CN104903465B - 基于寡核苷酸切割及延伸‑依赖性非‑杂交探测的靶核酸序列的检测 - Google Patents

基于寡核苷酸切割及延伸‑依赖性非‑杂交探测的靶核酸序列的检测 Download PDF

Info

Publication number
CN104903465B
CN104903465B CN201380068241.3A CN201380068241A CN104903465B CN 104903465 B CN104903465 B CN 104903465B CN 201380068241 A CN201380068241 A CN 201380068241A CN 104903465 B CN104903465 B CN 104903465B
Authority
CN
China
Prior art keywords
mentioned
oligonucleotide
hybridization
nucleic acid
oligonucleotides
Prior art date
Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
Active
Application number
CN201380068241.3A
Other languages
English (en)
Chinese (zh)
Other versions
CN104903465A (zh
Inventor
千钟润
李荣祚
Current Assignee (The listed assignees may be inaccurate. Google has not performed a legal analysis and makes no representation or warranty as to the accuracy of the list.)
Seegene Inc
Original Assignee
Seegene Inc
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Seegene Inc filed Critical Seegene Inc
Publication of CN104903465A publication Critical patent/CN104903465A/zh
Application granted granted Critical
Publication of CN104903465B publication Critical patent/CN104903465B/zh
Active legal-status Critical Current
Anticipated expiration legal-status Critical

Links

Classifications

    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6813Hybridisation assays
    • C12Q1/6816Hybridisation assays characterised by the detection means
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6813Hybridisation assays
    • C12Q1/6816Hybridisation assays characterised by the detection means
    • C12Q1/6823Release of bound markers
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6813Hybridisation assays
    • C12Q1/6834Enzymatic or biochemical coupling of nucleic acids to a solid phase
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6844Nucleic acid amplification reactions
    • C12Q1/6851Quantitative amplification
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6844Nucleic acid amplification reactions
    • C12Q1/6853Nucleic acid amplification reactions using modified primers or templates

Landscapes

  • Chemical & Material Sciences (AREA)
  • Organic Chemistry (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Zoology (AREA)
  • Wood Science & Technology (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Health & Medical Sciences (AREA)
  • Engineering & Computer Science (AREA)
  • Microbiology (AREA)
  • Biochemistry (AREA)
  • Physics & Mathematics (AREA)
  • Molecular Biology (AREA)
  • Biotechnology (AREA)
  • Biophysics (AREA)
  • Analytical Chemistry (AREA)
  • Immunology (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • General Engineering & Computer Science (AREA)
  • General Health & Medical Sciences (AREA)
  • Genetics & Genomics (AREA)
  • Chemical Kinetics & Catalysis (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
CN201380068241.3A 2012-12-27 2013-12-27 基于寡核苷酸切割及延伸‑依赖性非‑杂交探测的靶核酸序列的检测 Active CN104903465B (zh)

Applications Claiming Priority (7)

Application Number Priority Date Filing Date Title
KR20120154834 2012-12-27
KR10-2012-0154834 2012-12-27
KR20130008580 2013-01-25
KR10-2013-0008580 2013-01-25
KR10-2013-0034670 2013-03-29
KR20130034670 2013-03-29
PCT/KR2013/012312 WO2014104818A1 (en) 2012-12-27 2013-12-27 Detection of target nucleic acid sequence by pto cleavage and extension-dependent non-hybridization assay

Publications (2)

Publication Number Publication Date
CN104903465A CN104903465A (zh) 2015-09-09
CN104903465B true CN104903465B (zh) 2017-04-26

Family

ID=51021756

Family Applications (1)

Application Number Title Priority Date Filing Date
CN201380068241.3A Active CN104903465B (zh) 2012-12-27 2013-12-27 基于寡核苷酸切割及延伸‑依赖性非‑杂交探测的靶核酸序列的检测

Country Status (12)

Country Link
US (2) US9783845B2 (GUID-C5D7CC26-194C-43D0-91A1-9AE8C70A9BFF.html)
EP (1) EP2943586B1 (GUID-C5D7CC26-194C-43D0-91A1-9AE8C70A9BFF.html)
JP (1) JP6178430B2 (GUID-C5D7CC26-194C-43D0-91A1-9AE8C70A9BFF.html)
KR (1) KR101760267B1 (GUID-C5D7CC26-194C-43D0-91A1-9AE8C70A9BFF.html)
CN (1) CN104903465B (GUID-C5D7CC26-194C-43D0-91A1-9AE8C70A9BFF.html)
AU (1) AU2013371128B2 (GUID-C5D7CC26-194C-43D0-91A1-9AE8C70A9BFF.html)
BR (1) BR112015014152B1 (GUID-C5D7CC26-194C-43D0-91A1-9AE8C70A9BFF.html)
CA (1) CA2896213C (GUID-C5D7CC26-194C-43D0-91A1-9AE8C70A9BFF.html)
ES (1) ES2653642T3 (GUID-C5D7CC26-194C-43D0-91A1-9AE8C70A9BFF.html)
MX (1) MX361191B (GUID-C5D7CC26-194C-43D0-91A1-9AE8C70A9BFF.html)
RU (1) RU2620958C2 (GUID-C5D7CC26-194C-43D0-91A1-9AE8C70A9BFF.html)
WO (1) WO2014104818A1 (GUID-C5D7CC26-194C-43D0-91A1-9AE8C70A9BFF.html)

Families Citing this family (21)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
EP3469100B1 (en) 2016-06-10 2021-01-27 Seegene, Inc. Methods for preparing tagging oligonucleotides
KR102301305B1 (ko) 2016-06-30 2021-09-13 주식회사 씨젠 핵산 증폭용 튜브 및 핵산 증폭용 반응 용기
WO2018066950A1 (en) 2016-10-06 2018-04-12 Seegene, Inc. . Methods for preparing oligonucleotides for detecting target nucleic acid molecules in samples
EP3559275A1 (de) * 2016-12-23 2019-10-30 Albert-Ludwigs-Universität Freiburg Zweiteilige mediatorsonde
ES2972231T3 (es) 2016-12-29 2024-06-11 Seegene Inc Procedimiento para reducir la formación de dímeros de cebadores y aumentar la eficacia de la amplificación
WO2018182281A1 (en) 2017-03-28 2018-10-04 Seegene, Inc. . Analytical signal for determination of the presence of a target nucleic acid sequence
CN108823287B (zh) 2017-04-28 2019-04-12 厦门大学 一种检测靶核酸序列的方法
CN107236815A (zh) * 2017-07-18 2017-10-10 江西贤聚景欣医药生物科技有限公司 用于靶核酸序列检测的多重淬灭荧光探针及方法
WO2019045532A2 (en) 2017-08-31 2019-03-07 Seegene, Inc. EVALUATION OF COMPONENT PERFORMANCE USING A PAIR OF DIMER FORMER PRIMERS
WO2019066461A2 (en) 2017-09-29 2019-04-04 Seegene, Inc. DETECTION OF TARGET NUCLEIC ACID SEQUENCES BY CLEAVAGE ANALYSIS AND EXTENSION OF PTO
US12391997B2 (en) 2018-01-05 2025-08-19 Seegene, Inc. Method for determining the presence or absence of M. tuberculosis, M. bovis and M. bovis BCG in a sample
KR102464501B1 (ko) 2018-04-20 2022-11-17 주식회사 씨젠 샘플 내 복수의 타겟 핵산 서열의 검출을 위한 방법 및 장치
WO2020122679A1 (en) 2018-12-14 2020-06-18 Seegene, Inc. Method for detecting a target analyte in a sample using an s-shaped function for a slope data set
US20220298555A1 (en) * 2018-12-20 2022-09-22 Roche Molecular Systems, Inc. Detection of target nucleic acid by solid-phase molography
WO2023043280A1 (ko) 2021-09-17 2023-03-23 주식회사 씨젠 합성 비자연 염기를 포함하는 태그 올리고뉴클레오타이드를 이용한 타겟 핵산 서열의 검출
EP4511509A1 (de) * 2022-04-22 2025-02-26 Hahn-Schickard-Gesellschaft für angewandte Forschung e. V. Nukleinsäurenachweis in einer pcr mittels eines zielsequenz-unspezifischem modularer reporterkomplexes
EP4265734A1 (de) * 2022-04-22 2023-10-25 Hahn-Schickard-Gesellschaft für angewandte Forschung e.V. Nukleinsäurenachweis in einer pcr mittels eines zielsequenz-unspezifischem modularer reporterkomplexes
KR20250086619A (ko) 2022-10-14 2025-06-13 주식회사 씨젠 상이한 tm 값을 가지는 2개의 프로브를 이용하여 샘플 내 타겟 핵산을 검출하는 방법
EP4372100A1 (en) * 2022-11-15 2024-05-22 Stilla Technologies Data analysis method for multiplex digital pcr using color-combination
WO2024106890A1 (ko) 2022-11-16 2024-05-23 주식회사 씨젠 퀀칭-pto 절단 및 연장(quenching-pto cleavage and extension; q-ptoce) 어세이에 의한 타겟 핵산의 검출
WO2025005717A1 (ko) * 2023-06-30 2025-01-02 주식회사 씨젠 Hto 절단 및 자기-연장 어세이에 의해 샘플 내의 타겟 핵산을 검출하는 방법

Citations (6)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
CN101076537A (zh) * 2003-11-19 2007-11-21 阿莱洛吉克生物科学公司 标记有多个荧光团的寡核苷酸
US20090023151A1 (en) * 2006-08-30 2009-01-22 Dawson Elliott P Method For The Labeling And Detection Of Small Polynucleotides
CN101506384A (zh) * 2006-07-17 2009-08-12 布兰迪斯大学 专一性寡核苷酸和其在核酸扩增与检测中的用途
US20100129812A1 (en) * 2001-01-27 2010-05-27 Jae Chern Yoo Nucleic acid hybridization essay method
WO2012096523A2 (en) * 2011-01-11 2012-07-19 Seegene, Inc. Detection of target nucleic acid sequences by pto cleavage and extension assay
WO2012134195A2 (en) * 2011-03-29 2012-10-04 Seegene, Inc. Detection of target nucleic acid sequence by pto cleavage and extension-dependent cleavage

Family Cites Families (12)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US5210015A (en) 1990-08-06 1993-05-11 Hoffman-La Roche Inc. Homogeneous assay system using the nuclease activity of a nucleic acid polymerase
US5994069A (en) 1996-01-24 1999-11-30 Third Wave Technologies, Inc. Detection of nucleic acids by multiple sequential invasive cleavages
US5541311A (en) 1992-12-07 1996-07-30 Third Wave Technologies, Inc. Nucleic acid encoding synthesis-deficient thermostable DNA polymerase
US5538848A (en) 1994-11-16 1996-07-23 Applied Biosystems Division, Perkin-Elmer Corp. Method for detecting nucleic acid amplification using self-quenching fluorescence probe
GB9812768D0 (en) 1998-06-13 1998-08-12 Zeneca Ltd Methods
US7381532B2 (en) 1999-10-29 2008-06-03 Stratagene California Compositions and methods for the detection of a nucleic acid using a cleavage reaction
US6893819B1 (en) 2000-11-21 2005-05-17 Stratagene California Methods for detection of a nucleic acid by sequential amplification
US7601497B2 (en) * 2000-06-15 2009-10-13 Qiagen Gaithersburg, Inc. Detection of nucleic acids by target-specific hybrid capture method
US7309573B2 (en) 2000-11-21 2007-12-18 Stratagene California Methods for detection of a nucleic acid by sequential amplification
GB0205455D0 (en) * 2002-03-07 2002-04-24 Molecular Sensing Plc Nucleic acid probes, their synthesis and use
WO2008083261A1 (en) 2006-12-29 2008-07-10 Applera Corporation Systems and methods for detecting nucleic acids
WO2012150749A1 (en) * 2011-05-04 2012-11-08 Seegene, Inc. Detection of target nucleic acid sequences by po cleavage and hybridization

Patent Citations (6)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US20100129812A1 (en) * 2001-01-27 2010-05-27 Jae Chern Yoo Nucleic acid hybridization essay method
CN101076537A (zh) * 2003-11-19 2007-11-21 阿莱洛吉克生物科学公司 标记有多个荧光团的寡核苷酸
CN101506384A (zh) * 2006-07-17 2009-08-12 布兰迪斯大学 专一性寡核苷酸和其在核酸扩增与检测中的用途
US20090023151A1 (en) * 2006-08-30 2009-01-22 Dawson Elliott P Method For The Labeling And Detection Of Small Polynucleotides
WO2012096523A2 (en) * 2011-01-11 2012-07-19 Seegene, Inc. Detection of target nucleic acid sequences by pto cleavage and extension assay
WO2012134195A2 (en) * 2011-03-29 2012-10-04 Seegene, Inc. Detection of target nucleic acid sequence by pto cleavage and extension-dependent cleavage

Also Published As

Publication number Publication date
JP6178430B2 (ja) 2017-08-09
CA2896213A1 (en) 2014-07-03
AU2013371128B2 (en) 2017-08-10
KR101760267B1 (ko) 2017-07-24
KR20150093766A (ko) 2015-08-18
ES2653642T3 (es) 2018-02-08
EP2943586B1 (en) 2017-09-20
EP2943586A1 (en) 2015-11-18
WO2014104818A1 (en) 2014-07-03
AU2013371128A1 (en) 2015-08-13
CN104903465A (zh) 2015-09-09
US9783845B2 (en) 2017-10-10
US20180057869A1 (en) 2018-03-01
US20160060690A1 (en) 2016-03-03
EP2943586A4 (en) 2016-09-28
MX361191B (es) 2018-11-29
RU2015130335A (ru) 2017-01-30
CA2896213C (en) 2018-12-11
MX2015008494A (es) 2015-09-10
RU2620958C2 (ru) 2017-05-30
BR112015014152B1 (pt) 2023-01-24
BR112015014152A2 (GUID-C5D7CC26-194C-43D0-91A1-9AE8C70A9BFF.html) 2017-08-22
JP2016502861A (ja) 2016-02-01

Similar Documents

Publication Publication Date Title
CN104903465B (zh) 基于寡核苷酸切割及延伸‑依赖性非‑杂交探测的靶核酸序列的检测
JP6244440B2 (ja) Pto切断及び伸長アッセイによるターゲット核酸配列の検出
KR101569479B1 (ko) Pto 절단 및 연장-의존적 절단에 의한 타겟 핵산서열의 검출
CN104145029B (zh) 利用探测和标记寡核苷酸切割及延伸-依赖性信号传导寡核苷酸杂交的靶核酸序列的检测
JP6529934B2 (ja) Po切断及びハイブリダイゼーションによるターゲット核酸配列の検出
JP6096885B2 (ja) PTO切断及び伸長依存的なシグナリングオリゴヌクレオチド切断を用いたターゲット核酸配列の検出{DetectionofTargetNucleicAcidSequencebyPTOCleavageandExtension−DependentSignalingOligonucleotideCleavage}
CN105358710B (zh) 靶核酸序列上的核苷酸变异的检测
CN105705657B (zh) 基于利用杂交-捕捉和模板化寡核苷酸的探测和标记寡核苷酸切割及延伸分析的在固相中的靶核酸序列检测
AU2015203677B2 (en) Detection of Target Nucleic Acid Sequences by PTO Cleavage and Extension
KR20170142128A (ko) Cto 세트를 사용한 pto 절단 및 연장 어세이에 의한 타겟 핵산서열의 검출
KR20240058112A (ko) 합성 비자연 염기를 포함하는 태그 올리고뉴클레오타이드를 이용한 타겟 핵산 서열의 검출
RU2588457C2 (ru) Определение целевых нуклеиновокислотных последовательностей путем расщепления зондирующего олигонуклеотида и гибридизации

Legal Events

Date Code Title Description
PB01 Publication
C10 Entry into substantive examination
SE01 Entry into force of request for substantive examination
GR01 Patent grant
GR01 Patent grant