ATE525482T1 - Nanoreporter und verfahren zu deren herstellung und verwendung - Google Patents

Nanoreporter und verfahren zu deren herstellung und verwendung

Info

Publication number
ATE525482T1
ATE525482T1 AT06848157T AT06848157T ATE525482T1 AT E525482 T1 ATE525482 T1 AT E525482T1 AT 06848157 T AT06848157 T AT 06848157T AT 06848157 T AT06848157 T AT 06848157T AT E525482 T1 ATE525482 T1 AT E525482T1
Authority
AT
Austria
Prior art keywords
probes
methods
target molecules
relates
nanoreporters
Prior art date
Application number
AT06848157T
Other languages
English (en)
Inventor
Gary Geiss
Sean Ferree
Philippa Webster
Krassen Dimitrov
Original Assignee
Nanostring Technologies Inc
Inst Systems Biology
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Nanostring Technologies Inc, Inst Systems Biology filed Critical Nanostring Technologies Inc
Application granted granted Critical
Publication of ATE525482T1 publication Critical patent/ATE525482T1/de

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    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6813Hybridisation assays
    • C12Q1/6816Hybridisation assays characterised by the detection means
    • C12Q1/682Signal amplification
    • BPERFORMING OPERATIONS; TRANSPORTING
    • B82NANOTECHNOLOGY
    • B82YSPECIFIC USES OR APPLICATIONS OF NANOSTRUCTURES; MEASUREMENT OR ANALYSIS OF NANOSTRUCTURES; MANUFACTURE OR TREATMENT OF NANOSTRUCTURES
    • B82Y5/00Nanobiotechnology or nanomedicine, e.g. protein engineering or drug delivery
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6813Hybridisation assays
    • C12Q1/6816Hybridisation assays characterised by the detection means
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6876Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes

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  • Chemical & Material Sciences (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Engineering & Computer Science (AREA)
  • Organic Chemistry (AREA)
  • Health & Medical Sciences (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Zoology (AREA)
  • Wood Science & Technology (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Biotechnology (AREA)
  • General Health & Medical Sciences (AREA)
  • General Engineering & Computer Science (AREA)
  • Molecular Biology (AREA)
  • Biophysics (AREA)
  • Analytical Chemistry (AREA)
  • Biochemistry (AREA)
  • Physics & Mathematics (AREA)
  • Microbiology (AREA)
  • Immunology (AREA)
  • Genetics & Genomics (AREA)
  • Nanotechnology (AREA)
  • Medicinal Chemistry (AREA)
  • Pharmacology & Pharmacy (AREA)
  • Crystallography & Structural Chemistry (AREA)
  • Medical Informatics (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
  • Apparatus Associated With Microorganisms And Enzymes (AREA)
  • Oxygen, Ozone, And Oxides In General (AREA)
  • Inorganic Fibers (AREA)
  • Compounds Of Alkaline-Earth Elements, Aluminum Or Rare-Earth Metals (AREA)
AT06848157T 2005-12-23 2006-12-22 Nanoreporter und verfahren zu deren herstellung und verwendung ATE525482T1 (de)

Applications Claiming Priority (3)

Application Number Priority Date Filing Date Title
US75375805P 2005-12-23 2005-12-23
US84352806P 2006-09-08 2006-09-08
PCT/US2006/049274 WO2007076128A2 (en) 2005-12-23 2006-12-22 Nanoreporters and methods of manufacturing and use thereof

Publications (1)

Publication Number Publication Date
ATE525482T1 true ATE525482T1 (de) 2011-10-15

Family

ID=38218716

Family Applications (1)

Application Number Title Priority Date Filing Date
AT06848157T ATE525482T1 (de) 2005-12-23 2006-12-22 Nanoreporter und verfahren zu deren herstellung und verwendung

Country Status (8)

Country Link
US (4) US20100015607A1 (de)
EP (1) EP1963531B1 (de)
JP (1) JP5537034B2 (de)
AT (1) ATE525482T1 (de)
AU (1) AU2006330830B2 (de)
CA (1) CA2640385C (de)
ES (1) ES2374788T3 (de)
WO (2) WO2007076128A2 (de)

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WO2007076129A2 (en) 2007-07-05
US20130230851A1 (en) 2013-09-05
JP2009521230A (ja) 2009-06-04
US20180135099A1 (en) 2018-05-17
JP5537034B2 (ja) 2014-07-02
US20160265025A1 (en) 2016-09-15
US9371563B2 (en) 2016-06-21
AU2006330830A1 (en) 2007-07-05
AU2006330830B2 (en) 2013-01-10
US9890419B2 (en) 2018-02-13
WO2007076128A2 (en) 2007-07-05
EP1963531A2 (de) 2008-09-03
US20100015607A1 (en) 2010-01-21
EP1963531A4 (de) 2009-10-21
EP1963531B1 (de) 2011-09-21
WO2007076128A3 (en) 2007-11-29
WO2007076129A3 (en) 2008-03-06

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