BRPI0510364A - detecção e tipagem de cepas bacterianas - Google Patents

detecção e tipagem de cepas bacterianas

Info

Publication number
BRPI0510364A
BRPI0510364A BRPI0510364-9A BRPI0510364A BRPI0510364A BR PI0510364 A BRPI0510364 A BR PI0510364A BR PI0510364 A BRPI0510364 A BR PI0510364A BR PI0510364 A BRPI0510364 A BR PI0510364A
Authority
BR
Brazil
Prior art keywords
detection
bacterial strains
typing
samples
studying
Prior art date
Application number
BRPI0510364-9A
Other languages
English (en)
Inventor
W Michael Russell
Rodolphe Barrangou
Phlippe Horvath
Original Assignee
Danisco
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Danisco filed Critical Danisco
Publication of BRPI0510364A publication Critical patent/BRPI0510364A/pt

Links

Classifications

    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6876—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes
    • C12Q1/6888—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for detection or identification of organisms
    • C12Q1/689—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for detection or identification of organisms for bacteria
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2600/00—Oligonucleotides characterized by their use
    • C12Q2600/142—Toxicological screening, e.g. expression profiles which identify toxicity

Landscapes

  • Chemical & Material Sciences (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Analytical Chemistry (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Organic Chemistry (AREA)
  • Zoology (AREA)
  • Wood Science & Technology (AREA)
  • Health & Medical Sciences (AREA)
  • Engineering & Computer Science (AREA)
  • Microbiology (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Molecular Biology (AREA)
  • Biotechnology (AREA)
  • Biophysics (AREA)
  • Physics & Mathematics (AREA)
  • Biochemistry (AREA)
  • Immunology (AREA)
  • General Engineering & Computer Science (AREA)
  • General Health & Medical Sciences (AREA)
  • Genetics & Genomics (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
  • Micro-Organisms Or Cultivation Processes Thereof (AREA)
  • Medicines Containing Material From Animals Or Micro-Organisms (AREA)

Abstract

DETECçãO E TIPAGEM DE CEPAS BACTERIANAS. Métodos para a detecção e tipagem de cepas bacterianas de produtos alimentícios e suplementos dietéticos, amostras ambientais, amostras in vivo/in vitro e para estudar a diversidade natural das espécies são descritos. Aplicações potenciais incluem desenvolvimento de produtos e/ou detecção e diferenciação de novas cepas bacterianas.
BRPI0510364-9A 2004-04-28 2005-04-28 detecção e tipagem de cepas bacterianas BRPI0510364A (pt)

Applications Claiming Priority (3)

Application Number Priority Date Filing Date Title
US56600704P 2004-04-28 2004-04-28
US11/115,873 US7919277B2 (en) 2004-04-28 2005-04-27 Detection and typing of bacterial strains
PCT/US2005/014420 WO2006073445A2 (en) 2004-04-28 2005-04-28 Detection and typing of bacterial strains

Publications (1)

Publication Number Publication Date
BRPI0510364A true BRPI0510364A (pt) 2007-11-06

Family

ID=36609326

Family Applications (1)

Application Number Title Priority Date Filing Date
BRPI0510364-9A BRPI0510364A (pt) 2004-04-28 2005-04-28 detecção e tipagem de cepas bacterianas

Country Status (13)

Country Link
US (4) US7919277B2 (pt)
EP (1) EP1740726B1 (pt)
JP (3) JP5683060B2 (pt)
AT (1) ATE410525T1 (pt)
AU (1) AU2005320355B2 (pt)
BR (1) BRPI0510364A (pt)
CA (1) CA2565199C (pt)
DE (1) DE602005010231D1 (pt)
DK (1) DK1740726T3 (pt)
ES (1) ES2314755T3 (pt)
NZ (1) NZ549225A (pt)
PT (1) PT1740726E (pt)
WO (1) WO2006073445A2 (pt)

Families Citing this family (71)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
ATE530669T1 (de) * 2006-05-19 2011-11-15 Danisco Markierte mikroorganismen und entsprechende markierungsverfahren
EP1997906A1 (en) * 2007-06-01 2008-12-03 Friesland Brands B.V. Lactobacillus
FR2930264B1 (fr) * 2008-04-18 2013-02-22 Gervais Danone Sa Nouvelle souche de lactobacillus paracasei subsp. paracasei dotee de proprietes antimicrobiennes et immunomodulatrices.
US8546553B2 (en) * 2008-07-25 2013-10-01 University Of Georgia Research Foundation, Inc. Prokaryotic RNAi-like system and methods of use
MX337838B (es) * 2008-11-07 2016-03-22 Dupont Nutrition Biosci Aps Secuencias de repetidos palindromicos cortos regularmente intercalados agrupados de bifidobacterias.
SG185481A1 (en) 2010-05-10 2012-12-28 Univ California Endoribonuclease compositions and methods of use thereof
EP2630156B1 (en) * 2010-10-20 2018-08-22 DuPont Nutrition Biosciences ApS Lactococcus crispr-cas sequences
GB201021399D0 (en) * 2010-12-16 2011-01-26 Genetic Analysis As Oligonucleotide probe set and methods of microbiota profiling
WO2013066438A2 (en) 2011-07-22 2013-05-10 President And Fellows Of Harvard College Evaluation and improvement of nuclease cleavage specificity
RU2526576C2 (ru) * 2011-12-23 2014-08-27 Автономная Некоммерческая Организация "Научно-Исследовательский Центр Биотехнологии Антибиотиков И Других Биологически Активных Веществ "Биоан" Способ идентификации лактобацилл
GB201122458D0 (en) 2011-12-30 2012-02-08 Univ Wageningen Modified cascade ribonucleoproteins and uses thereof
RU2481402C1 (ru) * 2012-01-11 2013-05-10 Государственное научное учреждение Институт экспериментальной ветеринарии Сибири и Дальнего Востока Российской академии сельскохозяйственных наук (ГНУ ИЭВСиДВ Россельхозакадемии) СИНТЕТИЧЕСКИЕ ОЛИГОНУКЛЕОТИДНЫЕ ПРАЙМЕРЫ И СПОСОБ ВЫЯВЛЕНИЯ Lactobacillus acidophilus В ЗАКВАСОЧНЫХ КУЛЬТУРАХ, ИСПОЛЬЗУЕМЫХ ПРИ ПРОИЗВОДСТВЕ КИСЛОМОЛОЧНЫХ ПРОДУКТОВ
DK2852691T3 (da) 2012-05-21 2017-11-27 Dupont Nutrition Biosci Aps Lactobacillusstammer med antimykotiske egenskaber
WO2013174793A1 (en) 2012-05-21 2013-11-28 Dupont Nutrition Biosciences Aps Strains of propionibacterium
LT3401400T (lt) 2012-05-25 2019-06-10 The Regents Of The University Of California Būdai ir kompozicijos, skirtos rnr molekulės nukreipiamai tikslinės dnr modifikacijai ir rnr molekulės nukreipiamam transkripcijos moduliavimui
EP3138911B1 (en) 2012-12-06 2018-12-05 Sigma Aldrich Co. LLC Crispr-based genome modification and regulation
KR101780885B1 (ko) 2013-03-14 2017-10-11 카리부 바이오사이언시스 인코포레이티드 핵산-표적화 핵산의 조성물 및 방법
CA2906553C (en) 2013-03-15 2022-08-02 The General Hospital Corporation Rna-guided targeting of genetic and epigenomic regulatory proteins to specific genomic loci
US10760064B2 (en) 2013-03-15 2020-09-01 The General Hospital Corporation RNA-guided targeting of genetic and epigenomic regulatory proteins to specific genomic loci
US9902973B2 (en) 2013-04-11 2018-02-27 Caribou Biosciences, Inc. Methods of modifying a target nucleic acid with an argonaute
US10011850B2 (en) 2013-06-21 2018-07-03 The General Hospital Corporation Using RNA-guided FokI Nucleases (RFNs) to increase specificity for RNA-Guided Genome Editing
WO2015007194A1 (zh) * 2013-07-16 2015-01-22 中国科学院上海生命科学研究院 植物基因组定点修饰方法
US9163284B2 (en) 2013-08-09 2015-10-20 President And Fellows Of Harvard College Methods for identifying a target site of a Cas9 nuclease
US9359599B2 (en) 2013-08-22 2016-06-07 President And Fellows Of Harvard College Engineered transcription activator-like effector (TALE) domains and uses thereof
US9526784B2 (en) 2013-09-06 2016-12-27 President And Fellows Of Harvard College Delivery system for functional nucleases
US9228207B2 (en) 2013-09-06 2016-01-05 President And Fellows Of Harvard College Switchable gRNAs comprising aptamers
US9322037B2 (en) 2013-09-06 2016-04-26 President And Fellows Of Harvard College Cas9-FokI fusion proteins and uses thereof
US10584358B2 (en) 2013-10-30 2020-03-10 North Carolina State University Compositions and methods related to a type-II CRISPR-Cas system in Lactobacillus buchneri
LT3066201T (lt) 2013-11-07 2018-08-10 Editas Medicine, Inc. Su crispr susiję būdai ir kompozicijos su valdančiomis grnr
US20150165054A1 (en) 2013-12-12 2015-06-18 President And Fellows Of Harvard College Methods for correcting caspase-9 point mutations
US10787654B2 (en) 2014-01-24 2020-09-29 North Carolina State University Methods and compositions for sequence guiding Cas9 targeting
CN106232814B (zh) 2014-02-13 2021-05-11 宝生物工程（美国)有限公司 从核酸的初始集合中耗尽靶分子的方法、以及用于实践其的组合物和试剂盒
WO2015155686A2 (en) 2014-04-08 2015-10-15 North Carolina State University Methods and compositions for rna-directed repression of transcription using crispr-associated genes
US10077453B2 (en) 2014-07-30 2018-09-18 President And Fellows Of Harvard College CAS9 proteins including ligand-dependent inteins
EP3186375A4 (en) 2014-08-28 2019-03-13 North Carolina State University NEW CAS9 PROTEINS AND GUIDING ELEMENTS FOR DNA TARGETING AND THE GENOME EDITION
GB201506509D0 (en) 2015-04-16 2015-06-03 Univ Wageningen Nuclease-mediated genome editing
KR102451796B1 (ko) 2015-05-29 2022-10-06 노쓰 캐롤라이나 스테이트 유니버시티 크리스퍼 핵산을 사용하여 박테리아, 고세균, 조류 및 효모를 스크리닝하는 방법
KR20220158846A (ko) 2015-06-15 2022-12-01 노쓰 캐롤라이나 스테이트 유니버시티 핵산 및 rna-기반 항미생물제를 효율적으로 전달하기 위한 방법 및 조성물
US10648020B2 (en) 2015-06-18 2020-05-12 The Broad Institute, Inc. CRISPR enzymes and systems
US9790490B2 (en) * 2015-06-18 2017-10-17 The Broad Institute Inc. CRISPR enzymes and systems
EP3313989A4 (en) 2015-06-29 2018-12-05 Ionis Pharmaceuticals, Inc. Modified crispr rna and modified single crispr rna and uses thereof
US9926546B2 (en) 2015-08-28 2018-03-27 The General Hospital Corporation Engineered CRISPR-Cas9 nucleases
US9512446B1 (en) 2015-08-28 2016-12-06 The General Hospital Corporation Engineered CRISPR-Cas9 nucleases
US11286480B2 (en) 2015-09-28 2022-03-29 North Carolina State University Methods and compositions for sequence specific antimicrobials
EP3365357B1 (en) 2015-10-23 2024-02-14 President and Fellows of Harvard College Evolved cas9 proteins for gene editing
CA3026112A1 (en) 2016-04-19 2017-10-26 The Broad Institute, Inc. Cpf1 complexes with reduced indel activity
US10724108B2 (en) 2016-05-31 2020-07-28 Exxonmobil Upstream Research Company Methods for isolating nucleic acids from samples
US10663618B2 (en) 2016-07-01 2020-05-26 Exxonmobil Upstream Research Company Methods to determine conditions of a hydrocarbon reservoir
AU2017306676B2 (en) 2016-08-03 2024-02-22 President And Fellows Of Harvard College Adenosine nucleobase editors and uses thereof
AU2017308889B2 (en) 2016-08-09 2023-11-09 President And Fellows Of Harvard College Programmable Cas9-recombinase fusion proteins and uses thereof
US11542509B2 (en) 2016-08-24 2023-01-03 President And Fellows Of Harvard College Incorporation of unnatural amino acids into proteins using base editing
SG11201903089RA (en) 2016-10-14 2019-05-30 Harvard College Aav delivery of nucleobase editors
WO2018119359A1 (en) 2016-12-23 2018-06-28 President And Fellows Of Harvard College Editing of ccr5 receptor gene to protect against hiv infection
WO2018165504A1 (en) 2017-03-09 2018-09-13 President And Fellows Of Harvard College Suppression of pain by gene editing
US11542496B2 (en) 2017-03-10 2023-01-03 President And Fellows Of Harvard College Cytosine to guanine base editor
IL306092A (en) 2017-03-23 2023-11-01 Harvard College Nucleic base editors that include nucleic acid programmable DNA binding proteins
WO2018209320A1 (en) 2017-05-12 2018-11-15 President And Fellows Of Harvard College Aptazyme-embedded guide rnas for use with crispr-cas9 in genome editing and transcriptional activation
JP2020534795A (ja) 2017-07-28 2020-12-03 プレジデント アンド フェローズ オブ ハーバード カレッジ ファージによって支援される連続的進化（ｐａｃｅ）を用いて塩基編集因子を進化させるための方法および組成物
WO2019139645A2 (en) 2017-08-30 2019-07-18 President And Fellows Of Harvard College High efficiency base editors comprising gam
US11795443B2 (en) 2017-10-16 2023-10-24 The Broad Institute, Inc. Uses of adenosine base editors
KR102444745B1 (ko) * 2017-11-29 2022-09-19 한국식품연구원 Lactobacillus acidophilus 균주 판별용 조성물 및 이를 이용한 판별방법
WO2019147743A1 (en) 2018-01-26 2019-08-01 Massachusetts Institute Of Technology Structure-guided chemical modification of guide rna and its applications
US20190316166A1 (en) * 2018-04-12 2019-10-17 Exxonmobil Research And Engineering Company Molecular biology method to determine the connectivity within a reservoir, the efficacy of secondary enhanced oil recovery, and leakage out of zone
KR102142474B1 (ko) * 2019-04-08 2020-08-07 한국식품연구원 Lactobacillus acidophilus YT1 균주 판별용 조성물 및 이를 이용한 판별방법
WO2020060003A1 (ko) * 2018-09-21 2020-03-26 한국식품연구원 락토바실러스 애시도필러스 균주 판별용 조성물 및 이를 이용한 판별방법
KR102142473B1 (ko) * 2019-04-08 2020-08-07 한국식품연구원 락토바실러스 속 중에서 특정 종을 특이적으로 판별하기 위한 프라이머 조성물 및 이를 이용한 판별방법
US10711267B2 (en) * 2018-10-01 2020-07-14 North Carolina State University Recombinant type I CRISPR-Cas system
US20220177943A1 (en) * 2018-10-01 2022-06-09 Rodolphe Barrangou Recombinant type i crispr-cas system and uses thereof for screening for variant cells
CN111378775A (zh) * 2018-12-28 2020-07-07 江苏省农业科学院 一种特异性检测水稻稻曲病菌的方法及其应用
JP2022526908A (ja) 2019-03-19 2022-05-27 ザ ブロード インスティテュート，インコーポレーテッド 編集ヌクレオチド配列を編集するための方法および組成物
AU2021267940A1 (en) 2020-05-08 2022-12-08 President And Fellows Of Harvard College Methods and compositions for simultaneous editing of both strands of a target double-stranded nucleotide sequence

Family Cites Families (17)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US4683202A (en) 1985-03-28 1987-07-28 Cetus Corporation Process for amplifying nucleic acid sequences
US4683195A (en) 1986-01-30 1987-07-28 Cetus Corporation Process for amplifying, detecting, and/or-cloning nucleic acid sequences
US5869283A (en) 1988-05-06 1999-02-09 Roussel Uclaf Expression cassette operable in a recombinant host
US5412087A (en) 1992-04-24 1995-05-02 Affymax Technologies N.V. Spatially-addressable immobilization of oligonucleotides and other biological polymers on surfaces
IL103935A0 (en) 1991-12-04 1993-05-13 Du Pont Method for the identification of microorganisms by the utilization of directed and arbitrary dna amplification
US6395475B1 (en) 1993-05-18 2002-05-28 Florida State University Semiautomated method for finger-printing bacterial DNA
US5837832A (en) 1993-06-25 1998-11-17 Affymetrix, Inc. Arrays of nucleic acid probes on biological chips
US5861242A (en) 1993-06-25 1999-01-19 Affymetrix, Inc. Array of nucleic acid probes on biological chips for diagnosis of HIV and methods of using the same
WO1995000530A1 (en) 1993-06-25 1995-01-05 Affymax Technologies N.V. Hybridization and sequencing of nucleic acids
US5545531A (en) 1995-06-07 1996-08-13 Affymax Technologies N.V. Methods for making a device for concurrently processing multiple biological chip assays
US6833242B2 (en) 1997-09-23 2004-12-21 California Institute Of Technology Methods for detecting and sorting polynucleotides based on size
US6661836B1 (en) * 1998-10-21 2003-12-09 Nptest, Llp Measuring jitter of high-speed data channels
US6610836B1 (en) 1999-01-29 2003-08-26 Genome Therapeutics Corporation Nucleic acid amino acid sequences relating to Klebsiella pneumoniae for diagnostics and therapeutics
WO2001081543A2 (en) 2000-04-26 2001-11-01 The Regents Of The University Of California Multilocus repetitive dna sequences for genotyping bacillus anthracis and related bacteria
US20030219778A1 (en) 2000-08-29 2003-11-27 Universidade Federal De Minas Gerais - Ufmg Method for the diagnosis, identification and characterization of M. tuberculosis and other mycobacteria by shift mobility assay
DE60322689D1 (de) 2002-04-09 2008-09-18 Nestle Sa La1- das genom von einem lactobacillus stamm
EP1814995A2 (en) 2004-10-27 2007-08-08 North Carolina State University Lactobacillus acidophilus nucleic acids and uses thereof

Also Published As

Publication number Publication date
NZ549225A (en) 2009-08-28
EP1740726A2 (en) 2007-01-10
JP2011139713A (ja) 2011-07-21
ATE410525T1 (de) 2008-10-15
JP5806841B2 (ja) 2015-11-10
US20060199190A1 (en) 2006-09-07
US20130158245A1 (en) 2013-06-20
WO2006073445A2 (en) 2006-07-13
CA2565199A1 (en) 2006-07-13
AU2005320355B2 (en) 2010-01-07
US8361725B2 (en) 2013-01-29
CA2565199C (en) 2015-07-07
AU2005320355A1 (en) 2006-09-07
ES2314755T3 (es) 2009-03-16
DE602005010231D1 (de) 2008-11-20
AU2005320355A8 (en) 2008-09-18
US20110300541A1 (en) 2011-12-08
US7919277B2 (en) 2011-04-05
PT1740726E (pt) 2008-11-13
JP2007535325A (ja) 2007-12-06
JP5683060B2 (ja) 2015-03-11
WO2006073445A3 (en) 2006-09-28
US20150056628A1 (en) 2015-02-26
JP2015037429A (ja) 2015-02-26
DK1740726T3 (da) 2009-01-12
EP1740726B1 (en) 2008-10-08

Similar Documents

Publication Publication Date Title
BRPI0510364A (pt) detecção e tipagem de cepas bacterianas
HK1109804A1 (en) Proteolipid membrane and lipid membrane biosensor
WO2007053731A3 (en) Expression of soluble factor viii proteins in bacteria
BRPI0918641A8 (pt) Produtos infantis pró-bióticos.
MX2009012140A (es) Procesamiento de polisacaridos naturales mediante microorganismos no patogenos seleccionados y metodos de fabricacion y uso de los mismos.
EP3623465A3 (en) Production of fatty acids and derivatives thereof
MX356086B (es) Produccion de acidos grasos y derivados de los mismos.
PL2018441T3 (pl) Mikroorganizmy znakowane i sposoby znakowania
SG165353A1 (en) Improved human interferon molecules and their uses
WO2007140231A3 (en) Low molecular weight heparin composition and uses thereof
WO2009077864A3 (en) Compositions and methods of detecting tiabs
HK1160730A1 (en) Probiotic infant products
WO2007136893A3 (en) Anti-fgf19 antibodies and methods using same
CY1114087T1 (el) Τροφη που περιεχει αραβινοξυλανη και ολιγοσακχαριτες
GB0906322D0 (en) Immobilized product tolerant microorganisms
MX2008002149A (es) Composiciones de arnt y sus usos.
WO2006091924A3 (en) Producing carotenoids
DK1607476T3 (da) Mikroorganisme isoleret fra kefirkorn, mikroorganismekulturer og produkter, der indeholder sådanne mikroorganismer eller mikroorganismekulturer
GB2453068A (en) Novel hepatocyte-like cells and hepatoblast-like cells derived from hbs cells
WO2007001962A3 (en) Systems and methods for generating biological material
WO2008085962A3 (en) Cell culture methods for producing recombinant proteins in the presence of reduced levels of one or more contaminants
CL2007001552A1 (es) Metodo para producir planta de trigo con alto contenido de proteinas que comprende introducir el gen ahasl1a s653n, metodo de generacion de harina de trigo con alto contenido de proteinas, y producto alimenticio que la comprende.
WO2009082445A3 (en) Novel devices for the detection of the presence and/or activity of proteases in biological samples
WO2008054595A3 (en) Drug controlled molecular tags
HK1112928A1 (en) Cspcna isoform modifications and uses thereof

Legal Events

Date Code Title Description
B06F Objections, documents and/or translations needed after an examination request according [chapter 6.6 patent gazette]
B25D Requested change of name of applicant approved

Owner name: DUPONT NUTRITION BIOSCIENCES APS (DK)

B06A Patent application procedure suspended [chapter 6.1 patent gazette]
B11B Dismissal acc. art. 36, par 1 of ipl - no reply within 90 days to fullfil the necessary requirements