DE602006013831D1 - Verbesserte strategien zur sequenzierung komplexer genome unter verwendung von sequenziertechniken mit hohem durchsatz - Google Patents

Verbesserte strategien zur sequenzierung komplexer genome unter verwendung von sequenziertechniken mit hohem durchsatz

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Publication number
DE602006013831D1
DE602006013831D1 DE602006013831T DE602006013831T DE602006013831D1 DE 602006013831 D1 DE602006013831 D1 DE 602006013831D1 DE 602006013831 T DE602006013831 T DE 602006013831T DE 602006013831 T DE602006013831 T DE 602006013831T DE 602006013831 D1 DE602006013831 D1 DE 602006013831D1
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Germany
Prior art keywords
sequence
sequencing
fragments
genome
primer
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DE602006013831T
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English (en)
Inventor
Eijk Michael Josephus Van
Anker Preben Soerensen
Rene Cornelis Hogers
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Keygene NV
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Keygene NV
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Publication of DE602006013831D1 publication Critical patent/DE602006013831D1/de
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    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6813—Hybridisation assays
    • C12Q1/6827—Hybridisation assays for detection of mutation or polymorphism
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6869—Methods for sequencing

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  • Chemical & Material Sciences (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Organic Chemistry (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Health & Medical Sciences (AREA)
  • Wood Science & Technology (AREA)
  • Zoology (AREA)
  • Engineering & Computer Science (AREA)
  • Biochemistry (AREA)
  • General Engineering & Computer Science (AREA)
  • Microbiology (AREA)
  • Molecular Biology (AREA)
  • Analytical Chemistry (AREA)
  • Biotechnology (AREA)
  • Physics & Mathematics (AREA)
  • Biophysics (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Immunology (AREA)
  • General Health & Medical Sciences (AREA)
  • Genetics & Genomics (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
  • Heterocyclic Carbon Compounds Containing A Hetero Ring Having Oxygen Or Sulfur (AREA)
  • Saccharide Compounds (AREA)
  • Medicines Containing Plant Substances (AREA)
  • Investigating Or Analysing Biological Materials (AREA)
DE602006013831T 2005-06-23 2006-06-23 Verbesserte strategien zur sequenzierung komplexer genome unter verwendung von sequenziertechniken mit hohem durchsatz Active DE602006013831D1 (de)

Applications Claiming Priority (5)

Application Number Priority Date Filing Date Title
US69305305P 2005-06-23 2005-06-23
US71489705P 2005-09-08 2005-09-08
EP06075104 2006-01-16
US75903406P 2006-01-17 2006-01-17
PCT/NL2006/000312 WO2006137734A1 (en) 2005-06-23 2006-06-23 Improved strategies for sequencing complex genomes using high throughput sequencing technologies

Publications (1)

Publication Number Publication Date
DE602006013831D1 true DE602006013831D1 (de) 2010-06-02

Family

ID=36950154

Family Applications (1)

Application Number Title Priority Date Filing Date
DE602006013831T Active DE602006013831D1 (de) 2005-06-23 2006-06-23 Verbesserte strategien zur sequenzierung komplexer genome unter verwendung von sequenziertechniken mit hohem durchsatz

Country Status (11)

Country Link
US (1) US20090142758A1 (de)
EP (1) EP1910563B1 (de)
JP (1) JP2008546405A (de)
CN (1) CN101278058A (de)
AT (1) ATE465274T1 (de)
AU (1) AU2006259990B2 (de)
CA (1) CA2613248A1 (de)
DE (1) DE602006013831D1 (de)
DK (1) DK1910562T3 (de)
ES (2) ES2357549T3 (de)
WO (1) WO2006137734A1 (de)

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CN101641449B (zh) 2005-06-23 2014-01-29 科因股份有限公司 用于多态性的高通量鉴定和检测的策略
US10316364B2 (en) 2005-09-29 2019-06-11 Keygene N.V. Method for identifying the source of an amplicon
ATE453728T1 (de) 2005-09-29 2010-01-15 Keygene Nv Screening mutagenisierter populationen mit hohem durchsatz
DK1966394T3 (da) * 2005-12-22 2012-10-29 Keygene Nv Forbedrede strategier til transkriptprofilering under anvendelse af high throughput-sekventeringsteknologier
CN101374963B (zh) 2005-12-22 2014-06-04 凯津公司 用于基于aflp的高通量多态性检测的方法
US7932029B1 (en) * 2006-01-04 2011-04-26 Si Lok Methods for nucleic acid mapping and identification of fine-structural-variations in nucleic acids and utilities
ES2545264T3 (es) 2006-04-04 2015-09-09 Keygene N.V. Detección de alto rendimiento de marcadores moleculares basada en fragmentos de restricción
EP2275576B1 (de) * 2006-07-12 2013-09-04 Keygene N.V. Genomische Kartierung mit hohem Durchsatz unter Verwendung von AFLP
EP2121983A2 (de) 2007-02-02 2009-11-25 Illumina Cambridge Limited Verfahren zur kennzeichnung von proben und sequenzierung mehrerer nukleotidmatrizen
CL2008001682A1 (es) 2007-06-08 2008-12-12 Monsanto Technology Llc Metodos para el mejoramiento de plantas mediante el uso de informacion directa de secuencias de acidos nucleicos.
US9080211B2 (en) 2008-10-24 2015-07-14 Epicentre Technologies Corporation Transposon end compositions and methods for modifying nucleic acids
EP2379751B1 (de) 2009-01-13 2013-03-20 Keygene N.V. Neue genomsequenzierungsstrategien
EP2248914A1 (de) * 2009-05-05 2010-11-10 Max-Planck-Gesellschaft zur Förderung der Wissenschaften e.V. Die Verwendung von IIB-Restriktionsendonukleasen in Sequenzierungsanwendungen der zweiten Generation
CN101693918B (zh) * 2009-10-13 2012-01-04 东南大学 一种提高核酸内切酶v切割位置特异性的方法
WO2011071382A1 (en) * 2009-12-10 2011-06-16 Keygene N.V. Polymorfphic whole genome profiling
EP2333104A1 (de) 2009-12-11 2011-06-15 Lexogen GmbH RNA-Analyseverfahren
EP2354243A1 (de) 2010-02-03 2011-08-10 Lexogen GmbH Verfahren zur Komplexitätsminderung
SG186954A1 (en) * 2010-07-09 2013-02-28 Mscls B V 3-d genomic region of interest sequencing strategies
CA2848304A1 (en) 2011-09-09 2013-03-14 The Board Of Trustees Of The Leland Stanford Junior University Methods for sequencing a polynucleotide
US10612018B2 (en) 2011-09-16 2020-04-07 Lexogen Gmbh Nucleic acid transcription method
CN102373288B (zh) * 2011-11-30 2013-12-11 盛司潼 一种对目标区域进行测序的方法及试剂盒
CN103305503B (zh) * 2012-03-16 2016-05-11 江苏基谱生物科技发展有限公司 一种用于高通量测序的索引序列组
WO2014129894A1 (en) * 2013-02-19 2014-08-28 Cergentis B.V. Sequencing strategies for genomic regions of interest
CN104630202A (zh) * 2013-11-13 2015-05-20 北京大学 一种能够减小微量核酸物质整体扩增时产生偏倚的扩增方法
GB201409282D0 (en) * 2014-05-23 2014-07-09 Univ Sydney Tech Sequencing process
EP3208343B1 (de) 2014-10-13 2022-01-05 MGI Tech Co., Ltd. Nukleinsäurefragmentierungsverfahren und sequenzkombination
CN107590362B (zh) * 2017-08-21 2019-12-06 武汉菲沙基因信息有限公司 一种基于长读序测序判断重叠组装正误的方法
CN110157781B (zh) * 2018-12-29 2020-08-21 广州凯普医药科技有限公司 一种重叠延伸PCR结合Sanger测序检测不连续多DNA位点的方法
US20220195624A1 (en) * 2019-01-29 2022-06-23 Mgi Tech Co., Ltd. High coverage stlfr
EP3973073A1 (de) * 2019-05-20 2022-03-30 Arima Genomics, Inc. Verfahren und zusammensetzungen zur verbesserten genomabdeckung und erhaltung von räumlicher proximaler nähe
CN111667883B (zh) * 2020-06-03 2021-01-22 四川大学 一种基于复合微单倍型焦磷酸测序图谱解析的法医学混合dna的分析方法

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KR100321510B1 (ko) * 1991-09-24 2005-01-10 키진 엔.브이. 선택적인 제한단편의 증폭:디엔에이(dna) 핑거프린트법
WO1998030721A1 (en) * 1997-01-10 1998-07-16 Pioneer Hi-Bred International, Inc. Hybridization-based genetic amplification and analysis
ES2163271T3 (es) * 1997-05-13 2002-01-16 Azign Bioscience As Procedimiento para clonar arnm y visualizar transcriptores diferencialmente expresados (dodets).
AU5585599A (en) * 1998-08-31 2000-03-21 University Of Washington Stable isotope metabolic labeling for analysis of biopolymers
AU2144000A (en) * 1998-10-27 2000-05-15 Affymetrix, Inc. Complexity management and analysis of genomic dna
JP2002534098A (ja) * 1999-01-06 2002-10-15 コーネル リサーチ ファンデーション インク． ゲノムシークエンシングにおける単一ヌクレオチドの多型の加速度的な同定およびクローンの整列化
ATE386819T1 (de) * 1999-04-09 2008-03-15 Keygene Nv Verfahren zur analyse von aflp reaktionsmischungen unter verwendung von primer verlängerungstechniken
US7217516B2 (en) * 2000-05-15 2007-05-15 Keygene N.V. Methods and kits comprising AFLP primers, and ramp primers with a part complementary to a compound microsatellite repeat and an anchor part complementary to nucleotides adjacent to the repeat
WO2002086163A1 (en) * 2001-04-20 2002-10-31 Karolinska Innovations Ab Methods for high throughput genome analysis using restriction site tagged microarrays
ATE437945T1 (de) * 2003-01-29 2009-08-15 454 Corp Verfahren zur amplifikation und sequenzierung von nukleinsäuren

Also Published As

Publication number Publication date
CN101278058A (zh) 2008-10-01
US20090142758A1 (en) 2009-06-04
DK1910562T3 (da) 2011-03-21
ES2357549T3 (es) 2011-04-27
CA2613248A1 (en) 2006-12-28
ATE465274T1 (de) 2010-05-15
JP2008546405A (ja) 2008-12-25
EP1910563B1 (de) 2010-04-21
AU2006259990A1 (en) 2006-12-28
AU2006259990B2 (en) 2011-01-27
WO2006137734A1 (en) 2006-12-28
ES2344802T3 (es) 2010-09-07
EP1910563A1 (de) 2008-04-16

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