene, Inc. | Detección de variación de nucleótido en una secuencia de ácidos nucleicos diana |
US10395758B2 (en) | 2013-08-30 | 2019-08-27 | 10X Genomics, Inc. | Sequencing methods |
US20160279068A1 (en) | 2013-11-08 | 2016-09-29 | President And Fellows Of Harvard College | Microparticles, methods for their preparation and use |
US9824068B2 (en) | 2013-12-16 | 2017-11-21 | 10X Genomics, Inc. | Methods and apparatus for sorting data |
CN110548550B (zh) | 2014-04-10 | 2022-03-08 | 10X基因组学有限公司 | 用于封装和分割试剂的流体装置、系统和方法及其应用 |
CA2953374A1 (en) | 2014-06-26 | 2015-12-30 | 10X Genomics, Inc. | Methods of analyzing nucleic acids from individual cells or cell populations |
MX2016016713A (es) | 2014-06-26 | 2017-05-23 | 10X Genomics Inc | Procesos y sistemas para el montaje de secuencias de acido nucleico. |
AU2015339148B2 (en) | 2014-10-29 | 2022-03-10 | 10X Genomics, Inc. | Methods and compositions for targeted nucleic acid sequencing |
US9975122B2 (en) | 2014-11-05 | 2018-05-22 | 10X Genomics, Inc. | Instrument systems for integrated sample processing |
MX367432B (es) | 2015-01-12 | 2019-08-08 | 10X Genomics Inc | Procesos y sistemas para la preparación de bibliotecas de secuenciación de ácido nucleico y bibliotecas preparadas con estos. |
EP3245605B1 (en) | 2015-01-13 | 2022-04-20 | 10X Genomics, Inc. | Systems and methods for visualizing structural variation and phasing information |
EP3256606B1 (en) | 2015-02-09 | 2019-05-22 | 10X Genomics, Inc. | Systems and methods for determining structural variation |
EP3259356B1 (en) * | 2015-02-20 | 2021-12-01 | Rosalind Franklin University of Medicine and Science | Antisense compounds targeting genes associated with cystic fibrosis |
US10525076B2 (en) | 2015-02-20 | 2020-01-07 | Rosalind Franklin University Of Medicine And Science | Antisense compounds targeting genes associated with cystic fibrosis |
CA2975958A1 (en) | 2015-02-24 | 2016-09-01 | 10X Genomics, Inc. | Methods for targeted nucleic acid sequence coverage |
EP4286516A3 (en) | 2015-02-24 | 2024-03-06 | 10X Genomics, Inc. | Partition processing methods and systems |
CN108289797B (zh) | 2015-10-13 | 2022-01-28 | 哈佛学院院长及董事 | 用于制备和使用凝胶微球的系统和方法 |
SG11201804086VA (en) | 2015-12-04 | 2018-06-28 | 10X Genomics Inc | Methods and compositions for nucleic acid analysis |
CN107024583B (zh) * | 2016-01-29 | 2019-03-08 | 中国科学院苏州纳米技术与纳米仿生研究所 | 硫黄素t适配体、其筛选方法及应用 |
CN108779491B (zh) | 2016-02-11 | 2021-03-09 | 10X基因组学有限公司 | 用于全基因组序列数据的从头组装的系统、方法和介质 |
WO2017197338A1 (en) | 2016-05-13 | 2017-11-16 | 10X Genomics, Inc. | Microfluidic systems and methods of use |
US10011872B1 (en) | 2016-12-22 | 2018-07-03 | 10X Genomics, Inc. | Methods and systems for processing polynucleotides |
US10815525B2 (en) | 2016-12-22 | 2020-10-27 | 10X Genomics, Inc. | Methods and systems for processing polynucleotides |
US10550429B2 (en) | 2016-12-22 | 2020-02-04 | 10X Genomics, Inc. | Methods and systems for processing polynucleotides |
EP4310183A3 (en) | 2017-01-30 | 2024-02-21 | 10X Genomics, Inc. | Methods and systems for droplet-based single cell barcoding |
EP3625715A4 (en) | 2017-05-19 | 2021-03-17 | 10X Genomics, Inc. | DATA SET ANALYSIS SYSTEMS AND METHODS |
US20180340169A1 (en) | 2017-05-26 | 2018-11-29 | 10X Genomics, Inc. | Single cell analysis of transposase accessible chromatin |
EP4230746A3 (en) | 2017-05-26 | 2023-11-01 | 10X Genomics, Inc. | Single cell analysis of transposase accessible chromatin |
WO2019066461A2 (en) | 2017-09-29 | 2019-04-04 | Seegene, Inc. | DETECTION OF TARGET NUCLEIC ACID SEQUENCES BY CLEAVAGE ANALYSIS AND EXTENSION OF PTO |
EP3625361A1 (en) | 2017-11-15 | 2020-03-25 | 10X Genomics, Inc. | Functionalized gel beads |
US10829815B2 (en) | 2017-11-17 | 2020-11-10 | 10X Genomics, Inc. | Methods and systems for associating physical and genetic properties of biological particles |
WO2019195166A1 (en) | 2018-04-06 | 2019-10-10 | 10X Genomics, Inc. | Systems and methods for quality control in single cell processing |
AU2022256039A1 (en) * | 2021-04-07 | 2023-11-02 | University Of Massachusetts | Specific oligonucleotide-programmed readthrough of nonsense codons |
Citations (1)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
WO2002055734A1 (en) * | 2001-01-10 | 2002-07-18 | Valtion Teknillinen Tutkimuskeskus | A method and test kit for quantitative determination of variations in polynucleotide amounts in cell or tissue samples |
Family Cites Families (13)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
US6013431A (en) * | 1990-02-16 | 2000-01-11 | Molecular Tool, Inc. | Method for determining specific nucleotide variations by primer extension in the presence of mixture of labeled nucleotides and terminators |
WO1993004199A2 (en) * | 1991-08-20 | 1993-03-04 | Scientific Generics Limited | Methods of detecting or quantitating nucleic acids and of producing labelled immobilised nucleic acids |
BR9206705A (pt) * | 1991-11-01 | 1995-11-21 | Adelaide Children S Hospital | Processo de amplificação de fase sólida |
JP2775346B2 (ja) * | 1992-04-03 | 1998-07-16 | アプライド バイオシステムズ,インコーポレイテッド | プローブ構成物および方法 |
ATE375403T1 (de) * | 1996-11-06 | 2007-10-15 | Sequenom Inc | Dna-diagnostik mittels massenspektrometrie |
AU1623899A (en) * | 1997-12-04 | 1999-06-16 | Packard Bioscience Company | Methods of using probes for analyzing polynucleotide sequence |
US6635419B1 (en) * | 1999-02-16 | 2003-10-21 | Applera Corporation | Polynucleotide sequencing method |
JP2003527075A (ja) * | 1999-03-25 | 2003-09-16 | ハイセック,インコーポレーテッド | ハイブリダイゼーションによる配列分析のための、溶液ベースの方法 |
JP2001245698A (ja) * | 1999-11-22 | 2001-09-11 | Xiao Bing Wang | 核酸検出法 |
US20030077584A1 (en) * | 2001-08-28 | 2003-04-24 | Mark Kunkel | Methods and compositons for bi-directional polymorphism detection |
JP3752466B2 (ja) * | 2002-04-24 | 2006-03-08 | 株式会社日立製作所 | 遺伝子検査方法 |
DE60335116D1 (de) * | 2002-06-28 | 2011-01-05 | Primeradx Inc | Verfahren zum nachweis von sequenzunterschieden |
FI20021325A0 (sv) * | 2002-07-05 | 2002-07-05 | Valtion Teknillinen | Förfarande och test kit för bestämning av mängden enskilda nukleotider i en blandning |
-
2007
- 2007-02-21 FI FI20075124A patent/FI20075124A0/sv unknown
-
2008
- 2008-02-20 JP JP2009550736A patent/JP2010518846A/ja active Pending
- 2008-02-20 CA CA002678693A patent/CA2678693A1/en not_active Abandoned
- 2008-02-20 EP EP08718527A patent/EP2126122A4/en not_active Withdrawn
- 2008-02-20 AU AU2008217678A patent/AU2008217678B9/en not_active Ceased
- 2008-02-20 WO PCT/FI2008/050074 patent/WO2008102057A1/en active Application Filing
Patent Citations (1)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
WO2002055734A1 (en) * | 2001-01-10 | 2002-07-18 | Valtion Teknillinen Tutkimuskeskus | A method and test kit for quantitative determination of variations in polynucleotide amounts in cell or tissue samples |
Also Published As
Publication number | Publication date |
---|---|
AU2008217678A1 (en) | 2008-08-28 |
AU2008217678B2 (en) | 2013-09-12 |
WO2008102057A1 (en) | 2008-08-28 |
JP2010518846A (ja) | 2010-06-03 |
WO2008102057A9 (en) | 2008-10-09 |
FI20075124A0 (sv) | 2007-02-21 |
EP2126122A4 (en) | 2010-11-10 |
EP2126122A1 (en) | 2009-12-02 |
CA2678693A1 (en) | 2008-08-28 |
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Legal Events
Date | Code | Title | Description |
---|---|---|---|
SREP | Specification republished | ||
FGA | Letters patent sealed or granted (standard patent) | ||
MK14 | Patent ceased section 143(a) (annual fees not paid) or expired |