RU2005103822A - Олигонуклеиды для выявления микроорганизмов - Google Patents
Олигонуклеиды для выявления микроорганизмов Download PDFInfo
- Publication number
- RU2005103822A RU2005103822A RU2005103822/13A RU2005103822A RU2005103822A RU 2005103822 A RU2005103822 A RU 2005103822A RU 2005103822/13 A RU2005103822/13 A RU 2005103822/13A RU 2005103822 A RU2005103822 A RU 2005103822A RU 2005103822 A RU2005103822 A RU 2005103822A
- Authority
- RU
- Russia
- Prior art keywords
- oligonucleotides
- oligonucleotide
- iii
- sequence
- group including
- Prior art date
Links
- 244000005700 microbiome Species 0.000 title claims 13
- 108091034117 Oligonucleotide Proteins 0.000 claims 143
- JLCPHMBAVCMARE-UHFFFAOYSA-N [3-[[3-[[3-[[3-[[3-[[3-[[3-[[3-[[3-[[3-[[3-[[5-(2-amino-6-oxo-1H-purin-9-yl)-3-[[3-[[3-[[3-[[3-[[3-[[5-(2-amino-6-oxo-1H-purin-9-yl)-3-[[5-(2-amino-6-oxo-1H-purin-9-yl)-3-hydroxyoxolan-2-yl]methoxy-hydroxyphosphoryl]oxyoxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(5-methyl-2,4-dioxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxyoxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(5-methyl-2,4-dioxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(4-amino-2-oxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(5-methyl-2,4-dioxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(5-methyl-2,4-dioxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(4-amino-2-oxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(4-amino-2-oxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(4-amino-2-oxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(4-amino-2-oxopyrimidin-1-yl)oxolan-2-yl]methyl [5-(6-aminopurin-9-yl)-2-(hydroxymethyl)oxolan-3-yl] hydrogen phosphate Polymers Cc1cn(C2CC(OP(O)(=O)OCC3OC(CC3OP(O)(=O)OCC3OC(CC3O)n3cnc4c3nc(N)[nH]c4=O)n3cnc4c3nc(N)[nH]c4=O)C(COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3CO)n3cnc4c(N)ncnc34)n3ccc(N)nc3=O)n3cnc4c(N)ncnc34)n3ccc(N)nc3=O)n3ccc(N)nc3=O)n3ccc(N)nc3=O)n3cnc4c(N)ncnc34)n3cnc4c(N)ncnc34)n3cc(C)c(=O)[nH]c3=O)n3cc(C)c(=O)[nH]c3=O)n3ccc(N)nc3=O)n3cc(C)c(=O)[nH]c3=O)n3cnc4c3nc(N)[nH]c4=O)n3cnc4c(N)ncnc34)n3cnc4c(N)ncnc34)n3cnc4c(N)ncnc34)n3cnc4c(N)ncnc34)O2)c(=O)[nH]c1=O JLCPHMBAVCMARE-UHFFFAOYSA-N 0.000 claims 108
- 230000000295 complement effect Effects 0.000 claims 15
- 238000011895 specific detection Methods 0.000 claims 15
- 230000014670 detection of bacterium Effects 0.000 claims 10
- 238000000034 method Methods 0.000 claims 9
- 239000003550 marker Substances 0.000 claims 6
- 238000009396 hybridization Methods 0.000 claims 5
- 241000186216 Corynebacterium Species 0.000 claims 4
- LFQSCWFLJHTTHZ-UHFFFAOYSA-N Ethanol Chemical compound CCO LFQSCWFLJHTTHZ-UHFFFAOYSA-N 0.000 claims 4
- 241000555676 Malassezia Species 0.000 claims 4
- 241000191992 Peptostreptococcus Species 0.000 claims 4
- 241000204388 Sporomusa Species 0.000 claims 4
- 241000191940 Staphylococcus Species 0.000 claims 4
- 241001148134 Veillonella Species 0.000 claims 4
- QTBSBXVTEAMEQO-UHFFFAOYSA-N Acetic acid Chemical compound CC(O)=O QTBSBXVTEAMEQO-UHFFFAOYSA-N 0.000 claims 3
- 239000002773 nucleotide Substances 0.000 claims 3
- 125000003729 nucleotide group Chemical group 0.000 claims 3
- 230000035699 permeability Effects 0.000 claims 3
- CSCPPACGZOOCGX-UHFFFAOYSA-N Acetone Chemical compound CC(C)=O CSCPPACGZOOCGX-UHFFFAOYSA-N 0.000 claims 2
- 241000186427 Cutibacterium acnes Species 0.000 claims 2
- 241000186429 Propionibacterium Species 0.000 claims 2
- 230000010244 detection of fungus Effects 0.000 claims 2
- 239000000126 substance Substances 0.000 claims 2
- 102000002260 Alkaline Phosphatase Human genes 0.000 claims 1
- 108020004774 Alkaline Phosphatase Proteins 0.000 claims 1
- 108010067770 Endopeptidase K Proteins 0.000 claims 1
- 108090000790 Enzymes Proteins 0.000 claims 1
- 102000004190 Enzymes Human genes 0.000 claims 1
- SXRSQZLOMIGNAQ-UHFFFAOYSA-N Glutaraldehyde Chemical compound O=CCCCC=O SXRSQZLOMIGNAQ-UHFFFAOYSA-N 0.000 claims 1
- 108010001336 Horseradish Peroxidase Proteins 0.000 claims 1
- 108090000988 Lysostaphin Proteins 0.000 claims 1
- 102000016943 Muramidase Human genes 0.000 claims 1
- 108010014251 Muramidase Proteins 0.000 claims 1
- 108010062010 N-Acetylmuramoyl-L-alanine Amidase Proteins 0.000 claims 1
- 229930040373 Paraformaldehyde Natural products 0.000 claims 1
- 102000003992 Peroxidases Human genes 0.000 claims 1
- 102000045595 Phosphoprotein Phosphatases Human genes 0.000 claims 1
- 108700019535 Phosphoprotein Phosphatases Proteins 0.000 claims 1
- 108010059712 Pronase Proteins 0.000 claims 1
- 239000003570 air Substances 0.000 claims 1
- 210000004027 cell Anatomy 0.000 claims 1
- 210000002421 cell wall Anatomy 0.000 claims 1
- 239000003153 chemical reaction reagent Substances 0.000 claims 1
- 239000012141 concentrate Substances 0.000 claims 1
- 239000002537 cosmetic Substances 0.000 claims 1
- 239000003431 cross linking reagent Substances 0.000 claims 1
- 230000006378 damage Effects 0.000 claims 1
- 238000001514 detection method Methods 0.000 claims 1
- 230000002255 enzymatic effect Effects 0.000 claims 1
- 229940088598 enzyme Drugs 0.000 claims 1
- 238000010438 heat treatment Methods 0.000 claims 1
- 238000007901 in situ hybridization Methods 0.000 claims 1
- 238000011534 incubation Methods 0.000 claims 1
- 229960000274 lysozyme Drugs 0.000 claims 1
- 239000004325 lysozyme Substances 0.000 claims 1
- 235000010335 lysozyme Nutrition 0.000 claims 1
- 239000000463 material Substances 0.000 claims 1
- WSFSSNUMVMOOMR-NJFSPNSNSA-N methanone Chemical compound O=[14CH2] WSFSSNUMVMOOMR-NJFSPNSNSA-N 0.000 claims 1
- 239000000203 mixture Substances 0.000 claims 1
- 108010009719 mutanolysin Proteins 0.000 claims 1
- 239000013642 negative control Substances 0.000 claims 1
- 108020004707 nucleic acids Proteins 0.000 claims 1
- 150000007523 nucleic acids Chemical class 0.000 claims 1
- 102000039446 nucleic acids Human genes 0.000 claims 1
- 229920002866 paraformaldehyde Polymers 0.000 claims 1
- 108040007629 peroxidase activity proteins Proteins 0.000 claims 1
- 239000013641 positive control Substances 0.000 claims 1
- 238000011002 quantification Methods 0.000 claims 1
- 230000002285 radioactive effect Effects 0.000 claims 1
- 238000005070 sampling Methods 0.000 claims 1
- 239000002689 soil Substances 0.000 claims 1
- 239000002351 wastewater Substances 0.000 claims 1
- XLYOFNOQVPJJNP-UHFFFAOYSA-N water Substances O XLYOFNOQVPJJNP-UHFFFAOYSA-N 0.000 claims 1
Classifications
-
- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07H—SUGARS; DERIVATIVES THEREOF; NUCLEOSIDES; NUCLEOTIDES; NUCLEIC ACIDS
- C07H21/00—Compounds containing two or more mononucleotide units having separate phosphate or polyphosphate groups linked by saccharide radicals of nucleoside groups, e.g. nucleic acids
- C07H21/04—Compounds containing two or more mononucleotide units having separate phosphate or polyphosphate groups linked by saccharide radicals of nucleoside groups, e.g. nucleic acids with deoxyribosyl as saccharide radical
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
- C12Q1/6876—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes
- C12Q1/6888—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for detection or identification of organisms
- C12Q1/689—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for detection or identification of organisms for bacteria
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
Landscapes
- Chemical & Material Sciences (AREA)
- Life Sciences & Earth Sciences (AREA)
- Organic Chemistry (AREA)
- Health & Medical Sciences (AREA)
- Proteomics, Peptides & Aminoacids (AREA)
- Engineering & Computer Science (AREA)
- Zoology (AREA)
- Biochemistry (AREA)
- Molecular Biology (AREA)
- Analytical Chemistry (AREA)
- Wood Science & Technology (AREA)
- Genetics & Genomics (AREA)
- Biotechnology (AREA)
- General Health & Medical Sciences (AREA)
- Biophysics (AREA)
- Microbiology (AREA)
- Bioinformatics & Cheminformatics (AREA)
- General Engineering & Computer Science (AREA)
- Immunology (AREA)
- Physics & Mathematics (AREA)
- Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
Applications Claiming Priority (4)
| Application Number | Priority Date | Filing Date | Title |
|---|---|---|---|
| DE2002132776 DE10232776A1 (de) | 2002-07-18 | 2002-07-18 | Oligonukleotide zum Nachweis von Mikroorganismen |
| DE10232776.9 | 2002-07-18 | ||
| DE10307732.4 | 2003-02-14 | ||
| DE2003107732 DE10307732A1 (de) | 2003-02-14 | 2003-02-14 | Oligonukleotide zum Nachweis von Mikroorganismen |
Publications (1)
| Publication Number | Publication Date |
|---|---|
| RU2005103822A true RU2005103822A (ru) | 2005-11-10 |
Family
ID=30771717
Family Applications (1)
| Application Number | Title | Priority Date | Filing Date |
|---|---|---|---|
| RU2005103822/13A RU2005103822A (ru) | 2002-07-18 | 2003-07-16 | Олигонуклеиды для выявления микроорганизмов |
Country Status (8)
| Country | Link |
|---|---|
| US (1) | US20050202477A1 (https=) |
| EP (1) | EP1523579A2 (https=) |
| JP (1) | JP2006500010A (https=) |
| CN (1) | CN1668765A (https=) |
| AU (1) | AU2003250080A1 (https=) |
| BR (1) | BR0312944A (https=) |
| RU (1) | RU2005103822A (https=) |
| WO (1) | WO2004009839A2 (https=) |
Families Citing this family (11)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| AU2003257470A1 (en) * | 2002-07-18 | 2004-02-09 | Henkel Kommanditgesellschaft Auf Aktien | Detection of microorganisms |
| DE102004025710A1 (de) * | 2004-05-26 | 2005-12-22 | Eppendorf Ag | Verfahren zur taxonspezifischen Zellidentifizierung und Zellsortierung auf grampositive Bakterien und Vorrichtungen hierfür |
| JP5201818B2 (ja) * | 2006-11-10 | 2013-06-05 | キヤノン株式会社 | プローブセット、プローブ固定担体及び遺伝子検査方法 |
| DE102007021387A1 (de) | 2007-05-04 | 2008-11-06 | Eads Deutschland Gmbh | Detektionsvorrichtung zur Detektion von biologischen Mikropartikeln wie Bakterien, Viren, Sporen, Pollen oder biologische Toxine, sowie Detektionsverfahren |
| WO2009105592A2 (en) * | 2008-02-19 | 2009-08-27 | Hogan James J | Compositions and methods for detection of propionibacterium acnes nucleic acid |
| CN102016047B (zh) * | 2008-03-26 | 2014-05-28 | 丹尼斯科美国公司 | 生产含二硫键的蛋白质的宿主细胞和方法 |
| US8481302B2 (en) * | 2008-11-03 | 2013-07-09 | General Electric Company | Total bacteria monitoring system |
| JP7081802B2 (ja) * | 2018-06-04 | 2022-06-07 | 日本メナード化粧品株式会社 | 赤ニキビを予測する方法 |
| CN109554490B (zh) * | 2018-12-18 | 2020-09-22 | 蚌埠医学院第一附属医院 | 一种与复发性流产相关的微生物及其应用 |
| USD982375S1 (en) | 2019-06-06 | 2023-04-04 | Sharkninja Operating Llc | Food preparation device |
| KR102855638B1 (ko) * | 2020-01-30 | 2025-09-05 | (주)아모레퍼시픽 | 민감성 피부 및 비민감성 피부의 판별방법 |
Family Cites Families (7)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| US5541308A (en) * | 1986-11-24 | 1996-07-30 | Gen-Probe Incorporated | Nucleic acid probes for detection and/or quantitation of non-viral organisms |
| US5474796A (en) * | 1991-09-04 | 1995-12-12 | Protogene Laboratories, Inc. | Method and apparatus for conducting an array of chemical reactions on a support surface |
| US5426025A (en) * | 1992-05-28 | 1995-06-20 | Florida State University | Species-specific DNA probes for vibrio vulnificus methods and kits |
| FR2733755B1 (fr) * | 1995-05-03 | 1997-07-11 | Bio Merieux | Fragment nucleotidique de l'arn ribosomique 16s de corynebacteries, sondes et amorces derivees, reactif et procede de detection |
| US6737248B2 (en) * | 1996-01-05 | 2004-05-18 | Human Genome Sciences, Inc. | Staphylococcus aureus polynucleotides and sequences |
| AU5595200A (en) * | 1999-06-04 | 2000-12-28 | Kairos Scientific Inc. | Multispectral taxonomic identification |
| AU2003257470A1 (en) * | 2002-07-18 | 2004-02-09 | Henkel Kommanditgesellschaft Auf Aktien | Detection of microorganisms |
-
2003
- 2003-07-16 AU AU2003250080A patent/AU2003250080A1/en not_active Abandoned
- 2003-07-16 WO PCT/EP2003/007717 patent/WO2004009839A2/de not_active Ceased
- 2003-07-16 CN CNA038170558A patent/CN1668765A/zh active Pending
- 2003-07-16 EP EP03765004A patent/EP1523579A2/de not_active Withdrawn
- 2003-07-16 RU RU2005103822/13A patent/RU2005103822A/ru not_active Application Discontinuation
- 2003-07-16 JP JP2004522470A patent/JP2006500010A/ja not_active Withdrawn
- 2003-07-16 BR BR0312944-6A patent/BR0312944A/pt not_active IP Right Cessation
-
2005
- 2005-01-18 US US11/039,026 patent/US20050202477A1/en not_active Abandoned
Also Published As
| Publication number | Publication date |
|---|---|
| BR0312944A (pt) | 2005-07-12 |
| AU2003250080A8 (en) | 2004-02-09 |
| JP2006500010A (ja) | 2006-01-05 |
| WO2004009839A2 (de) | 2004-01-29 |
| AU2003250080A1 (en) | 2004-02-09 |
| WO2004009839A3 (de) | 2004-04-08 |
| EP1523579A2 (de) | 2005-04-20 |
| US20050202477A1 (en) | 2005-09-15 |
| CN1668765A (zh) | 2005-09-14 |
Similar Documents
| Publication | Publication Date | Title |
|---|---|---|
| US20240344097A1 (en) | Amplicon rescue multiplex polymerase chain reaction for amplification of multiple targets | |
| Kreader | Design and evaluation of Bacteroides DNA probes for the specific detection of human fecal pollution | |
| US6627226B2 (en) | Dry solid medium for storage and analysis of genetic material | |
| DK0657530T3 (da) | Fremgangsmåde til bestemmelse af tilstedeværelsen af en organisme i en fysiologisk prøve | |
| DE60038015D1 (de) | Verfahren, basierend auf einer polynukleotidmatrix, zur identifizierung von mikroorganismen | |
| RU2005103822A (ru) | Олигонуклеиды для выявления микроорганизмов | |
| Donde et al. | Understanding wastewater treatment mechanisms: a review on detection, removal, and purification efficiencies of faecal bacteria indicators across constructed wetlands | |
| RU2009120527A (ru) | Способ и набор для детектирования микроорганизма | |
| Lebuhn et al. | Using quantitative real-time PCR to determine the hygienic status of cattle manure | |
| RU2005103818A (ru) | Выявление микроорганизмов | |
| KR101040518B1 (ko) | 미생물 자원 내 혐기성 암모늄 산화균의 탐색 및 배양 방법 | |
| AU681081B2 (en) | Procedure for the detection and identification of viral and subviral pathogens | |
| WO1999018234A2 (en) | Means for qualitative and quantitative analysis of microbial populations potentially present in a sample | |
| CA2555346C (en) | Method of detecting nucleic acid and utilization thereof | |
| JP2006500010A5 (https=) | ||
| JP2005532818A5 (https=) | ||
| CN101233244A (zh) | 检测生存力相关分子的改进方法 | |
| Sołtysik et al. | RETRACTED ARTICLE: Repetitive extragenic palindromic PCR (REP-PCR) as a method used for bulking process detection in activated sludge | |
| JPH04267898A (ja) | ｍＲＮＡの検出方法及びｍＲＮＡの取得方法 | |
| KR101694232B1 (ko) | 뉴클레아제 보호 분석 통합 샌드위치 혼성을 사용하는 차토넬라 마리나 검출방법 및 검출용 키트 | |
| WO2007099328A1 (en) | Methods and means for immobilizing nucleic acids on solid supports and their uses | |
| Sanchez | TECHNISCHE UNIVERSITÄT MUNCHEN | |
| Isola et al. | Development of gene-probe-based biosensors for environmental analysis | |
| Peters | Advances in Water and Wastewater Treatment Technology: Molecular Technology, Nutrient Removal, Sludge Reduction, and Environmental Health | |
| Taşkın | Selective quantification of viable Escherichia coli cells in biosolids upon propidium monoazide treatment by quantitative PCR |
Legal Events
| Date | Code | Title | Description |
|---|---|---|---|
| FA92 | Acknowledgement of application withdrawn (lack of supplementary materials submitted) |
Effective date: 20080918 |