CN104540965B - 靶标检测和信号放大 - Google Patents

靶标检测和信号放大 Download PDF

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Publication number
CN104540965B
CN104540965B CN201380042575.3A CN201380042575A CN104540965B CN 104540965 B CN104540965 B CN 104540965B CN 201380042575 A CN201380042575 A CN 201380042575A CN 104540965 B CN104540965 B CN 104540965B
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substrate
catalytic
segment
nuclease
oligonucleotide
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CN201380042575.3A
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Chinese (zh)
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CN104540965A (zh
Inventor
西蒙·马克·伯恩
艾莉森·威尔彦·托德
蒂莫西·丹尼尔·米罕
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SpeeDx Pty Ltd
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SpeeDx Pty Ltd
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    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6813Hybridisation assays
    • C12Q1/6816Hybridisation assays characterised by the detection means
    • C12Q1/682Signal amplification
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6813Hybridisation assays
    • C12Q1/6816Hybridisation assays characterised by the detection means
    • C12Q1/6823Release of bound markers
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12NMICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N9/00Enzymes; Proenzymes; Compositions thereof; Processes for preparing, activating, inhibiting, separating or purifying enzymes
    • C12N9/14Hydrolases (3)
    • C12N9/16Hydrolases (3) acting on ester bonds (3.1)
    • C12N9/22Ribonucleases [RNase]; Deoxyribonucleases [DNase]
    • GPHYSICS
    • G01MEASURING; TESTING
    • G01NINVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N2333/00Assays involving biological materials from specific organisms or of a specific nature
    • G01N2333/90Enzymes; Proenzymes
    • G01N2333/9005Enzymes with nucleic acid structure; e.g. ribozymes

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  • Chemical & Material Sciences (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Health & Medical Sciences (AREA)
  • Organic Chemistry (AREA)
  • Wood Science & Technology (AREA)
  • Zoology (AREA)
  • Engineering & Computer Science (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Molecular Biology (AREA)
  • Genetics & Genomics (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Biotechnology (AREA)
  • Biochemistry (AREA)
  • General Engineering & Computer Science (AREA)
  • General Health & Medical Sciences (AREA)
  • Microbiology (AREA)
  • Physics & Mathematics (AREA)
  • Analytical Chemistry (AREA)
  • Biophysics (AREA)
  • Immunology (AREA)
  • Medicinal Chemistry (AREA)
  • Biomedical Technology (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
  • Enzymes And Modification Thereof (AREA)
CN201380042575.3A 2012-06-18 2013-06-18 靶标检测和信号放大 Expired - Fee Related CN104540965B (zh)

Applications Claiming Priority (7)

Application Number Priority Date Filing Date Title
AU2012902551 2012-06-18
AU2012902551A AU2012902551A0 (en) 2012-06-18 Target detection and signal amplification
AU2012903462 2012-08-10
AU2012903462A AU2012903462A0 (en) 2012-08-10 Target detection and signal amplification
AU2013202354A AU2013202354A1 (en) 2012-06-18 2013-04-03 Target detection and signal amplification
AU2013202354 2013-04-03
PCT/AU2013/000651 WO2013188912A1 (en) 2012-06-18 2013-06-18 Target detection and signal amplification

Publications (2)

Publication Number Publication Date
CN104540965A CN104540965A (zh) 2015-04-22
CN104540965B true CN104540965B (zh) 2019-06-04

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CN201380042575.3A Expired - Fee Related CN104540965B (zh) 2012-06-18 2013-06-18 靶标检测和信号放大

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US (1) US9725757B2 (OSRAM)
EP (1) EP2861770B1 (OSRAM)
JP (1) JP6336443B2 (OSRAM)
CN (1) CN104540965B (OSRAM)
AU (2) AU2013202354A1 (OSRAM)
CA (1) CA2876919C (OSRAM)
IL (1) IL236363A0 (OSRAM)
IN (1) IN2015DN00194A (OSRAM)
NZ (1) NZ629701A (OSRAM)
SG (1) SG11201408489PA (OSRAM)
WO (1) WO2013188912A1 (OSRAM)

Families Citing this family (42)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
JP3170362B2 (ja) 1992-09-30 2001-05-28 株式会社リコー 流体の流量測定装置
DK2633071T3 (en) 2010-10-27 2017-01-30 Harvard College COMPOSITIONS OF "MAINTENANCE" PRIMER DUPLEXES AND METHODS OF USE
KR102044564B1 (ko) * 2011-09-09 2019-11-13 스피디엑스 피티와이 리미티드 핵산 효소 기질
US9476090B2 (en) * 2013-05-21 2016-10-25 Stc.Unm Signal propagation biomolecules, devices and methods
CN110004208A (zh) 2014-03-11 2019-07-12 哈佛学院院长及董事 利用可编程核酸探针的高通量且高度多路复用的成像
GB201415674D0 (en) * 2014-09-04 2014-10-22 Moorlodge Biotech Ventures Ltd Nucleic acid analysis
ES2891085T3 (es) 2015-01-30 2022-01-26 Harvard College Obtención de imágenes sin microscopio
CN108779486B (zh) * 2016-02-17 2023-02-28 哈佛学院院长及董事 分子编程工具
US11359229B2 (en) 2016-09-20 2022-06-14 President And Fellows Of Harvard College Molecular verification systems
US10934162B2 (en) * 2016-11-15 2021-03-02 The Governors Of The University Of Alberta MicroRNA initiated DNAzyme motor operating in living cells
JP7116062B2 (ja) 2017-01-10 2022-08-09 プレジデント アンド フェローズ オブ ハーバード カレッジ 多重化シグナル増幅
IL267571B2 (en) * 2017-04-11 2025-05-01 Speedx Pty Ltd Detection cascades
CA3058202A1 (en) * 2017-04-17 2018-10-25 Montana State University Switch-like isothermal dna amplification demonstrating a non-linear amplification rate
CN107870242B (zh) * 2017-10-12 2020-02-21 广东省生态环境技术研究所 一种基于核酸适体的荧光检测试剂盒
CN107663530B (zh) * 2017-11-10 2020-07-03 中国海洋大学 一种单链核酸检测试剂盒、方法及其应用
CN111630179B (zh) 2018-01-26 2024-07-19 哈佛学院院长及董事 邻近检测方法和组合物
CN112189055B (zh) 2018-03-22 2024-07-19 哈佛学院院长及董事 用于分子认证的方法和组合物
CN108642137B (zh) * 2018-05-21 2021-11-30 福州大学 一种利用回文锁式探针检测肿瘤生物标志物的方法
CN109055609B (zh) * 2018-08-08 2021-10-15 临沂大学 基于t4 dna聚合酶的西瓜花叶病毒检测传感器及其组装方法
CN109097468A (zh) * 2018-08-14 2018-12-28 南通市第人民医院 Opcml基因启动子甲基化水平的检测试剂盒及其应用
CN109283147B (zh) * 2018-09-20 2021-03-16 湖北师范大学 一种检测卡那霉素的均相生物传感方法及其应用
WO2020177059A1 (en) * 2019-03-04 2020-09-10 Nano And Advanced Materials Institute Limited System and method for detecting heavy metals and bacteria in an analyte
CN110607351B (zh) * 2019-09-20 2022-11-01 济南大学 一种检测尿嘧啶糖基化酶的化学发光生物传感器及其制备方法与应用
WO2021138312A1 (en) * 2019-12-30 2021-07-08 Ultivue, Inc. Methods for reducing nonspecific interactions on biological samples
CN112029827A (zh) * 2020-09-04 2020-12-04 重庆工商大学 一种高效率转换率dna纳米探针结构的设计方法
WO2022061166A1 (en) * 2020-09-17 2022-03-24 Mammoth Biosciences, Inc. Compositions and methods for detection of a nucleic acid
JP2023545038A (ja) * 2020-10-06 2023-10-26 プレジデント・アンド・フェロウズ・オブ・ハーバード・カレッジ 中和標的のシグナルオン検出のための方法、組成物、キット、およびシステム
CN113234800B (zh) * 2021-05-13 2023-01-10 中山大学 一种黄曲霉毒素m1的检测方法及其应用
WO2022271873A2 (en) * 2021-06-22 2022-12-29 Mammoth Biosciences, Inc. Programmable nuclease diagnostic device
US20230167487A2 (en) 2021-07-12 2023-06-01 Labsimply, Inc. Crispr cascade assay
US20230279375A1 (en) * 2021-12-13 2023-09-07 Labsimply, Inc. Signal boost cascade assay
US11820983B2 (en) 2021-12-13 2023-11-21 Labsimply, Inc. Tuning cascade assay kinetics via molecular design
CN114354912A (zh) * 2021-12-29 2022-04-15 东南大学 量子点胶束球形核酸传感器及其制备方法和在Pb2+检测中的应用
WO2023225651A2 (en) * 2022-05-19 2023-11-23 Logicink Corporation Pre-amplification-free target sequence detection with colormetric readout
US12091689B2 (en) 2022-09-30 2024-09-17 Vedabio, Inc. Delivery of therapeutics in vivo via a CRISPR-based cascade system
US11982677B2 (en) 2022-10-02 2024-05-14 Vedabio, Inc. Dimerization screening assays
WO2024081156A1 (en) 2022-10-14 2024-04-18 Vedabio, Inc. Detection of nucleic acid and non-nucleic acid target molecules
WO2024253707A2 (en) 2023-01-07 2024-12-12 Vedabio, Inc. Engineered nucleic acid-guided nucleases
US12060602B2 (en) 2023-01-10 2024-08-13 Vedabio, Inc. Sample splitting for multiplexed detection of nucleic acids without amplification
CN116286806B (zh) * 2023-03-21 2024-11-29 华中科技大学 具有催化功能的寡核苷酸、核酸电子器件、逻辑门复合物及电路
WO2025015097A1 (en) * 2023-07-10 2025-01-16 Arizona Board Of Regents On Behalf Of Arizona State University Dna-based proteolysis targeting chimera (sdtac) and methods of their use for treating diseases
CN116732211B (zh) * 2023-08-09 2023-10-27 湖南工程学院 基于8-17脱氧核酶与CRISPR-Cas13a反式切割检测牛结核分枝杆菌的探针组及方法

Citations (1)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
CN101802216A (zh) * 2007-04-05 2010-08-11 强生研究有限公司 核酸酶和复合体及其使用方法

Family Cites Families (20)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US5424413A (en) * 1992-01-22 1995-06-13 Gen-Probe Incorporated Branched nucleic acid probes
CA2321948A1 (en) * 1998-03-05 1999-09-10 Johnson & Johnson Research Pty. Limited Zymogenic nucleic acid detection methods, and related molecules and kits
WO2001096541A2 (en) * 2000-06-15 2001-12-20 Board Of Regents Allosterically regulated ribozymes
US6664065B2 (en) 2000-06-21 2003-12-16 Robert B. Harris Measuring viral reverse transcriptase activity
US20040106109A1 (en) * 2001-10-02 2004-06-03 Belly Robert T Detection of ras mutations
CA2632216C (en) * 2004-07-06 2013-11-12 Societe De Commercialisation Des Produits De La Recherche Appliquee Socpra Sciences Sante Et Humaines S.E.C. A target-dependent nucleic acid adapter
US20060240462A1 (en) * 2005-04-21 2006-10-26 Johnson & Johnson Research Pty Limited Methods for amplification and detection of nucleic acids
US20120101267A1 (en) * 2005-10-07 2012-04-26 Alison Velyian Todd Multicomponent nucleic acid enzymes with cleavage, ligase or other activity and methods for their use
BRPI0616466B1 (pt) * 2005-10-07 2021-01-26 Johnson & Johnson Research Pty Limited composição de enzimas de ácido nucleico multicomponentes (mnazima), métodos para detectar a presença de pelo menos um facilitador de combinação, um alvo e uma variante de sequência de ácidos nucléicos, métodos para fabricar uma pluraridade de mnazima, testar sequências de núcleo catalítico parcial e identificar suas posições, bem como uso de pelo menos um oligonucleotídeo
AU2006323930B2 (en) * 2005-12-07 2012-06-21 Janssen Sciences Ireland Uc Methods, plasmid vectors and primers for assessing HIV viral fitness
KR20090098960A (ko) * 2006-10-06 2009-09-18 존슨 앤드 존슨 리서치 피티와이 리미티드 분자 스위치 및 이의 이용 방법
CA2682337C (en) * 2007-04-06 2017-01-17 Virco Bvba Respiratory syncytial virus (rsv) viral load detection assay
CN101821411A (zh) * 2007-08-13 2010-09-01 斯特拉斯克莱德大学 核酸序列的鉴定
US20110207132A1 (en) * 2008-08-04 2011-08-25 University Of Maryland Probes and methods for detecting analytes
CN102186997B (zh) * 2008-08-15 2014-12-24 卡斯凯德生物体系股份有限公司 检测核酸
WO2012065231A1 (en) * 2010-11-19 2012-05-24 Speedx Pty Ltd Signal amplification
KR101249493B1 (ko) 2010-11-23 2013-04-01 한국과학기술원 핵산효소-분자비콘을 이용한 핵산의 검출방법
KR102044564B1 (ko) * 2011-09-09 2019-11-13 스피디엑스 피티와이 리미티드 핵산 효소 기질
NZ628883A (en) * 2012-02-20 2015-07-31 Speedx Pty Ltd Detection of nucleic acids
US9476090B2 (en) * 2013-05-21 2016-10-25 Stc.Unm Signal propagation biomolecules, devices and methods

Patent Citations (1)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
CN101802216A (zh) * 2007-04-05 2010-08-11 强生研究有限公司 核酸酶和复合体及其使用方法

Non-Patent Citations (2)

* Cited by examiner, † Cited by third party
Title
an aptazyme-based electrochemical biosensor for the detection of adnosine;Chenhu Sun等;《analytica chimica acta》;20100514;摘要、3.1、表1、scheme1 *
DNAzyme molecular beacon probes for target-induced signal-amplifying colorimetric detection of nucleic acids;Rongzhan Fu等;《Anal. Chem.》;20110115;摘要、第494页右栏第2段-第495页左栏第2段、Scheme 1 *

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Publication number Publication date
US20160083785A1 (en) 2016-03-24
AU2013277929A1 (en) 2015-01-22
EP2861770B1 (en) 2018-01-31
JP6336443B2 (ja) 2018-06-06
SG11201408489PA (en) 2015-01-29
CN104540965A (zh) 2015-04-22
JP2015523864A (ja) 2015-08-20
WO2013188912A1 (en) 2013-12-27
IL236363A0 (en) 2015-02-26
AU2013202354A1 (en) 2014-01-16
EP2861770A1 (en) 2015-04-22
CA2876919A1 (en) 2013-12-27
CA2876919C (en) 2021-09-14
HK1205202A1 (en) 2015-12-11
NZ629701A (en) 2016-03-31
AU2013277929B2 (en) 2015-07-16
US9725757B2 (en) 2017-08-08
EP2861770A4 (en) 2015-12-23
IN2015DN00194A (OSRAM) 2015-06-12

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