SG191725A1 - Nucleic acid target detection using a detector, a probe and an inhibitor - Google Patents
Nucleic acid target detection using a detector, a probe and an inhibitor Download PDFInfo
- Publication number
- SG191725A1 SG191725A1 SG2013043880A SG2013043880A SG191725A1 SG 191725 A1 SG191725 A1 SG 191725A1 SG 2013043880 A SG2013043880 A SG 2013043880A SG 2013043880 A SG2013043880 A SG 2013043880A SG 191725 A1 SG191725 A1 SG 191725A1
- Authority
- SG
- Singapore
- Prior art keywords
- nucleic acid
- inhibitor
- detector
- target nucleic
- fluorophore
- Prior art date
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Classifications
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- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
- C12Q1/6844—Nucleic acid amplification reactions
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- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
- C12Q1/6813—Hybridisation assays
- C12Q1/6816—Hybridisation assays characterised by the detection means
- C12Q1/6818—Hybridisation assays characterised by the detection means involving interaction of two or more labels, e.g. resonant energy transfer
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- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
- C12Q1/6804—Nucleic acid analysis using immunogens
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- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
- C12Q1/6844—Nucleic acid amplification reactions
- C12Q1/6858—Allele-specific amplification
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- G—PHYSICS
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- G01N—INVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
- G01N21/00—Investigating or analysing materials by the use of optical means, i.e. using sub-millimetre waves, infrared, visible or ultraviolet light
- G01N21/62—Systems in which the material investigated is excited whereby it emits light or causes a change in wavelength of the incident light
- G01N21/63—Systems in which the material investigated is excited whereby it emits light or causes a change in wavelength of the incident light optically excited
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- G01N21/00—Investigating or analysing materials by the use of optical means, i.e. using sub-millimetre waves, infrared, visible or ultraviolet light
- G01N21/62—Systems in which the material investigated is excited whereby it emits light or causes a change in wavelength of the incident light
- G01N21/63—Systems in which the material investigated is excited whereby it emits light or causes a change in wavelength of the incident light optically excited
- G01N21/64—Fluorescence; Phosphorescence
- G01N21/6486—Measuring fluorescence of biological material, e.g. DNA, RNA, cells
-
- G—PHYSICS
- G01—MEASURING; TESTING
- G01N—INVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
- G01N21/00—Investigating or analysing materials by the use of optical means, i.e. using sub-millimetre waves, infrared, visible or ultraviolet light
- G01N21/62—Systems in which the material investigated is excited whereby it emits light or causes a change in wavelength of the incident light
- G01N21/63—Systems in which the material investigated is excited whereby it emits light or causes a change in wavelength of the incident light optically excited
- G01N21/64—Fluorescence; Phosphorescence
- G01N21/6428—Measuring fluorescence of fluorescent products of reactions or of fluorochrome labelled reactive substances, e.g. measuring quenching effects, using measuring "optrodes"
- G01N2021/6439—Measuring fluorescence of fluorescent products of reactions or of fluorochrome labelled reactive substances, e.g. measuring quenching effects, using measuring "optrodes" with indicators, stains, dyes, tags, labels, marks
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- Chemical & Material Sciences (AREA)
- Life Sciences & Earth Sciences (AREA)
- Health & Medical Sciences (AREA)
- Organic Chemistry (AREA)
- Engineering & Computer Science (AREA)
- Zoology (AREA)
- Wood Science & Technology (AREA)
- Proteomics, Peptides & Aminoacids (AREA)
- Immunology (AREA)
- Analytical Chemistry (AREA)
- Physics & Mathematics (AREA)
- Biochemistry (AREA)
- General Health & Medical Sciences (AREA)
- Molecular Biology (AREA)
- Microbiology (AREA)
- Biotechnology (AREA)
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- General Engineering & Computer Science (AREA)
- Biophysics (AREA)
- Chemical Kinetics & Catalysis (AREA)
- Pathology (AREA)
- Nuclear Medicine, Radiotherapy & Molecular Imaging (AREA)
- General Physics & Mathematics (AREA)
- Biomedical Technology (AREA)
- Optics & Photonics (AREA)
- Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
- Apparatus Associated With Microorganisms And Enzymes (AREA)
- Dispersion Chemistry (AREA)
Applications Claiming Priority (2)
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| US42074710P | 2010-12-07 | 2010-12-07 | |
| PCT/US2011/063654 WO2012078710A1 (en) | 2010-12-07 | 2011-12-07 | Nucleic acid target detection using a detector, a probe and an inhibitor |
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| SG191725A1 true SG191725A1 (en) | 2013-08-30 |
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| SG2013043880A SG191725A1 (en) | 2010-12-07 | 2011-12-07 | Nucleic acid target detection using a detector, a probe and an inhibitor |
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| SG (1) | SG191725A1 (enExample) |
| WO (1) | WO2012078710A1 (enExample) |
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| WO2012078710A1 (en) | 2010-12-07 | 2012-06-14 | Gnubio, Inc. | Nucleic acid target detection using a detector, a probe and an inhibitor |
| JP6472998B2 (ja) | 2011-03-30 | 2019-02-20 | バイオ−ラッド ラボラトリーズ インコーポレイテッド | 液滴内への、または液滴からの複数の容量の注入 |
| WO2012135327A1 (en) | 2011-03-31 | 2012-10-04 | Gnubio Inc. | Managing variation in spectroscopic intensity measurements through the use of a reference component |
| US9228898B2 (en) | 2011-03-31 | 2016-01-05 | Gnubio, Inc. | Scalable spectroscopic detection and measurement |
| CN108479872B (zh) | 2012-09-12 | 2021-02-12 | 基纽拜奥股份有限公司 | 用于进行试验的集成微流体系统、方法和试剂盒 |
| EP3473905B1 (en) | 2013-01-25 | 2020-07-29 | Bio-rad Laboratories, Inc. | System and method for performing droplet inflation |
| WO2014176599A1 (en) | 2013-04-26 | 2014-10-30 | Gnubio, Inc. | A method for blocking polymerase extension of 3 prime dna ends by stem-loop structure |
| WO2014194131A2 (en) | 2013-05-29 | 2014-12-04 | Gnubio, Inc. | Systems and methods for sequencing in emulsion based microfluidics |
| CN105393094B (zh) | 2013-05-29 | 2019-07-23 | 生物辐射实验室股份有限公司 | 低成本光学高速离散测量系统 |
| EP3039119A4 (en) | 2013-08-27 | 2017-04-05 | GnuBIO, Inc. | Microfluidic devices and methods of their use |
| EP3052236B1 (en) | 2013-09-30 | 2021-07-14 | Bio-Rad Laboratories, Inc. | Microfluidic cartridge device and methods of use and assembly |
| CN106061598B (zh) | 2013-11-27 | 2020-08-28 | 生物辐射实验室股份有限公司 | 微流体液滴包裹 |
| US9683792B2 (en) | 2014-06-30 | 2017-06-20 | Bio-Rad Laboratories, Inc. | Floating thermal contact enabled PCR |
| EP3574047B1 (en) | 2017-01-30 | 2024-03-06 | Bio-Rad Laboratories, Inc. | Emulsion compositions and methods of their use |
| WO2018175399A1 (en) | 2017-03-24 | 2018-09-27 | Bio-Rad Laboratories, Inc. | Universal hairpin primers |
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| US5538848A (en) * | 1994-11-16 | 1996-07-23 | Applied Biosystems Division, Perkin-Elmer Corp. | Method for detecting nucleic acid amplification using self-quenching fluorescence probe |
| US6007994A (en) * | 1995-12-22 | 1999-12-28 | Yale University | Multiparametric fluorescence in situ hybridization |
| US6235502B1 (en) * | 1998-09-18 | 2001-05-22 | Molecular Staging Inc. | Methods for selectively isolating DNA using rolling circle amplification |
| US20030148303A1 (en) * | 2000-09-19 | 2003-08-07 | Nadeau James G. | Universal probes and methods for detection of nucleic acids |
| EP1409735A4 (en) * | 2001-06-25 | 2005-10-05 | Georgia Tech Res Inst | DOUBLE-RESONANCE ENERGY TRANSFER NUCLEIC PROBES |
| EP2662135A3 (en) | 2003-08-27 | 2013-12-25 | President and Fellows of Harvard College | Method for mixing droplets in a microchannel |
| JP2009536313A (ja) | 2006-01-11 | 2009-10-08 | レインダンス テクノロジーズ， インコーポレイテッド | ナノリアクターの形成および制御において使用するマイクロ流体デバイスおよび方法 |
| ATE540750T1 (de) * | 2006-05-11 | 2012-01-15 | Raindance Technologies Inc | Mikrofluidische vorrichtung und verfahren |
| WO2008021446A2 (en) * | 2006-08-15 | 2008-02-21 | Genetag Technology, Inc. | Probe-antiprobe compositions and methods for dna or rna detection |
| WO2008045158A1 (en) * | 2006-10-10 | 2008-04-17 | Illumina, Inc. | Compositions and methods for representational selection of nucleic acids fro complex mixtures using hybridization |
| US20100129792A1 (en) * | 2007-02-06 | 2010-05-27 | Gerassimos Makrigiorgos | Direct monitoring and pcr amplification of the dosage and dosage difference between target genetic regions |
| US20100273156A1 (en) * | 2007-05-31 | 2010-10-28 | Becton, Dickinson And Company | Sequences and methods for detecting influenza a and influenza b virus |
| CN101946010B (zh) | 2007-12-21 | 2014-08-20 | 哈佛大学 | 用于核酸测序的系统和方法 |
| EP2286125B1 (en) | 2008-05-16 | 2015-07-08 | President and Fellows of Harvard College | Valves and other flow control in fluidic systems including microfluidic systems |
| WO2010033200A2 (en) | 2008-09-19 | 2010-03-25 | President And Fellows Of Harvard College | Creation of libraries of droplets and related species |
| EP3150724A1 (en) | 2008-12-19 | 2017-04-05 | President and Fellows of Harvard College | Particle-assisted nucleic acid sequencing |
| US8528589B2 (en) | 2009-03-23 | 2013-09-10 | Raindance Technologies, Inc. | Manipulation of microfluidic droplets |
| JP5687414B2 (ja) * | 2009-04-20 | 2015-03-18 | オリンパス株式会社 | 多型の識別方法 |
| SG177369A1 (en) | 2009-06-26 | 2012-02-28 | Harvard College | Fluid injection |
| AU2010315580B2 (en) | 2009-10-27 | 2014-11-06 | President And Fellows Of Harvard College | Droplet creation techniques |
| JP5934657B2 (ja) | 2010-02-12 | 2016-06-15 | レインダンス テクノロジーズ， インコーポレイテッド | デジタル検体分析 |
| WO2012078710A1 (en) | 2010-12-07 | 2012-06-14 | Gnubio, Inc. | Nucleic acid target detection using a detector, a probe and an inhibitor |
| US9364803B2 (en) | 2011-02-11 | 2016-06-14 | Raindance Technologies, Inc. | Methods for forming mixed droplets |
| US9150852B2 (en) | 2011-02-18 | 2015-10-06 | Raindance Technologies, Inc. | Compositions and methods for molecular labeling |
| JP6472998B2 (ja) | 2011-03-30 | 2019-02-20 | バイオ−ラッド ラボラトリーズ インコーポレイテッド | 液滴内への、または液滴からの複数の容量の注入 |
| WO2012135327A1 (en) | 2011-03-31 | 2012-10-04 | Gnubio Inc. | Managing variation in spectroscopic intensity measurements through the use of a reference component |
| US9228898B2 (en) | 2011-03-31 | 2016-01-05 | Gnubio, Inc. | Scalable spectroscopic detection and measurement |
| US8841071B2 (en) | 2011-06-02 | 2014-09-23 | Raindance Technologies, Inc. | Sample multiplexing |
| CN103958050B (zh) | 2011-09-28 | 2016-09-14 | 哈佛学院院长等 | 用于液滴产生和/或流体操纵的系统和方法 |
| WO2013122826A1 (en) | 2012-02-14 | 2013-08-22 | Gnubio, Inc. | Cascaded addition of target specific universal adapters to nucleic acids |
| EP3524693A1 (en) | 2012-04-30 | 2019-08-14 | Raindance Technologies, Inc. | Digital analyte analysis |
| CN108479872B (zh) | 2012-09-12 | 2021-02-12 | 基纽拜奥股份有限公司 | 用于进行试验的集成微流体系统、方法和试剂盒 |
| WO2014093976A1 (en) | 2012-12-14 | 2014-06-19 | Gnubio, Inc. | Method for maintaining heterogeneous concentrations of molecules in emulsion droplets |
| EP3473905B1 (en) | 2013-01-25 | 2020-07-29 | Bio-rad Laboratories, Inc. | System and method for performing droplet inflation |
| WO2014176599A1 (en) | 2013-04-26 | 2014-10-30 | Gnubio, Inc. | A method for blocking polymerase extension of 3 prime dna ends by stem-loop structure |
| CN105393094B (zh) | 2013-05-29 | 2019-07-23 | 生物辐射实验室股份有限公司 | 低成本光学高速离散测量系统 |
| WO2014194131A2 (en) | 2013-05-29 | 2014-12-04 | Gnubio, Inc. | Systems and methods for sequencing in emulsion based microfluidics |
| EP3039119A4 (en) | 2013-08-27 | 2017-04-05 | GnuBIO, Inc. | Microfluidic devices and methods of their use |
| EP3052236B1 (en) | 2013-09-30 | 2021-07-14 | Bio-Rad Laboratories, Inc. | Microfluidic cartridge device and methods of use and assembly |
| US9683792B2 (en) | 2014-06-30 | 2017-06-20 | Bio-Rad Laboratories, Inc. | Floating thermal contact enabled PCR |
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| CN103348017A (zh) | 2013-10-09 |
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| US10533212B2 (en) | 2020-01-14 |
| US9581549B2 (en) | 2017-02-28 |
| CN105603071B (zh) | 2019-06-21 |
| JP2014500729A (ja) | 2014-01-16 |
| EP2649202A1 (en) | 2013-10-16 |
| CN105603071A (zh) | 2016-05-25 |
| CN103348017B (zh) | 2016-01-20 |
| AU2011338502B2 (en) | 2016-08-11 |
| CA2820094A1 (en) | 2012-06-14 |
| JP6096672B2 (ja) | 2017-03-15 |
| CA2820094C (en) | 2019-02-26 |
| AU2011338502A1 (en) | 2013-06-13 |
| EP2649202A4 (en) | 2015-05-27 |
| WO2012078710A1 (en) | 2012-06-14 |
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