SG11201805600VA - Deep sequencing profiling of tumors - Google Patents

Deep sequencing profiling of tumors

Info

Publication number
SG11201805600VA
SG11201805600VA SG11201805600VA SG11201805600VA SG11201805600VA SG 11201805600V A SG11201805600V A SG 11201805600VA SG 11201805600V A SG11201805600V A SG 11201805600VA SG 11201805600V A SG11201805600V A SG 11201805600VA SG 11201805600V A SG11201805600V A SG 11201805600VA
Authority
SG
Singapore
Prior art keywords
international
arizona
sequencing
applicants
pct
Prior art date
Application number
SG11201805600VA
Other languages
English (en)
Inventor
Nelson Alexander
Daniel Burgess
Stacey Stanislaw
Heidi Rosenbaum
Original Assignee
Ventana Med Syst Inc
Hoffmann La Roche
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Ventana Med Syst Inc, Hoffmann La Roche filed Critical Ventana Med Syst Inc
Publication of SG11201805600VA publication Critical patent/SG11201805600VA/en

Links

Classifications

    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6869Methods for sequencing
    • C12Q1/6874Methods for sequencing involving nucleic acid arrays, e.g. sequencing by hybridisation
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6806Preparing nucleic acids for analysis, e.g. for polymerase chain reaction [PCR] assay
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6869Methods for sequencing
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2527/00Reactions demanding special reaction conditions
    • C12Q2527/146Concentration of target or template
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2531/00Reactions of nucleic acids characterised by
    • C12Q2531/10Reactions of nucleic acids characterised by the purpose being amplify/increase the copy number of target nucleic acid
    • C12Q2531/113PCR

Landscapes

  • Chemical & Material Sciences (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Organic Chemistry (AREA)
  • Health & Medical Sciences (AREA)
  • Wood Science & Technology (AREA)
  • Engineering & Computer Science (AREA)
  • Zoology (AREA)
  • Analytical Chemistry (AREA)
  • Biochemistry (AREA)
  • General Health & Medical Sciences (AREA)
  • Molecular Biology (AREA)
  • Physics & Mathematics (AREA)
  • Immunology (AREA)
  • Biotechnology (AREA)
  • Biophysics (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • General Engineering & Computer Science (AREA)
  • Microbiology (AREA)
  • Genetics & Genomics (AREA)
  • Chemical Kinetics & Catalysis (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
  • Investigating Or Analysing Biological Materials (AREA)
  • Respiratory Apparatuses And Protective Means (AREA)
  • Prostheses (AREA)
  • Orthopedics, Nursing, And Contraception (AREA)
SG11201805600VA 2016-01-15 2016-11-07 Deep sequencing profiling of tumors SG11201805600VA (en)

Applications Claiming Priority (3)

Application Number Priority Date Filing Date Title
US201662279126P 2016-01-15 2016-01-15
US201662415952P 2016-11-01 2016-11-01
PCT/US2016/060835 WO2017123316A1 (fr) 2016-01-15 2016-11-07 Profilage de tumeurs par séquençage profond

Publications (1)

Publication Number Publication Date
SG11201805600VA true SG11201805600VA (en) 2018-07-30

Family

ID=57396824

Family Applications (1)

Application Number Title Priority Date Filing Date
SG11201805600VA SG11201805600VA (en) 2016-01-15 2016-11-07 Deep sequencing profiling of tumors

Country Status (12)

Country Link
US (2) US11649492B2 (fr)
EP (1) EP3402896B1 (fr)
JP (2) JP7232643B2 (fr)
KR (1) KR102398465B1 (fr)
CN (1) CN108463559A (fr)
AU (1) AU2016386032B2 (fr)
CA (1) CA3011342C (fr)
IL (1) IL260304A (fr)
SA (1) SA518392005B1 (fr)
SG (1) SG11201805600VA (fr)
WO (1) WO2017123316A1 (fr)
ZA (1) ZA201804322B (fr)

Families Citing this family (11)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
CN110016499B (zh) 2011-04-15 2023-11-14 约翰·霍普金斯大学 安全测序系统
ES2701742T3 (es) 2012-10-29 2019-02-25 Univ Johns Hopkins Prueba de Papanicolaou para cánceres de ovario y de endometrio
WO2017027653A1 (fr) 2015-08-11 2017-02-16 The Johns Hopkins University Analyse du fluide d'un kyste ovarien
CA3011342C (fr) * 2016-01-15 2023-03-14 Ventana Medical Systems, Inc. Profilage de tumeurs par sequencage profond
WO2019067092A1 (fr) 2017-08-07 2019-04-04 The Johns Hopkins University Méthodes et substances pour l'évaluation et le traitement du cancer
US20200004928A1 (en) 2018-06-29 2020-01-02 Roche Sequencing Solutions, Inc. Computing device with improved user interface for interpreting and visualizing data
CN109234356B (zh) * 2018-09-18 2021-10-08 南京迪康金诺生物技术有限公司 一种构建杂交捕获测序文库的方法及应用
JP7479367B2 (ja) * 2018-11-29 2024-05-08 ヴェンタナ メディカル システムズ, インク. 代表的なDNAシーケンシングによる個別化されたctDNA疾患のモニタリング
EP3899951A1 (fr) 2018-12-23 2021-10-27 F. Hoffmann-La Roche AG Classification de tumeur basée sur une charge mutationnelle tumorale prédite
CN113939881A (zh) 2019-06-13 2022-01-14 豪夫迈·罗氏有限公司 具有用于解读和可视化纵向数据的改进的用户界面的系统和方法
EP4342928A1 (fr) 2021-05-20 2024-03-27 Agc Inc. Procédé de production d'un polycarbonate

Family Cites Families (20)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US4000159A (en) 1974-06-28 1976-12-28 Phillips Petroleum Company Preparation of n,n-disubstituted thioamides
US4965188A (en) 1986-08-22 1990-10-23 Cetus Corporation Process for amplifying, detecting, and/or cloning nucleic acid sequences using a thermostable enzyme
US4683195A (en) 1986-01-30 1987-07-28 Cetus Corporation Process for amplifying, detecting, and/or-cloning nucleic acid sequences
US4683202A (en) 1985-03-28 1987-07-28 Cetus Corporation Process for amplifying nucleic acid sequences
US5176995A (en) 1985-03-28 1993-01-05 Hoffmann-La Roche Inc. Detection of viruses by amplification and hybridization
WO2009061840A1 (fr) * 2007-11-05 2009-05-14 Complete Genomics, Inc. Procédés et conceptions d'oligonucléotide pour une insertion d'adaptateurs multiples en utilisant une méthylation sélective
US8592150B2 (en) * 2007-12-05 2013-11-26 Complete Genomics, Inc. Methods and compositions for long fragment read sequencing
SG193776A1 (en) * 2007-12-05 2013-10-30 Complete Genomics Inc Efficient base determination in sequencing reactions
EP2245198A1 (fr) * 2008-02-04 2010-11-03 Massachusetts Institute of Technology Sélection d'acides nucléiques par hybridation en solution en amorces oligonucléotidiques
WO2011002029A1 (fr) 2009-07-03 2011-01-06 国立大学法人東京大学 Procédé pour la détermination de la présence d'une cellule cancéreuse et procédé de détermination d'un pronostic d'un patient présentant un cancer
EP3072968A1 (fr) 2010-02-25 2016-09-28 Advanced Liquid Logic, Inc. Procede de fabrication de banques d'acide nucleique
WO2012024658A2 (fr) 2010-08-20 2012-02-23 IntegenX, Inc. Système d'analyse intégrée
KR20190002733A (ko) * 2010-12-30 2019-01-08 파운데이션 메디신 인코포레이티드 종양 샘플의 다유전자 분석의 최적화
GB2497510A (en) 2011-11-10 2013-06-19 Harry Cuppens Methods for determining mononucleotide sequence repeats
WO2014106076A2 (fr) 2012-12-28 2014-07-03 Quest Diagnostics Investments Incorporated Séquençage sanger universel à partir d'amplicons de séquençage de prochaine génération
WO2014144451A2 (fr) * 2013-03-15 2014-09-18 Memorial Sloan-Kettering Cancer Center Biomarqueurs pour réponse à des analogues de rapamycine
US20140278461A1 (en) 2013-03-15 2014-09-18 Memorial Sloan-Kettering Cancer Center System and method for integrating a medical sequencing apparatus and laboratory system into a medical facility
KR20160062763A (ko) 2013-10-18 2016-06-02 세븐 브릿지스 지노믹스 인크. 유전자 샘플을 유전자형 결정하기 위한 방법 및 시스템
US10415083B2 (en) 2013-10-28 2019-09-17 The Translational Genomics Research Institute Long insert-based whole genome sequencing
CA3011342C (fr) * 2016-01-15 2023-03-14 Ventana Medical Systems, Inc. Profilage de tumeurs par sequencage profond

Also Published As

Publication number Publication date
BR112018014349A2 (pt) 2019-02-12
IL260304A (en) 2018-08-30
US20230250476A1 (en) 2023-08-10
JP7232643B2 (ja) 2023-03-03
JP2019503182A (ja) 2019-02-07
AU2016386032A1 (en) 2018-07-12
KR20180098412A (ko) 2018-09-03
JP2021176302A (ja) 2021-11-11
KR102398465B1 (ko) 2022-05-13
AU2016386032B2 (en) 2021-08-12
ZA201804322B (en) 2022-10-26
SA518392005B1 (ar) 2022-02-08
CN108463559A (zh) 2018-08-28
WO2017123316A1 (fr) 2017-07-20
EP3402896B1 (fr) 2021-03-31
US20180320229A1 (en) 2018-11-08
EP3402896A1 (fr) 2018-11-21
JP7379418B2 (ja) 2023-11-14
CA3011342A1 (fr) 2017-07-20
CA3011342C (fr) 2023-03-14
US11649492B2 (en) 2023-05-16

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