WO1998029552A1 - Nouveau gene de serine-threonine kinase - Google Patents
Nouveau gene de serine-threonine kinase Download PDFInfo
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- WO1998029552A1 WO1998029552A1 PCT/JP1997/004855 JP9704855W WO9829552A1 WO 1998029552 A1 WO1998029552 A1 WO 1998029552A1 JP 9704855 W JP9704855 W JP 9704855W WO 9829552 A1 WO9829552 A1 WO 9829552A1
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- C12N9/00—Enzymes; Proenzymes; Compositions thereof; Processes for preparing, activating, inhibiting, separating or purifying enzymes
- C12N9/10—Transferases (2.)
- C12N9/12—Transferases (2.) transferring phosphorus containing groups, e.g. kinases (2.7)
- C12N9/1205—Phosphotransferases with an alcohol group as acceptor (2.7.1), e.g. protein kinases
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- C12Y207/00—Transferases transferring phosphorus-containing groups (2.7)
- C12Y207/01—Phosphotransferases with an alcohol group as acceptor (2.7.1)
- C12Y207/01037—Protein kinase (2.7.1.37)
Definitions
- the present invention relates to a novel serine / threonine kinase gene.
- Fetal tissue contains many undifferentiated cells that are actively growing, highly activated cells, and neovascular endothelial cells.
- the activity of these cells in fetal tissue is under strict control, and the fetal tissue is in a state of solid tumors, except that it is subject to force control that is suppressed as the individual matures. It can be said that they are in a similar state. Therefore, some genes specifically or more strongly expressed in fetal tissues (fetal genes) are characteristic of solid tumors such as abnormally proliferative, immortalized, invasive, metastatic and angiogenic. There is a possibility that the gene is involved in the phenomenon. It is also presumed that some diseases other than tumors are caused by abnormal activation of fetal genes, which are suppressed in normal organisms. Therefore, by isolating fetal genes and analyzing them, it would be possible to search for genes involved in various diseases, including tumors.
- An object of the present invention is to isolate a gene specifically expressed in fetal tissue and search for a disease-related gene.
- the present inventors believe that the state of cells in fetal tissues can be a model of the state of cells in solid tumors, and can isolate and analyze fetal genes to search for genes involved in diseases such as tumors. I thought. Furthermore, it is thought that by designing drugs targeting the gene, it is possible to develop drugs with a new mechanism of action. Was. Thus, the present inventors have attempted to isolate a fetal gene based on such a concept. Specifically, the present inventors have prepared a subtraction library containing a large number of genes expressed specifically in fetal liver (or stronger than in adult liver) by the subtraction subtractive hybridization method. The clones were extracted at random and their structure was analyzed.
- the present inventors succeeded in isolating a novel gene (VRK1) containing a consensus sequence for the active site of serine / threonine kinase. Further, the present inventors conducted a database search based on the amino acid sequence deduced from the isolated gene. As a result, they found that this gene product showed significant homology to B1R kinase, which is thought to be involved in vaccinia virus DNA replication. Further, the present inventors have found a human EST having extremely high homology to this gene on a database, and isolated the full-length cDNA (VRK2).
- the present invention relates to novel human serine / threonine kinase genes “VM1” and “VRK2”, more specifically,
- a protein comprising the amino acid sequence of SEQ ID NO: 2, or a protein having a sequence in which one or several amino acids are added, deleted or substituted, and having a serine / sleonin kinase activity;
- a protein comprising the amino acid sequence of SEQ ID NO: 4, or a protein having a sequence in which one or several amino acids have been added, deleted or substituted, and having serine / sleonin kinase activity;
- step (b) comparing the kinase activity detected in the step (a) with the kinase activity detected in the absence of the test compound, and obtaining the protein kinase according to any one of (1) to (4). Selecting a compound that reduces activity.
- the present invention relates to novel serine / threonine kinases “VRK1” and “VRK2”.
- the nucleotide sequence of the cDNA of “VRK1” is shown in SEQ ID NO: 1, and the amino acid sequence of the protein is shown in SEQ ID NO: 2.
- the nucleotide sequence of the cDNA of "VRK2” is shown in SEQ ID NO: 3, and the amino acid sequence of the protein is shown in SEQ ID NO: 4.
- “VRK1” cDNA has significant homology to B1R kinase, which is suggested to be involved in NA replication of vaccinia virus, and its gene is propagated in fetal liver, testis, various cancer cell lines, etc.
- VRK1 is particularly involved in the control mechanism of cell proliferation. Since the “VRK1” protein has protein kinase activity, this activity is thought to play an important role in controlling cell proliferation.
- VRK2 has high homology with “VM1”, and particularly shows high homology in the serine / threonine kinase region.
- VRK2 Has significant homology to B1R kinase, similar to “VRK1,” and its gene is characterized by strong expression in highly proliferative cells such as fetal liver, testis, and various cancer cell lines. From these facts, it is considered that “VRK2” has the same function as “VRK1”.
- VRK1 and “VRK2” proteins can be prepared as recombinant proteins using genetic recombination techniques or as natural proteins.
- Recombinant proteins can be prepared, for example, by culturing cells transformed with DNAs encoding these proteins, as described below.
- natural proteins can be obtained by methods known to those skilled in the art, for example, by performing affinity chromatography using the antibody of the present invention described later, such as fetal liver, testis, and HeLa S3, which have high expression of these proteins. It can be isolated from cell lines.
- the antibody may be a polyclonal antibody or a monoclonal antibody.
- these proteins are immunized to small animals such as egrets to obtain serum, which is then subjected to, for example, ammonium sulfate precipitation, protein A, protein G columns, DEAE ion exchange chromatography, and these proteins.
- serum is then subjected to, for example, ammonium sulfate precipitation, protein A, protein G columns, DEAE ion exchange chromatography, and these proteins.
- Ammonium sulfate precipitation protein A
- protein G columns protein G columns
- DEAE ion exchange chromatography DEAE ion exchange chromatography
- spleen is excised from the mice, crushed into cells, and fused with mouse smear cells and reagents such as polyethylene glycol. Then, clones that produce antibodies against these proteins are selected from the resulting fused cells (hybridomas).
- hybridoma is transplanted into the peritoneal cavity of a mouse, ascites is recovered from the mouse, and the obtained monoclonal antibody is subjected to, for example, ammonium sulfate precipitation, protein A, protein G column, DEAE ion exchange chromatography, and the like.
- "VRK1" protein or “VRK2” protein can be prepared by purification using an affinity column coupled thereto.
- an affinity column coupled thereto When the obtained antibody is used for the purpose of administration to the human body (antibody therapy or the like), it is effective to use a humanized antibody or a human antibody to reduce immunogenicity.
- Methods for humanizing antibodies include CDR grafting, which involves cloning antibody genes from monoclonal antibody-producing cells and transplanting the antigen-determined site into existing human antibodies. Is mentioned.
- a human antibody can be produced directly by immunizing a mouse in which the immune system has been replaced with a human one, similarly to a normal monoclonal antibody.
- Examples of methods for modifying amino acids known to those skilled in the art include, for example, a site-directed mutagenesis system using PCR (GIBC0-BRL, Gaitherrsburg, Mary 1 and), a site-directed mutagenesis method using oligonucleotides (Kramer , W. and Fritz, HJ (1987) Methods in Enzymol., 154: 350-367), the Kunkel method (Methods Enzymo 1.85, 2763-2766 (1988)), and the like.
- the substitution of amino acids is usually within 10 amino acids, preferably within 6 amino acids, and more preferably within 3 amino acids.
- serine / threonine kinase activity is maintained.
- Amino acid additions, deletions or substitutions may be in regions other than the region corresponding to the consensus sequence of the serine / threonine kinase active site and the region corresponding to the consensus sequence of the protein kinase ATP binding site. Is preferred in terms of activity.
- the serine / threonine kinase activity of the protein can be detected, for example, by the method described in Example 9 below. Further, those skilled in the art can use the hybridization technology (Sajnbrook, J et al., Molecular Cloning 2nd ed.
- Proteins having zealase activity are also included in the protein of the present invention.
- a DNA encoding a protein having substantially the same function as the “VM1” or “VRK2” protein isolated by this method is usually a DNA encoding a “VRK1” protein or a “VRK2” protein ( It has high homology to SEQ ID NO: 1 or 3). High homology refers to sequence identity of at least 40% or more, preferably 60% or more, more preferably 80% or more at the amino acid level.
- Examples of conditions for hybridization for isolating such DNA are as follows. That is, after performing prehybridization at 55 ° C for 30 minutes or more using ExpressHyb Hybridization Solution j (manufactured by CLONTECH), a labeled probe was added, and the mixture was incubated at 37 ° C to 55 ° C. Incubate for more than 3 hours by incubating for 2 hours at room temperature in 2xSSC, 0.13 ⁇ 4 SDS, then 20 minutes at 37 ° C in lxSSC, 0.1% SDS.
- Washing is performed once More preferably, pre-hybridization is performed using ExpressHyb Hybridization Solution j (manufactured by CLONTECH) at 60 ° C for 30 minutes or more, and a labeled probe is added. Hybridization is carried out by keeping the temperature for at least 1 hour at 60 ° C, followed by three washes in 2xSS in 0.1% SDS for 20 minutes at room temperature, followed by lxSSC in 0.1% SDS. Wash twice for 20 minutes at ° C.
- ExpressHyb Hybridization Solution j manufactured by CLONTECH
- Hybridization is carried out by keeping the temperature for at least 1 hour at 60 ° C, followed by three washes in 2xSS in 0.1% SDS for 20 minutes at room temperature, followed by lxSSC in 0.1% SDS. Wash twice for 20 minutes at ° C.
- More preferable conditions are “ExpressHyb Hybr After performing prehybridization at 68 ° C for 30 minutes or more using idization Solutionj (manufactured by CLONTECH), add a labeled probe, and incubate at 68 ° C for 1 hour or more. Then, wash twice in 2xSSC, 0.13 ⁇ 4 SDS at room temperature for 20 minutes, and then wash twice in 0.1xSSC, 0.1% SDS at 50 ° C for 20 minutes. .
- the present invention also relates to a DNA encoding the protein of the present invention.
- the DNA of the present invention includes not only cDNA but also genomic DNA and synthetic MA as long as it can encode the protein of the present invention.
- the DNA of the present invention can be used for producing a recombinant protein. That is, a transformant obtained by inserting the DNA of the present invention (for example, the DNA of SEQ ID NO: 1 or 3) into an appropriate expression vector and introducing the vector into an appropriate cell is cultured. It is possible to prepare a recombinant protein by purifying the expressed protein.
- Examples of cells used for producing a recombinant protein include mammalian cells such as COS cells, CH0 cells, and NIH3T3 cells, insect cells such as Sf9 cells, yeast cells, and E. coli.
- the vector for expressing the recombinant protein in the cell varies depending on the host cell.
- Examples of the vector for mammalian cells include pcDNA3 (manufactured by Invitrogen) and pEF-BOS (Nucleic Acids. Res. 1990, 18 (17), p5322), etc.
- one of the insect cell vectors is "BAC-to-BAC baculovirus expression systenu (GIBCO BRL)", etc.
- the yeast cell vector is "Pichia Expression Kit".
- Escherichia coli vectors examples include pGEX-5X-1 (Pharmacia) and "QIAexpress systemj (Qiagen)".
- the calcium phosphate method, the DEAE dextran method, the method using Cationic Ribosome D0TAP (manufactured by Behringer Mannheim), the electroporation method, the calcium chloride method, etc. can be used. Purification of the recombinant protein from the transformant can be carried out by a conventional method, for example, the method described in the literature “The Qiaexpressionist handbook, Qiagen, Children, Germany”.
- the DNA of the present invention may be used for gene therapy for diseases caused by mutations in genomic DNA.
- the DNA of the present invention is inserted into an adenovirus vector (for example, pAdexLcw) / retrovirus vector (for example, pZIPneo) and administered in vivo.
- the administration method may be an ex vivo method or an in vivo method.
- the antisense DNA against the DNA of the present invention or a part thereof can be used as a cell growth inhibitor or an antitumor agent. is there.
- Antisense DNA is administered directly into a living body or inserted into the above vector.
- Antisense DNA can be synthesized by a method known to those skilled in the art.
- the present invention also provides a method for inhibiting the serine / threonine kinase activity of the protein of the present invention.
- the present invention relates to a method for screening a compound having an harmful activity. This screening method comprises the steps of: (a) contacting a protein of the present invention with a substrate that is phosphorylated by these proteins in the presence of a test compound to detect the kinase activity of the protein of the present invention; and (b) Comparing the kinase activity detected in step (a) with the kinase activity detected in the absence of the test compound to select a compound that reduces the kinase activity of the protein of the present invention.
- the test compound used in this screening method is not particularly limited, and includes a low-molecular compound, a protein (including the antibody of the present invention), a peptide and the like.
- the test compound may be artificially synthesized or natural.
- the substrate include casein and IkB protein.
- the kinase activity of the protein of the present invention can be determined, for example, by adding ATP having a radiolabeled phosphate to a reaction system containing the protein of the present invention and a substrate, and measuring the radioactivity of the phosphate bound to the substrate. It can be detected in a specified manner. Specifically, it can be detected according to the method described in Example 9. The compound isolated in this way can be used as a cytostatic or antitumor agent.
- the “VRK1” protein phosphorylates the IkB protein.
- IkB is thought to undergo rapid degradation upon phosphorylation, thereby releasing bound NF-kB and activating NF-kB.
- NF-kB is a central transcriptional regulator that causes a wide range of immune and inflammatory responses. Therefore, the compound of the present invention that inhibits the kinase activity of the protein may be used as an anti-inflammatory agent and an anti-immune agent.
- FIG. 1 is a diagram showing an adapter used for preparing a subtraction library.
- FIG. 2A is a diagram showing a consensus sequence of the active site of serine / threonine kinase
- FIG. 2B is a diagram showing a consensus sequence of the protein kinase ATP binding site.
- FIG. 3 shows the nucleotide sequence and amino acid sequence of the fls223 clone.
- FIG. 4 is an electrophoretic image showing the results of RT-PCR analysis for detecting the expression of VRK1 and VRK2 in fetal liver and adult liver.
- A indicates an adult liver (Aduliver) and “F” indicates a fetal liver (Fetal liver).
- “Low”, “medium” and “high” indicate the level of the PCR cycle.
- FIG. 5 is a diagram showing a comparison of the amino acid sequences of VRK1 and B1R.
- FIG. 6 is a diagram showing a comparison of the amino acid sequences of VRK1 and VRK2.
- FIG. 7 is a diagram showing a comparison of the amino acid sequences of VRK2 and B1R.
- FIG. 8 is an electrophoretic image showing the result of analyzing the expression of VRK1 and VRK2 genes in various cells by Northern printing.
- FIG. 9 is an electrophoretic image showing Western plotting analysis using an anti-c_Myc antibody. 1 was detected using a cell extract of C0S7 cells transfected with pcDNA3 plasmid DNA and 2 with pcDNA3 / Vlmyc plasmid DNA, respectively.
- FIG. 10 is an electrophoresis image showing Northern analysis using VRK1 cDNA as a probe.
- 1 is pCOS plasmid DNA
- 2 is total RNA prepared from NIH3T3 cells transfected with pCOS / VRKlw plasmid DNA
- 3 is total RNA prepared from human liver cancer cell line HepG2 cells. did.
- FIG. 11 is a photomicrograph showing the results of the colony attachment.
- PC0S detected pCOS plasmid DNA
- pCOS / VMlw detected cell pools obtained by transfection of pCOS / VMlw plasmid DNA into NIH3T3 cells.
- FIG. 12 shows an electrophoresis image (CBB staining) of the purified GST fusion protein. 1 was detected using the wild-type VRK1 protein, and 2 was detected using the mutant VRK1 protein.
- FIG. 13 shows an electrophoresis image showing the results of the kinase assay.
- the added protein is indicated by a “+” at the top.
- Arrows indicate “A” for phosphorylated GST-VRK1 (autophosphorylation), “C” for phosphorylated casein, “I” for phosphorylated GST-IkB, and “P” for phosphorylation.
- the C-terminal peptides of IkB were shown.
- FIG. 14 shows an electrophoresis image showing the results of the kinase assay. The reaction was performed in the presence of the divalent cations of the type and concentration shown on the right. Arrows indicate “A” for phosphorylated GST-VRK1 (autophosphorylation) and “C” for phosphorylated casein.
- FIG. 15 is an electrophoretic image showing the results of pelleting using a K562 cell extract with an anti-VM1 peptide antibody. BEST MODE FOR CARRYING OUT THE INVENTION
- the subtraction library was prepared using the PCR-Select TM cDNA Subtraction kit (manufactured by CLONT ECH) and the method of Luda Diatchenko et al. (Proc. Natl. Acad. Sci. USA, Vol. 93, 6025-6030, 1996).
- double-stranded cDNA was synthesized from polyA + MA derived from human fetal liver and polyA + RNA derived from human adult liver by a standard method using MLV reverse transcriptase.
- the cDNA end was blunt-ended with T4 DNA polymerase, and further cut with Rsal.
- a part of the fetal liver-derived cDNA (tester) was divided into two parts, and adapter-1 and adapter-2 (Fig.
- PCR primer 1 SEQ ID NO: 5
- PCR primer 2 SEQ ID NO: 6
- This product was purified using the “QIAquick PCR Purification Kit” (manufactured by QIAGEN) and cloned into the pT7Blue-T vector (manufactured by Novagen) using the TA cloning method to obtain a subtraction library.
- QIAquick PCR Purification Kit manufactured by QIAGEN
- cloned into the pT7Blue-T vector manufactured by Novagen
- Sequencing is performed using plasmid DNA prepared by the alkaline SDS method or a colony PCR product as type III, and cycle sequencing using the ABI PRISM TM Dye Terminator Cycle Sequencing Rapid Reaction Kit With AmplyTaq DNA Polymerase, FS. And analyzed by ABI 377 DNA Sequencer.
- the colony PCR was performed by placing the recombinant in a PCR reaction solution containing the vector primers “M13 P4-22 primer” (SEQ ID NO: 9) and “M13 P5-22 primer” (SEQ ID NO: 10). This was performed by directly suspending the colonies having the colonies. After the PCR reaction, unreacted primers, nucleotides, and the like were removed from the amplified insert DNA by gel filtration or the like, and used as a sequencing type III.
- the fls223 clone (261 bp) (later renamed “VRK1”) has a consensus sequence of the active site of serine / threonine kinase ([Leu, Ile, Val, Met, Phe, Tyr, Cys] -Xaa- [His, Tyr] -Xaa-Asp- [Leu, Ile, Val, Met, Phe, Tyr] -Lys-Xaa-Xaa-Asn- [Leu, Ile, Val, Met, Phe, Tyr, Cys, Thr] -[Leu, Ile, Val, Met, Phe, Tyr, Cys, Thr]-[Leu, He, Val, Met, Phe, Tyr, Cys, Thr]) (173 to 185 of the amino acid described in SEQ ID NO: 2) (Fig. 2A) (Fig. 3A).
- a gene completely matching the nucleotide sequence of this clone was not
- Single-stranded cDNA was synthesized from polyA + RNA extracted from fetal liver and adult liver by the standard method using SUPERSCRIPT TM II RNase H Reverse Transcriptase (GIBCO BRL). It was used as type II of PCR assay.
- TaqRaTaq (TaKaRa) was used as a Taq polymerase for PCR, and a hot-start method was performed by adding TaqStart TM Antibody (CLONTECH) to this.
- "FLS223 SI primer” SEQ ID NO: 11
- FLS223 A1 primer 1 SEQ ID NO: 12
- G3PDH glycosyde 3-phosphate dehydrogenase
- the G3PDH was used. G3PDH was amplified using "hG3PDH5, primer-1" (SEQ ID NO: 13) and "hG3PDH3'primer-1" (SEQ ID NO: 14). From this RT-PCR analysis, it was confirmed that fls223 clone was expressed more strongly in fetal liver, although its expression was observed in adult liver (Fig. 4). Then, the cloning of the full-length cDNA was carried out for the purpose of further detailed analysis of this gene.
- a cDNA prepared with a Marathon TM Ready cDNA (CLONTECH) or a cDNA produced by a Marathon TM cDNA Amplification Kit (CLONTECH) is used as type III, and 5, RACE and 3, RACE (Chenchik A. et al., CLONTECHniques X, 1, 5-8, 1995).
- the PCI was hot-started using TaKaRa Ex Taq (TaKaRa) and TaqStart TM Antibody (CLONTECH). After the reaction, the band that appeared was recovered using a QIAquick Gel Extraction Kit (manufactured by QIAGEN) and subcloned into pT7Blue-T vector-1 (manufactured by Novagen).
- fls223 full-length cDNA encodes an open reading frame consisting of 396 amino acids (see SEQ ID NO: 1).
- the consensus sequence of the protein kinase ATP binding site [Leu, Ile, Val] -Gly-Xaa-Gly-Xaa- [Phe, Tyr, Trp, Met, Gly, Ser, Thr, Asn, His]-[Ser, Gly, Ala] -Xaa- [Leu, Ile, Val, Cys, Ala, Thr] -Xaa-Xaa- [Gly, Ser, Thr, Ala, Cys, Leu, Ile, Val , Met, Phe, Tyr] -Xaa (5 times or 18 times)-[Leu, lie, Val, Met, Phe, Tyr, Trp, Cys, Ser, Thr, Ala, Arg]-[Ala, Ile, Val
- the B1R gene encodes a protein consisting of 300 amino acids, and contains a protein kinase ATP binding site-like sequence and a consensus sequence for the serine / threonine kinase active site.
- B1R kinase is an early gene that is expressed as early as several hours after infection with vaccinia virus and then repressed. It has been clarified that mutants with point mutations in this gene stop virus growth during DNA replication, suggesting that B1R kinase controls the replication mechanism of viral DNA. A hypothesis has been proposed (J. Biol. Chem., 264, 21458-21461, 1989).
- VRK1 also shows clear homology with B1R kinase in regions other than the serine / threonine kinase region. Therefore, it may be involved in the control mechanism of DNA replication of cells, or in a broader sense, the control mechanism of cell proliferation, as in the case of viruses. This is supported by the fact that VRK1 is more strongly expressed in highly proliferative cells-rich tissues such as fetal liver and testis.
- this gene is also a new serine / thread. It was thought to encode onin kinase. This amino acid sequence showed extremely high homology with VRK1, especially near the kinase region (FIG. 6), and also showed high homology with vaccinia virus B1R kinase (FIG. 7). Based on these facts, it was presumed that this kinase was also closely related to B1R kinase, and was named "Vaccinia virus B1R kinase Related Kinase 2" (VRK2).
- VRK2 had stronger expression in fetal liver than in adult liver (Fig. 4).
- RK S2 primer SEQ ID NO: 18
- RK A2 primer SEQ ID NO: 16
- VRK2 A primer SEQ ID NO: 19
- VRK2 B primer SEQ ID NO: 20
- PCR was carried out under the conditions of “1 minute at 60 ° C, 2 minutes at 72 ° C” for 30 cycles and 5 minutes at 72 ° C.
- the obtained pattern was analyzed on the Internet (http: // www-genome. Wi.mit. Edu / cgi-bin / contig / rhmapper.pi) on the Internet to obtain a map.
- VRK1 was located between STS markers ⁇ D14S265 '' and ⁇ AFM063XE7 '' on chromosome 14, and VRK2 was sandwiched between STS markers ⁇ CHL GATA23H01 '' and ⁇ D2S357j '' on chromosome 2. was moved to the position where it was set.
- the 5 'fragment of VRK1 cDNA (the upstream part from the 546th Hindlll site) and the 5' fragment of the VRK2 cDNA (the upstream part from the 426th EcoRI site) were prepared using Ready-to-Go DNA labeling beads ( by the random primer method using the Pharmacia) Non - 3 2 P] with dCTP It was labeled and used as a probe.
- the final wash was performed at 50 ° C with 0.1 X SSC, 0.1% SDS, and the image on the filter after hybridization was analyzed using a BAS-2000I I bioimaging analyzer (Fuji Photo Film) (Manufactured by the company).
- G361 is a cell derived from malignant melanoma
- A549 is a cell derived from lung cancer
- SW480 is a cell derived from colon adenocarcinoma
- Raji is a cell derived from Burkitt lymphoma
- M0LT-4 is a cell derived from acute lymphoblastic leukemia (T cell)
- K-562 is a cell derived from chronic myeloid leukemia
- HeLaS3 is a cell derived from cervical cancer.
- HL60 is a cell derived from promyelocytic leukemia.
- VRK1 expression was relatively high in fetal tissues, and very strong expression was observed particularly in fetal liver.
- Weak VM1 expression was found in most adult tissues, but particularly strong in testis and thymus.
- the expression pattern of VRK2 was basically the same as that of VRK1, and strong expression was also observed in fetal liver and testis.
- the expression pattern of VRK1 was different from that of VRK1 in that expression was similarly observed in cancer cell lines, but not in M0LT4.
- V1S1 primer — (SEQ ID NO: 21), VM1 A1 primer (SEQ ID NO: 22), and VRK2 S1 primer (SEQ ID NO: 23), respectively.
- the amplified product was cut at the Notl site added to the end of the primer, and a DNA fragment having the correct size was purified by agarose gel electrophoresis.
- This vector has the EF1 promoter and can express the integrated cDNA strongly in a wide range of mammalian cell lines.
- clones without mutations such as PCR errors (pCOS / VRKlw, pC0S / VRK2w) are selected for subsequent forced expression and construction of plasmid DNA for further expression.
- An expression plasmid having an anti-C-Myc antibody epitope sequence (SEQ ID NO: 25) added to the C-terminus was constructed as follows. That is, about 50 ng of the pCOS / VRKlw and pC0S / VRK2w plasmid DNAs were type I, each of which was V1MYC1 primer (SEQ ID NO: 26), VRK1 MYC2 primer (SEQ ID NO: 27), and VRK2 MYC1 primer.
- a cDNA having a coding sequence with an anti-c-Myc antibody epitope added to the C-terminus was amplified by PCR using I (SEQ ID NO: 28) and VRK2 MYC2 primer (SEQ ID NO: 29).
- KOD MA polymerase manufactured by Toyobo Co., Ltd.
- This amplification product was cut with a BajnHI site added to the end of the primer, and a DNA fragment having the correct size was purified by agarose gel electrophoresis. This was cut in advance with BamHI, and incorporated into pcDNA3 vector (Invitrogen) whose terminal was dephosphorylated with Alfa rifophosphatase / CIAP (Takara Shuzo).
- pcDN A3 / VRKlmyc, pcDNA3 / VRK2myc By sequencing the obtained subclones, clones (pcDN A3 / VRKlmyc, pcDNA3 / VRK2myc) having no mutation such as PCR error were selected and used for the subsequent experiments.
- Plasmid DNA for expression as a fusion protein with glutathione-S-transferase (GST) protein by Escherichia coli was constructed as follows. That is, pCOS / VRKlw and pC0S / VM2w plasmid DNAs were designated as type I, and they were VRK1 H3 primer (SEQ ID NO: 30), VRK1 H4 primer (SEQ ID NO: 31), and VRK2 H3 primer (sequence). The coding region was amplified by PCR using No. 32) and VRK2 H4 primer (SEQ ID NO: 33).
- This amplification product was cut with a BamHI site added to the end of the primer, and a DNA fragment having the correct size was purified by agarose gel electrophoresis. This was cut with BajnHI in advance and incorporated into pGEX-5X-l vector (Pharmacia) whose terminal was dephosphorylated with alkaline phosphatase / CIAP (Takara Shuzo). By sequencing the obtained subclones, clones (pGEX / VRKlw, pGEX / VRK2w) having no mutation such as PCR error were selected and used for the subsequent experiments.
- clones in which a mutation was introduced into the putative ATP-binding site was carried out as follows using Chameleon 1 "Double-Stranded Site-Directed Mutagenesis Kit (manufactured by STRATAGENE). Approximately 1 g of pGEX / VRKlw plasmid DNA, VRK1 KW1 primer (SEQ ID NO: 34), and a selection primer, Selectl primer (SEQ ID NO: 35), are mixed for 5 minutes.
- pcDNA3 / VRKlmyc plasmid DNA and pcDNA3 plasmid DNA were introduced (transfection) into C0S7 cells by a method using SuperFect (manufactured by Qiagen). That is, about 10 f C0S7 cells were sown in a 10 cm dish, cultured overnight, added with a mixture of 10 ⁇ g of plasmid DNA and 601 SuperFect, and cultured for about 3 hours. After that, the culture solution was replaced with a new one, and after further culturing for 2 days, the cells were removed with a trypsin-EDTA solution and collected.
- SuperFect manufactured by Qiagen
- pCOS / VRKlw plasmid DNA and pCOS plasmid DNA were ligated to NIH by a method using a force-ionic phospholipid D0TAP (Boehringer-Mannheim). It was introduced into 3T3 cells. After the transfection, transformed cells were selected by adding G418 (manufactured by GIBC0-BRL) at a final concentration of 500 ⁇ g / ml to the culture solution. From the thus obtained pools of transformed cells, total RNA was prepared by a method using IS0GEN (manufactured by Wako Pure Chemical Industries, Ltd.), and Northern blotting was performed using VRK1 cDNA as a probe.
- G418 manufactured by GIBC0-BRL
- Example 9 Expression of VRK1 Protein in Escherichia coli and Kinase Atsushi Wild-type and mutant VRK1 proteins were expressed as a fusion protein with GST protein by Escherichia coli and purified. That is, after cultivating the above-mentioned pGEX / VRKlw and PGEX / VRK1K71W plasmid DNA in Escherichia coli DH5 strain at 37 ° C overnight in 10 ml of 2xYT medium, a part of this was cultured in a new 2xYT medium. After diluting 100-fold, culture was continued at 37 ° C until the 0D at 600 nm became 0.6.
- IPTG isopropyl-/?-D (-)-thiogalactovyranoside
- a final concentration of O. lmM was added to a final concentration of O. lmM
- Escherichia coli was collected by centrifugation, suspended in 13 ⁇ 4 Triton X-100, 13 ⁇ 4 Tween 20, and PBS, and subjected to sonication to disrupt the cells and solubilize the protein. From this solubilized sample, wild-type and mutant VRK1 proteins expressed as fusion proteins with GST protein were purified by affinity purification using glutathione Sepharose 4B (Pharmacia). Purified.
- Kinase Attay contains wild-type or mutant VRK1 protein 0.2 / g, 50 mM Tris-HCl (PH7.2), ImM dithiothreitol (DTT), 2 mM or 10 mM divalent cathon (Mg, Mn, Zn, Ca), Substrate protein ⁇ 5 ⁇ g, [ ⁇ : 2 P] ATP 3000 Ci / mM, 10 mCi / m 1 (manufactured by Amersham) 1 ⁇ 1 and the total amount was 50 ⁇ 1.
- a buffer system 40 mM buffer pH 7.4, ImM DTT, and 2.5 mM EGTA were used as a buffer system.
- histone manufactured by Nakarai
- casein manufactured by Sigma
- myelin basic protein / MBP manufactured by Sigma
- GST GST-IkBa
- C-terminal of IkB Using the side peptide (SEQ ID NO: 36), a reaction was carried out at 37 ° C. for 30 minutes in the presence of lOrnM Mg.
- the reaction solution was subjected to SDS-PAGE, and the radioactivity of the phosphorylated protein was analyzed using a BAS200011 Bioimaging Analyzer-1 (Fuji Photo Film Co., Ltd.). The results showed that wild-type VM1 protein phosphorylates casein and GST-1 kB (Fig. 13).
- a mutant VRK1 in which a mutation was introduced into the putative ATP binding site was used, no phosphorylation was observed, indicating that VM1 is a protein kinase having a general catalytic site.
- GST protein was not phosphorylated at all by VRK1, phosphorylation in the GST-IkB protein was considered to be occurring not in the GST site but in the IkB protein.
- IkB is thought to be a factor that negatively regulates the function of NF-kB by forming a complex with NF-kB, a transcriptional regulator. It is widely accepted that IkBa is inactivated by being phosphorylated and rapidly degraded by proteolysis, and activated by releasing NF-kB. NF-kB is thought to be a central transcriptional regulator that triggers a wide range of immune and inflammatory responses, and kinases that phosphorylate IkB are therefore important as target molecules for anti-inflammatory drugs. Since VRK1 has an activity to strongly phosphorylate IkB in vitro, it is possible that VRK1 also participates in the activation of NF-kB by phosphorylating IkB in vivo. Therefore, it was considered that an anti-inflammatory effect or an anti-immune effect could be expected by inhibiting the kinase activity of VRK1 or reducing the amount of protein.
- a peptide corresponding to the C-terminal sequence of the deduced amino acid sequence of VM1 was synthesized (Suddy Technology I) and mediated by m-maleimide benzoinole-N-hydroxysuccinimide ester (MBS). According to the method described above, the amino-terminal cysteine was bound to keyhole lysate and to mothocyanin (KLH). This was used as an antigen to immunize the egret and obtain an antiserum. From this antiserum, an antibody specifically reacting with the peptide was affinity purified using an affinity column prepared by binding the peptide to Cell mouth fine (manufactured by Seikagaku Corporation).
- the serine / threonine kinase gene isolated by the present inventors has significant homology to the vaccinia virus gene which has been suggested to be involved in DNA replication and is strongly expressed in highly proliferative cells. Is shown. Furthermore, overexpression of the protein encoded by the gene significantly enhances the proliferative activity of the cells. Therefore, the isolated serine / threonine kinase gene is considered to be particularly involved in the control of cell proliferation and the like. Therefore, a drug targeting the gene of the present invention (such as antisense DNA) or a drug capable of regulating its expression, or a drug capable of controlling the activity of the protein encoded by the gene of the present invention is required. By screening, it is possible to develop cell growth inhibitors and antitumor drugs based on a new mechanism of action. Sequence listing
- Sequence type nucleic acid
- AGT TAC AGG TTT ATG ATA ATG GAT CGC TTT GGG AGT GAC CTT CAG AAA 495 Ser Tyr Arg Phe Met lie Met Asp Arg Phe Gly Ser Asp Leu Gin Lys
- Leu Ser Leu Arg lie Leu Asp lie Leu Glu Tyr lie His Glu His Glu
- Glu Glu Ala lie Gin Thr Arg Ser Arg Thr Arg Lys Arg Val Gin Lys
- Sequence type nucleic acid
- TCC TAC AGA TAT TGT CCC AAT GGG AAC CAC AAA CAG TAT CAG GAA AAT 745 Ser Tyr Arg Tyr Cys Pro Asn Gly Asn His Lys Gin Tyr Gin Glu Asn
- ATA CCT GTC CTT TTG ATG TTA GTA TTT CTT GCT TTA TTT TTT CTC 1654 lie Pro Val Leu Leu Met Leu Val Phe Leu Ala Leu Phe Phe Leu
- Cys Glu lie Ala Gin Phe Leu Val Cys Ala His Ser Leu Ala Tyr Asp
- Sequence type nucleic acid
- Sequence type nucleic acid
- Sequence type nucleic acid
- Sequence type nucleic acid
- Sequence type nucleic acid
- Sequence type nucleic acid
- Sequence type nucleic acid
- Sequence type nucleic acid
- Sequence type nucleic acid
- Sequence type nucleic acid
- Sequence type nucleic acid
- Sequence type nucleic acid
- Sequence type nucleic acid
- AAAAATTATC AAAAGGAATT TTGG 24 SEQ ID NO: 20
- Sequence type nucleic acid
- Sequence type nucleic acid
- Sequence type nucleic acid
- Sequence type nucleic acid
- Sequence type nucleic acid
- Sequence type nucleic acid
- Sequence type nucleic acid
- Sequence type nucleic acid
- Sequence type nucleic acid
- Sequence type nucleic acid
- Sequence type nucleic acid
- Sequence type nucleic acid
- Sequence type nucleic acid
- Sequence type nucleic acid Number of chains: single strand
- Sequence type nucleic acid
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- Life Sciences & Earth Sciences (AREA)
- Chemical & Material Sciences (AREA)
- Health & Medical Sciences (AREA)
- Organic Chemistry (AREA)
- Wood Science & Technology (AREA)
- Zoology (AREA)
- Bioinformatics & Cheminformatics (AREA)
- Engineering & Computer Science (AREA)
- Genetics & Genomics (AREA)
- Biochemistry (AREA)
- General Health & Medical Sciences (AREA)
- General Engineering & Computer Science (AREA)
- Molecular Biology (AREA)
- Medicinal Chemistry (AREA)
- Biomedical Technology (AREA)
- Biotechnology (AREA)
- Microbiology (AREA)
- Enzymes And Modification Thereof (AREA)
- Micro-Organisms Or Cultivation Processes Thereof (AREA)
- Medicines Containing Material From Animals Or Micro-Organisms (AREA)
Description
Claims
Priority Applications (6)
Application Number | Priority Date | Filing Date | Title |
---|---|---|---|
JP52985598A JP4121155B2 (ja) | 1996-12-27 | 1997-12-25 | 新規なセリン/スレオニンキナーゼ遺伝子 |
AU53406/98A AU5340698A (en) | 1996-12-27 | 1997-12-25 | Novel serine-threonine kinase gene |
EP97950408A EP0960938A4 (en) | 1996-12-27 | 1997-12-25 | NEW GENE OF SERINE-THREONINE KINASE |
US09/344,700 US6265194B1 (en) | 1996-12-27 | 1999-06-25 | Serine-threonine kinase gene |
US09/563,997 US6677437B1 (en) | 1996-12-27 | 2000-05-03 | Serine-threonine kinase gene |
US10/434,588 US7186536B2 (en) | 1996-12-27 | 2003-05-09 | Serine-threonine kinase gene |
Applications Claiming Priority (2)
Application Number | Priority Date | Filing Date | Title |
---|---|---|---|
JP8/357864 | 1996-12-27 | ||
JP35786496 | 1996-12-27 |
Related Child Applications (1)
Application Number | Title | Priority Date | Filing Date |
---|---|---|---|
US09/344,700 Continuation-In-Part US6265194B1 (en) | 1996-12-27 | 1999-06-25 | Serine-threonine kinase gene |
Publications (1)
Publication Number | Publication Date |
---|---|
WO1998029552A1 true WO1998029552A1 (fr) | 1998-07-09 |
Family
ID=18456329
Family Applications (1)
Application Number | Title | Priority Date | Filing Date |
---|---|---|---|
PCT/JP1997/004855 WO1998029552A1 (fr) | 1996-12-27 | 1997-12-25 | Nouveau gene de serine-threonine kinase |
Country Status (5)
Country | Link |
---|---|
US (1) | US6265194B1 (ja) |
EP (1) | EP0960938A4 (ja) |
JP (1) | JP4121155B2 (ja) |
AU (1) | AU5340698A (ja) |
WO (1) | WO1998029552A1 (ja) |
Cited By (7)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
WO1999011794A2 (en) * | 1997-09-04 | 1999-03-11 | Incyte Pharmaceuticals, Inc. | New vrk1 kinase |
WO2000015770A2 (en) * | 1998-09-16 | 2000-03-23 | Incyte Pharmaceuticals, Inc. | Human serine/threonine protein kinases |
WO2000056754A1 (en) * | 1999-03-19 | 2000-09-28 | Human Genome Sciences, Inc. | 48 human secreted proteins |
WO2001011086A2 (en) * | 1999-08-11 | 2001-02-15 | Eos Biotechnology, Inc. | Methods of screening for angiogenesis modulators |
DE10011530A1 (de) * | 2000-03-13 | 2001-09-27 | Robert Elez | Hochwirksame Antisense-Oligodesoxynucleotide gegen Polio-like Kinasel |
WO2006038289A1 (ja) * | 2004-10-01 | 2006-04-13 | Oncorex, Inc. | Pim-1活性/蛋白阻害医薬品 |
CN117106090A (zh) * | 2023-08-15 | 2023-11-24 | 十堰市太和医院(湖北医药学院附属医院) | 一种靶向GSK3β的纳米抗体及其制备方法 |
Families Citing this family (3)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
EP1242616A2 (en) * | 1999-12-06 | 2002-09-25 | Axxima Pharmaceuticals Aktiengesellschaft | Method for identification and quantification of kinase inhibitors |
WO2002055713A2 (en) * | 2000-12-08 | 2002-07-18 | Millennium Pharm Inc | 58848, a human protein kinase family member and uses therefor |
ES2255811B1 (es) * | 2004-05-12 | 2007-07-16 | Laboratorios Indas, S.A. | Metodo para el diagnostico de cancer y/o pronostico de tratamientos oncologicos. |
Family Cites Families (4)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
US5925557A (en) * | 1994-09-29 | 1999-07-20 | The Regents Of The University Of California | DNA encoding mitogen activated protein kinase, FRK |
EP0816501B1 (en) * | 1995-03-16 | 2005-06-01 | Chugai Seiyaku Kabushiki Kaisha | Dna encoding protein kinase |
US5885803A (en) * | 1997-06-19 | 1999-03-23 | Incyte Pharmaceuticals, Inc. | Disease associated protein kinases |
WO1999011794A2 (en) * | 1997-09-04 | 1999-03-11 | Incyte Pharmaceuticals, Inc. | New vrk1 kinase |
-
1997
- 1997-12-25 AU AU53406/98A patent/AU5340698A/en not_active Abandoned
- 1997-12-25 JP JP52985598A patent/JP4121155B2/ja not_active Expired - Fee Related
- 1997-12-25 EP EP97950408A patent/EP0960938A4/en not_active Withdrawn
- 1997-12-25 WO PCT/JP1997/004855 patent/WO1998029552A1/ja not_active Application Discontinuation
-
1999
- 1999-06-25 US US09/344,700 patent/US6265194B1/en not_active Expired - Lifetime
Non-Patent Citations (3)
Title |
---|
MAIER A. A.: "OPTICAL SWITCHES, TRANSISTORS, AND MULTIVIBRATORS, STABLE TO PHASE INSTABILITY OF THE SIGNAL.", SOVIET PHYSICS DOKLADY., AMERICAN INSTITUTE OF PHYSICS. NEW YORK., US, vol. 35., no. 06., 1 June 1990 (1990-06-01), US, pages 544 - 546., XP000203365 * |
NEZU J.-I., ET AL.: "IDENTIFICATION OF TWO NOVEL HUMAN PUTATIVE SERINE/THREONINE KINASESVRK1 AND VRK2, WITH STRUCTURAL SIMILARITY TO VACCINIA VIRUS B1R KINASE.", GENOMICS, ACADEMIC PRESS, SAN DIEGO., US, vol. 45., no. 02., 15 October 1997 (1997-10-15), US, pages 327 - 331., XP000872493, ISSN: 0888-7543, DOI: 10.1006/geno.1997.4938 * |
See also references of EP0960938A4 * |
Cited By (11)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
WO1999011794A2 (en) * | 1997-09-04 | 1999-03-11 | Incyte Pharmaceuticals, Inc. | New vrk1 kinase |
WO1999011794A3 (en) * | 1997-09-04 | 1999-07-08 | Incyte Pharma Inc | New vrk1 kinase |
WO2000015770A2 (en) * | 1998-09-16 | 2000-03-23 | Incyte Pharmaceuticals, Inc. | Human serine/threonine protein kinases |
WO2000015770A3 (en) * | 1998-09-16 | 2000-07-06 | Incyte Pharma Inc | Human serine/threonine protein kinases |
WO2000056754A1 (en) * | 1999-03-19 | 2000-09-28 | Human Genome Sciences, Inc. | 48 human secreted proteins |
WO2001011086A2 (en) * | 1999-08-11 | 2001-02-15 | Eos Biotechnology, Inc. | Methods of screening for angiogenesis modulators |
WO2001011086A3 (en) * | 1999-08-11 | 2002-03-07 | Eos Biotechnology Inc | Methods of screening for angiogenesis modulators |
DE10011530A1 (de) * | 2000-03-13 | 2001-09-27 | Robert Elez | Hochwirksame Antisense-Oligodesoxynucleotide gegen Polio-like Kinasel |
WO2006038289A1 (ja) * | 2004-10-01 | 2006-04-13 | Oncorex, Inc. | Pim-1活性/蛋白阻害医薬品 |
CN117106090A (zh) * | 2023-08-15 | 2023-11-24 | 十堰市太和医院(湖北医药学院附属医院) | 一种靶向GSK3β的纳米抗体及其制备方法 |
CN117106090B (zh) * | 2023-08-15 | 2024-02-09 | 十堰市太和医院(湖北医药学院附属医院) | 一种靶向GSK3β的纳米抗体及其制备方法 |
Also Published As
Publication number | Publication date |
---|---|
US6265194B1 (en) | 2001-07-24 |
JP4121155B2 (ja) | 2008-07-23 |
AU5340698A (en) | 1998-07-31 |
EP0960938A4 (en) | 2001-12-05 |
EP0960938A1 (en) | 1999-12-01 |
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