DK1740726T3 - Påvisning og typebestemmelse af Lactobacillus-bakteriestammer - Google Patents

Påvisning og typebestemmelse af Lactobacillus-bakteriestammer

Info

Publication number
DK1740726T3
DK1740726T3 DK05856656T DK05856656T DK1740726T3 DK 1740726 T3 DK1740726 T3 DK 1740726T3 DK 05856656 T DK05856656 T DK 05856656T DK 05856656 T DK05856656 T DK 05856656T DK 1740726 T3 DK1740726 T3 DK 1740726T3
Authority
DK
Denmark
Prior art keywords
detection
bacterial strains
typing
lactobacillus bacterial
samples
Prior art date
Application number
DK05856656T
Other languages
Danish (da)
English (en)
Inventor
W Michael Russell
Rodolphe Barrangou
Philippe Horvath
Original Assignee
Danisco
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Danisco filed Critical Danisco
Application granted granted Critical
Publication of DK1740726T3 publication Critical patent/DK1740726T3/da

Links

Classifications

    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6876—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes
    • C12Q1/6888—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for detection or identification of organisms
    • C12Q1/689—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for detection or identification of organisms for bacteria
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2600/00—Oligonucleotides characterized by their use
    • C12Q2600/142—Toxicological screening, e.g. expression profiles which identify toxicity

Landscapes

  • Chemical & Material Sciences (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Analytical Chemistry (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Organic Chemistry (AREA)
  • Zoology (AREA)
  • Wood Science & Technology (AREA)
  • Health & Medical Sciences (AREA)
  • Engineering & Computer Science (AREA)
  • Microbiology (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Molecular Biology (AREA)
  • Biotechnology (AREA)
  • Biophysics (AREA)
  • Physics & Mathematics (AREA)
  • Biochemistry (AREA)
  • Immunology (AREA)
  • General Engineering & Computer Science (AREA)
  • General Health & Medical Sciences (AREA)
  • Genetics & Genomics (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
  • Micro-Organisms Or Cultivation Processes Thereof (AREA)
  • Medicines Containing Material From Animals Or Micro-Organisms (AREA)
DK05856656T 2004-04-28 2005-04-28 Påvisning og typebestemmelse af Lactobacillus-bakteriestammer DK1740726T3 (da)

Applications Claiming Priority (3)

Application Number Priority Date Filing Date Title
US56600704P 2004-04-28 2004-04-28
US11/115,873 US7919277B2 (en) 2004-04-28 2005-04-27 Detection and typing of bacterial strains
PCT/US2005/014420 WO2006073445A2 (en) 2004-04-28 2005-04-28 Detection and typing of bacterial strains

Publications (1)

Publication Number Publication Date
DK1740726T3 true DK1740726T3 (da) 2009-01-12

Family

ID=36609326

Family Applications (1)

Application Number Title Priority Date Filing Date
DK05856656T DK1740726T3 (da) 2004-04-28 2005-04-28 Påvisning og typebestemmelse af Lactobacillus-bakteriestammer

Country Status (13)

Country Link
US (4) US7919277B2 (pt)
EP (1) EP1740726B1 (pt)
JP (3) JP5683060B2 (pt)
AT (1) ATE410525T1 (pt)
AU (1) AU2005320355B2 (pt)
BR (1) BRPI0510364A (pt)
CA (1) CA2565199C (pt)
DE (1) DE602005010231D1 (pt)
DK (1) DK1740726T3 (pt)
ES (1) ES2314755T3 (pt)
NZ (1) NZ549225A (pt)
PT (1) PT1740726E (pt)
WO (1) WO2006073445A2 (pt)

Families Citing this family (71)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
DK2018441T3 (da) 2006-05-19 2012-01-02 Danisco Mærkede mikroorganismer og fremgangsmåde til mærkning
EP1997906A1 (en) * 2007-06-01 2008-12-03 Friesland Brands B.V. Lactobacillus
FR2930264B1 (fr) * 2008-04-18 2013-02-22 Gervais Danone Sa Nouvelle souche de lactobacillus paracasei subsp. paracasei dotee de proprietes antimicrobiennes et immunomodulatrices.
WO2010011961A2 (en) * 2008-07-25 2010-01-28 University Of Georgia Research Foundation, Inc. Prokaryotic rnai-like system and methods of use
EP2362915B1 (en) * 2008-11-07 2016-12-21 DuPont Nutrition Biosciences ApS Bifidobacteria crispr sequences
EP3078753B1 (en) 2010-05-10 2018-04-18 The Regents of The University of California Methods using endoribonuclease compositions
WO2012054726A1 (en) * 2010-10-20 2012-04-26 Danisco A/S Lactococcus crispr-cas sequences
GB201021399D0 (en) 2010-12-16 2011-01-26 Genetic Analysis As Oligonucleotide probe set and methods of microbiota profiling
EP3613852A3 (en) 2011-07-22 2020-04-22 President and Fellows of Harvard College Evaluation and improvement of nuclease cleavage specificity
RU2526576C2 (ru) * 2011-12-23 2014-08-27 Автономная Некоммерческая Организация "Научно-Исследовательский Центр Биотехнологии Антибиотиков И Других Биологически Активных Веществ "Биоан" Способ идентификации лактобацилл
GB201122458D0 (en) 2011-12-30 2012-02-08 Univ Wageningen Modified cascade ribonucleoproteins and uses thereof
RU2481402C1 (ru) * 2012-01-11 2013-05-10 Государственное научное учреждение Институт экспериментальной ветеринарии Сибири и Дальнего Востока Российской академии сельскохозяйственных наук (ГНУ ИЭВСиДВ Россельхозакадемии) СИНТЕТИЧЕСКИЕ ОЛИГОНУКЛЕОТИДНЫЕ ПРАЙМЕРЫ И СПОСОБ ВЫЯВЛЕНИЯ Lactobacillus acidophilus В ЗАКВАСОЧНЫХ КУЛЬТУРАХ, ИСПОЛЬЗУЕМЫХ ПРИ ПРОИЗВОДСТВЕ КИСЛОМОЛОЧНЫХ ПРОДУКТОВ
BR112014028837A2 (pt) 2012-05-21 2017-06-27 Dupont Nutrition Biosci Aps linhagens de lactobacillus.
RU2640255C2 (ru) 2012-05-21 2017-12-27 ДюПон НЬЮТРИШН БАЙОСАЙЕНСИЗ АпС Штамм propionibacterium, обладающий ингибирующей активностью против дрожжей и плесневых грибов (варианты) и его применение
PE20150336A1 (es) 2012-05-25 2015-03-25 Univ California Metodos y composiciones para la modificacion de adn objetivo dirigida por arn y para la modulacion de la transcripcion dirigida por arn
KR101844123B1 (ko) 2012-12-06 2018-04-02 시그마-알드리치 컴퍼니., 엘엘씨 Crispr-기초된 유전체 변형과 조절
ES2901396T3 (es) 2013-03-14 2022-03-22 Caribou Biosciences Inc Composiciones y métodos de ácidos nucleicos dirigidos a ácido nucleico
US10760064B2 (en) 2013-03-15 2020-09-01 The General Hospital Corporation RNA-guided targeting of genetic and epigenomic regulatory proteins to specific genomic loci
CN113563476A (zh) 2013-03-15 2021-10-29 通用医疗公司 遗传和表观遗传调节蛋白至特定基因组基因座的rna引导的靶向
US9902973B2 (en) 2013-04-11 2018-02-27 Caribou Biosciences, Inc. Methods of modifying a target nucleic acid with an argonaute
US10011850B2 (en) 2013-06-21 2018-07-03 The General Hospital Corporation Using RNA-guided FokI Nucleases (RFNs) to increase specificity for RNA-Guided Genome Editing
US20160264982A1 (en) * 2013-07-16 2016-09-15 Shanghai Institutes For Biological Sciences, Chinese Academy Of Sciences Method for plant genome site-directed modification
US9163284B2 (en) 2013-08-09 2015-10-20 President And Fellows Of Harvard College Methods for identifying a target site of a Cas9 nuclease
US9359599B2 (en) 2013-08-22 2016-06-07 President And Fellows Of Harvard College Engineered transcription activator-like effector (TALE) domains and uses thereof
US9388430B2 (en) 2013-09-06 2016-07-12 President And Fellows Of Harvard College Cas9-recombinase fusion proteins and uses thereof
US9340800B2 (en) 2013-09-06 2016-05-17 President And Fellows Of Harvard College Extended DNA-sensing GRNAS
US9737604B2 (en) 2013-09-06 2017-08-22 President And Fellows Of Harvard College Use of cationic lipids to deliver CAS9
WO2015066119A1 (en) * 2013-10-30 2015-05-07 North Carolina State University Compositions and methods related to a type-ii crispr-cas system in lactobacillus buchneri
CN106459995B (zh) 2013-11-07 2020-02-21 爱迪塔斯医药有限公司 使用统治型gRNA的CRISPR相关方法和组合物
US20150166984A1 (en) 2013-12-12 2015-06-18 President And Fellows Of Harvard College Methods for correcting alpha-antitrypsin point mutations
US10787654B2 (en) 2014-01-24 2020-09-29 North Carolina State University Methods and compositions for sequence guiding Cas9 targeting
CA2939621C (en) 2014-02-13 2019-10-15 Takara Bio Usa, Inc. Methods of depleting a target molecule from an initial collection of nucleic acids, and compositions and kits for practicing the same
CN106460003A (zh) 2014-04-08 2017-02-22 北卡罗来纳州立大学 用于使用crispr相关基因rna引导阻遏转录的方法和组合物
WO2016022363A2 (en) 2014-07-30 2016-02-11 President And Fellows Of Harvard College Cas9 proteins including ligand-dependent inteins
EP3633032A3 (en) 2014-08-28 2020-07-29 North Carolina State University Novel cas9 proteins and guiding features for dna targeting and genome editing
GB201506509D0 (en) 2015-04-16 2015-06-03 Univ Wageningen Nuclease-mediated genome editing
EP3303607A4 (en) 2015-05-29 2018-10-10 North Carolina State University Methods for screening bacteria, archaea, algae, and yeast using crispr nucleic acids
CA2983874C (en) 2015-06-15 2022-06-21 North Carolina State University Methods and compositions for efficient delivery of nucleic acids and rna-based antimicrobials
US10648020B2 (en) 2015-06-18 2020-05-12 The Broad Institute, Inc. CRISPR enzymes and systems
US9790490B2 (en) * 2015-06-18 2017-10-17 The Broad Institute Inc. CRISPR enzymes and systems
AU2016285724A1 (en) 2015-06-29 2017-11-16 Ionis Pharmaceuticals, Inc. Modified CRISPR RNA and modified single CRISPR RNA and uses thereof
US9926546B2 (en) 2015-08-28 2018-03-27 The General Hospital Corporation Engineered CRISPR-Cas9 nucleases
US9512446B1 (en) 2015-08-28 2016-12-06 The General Hospital Corporation Engineered CRISPR-Cas9 nucleases
EP3356533A1 (en) 2015-09-28 2018-08-08 North Carolina State University Methods and compositions for sequence specific antimicrobials
IL258821B (en) 2015-10-23 2022-07-01 Harvard College Nucleobase editors and their uses
CA3026112A1 (en) 2016-04-19 2017-10-26 The Broad Institute, Inc. Cpf1 complexes with reduced indel activity
WO2017209990A1 (en) 2016-05-31 2017-12-07 Exxonmobil Upstream Research Company METHODS FOR lSOLATING NUCLEIC ACIDS FROM SAMPLES
WO2018005522A1 (en) 2016-07-01 2018-01-04 Exxonmobil Upstream Research Company Methods for identifying hydrocarbon reservoirs
SG11201900907YA (en) 2016-08-03 2019-02-27 Harvard College Adenosine nucleobase editors and uses thereof
US11661590B2 (en) 2016-08-09 2023-05-30 President And Fellows Of Harvard College Programmable CAS9-recombinase fusion proteins and uses thereof
US11542509B2 (en) 2016-08-24 2023-01-03 President And Fellows Of Harvard College Incorporation of unnatural amino acids into proteins using base editing
GB2573062A (en) 2016-10-14 2019-10-23 Harvard College AAV delivery of nucleobase editors
WO2018119359A1 (en) 2016-12-23 2018-06-28 President And Fellows Of Harvard College Editing of ccr5 receptor gene to protect against hiv infection
EP3592853A1 (en) 2017-03-09 2020-01-15 President and Fellows of Harvard College Suppression of pain by gene editing
WO2018165629A1 (en) 2017-03-10 2018-09-13 President And Fellows Of Harvard College Cytosine to guanine base editor
CA3057192A1 (en) 2017-03-23 2018-09-27 President And Fellows Of Harvard College Nucleobase editors comprising nucleic acid programmable dna binding proteins
US11560566B2 (en) 2017-05-12 2023-01-24 President And Fellows Of Harvard College Aptazyme-embedded guide RNAs for use with CRISPR-Cas9 in genome editing and transcriptional activation
JP2020534795A (ja) 2017-07-28 2020-12-03 プレジデント アンド フェローズ オブ ハーバード カレッジ ファージによって支援される連続的進化（ｐａｃｅ）を用いて塩基編集因子を進化させるための方法および組成物
US11319532B2 (en) 2017-08-30 2022-05-03 President And Fellows Of Harvard College High efficiency base editors comprising Gam
US11795443B2 (en) 2017-10-16 2023-10-24 The Broad Institute, Inc. Uses of adenosine base editors
KR102444745B1 (ko) * 2017-11-29 2022-09-19 한국식품연구원 Lactobacillus acidophilus 균주 판별용 조성물 및 이를 이용한 판별방법
WO2019147743A1 (en) 2018-01-26 2019-08-01 Massachusetts Institute Of Technology Structure-guided chemical modification of guide rna and its applications
US20190316166A1 (en) * 2018-04-12 2019-10-17 Exxonmobil Research And Engineering Company Molecular biology method to determine the connectivity within a reservoir, the efficacy of secondary enhanced oil recovery, and leakage out of zone
KR102142474B1 (ko) * 2019-04-08 2020-08-07 한국식품연구원 Lactobacillus acidophilus YT1 균주 판별용 조성물 및 이를 이용한 판별방법
US20220154250A1 (en) * 2018-09-21 2022-05-19 Korea Food Research Institute Composition for discriminating lactobacillus acidophilus strains and discrimination method using same
KR102142473B1 (ko) * 2019-04-08 2020-08-07 한국식품연구원 락토바실러스 속 중에서 특정 종을 특이적으로 판별하기 위한 프라이머 조성물 및 이를 이용한 판별방법
WO2020072248A1 (en) * 2018-10-01 2020-04-09 North Carolina State University Recombinant type i crispr-cas system
US20220177943A1 (en) * 2018-10-01 2022-06-09 Rodolphe Barrangou Recombinant type i crispr-cas system and uses thereof for screening for variant cells
CN111378775A (zh) * 2018-12-28 2020-07-07 江苏省农业科学院 一种特异性检测水稻稻曲病菌的方法及其应用
WO2020191153A2 (en) 2019-03-19 2020-09-24 The Broad Institute, Inc. Methods and compositions for editing nucleotide sequences
KR20230019843A (ko) 2020-05-08 2023-02-09 더 브로드 인스티튜트, 인코퍼레이티드 표적 이중 가닥 뉴클레오티드 서열의 두 가닥의 동시 편집을 위한 방법 및 조성물

Family Cites Families (17)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US4683195A (en) 1986-01-30 1987-07-28 Cetus Corporation Process for amplifying, detecting, and/or-cloning nucleic acid sequences
US4683202A (en) 1985-03-28 1987-07-28 Cetus Corporation Process for amplifying nucleic acid sequences
US5869283A (en) * 1988-05-06 1999-02-09 Roussel Uclaf Expression cassette operable in a recombinant host
US5412087A (en) 1992-04-24 1995-05-02 Affymax Technologies N.V. Spatially-addressable immobilization of oligonucleotides and other biological polymers on surfaces
IL103935A0 (en) * 1991-12-04 1993-05-13 Du Pont Method for the identification of microorganisms by the utilization of directed and arbitrary dna amplification
US6395475B1 (en) * 1993-05-18 2002-05-28 Florida State University Semiautomated method for finger-printing bacterial DNA
EP0705271B1 (en) 1993-06-25 2002-11-13 Affymetrix, Inc. (a Delaware Corporation) Hybridization and sequencing of nucleic acids
US5861242A (en) 1993-06-25 1999-01-19 Affymetrix, Inc. Array of nucleic acid probes on biological chips for diagnosis of HIV and methods of using the same
US5837832A (en) 1993-06-25 1998-11-17 Affymetrix, Inc. Arrays of nucleic acid probes on biological chips
US5545531A (en) 1995-06-07 1996-08-13 Affymax Technologies N.V. Methods for making a device for concurrently processing multiple biological chip assays
US6833242B2 (en) * 1997-09-23 2004-12-21 California Institute Of Technology Methods for detecting and sorting polynucleotides based on size
US6661836B1 (en) * 1998-10-21 2003-12-09 Nptest, Llp Measuring jitter of high-speed data channels
US6610836B1 (en) * 1999-01-29 2003-08-26 Genome Therapeutics Corporation Nucleic acid amino acid sequences relating to Klebsiella pneumoniae for diagnostics and therapeutics
WO2001081543A2 (en) * 2000-04-26 2001-11-01 The Regents Of The University Of California Multilocus repetitive dna sequences for genotyping bacillus anthracis and related bacteria
US20030219778A1 (en) * 2000-08-29 2003-11-27 Universidade Federal De Minas Gerais - Ufmg Method for the diagnosis, identification and characterization of M. tuberculosis and other mycobacteria by shift mobility assay
EP1816196A1 (en) * 2002-04-09 2007-08-08 Societe Des Produits Nestle S.A. La1 - The genome of a Lactobacillus strain
EP1814995A2 (en) 2004-10-27 2007-08-08 North Carolina State University Lactobacillus acidophilus nucleic acids and uses thereof

Also Published As

Publication number Publication date
BRPI0510364A (pt) 2007-11-06
JP2015037429A (ja) 2015-02-26
EP1740726B1 (en) 2008-10-08
JP2007535325A (ja) 2007-12-06
CA2565199A1 (en) 2006-07-13
AU2005320355B2 (en) 2010-01-07
ES2314755T3 (es) 2009-03-16
US20060199190A1 (en) 2006-09-07
US20130158245A1 (en) 2013-06-20
JP5683060B2 (ja) 2015-03-11
CA2565199C (en) 2015-07-07
DE602005010231D1 (de) 2008-11-20
JP5806841B2 (ja) 2015-11-10
JP2011139713A (ja) 2011-07-21
US7919277B2 (en) 2011-04-05
ATE410525T1 (de) 2008-10-15
US20110300541A1 (en) 2011-12-08
PT1740726E (pt) 2008-11-13
EP1740726A2 (en) 2007-01-10
US20150056628A1 (en) 2015-02-26
WO2006073445A2 (en) 2006-07-13
WO2006073445A3 (en) 2006-09-28
US8361725B2 (en) 2013-01-29
NZ549225A (en) 2009-08-28
AU2005320355A8 (en) 2008-09-18
AU2005320355A1 (en) 2006-09-07

Similar Documents

Publication Publication Date Title
DK1740726T3 (da) Påvisning og typebestemmelse af Lactobacillus-bakteriestammer
MX2009012140A (es) Procesamiento de polisacaridos naturales mediante microorganismos no patogenos seleccionados y metodos de fabricacion y uso de los mismos.
HK1109804A1 (en) Proteolipid membrane and lipid membrane biosensor
WO2007053731A3 (en) Expression of soluble factor viii proteins in bacteria
BRPI0918641A8 (pt) Produtos infantis pró-bióticos.
WO2007136815A3 (en) Tagged microorganisms and methods of tagging
SG165353A1 (en) Improved human interferon molecules and their uses
MX356086B (es) Produccion de acidos grasos y derivados de los mismos.
HK1160730A1 (en) Probiotic infant products
MY162245A (en) Nutrition with non-viable bifidabacterium and non-digestible
EP3623465A3 (en) Production of fatty acids and derivatives thereof
GB0906322D0 (en) Immobilized product tolerant microorganisms
DK1607476T3 (da) Mikroorganisme isoleret fra kefirkorn, mikroorganismekulturer og produkter, der indeholder sådanne mikroorganismer eller mikroorganismekulturer
CY1114087T1 (el) Τροφη που περιεχει αραβινοξυλανη και ολιγοσακχαριτες
ZA200800978B (en) Food products comprising probiotic micro-organisms and antibodies
MY149886A (en) Novel strains of lactobacillus helveticus
Shu et al. Characterization of goat milk hydrolyzed by cell envelope proteinases from Lactobacillus plantarum LP69: Proteolytic system optimization, bioactivity, and storage stability evaluation
ATE405634T1 (de) Biomasse angereichert an selenium, verfahren zu deren herstellung, und solche biomasse enthaltende, probiotische und diätetische produkte
WO2010056144A3 (en) Foxp3+ natural kiler t-cells and the treatment of immune related diseases
WO2008054595A3 (en) Drug controlled molecular tags
HK1112928A1 (en) Cspcna isoform modifications and uses thereof
EP2484759A3 (en) Methods of refolding mammalian glycosyltransferases
EP1607096A3 (en) Nutraceutical composition containing milk enzymes useful as synbiotic
DK1332223T3 (da) Fremgangsmåde til screening for probiotiske stammer af slægten Bifidobacterium
Ishibashi et al. Laboratory culture of the myxomycete Didymium squamulosum and its production of clionasterol