JP6804462B2 - 指数関数の底が2より大きい核酸増幅 - Google Patents

指数関数の底が2より大きい核酸増幅 Download PDF

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JP6804462B2
JP6804462B2 JP2017550468A JP2017550468A JP6804462B2 JP 6804462 B2 JP6804462 B2 JP 6804462B2 JP 2017550468 A JP2017550468 A JP 2017550468A JP 2017550468 A JP2017550468 A JP 2017550468A JP 6804462 B2 JP6804462 B2 JP 6804462B2
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primer
sequence
strand
template
stranded
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ラッセル・ヒグチ
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セファイド
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    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6844—Nucleic acid amplification reactions
    • C12Q1/686—Polymerase chain reaction [PCR]
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2525/00—Reactions involving modified oligonucleotides, nucleic acids, or nucleotides
    • C12Q2525/10—Modifications characterised by
    • C12Q2525/155—Modifications characterised by incorporating/generating a new priming site
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2525/00—Reactions involving modified oligonucleotides, nucleic acids, or nucleotides
    • C12Q2525/10—Modifications characterised by
    • C12Q2525/161—Modifications characterised by incorporating target specific and non-target specific sites
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2525/00—Reactions involving modified oligonucleotides, nucleic acids, or nucleotides
    • C12Q2525/10—Modifications characterised by
    • C12Q2525/191—Modifications characterised by incorporating an adaptor
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2531/00—Reactions of nucleic acids characterised by
    • C12Q2531/10—Reactions of nucleic acids characterised by the purpose being amplify/increase the copy number of target nucleic acid
    • C12Q2531/119—Strand displacement amplification [SDA]

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  • Chemical & Material Sciences (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Organic Chemistry (AREA)
  • Health & Medical Sciences (AREA)
  • Zoology (AREA)
  • Wood Science & Technology (AREA)
  • Engineering & Computer Science (AREA)
  • Chemical Kinetics & Catalysis (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Molecular Biology (AREA)
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  • Microbiology (AREA)
  • Biotechnology (AREA)
  • Biochemistry (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • General Engineering & Computer Science (AREA)
  • General Health & Medical Sciences (AREA)
  • Genetics & Genomics (AREA)
  • Biophysics (AREA)
  • Analytical Chemistry (AREA)
  • Physics & Mathematics (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
  • Preparation Of Compounds By Using Micro-Organisms (AREA)
JP2017550468A 2014-12-15 2015-12-15 指数関数の底が2より大きい核酸増幅 Expired - Fee Related JP6804462B2 (ja)

Applications Claiming Priority (3)

Application Number Priority Date Filing Date Title
US201462092102P 2014-12-15 2014-12-15
US62/092,102 2014-12-15
PCT/US2015/065890 WO2016100388A1 (en) 2014-12-15 2015-12-15 Exponential base-greater-than-2 nucleic acid amplification

Publications (3)

Publication Number Publication Date
JP2017537658A JP2017537658A (ja) 2017-12-21
JP2017537658A5 JP2017537658A5 (enExample) 2019-02-07
JP6804462B2 true JP6804462B2 (ja) 2020-12-23

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JP2017550468A Expired - Fee Related JP6804462B2 (ja) 2014-12-15 2015-12-15 指数関数の底が2より大きい核酸増幅

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Country Link
US (3) US10273534B2 (enExample)
EP (1) EP3234188B1 (enExample)
JP (1) JP6804462B2 (enExample)
CN (2) CN114369596B (enExample)
AU (2) AU2015362617B2 (enExample)
CA (1) CA2971006C (enExample)
DK (1) DK3234188T3 (enExample)
ES (1) ES2764975T3 (enExample)
HK (1) HK1247255A1 (enExample)
PT (1) PT3234188T (enExample)
WO (1) WO2016100388A1 (enExample)

Families Citing this family (13)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
HK1247255A1 (zh) 2014-12-15 2018-09-21 Cepheid 底数大於2的指数核酸扩增
EP3287528A1 (de) * 2016-08-25 2018-02-28 AGCT GmbH Verfahren zur amplifikation von nukleinsäuren und kit zu dessen durchführung
EP3759247A1 (de) * 2018-02-26 2021-01-06 AGCT GmbH Verfahren zur primer-verlängerungsreaktion mit verbesserter spezifität
EP3759248A1 (de) * 2018-02-26 2021-01-06 AGCT GmbH Agverfahren zur amplifikation einer nukleinsäure mit verbesserter spezifität
EP3759246A1 (de) * 2018-02-28 2021-01-06 AGCT GmbH Verfahren zur amplifikation einer nukleinsäure mit verbesserter spezifität
EP3874064A1 (en) * 2018-10-29 2021-09-08 Cepheid Exponential base-3 nucleic acid amplification with reduced amplification time using nested overlapping primers
US20210403981A1 (en) * 2020-04-27 2021-12-30 Cepheid Exponential base-3 and greater nucleic acid amplification with cycling probe
EP4170046A4 (en) * 2020-06-23 2024-07-24 Heimbiotek Inc. COMPOSITION FOR SEQUENTIAL POLYMERASE CHAIN REACTION AND GENE AMPLIFICATION METHODS THEREOF
JP7900392B2 (ja) 2020-12-24 2026-08-04 インテグレイテツド・デイー・エヌ・エイ・テクノロジーズ・インコーポレイテツド 高忠実度DNAポリメラーゼによるrhPCRベース増幅産物シーケンシングにおいて、プライマー二量体及びオフターゲット増幅を低減するRNアーゼH2突然変異体
EP4479559A4 (en) * 2022-02-15 2026-02-18 Cepheid NUCLEIC ACID AMPLIFICATION WITH AN EXPONENTIAL BASIS ABOVE BASE 2 USING HIGH AND LOW PRIMERS TM
KR20250155028A (ko) * 2023-02-23 2025-10-29 세페이드 앰플리콘 폴딩 및 Tm을 감소시키기 위한 불안정화 뉴클레오타이드 삼인산의 용도
WO2026019604A1 (en) * 2024-07-19 2026-01-22 Cepheid Exponential base-x amplification with hairpin nested primers and universal flanking primers
WO2026106907A1 (en) 2024-11-18 2026-05-21 Cepheid Fast pcr by tandem primer embedded with ribonucleotide

Family Cites Families (39)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US4458066A (en) 1980-02-29 1984-07-03 University Patents, Inc. Process for preparing polynucleotides
US4683195A (en) 1986-01-30 1987-07-28 Cetus Corporation Process for amplifying, detecting, and/or-cloning nucleic acid sequences
US5449602A (en) 1988-01-13 1995-09-12 Amoco Corporation Template-directed photoligation
US5494810A (en) 1990-05-03 1996-02-27 Cornell Research Foundation, Inc. Thermostable ligase-mediated DNA amplifications system for the detection of genetic disease
AU8132994A (en) 1993-11-05 1995-05-23 Board Of Trustees Of The Leland Stanford Junior University Nucleic acids encoding {his5, trp7, tyr8}-gnrh preprohormone and {ser8}-gnrh preprohormone and their uses
AU735440B2 (en) 1996-02-09 2001-07-05 Cornell Research Foundation Inc. Detection of nucleic acid sequence differences using the ligase detection reaction with addressable arrays
AU730633B2 (en) 1996-05-29 2001-03-08 Phillip Belgrader Detection of nucleic acid sequence differences using coupled ligase detection and polymerase chain reactions
US6312892B1 (en) 1996-07-19 2001-11-06 Cornell Research Foundation, Inc. High fidelity detection of nucleic acid differences by ligase detection reaction
US5958349A (en) 1997-02-28 1999-09-28 Cepheid Reaction vessel for heat-exchanging chemical processes
US6770748B2 (en) 1997-03-07 2004-08-03 Takeshi Imanishi Bicyclonucleoside and oligonucleotide analogue
WO1999033559A1 (en) 1997-12-24 1999-07-08 Cepheid Integrated fluid manipulation cartridge
US6794499B2 (en) 1997-09-12 2004-09-21 Exiqon A/S Oligonucleotide analogues
US6027998A (en) 1997-12-17 2000-02-22 Advanced Micro Devices, Inc. Method for fully planarized conductive line for a stack gate
US6506594B1 (en) 1999-03-19 2003-01-14 Cornell Res Foundation Inc Detection of nucleic acid sequence differences using the ligase detection reaction with addressable arrays
US6391541B1 (en) 1999-05-28 2002-05-21 Kurt E. Petersen Apparatus for analyzing a fluid sample
US6818185B1 (en) 1999-05-28 2004-11-16 Cepheid Cartridge for conducting a chemical reaction
US6262490B1 (en) 1999-11-05 2001-07-17 Advanced Semiconductor Engineering, Inc. Substrate strip for use in packaging semiconductor chips
KR100612551B1 (ko) * 1999-11-08 2006-08-11 에이켄 카가꾸 가부시끼가이샤 핵산의 합성방법
US6403037B1 (en) 2000-02-04 2002-06-11 Cepheid Reaction vessel and temperature control system
WO2001092579A2 (en) 2000-05-30 2001-12-06 Pe Corporation (Ny) Methods for detecting target nucleic acids using coupled ligation and amplification
US6605451B1 (en) 2000-06-06 2003-08-12 Xtrana, Inc. Methods and devices for multiplexing amplification reactions
JPWO2002090538A1 (ja) * 2001-05-08 2004-08-26 栄研化学株式会社 核酸を合成する方法
AU2003213652A1 (en) 2002-03-01 2003-09-16 Integrated Dna Technologies, Inc. Polynomial amplification of nucleic acids
DE10253337B4 (de) 2002-11-14 2005-10-20 November Ag Molekulare Medizin Verfahren zum Nachweis einer Nukleinsäure
WO2004068112A2 (en) 2003-01-28 2004-08-12 Gorilla Genomics, Inc. Hairpin primer amplification
US8871469B1 (en) 2004-11-13 2014-10-28 Steven Albert Benner Self-avoiding molecular recognition systems in DNA priming
JP2008029335A (ja) * 2006-07-03 2008-02-14 Fujifilm Corp 新規遺伝子増幅法に用いられるプライマーセットおよびキット
JP2008048648A (ja) * 2006-08-23 2008-03-06 Institute Of Physical & Chemical Research 核酸増幅用プライマーセット及び核酸の増幅方法
US8252558B2 (en) 2006-10-09 2012-08-28 Oxitec Limited Methods for amplifying and detecting nucleic acid sequences
CN101631796B (zh) * 2007-03-09 2013-08-07 独立行政法人理化学研究所 具有由单核苷或单核苷酸衍生的结构的化合物、核酸、标记物以及核酸检测方法和试剂盒
WO2010027870A2 (en) * 2008-08-26 2010-03-11 Fluidigm Corporation Assay methods for increased throughput of samples and/or targets
WO2010133972A1 (en) * 2009-05-22 2010-11-25 Population Genetics Technologies Ltd Sorting asymmetrically tagged nucleic acids by selective primer extension
CN102559928A (zh) * 2011-12-28 2012-07-11 中国海洋大学 特异性引物组、包含其的试剂盒、使用方法及检测方法
KR20130107881A (ko) * 2012-03-23 2013-10-02 삼성테크윈 주식회사 클라미디아 및 임균 유래의 표적 유전자를 동시에 증폭하고 검출하기 위한 멀티 플렉스 키트 및 이를 이용한 진단 방법
US9074249B2 (en) * 2012-06-04 2015-07-07 New England Biolabs, Inc. Detection of amplification products
WO2014164479A1 (en) 2013-03-11 2014-10-09 Elitech Holding B.V. Methods for true isothermal strand displacement amplification
HK1247255A1 (zh) 2014-12-15 2018-09-21 Cepheid 底数大於2的指数核酸扩增
EP3759247A1 (de) 2018-02-26 2021-01-06 AGCT GmbH Verfahren zur primer-verlängerungsreaktion mit verbesserter spezifität
EP3874064A1 (en) 2018-10-29 2021-09-08 Cepheid Exponential base-3 nucleic acid amplification with reduced amplification time using nested overlapping primers

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EP3234188A1 (en) 2017-10-25
ES2764975T3 (es) 2020-06-05
CN107429292B (zh) 2021-12-17
US20180066304A1 (en) 2018-03-08
AU2022203553B2 (en) 2024-08-08
CA2971006C (en) 2024-05-21
CN114369596B (zh) 2025-07-08
JP2017537658A (ja) 2017-12-21
HK1247255A1 (zh) 2018-09-21
US20190203266A1 (en) 2019-07-04
US10273534B2 (en) 2019-04-30
AU2022203553A1 (en) 2022-06-16
CA2971006A1 (en) 2016-06-23
US20210395797A1 (en) 2021-12-23
CN114369596A (zh) 2022-04-19
US11952621B2 (en) 2024-04-09
PT3234188T (pt) 2020-01-16
EP3234188B1 (en) 2019-10-23
WO2016100388A1 (en) 2016-06-23
AU2015362617B2 (en) 2022-03-03
AU2015362617A1 (en) 2017-06-29
CN107429292A (zh) 2017-12-01
US11028434B2 (en) 2021-06-08
DK3234188T3 (da) 2020-01-20

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