DK3418929T3 - Automatiseret screening af enzymvarianter - Google Patents
Automatiseret screening af enzymvarianter Download PDFInfo
- Publication number
- DK3418929T3 DK3418929T3 DK18187438.9T DK18187438T DK3418929T3 DK 3418929 T3 DK3418929 T3 DK 3418929T3 DK 18187438 T DK18187438 T DK 18187438T DK 3418929 T3 DK3418929 T3 DK 3418929T3
- Authority
- DK
- Denmark
- Prior art keywords
- enzyme variants
- automated screening
- screening
- automated
- variants
- Prior art date
Links
Classifications
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- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
- C12N15/00—Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
- C12N15/09—Recombinant DNA-technology
- C12N15/10—Processes for the isolation, preparation or purification of DNA or RNA
- C12N15/1034—Isolating an individual clone by screening libraries
- C12N15/1058—Directional evolution of libraries, e.g. evolution of libraries is achieved by mutagenesis and screening or selection of mixed population of organisms
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
- C12N15/00—Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
- C12N15/09—Recombinant DNA-technology
- C12N15/10—Processes for the isolation, preparation or purification of DNA or RNA
- C12N15/1034—Isolating an individual clone by screening libraries
- C12N15/1089—Design, preparation, screening or analysis of libraries using computer algorithms
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- G—PHYSICS
- G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
- G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
- G16B35/00—ICT specially adapted for in silico combinatorial libraries of nucleic acids, proteins or peptides
-
- G—PHYSICS
- G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
- G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
- G16B35/00—ICT specially adapted for in silico combinatorial libraries of nucleic acids, proteins or peptides
- G16B35/20—Screening of libraries
-
- G—PHYSICS
- G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
- G16C—COMPUTATIONAL CHEMISTRY; CHEMOINFORMATICS; COMPUTATIONAL MATERIALS SCIENCE
- G16C20/00—Chemoinformatics, i.e. ICT specially adapted for the handling of physicochemical or structural data of chemical particles, elements, compounds or mixtures
- G16C20/60—In silico combinatorial chemistry
-
- G—PHYSICS
- G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
- G16C—COMPUTATIONAL CHEMISTRY; CHEMOINFORMATICS; COMPUTATIONAL MATERIALS SCIENCE
- G16C20/00—Chemoinformatics, i.e. ICT specially adapted for the handling of physicochemical or structural data of chemical particles, elements, compounds or mixtures
- G16C20/60—In silico combinatorial chemistry
- G16C20/64—Screening of libraries
-
- G—PHYSICS
- G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
- G16C—COMPUTATIONAL CHEMISTRY; CHEMOINFORMATICS; COMPUTATIONAL MATERIALS SCIENCE
- G16C99/00—Subject matter not provided for in other groups of this subclass
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- Engineering & Computer Science (AREA)
- Life Sciences & Earth Sciences (AREA)
- Chemical & Material Sciences (AREA)
- Health & Medical Sciences (AREA)
- Bioinformatics & Cheminformatics (AREA)
- Genetics & Genomics (AREA)
- Biotechnology (AREA)
- Physics & Mathematics (AREA)
- Bioinformatics & Computational Biology (AREA)
- General Engineering & Computer Science (AREA)
- General Health & Medical Sciences (AREA)
- Zoology (AREA)
- Wood Science & Technology (AREA)
- Organic Chemistry (AREA)
- Biomedical Technology (AREA)
- Molecular Biology (AREA)
- Biophysics (AREA)
- Biochemistry (AREA)
- Theoretical Computer Science (AREA)
- Library & Information Science (AREA)
- Crystallography & Structural Chemistry (AREA)
- Microbiology (AREA)
- Plant Pathology (AREA)
- Spectroscopy & Molecular Physics (AREA)
- Medical Informatics (AREA)
- Evolutionary Biology (AREA)
- Computing Systems (AREA)
- Analytical Chemistry (AREA)
- Ecology (AREA)
- Medicinal Chemistry (AREA)
- Enzymes And Modification Thereof (AREA)
- Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
- Apparatus Associated With Microorganisms And Enzymes (AREA)
Applications Claiming Priority (2)
| Application Number | Priority Date | Filing Date | Title |
|---|---|---|---|
| US201361883838P | 2013-09-27 | 2013-09-27 | |
| EP14781426.3A EP3049973B1 (en) | 2013-09-27 | 2014-09-26 | Automated screening of enzyme variants |
Publications (1)
| Publication Number | Publication Date |
|---|---|
| DK3418929T3 true DK3418929T3 (da) | 2021-02-01 |
Family
ID=51662390
Family Applications (2)
| Application Number | Title | Priority Date | Filing Date |
|---|---|---|---|
| DK14781426.3T DK3049973T3 (da) | 2013-09-27 | 2014-09-26 | Automatiseret screenning af enzymvarianter |
| DK18187438.9T DK3418929T3 (da) | 2013-09-27 | 2014-09-26 | Automatiseret screening af enzymvarianter |
Family Applications Before (1)
| Application Number | Title | Priority Date | Filing Date |
|---|---|---|---|
| DK14781426.3T DK3049973T3 (da) | 2013-09-27 | 2014-09-26 | Automatiseret screenning af enzymvarianter |
Country Status (15)
| Country | Link |
|---|---|
| US (3) | US10696964B2 (da) |
| EP (2) | EP3418929B1 (da) |
| JP (3) | JP6857029B2 (da) |
| KR (1) | KR102342205B1 (da) |
| CN (1) | CN105765592B (da) |
| AU (1) | AU2014324669B2 (da) |
| BR (1) | BR112016006285B1 (da) |
| CA (1) | CA2923755C (da) |
| DK (2) | DK3049973T3 (da) |
| ES (2) | ES2857711T3 (da) |
| HU (2) | HUE053049T2 (da) |
| IL (1) | IL244457B (da) |
| RU (2) | RU2019140645A (da) |
| SG (1) | SG11201601695WA (da) |
| WO (1) | WO2015048572A1 (da) |
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| HUE053363T2 (hu) | 2014-11-25 | 2021-06-28 | Codexis Inc | Módosított iminreduktázok és eljárások keton- és aminvegyületek reduktív aminálására |
| EP4234699A1 (en) | 2014-12-22 | 2023-08-30 | Codexis, Inc. | Human alpha-galactosidase variants |
| US10542961B2 (en) | 2015-06-15 | 2020-01-28 | The Research Foundation For The State University Of New York | System and method for infrasonic cardiac monitoring |
| WO2017155945A1 (en) * | 2016-03-09 | 2017-09-14 | President And Fellows Of Harvard College | Methods and systems of cell-free enzyme discovery and optimization |
| NZ755628A (en) | 2017-02-13 | 2023-09-29 | Codexis Inc | Engineered phenylalanine ammonia lyase polypeptides |
| JP6917050B2 (ja) * | 2017-03-06 | 2021-08-11 | 学校法人早稲田大学 | 最適特性を有する非天然型タンパク質の製造方法 |
| WO2018200214A2 (en) | 2017-04-27 | 2018-11-01 | Codexis, Inc. | Ketoreductase polypeptides and polynucleotides |
| BR112019023337A2 (pt) * | 2017-05-08 | 2020-06-16 | Codexis, Inc. | Ligase engenheirada, sequência de polinucleotídeo, vetor de expressão, célula hospedeira, métodos para produzir um polipeptídeo da ligase engenheirada, um produto de ligação, uma biblioteca de dna e uma pluralidade de fragmentos de dna adequados para sequenciamento, e, composição |
| EP3404567A1 (en) * | 2017-05-19 | 2018-11-21 | Fujitsu Limited | A system and a method for discovery of predicted site-specific protein phosphorylation candidates |
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| CN107832577B (zh) * | 2017-10-30 | 2021-07-13 | 中国农业大学 | 一种筛选几丁质酶OfChtⅠ抑制剂的方法 |
| CN107974484A (zh) * | 2017-11-10 | 2018-05-01 | 嘉兴欣贝莱生物科技有限公司 | 根皮素生物合成过程中查尔酮合成酶建模方法 |
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| JP7344509B2 (ja) * | 2019-09-20 | 2023-09-14 | 公立大学法人 富山県立大学 | 光学活性フルオロアルコールおよび光学活性クロロフルオロアルコールの製造方法 |
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| SG181535A1 (en) | 2009-12-08 | 2012-07-30 | Codexis Inc | Synthesis of prazole compounds |
| CN102939383B (zh) | 2009-12-30 | 2015-04-29 | 先锋国际良种公司 | 用于靶向多核苷酸修饰的方法和组合物 |
| US9267159B2 (en) | 2010-12-08 | 2016-02-23 | Codexis, Inc. | Biocatalysts and methods for the synthesis of armodafinil |
| CN102156823B (zh) * | 2011-02-18 | 2015-04-22 | 复旦大学 | 一种靶向作用于蛋白激酶非活性构象的化合物筛选方法 |
| NZ703347A (en) | 2012-06-29 | 2016-05-27 | Wisconsin Alumni Res Found | Use of 2-methylene-19-nor-(20s)-1α,25-dihydroxyvitamin d3 to treat secondary hyperparathyroidism |
| US20140303952A1 (en) | 2013-04-08 | 2014-10-09 | City University Of Hong Kong | Protein-ligand docking |
| CN103265635A (zh) * | 2013-04-28 | 2013-08-28 | 中山大学附属第一医院 | 一种通用的靶向蛋白嵌合型分子化合物的构建方法 |
| CN103324861B (zh) | 2013-07-10 | 2016-07-20 | 南京大学 | 基于分子动力学模拟的核受体介导内分泌干扰物质的虚拟筛选方法 |
| CN105765592B (zh) | 2013-09-27 | 2019-12-17 | 科德克希思公司 | 用于酶变体的自动筛选的方法、装置和系统 |
| HUE048104T2 (hu) | 2013-09-27 | 2020-05-28 | Codexis Inc | Szerkezet alapú prediktív modellezés |
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