NO319372B1 - Fremgangsmate, samt diagnostiske sett for bestemmelse av toksisitet ved anvendelse av bakterielle stresspromotere fusert til reporter-gener - Google Patents
Fremgangsmate, samt diagnostiske sett for bestemmelse av toksisitet ved anvendelse av bakterielle stresspromotere fusert til reporter-gener Download PDFInfo
- Publication number
- NO319372B1 NO319372B1 NO19950040A NO950040A NO319372B1 NO 319372 B1 NO319372 B1 NO 319372B1 NO 19950040 A NO19950040 A NO 19950040A NO 950040 A NO950040 A NO 950040A NO 319372 B1 NO319372 B1 NO 319372B1
- Authority
- NO
- Norway
- Prior art keywords
- stress
- promoter
- gene
- compound
- dna
- Prior art date
Links
- 238000000034 method Methods 0.000 title claims abstract description 128
- 238000009007 Diagnostic Kit Methods 0.000 title claims abstract description 30
- 231100000419 toxicity Toxicity 0.000 title claims abstract description 24
- 230000001988 toxicity Effects 0.000 title claims abstract description 24
- 230000001580 bacterial effect Effects 0.000 title claims description 33
- 108700008625 Reporter Genes Proteins 0.000 title description 4
- 230000035882 stress Effects 0.000 claims abstract description 198
- 108090000623 proteins and genes Proteins 0.000 claims abstract description 174
- 150000001875 compounds Chemical class 0.000 claims abstract description 124
- 102000004169 proteins and genes Human genes 0.000 claims abstract description 46
- 230000001147 anti-toxic effect Effects 0.000 claims abstract description 17
- 230000008650 pH stress Effects 0.000 claims abstract description 11
- 101100063439 Escherichia coli (strain K12) dinD gene Proteins 0.000 claims description 22
- CDBYLPFSWZWCQE-UHFFFAOYSA-L Sodium Carbonate Chemical compound [Na+].[Na+].[O-]C([O-])=O CDBYLPFSWZWCQE-UHFFFAOYSA-L 0.000 claims description 20
- 101150066555 lacZ gene Proteins 0.000 claims description 20
- 101150007306 nfo gene Proteins 0.000 claims description 18
- 101150027964 ada gene Proteins 0.000 claims description 17
- -1 ada-alkA Proteins 0.000 claims description 17
- 101150100366 end gene Proteins 0.000 claims description 15
- 101150019302 alkA gene Proteins 0.000 claims description 14
- 101150077981 groEL gene Proteins 0.000 claims description 14
- 101150013110 katG gene Proteins 0.000 claims description 14
- 101150036359 clpB gene Proteins 0.000 claims description 12
- 230000010335 redox stress Effects 0.000 claims description 12
- 101100509674 Mycolicibacterium smegmatis (strain ATCC 700084 / mc(2)155) katG3 gene Proteins 0.000 claims description 10
- 229940079593 drug Drugs 0.000 claims description 10
- 239000003814 drug Substances 0.000 claims description 10
- 101150102864 rpoD gene Proteins 0.000 claims description 10
- 101100149753 Drosophila melanogaster Syngr gene Proteins 0.000 claims description 9
- 101100091878 Plasmodium falciparum (isolate 3D7) rpoC2 gene Proteins 0.000 claims description 9
- 101150029016 rpo3 gene Proteins 0.000 claims description 9
- 101150076849 rpoS gene Proteins 0.000 claims description 9
- 101150117326 sigA gene Proteins 0.000 claims description 9
- 101150078419 zwf gene Proteins 0.000 claims description 9
- 101001027057 Bacillus subtilis (strain 168) Flagellin Proteins 0.000 claims description 8
- 101100174653 Dictyostelium discoideum g6pd-2 gene Proteins 0.000 claims description 7
- 101150085516 ZWF1 gene Proteins 0.000 claims description 7
- 231100000167 toxic agent Toxicity 0.000 claims description 7
- 239000003440 toxic substance Substances 0.000 claims description 7
- 101150026856 zwf2 gene Proteins 0.000 claims description 7
- 101150043276 Lon gene Proteins 0.000 claims description 5
- 101100235786 Rattus norvegicus Lonp1 gene Proteins 0.000 claims description 3
- 229940040511 liver extract Drugs 0.000 claims description 3
- 238000004113 cell culture Methods 0.000 claims 3
- 108020004414 DNA Proteins 0.000 abstract description 67
- 241000588724 Escherichia coli Species 0.000 abstract description 40
- 238000012360 testing method Methods 0.000 abstract description 26
- 239000000126 substance Substances 0.000 abstract description 24
- 241001465754 Metazoa Species 0.000 abstract description 17
- 231100000331 toxic Toxicity 0.000 abstract description 16
- 230000002588 toxic effect Effects 0.000 abstract description 16
- 108091028043 Nucleic acid sequence Proteins 0.000 abstract description 6
- 230000007248 cellular mechanism Effects 0.000 abstract description 4
- 230000009471 action Effects 0.000 abstract description 3
- 230000004637 cellular stress Effects 0.000 abstract description 3
- 238000013461 design Methods 0.000 abstract description 3
- 238000009510 drug design Methods 0.000 abstract description 3
- 230000004927 fusion Effects 0.000 description 143
- 210000004027 cell Anatomy 0.000 description 84
- 102000005936 beta-Galactosidase Human genes 0.000 description 69
- 108010005774 beta-Galactosidase Proteins 0.000 description 69
- 230000014509 gene expression Effects 0.000 description 69
- 230000006698 induction Effects 0.000 description 64
- 239000000047 product Substances 0.000 description 52
- 230000000694 effects Effects 0.000 description 38
- HEDRZPFGACZZDS-UHFFFAOYSA-N Chloroform Chemical compound ClC(Cl)Cl HEDRZPFGACZZDS-UHFFFAOYSA-N 0.000 description 36
- 239000013612 plasmid Substances 0.000 description 34
- 238000003556 assay Methods 0.000 description 32
- 239000003795 chemical substances by application Substances 0.000 description 28
- LFQSCWFLJHTTHZ-UHFFFAOYSA-N Ethanol Chemical compound CCO LFQSCWFLJHTTHZ-UHFFFAOYSA-N 0.000 description 22
- 229960000723 ampicillin Drugs 0.000 description 22
- AVKUERGKIZMTKX-NJBDSQKTSA-N ampicillin Chemical compound C1([C@@H](N)C(=O)N[C@H]2[C@H]3SC([C@@H](N3C2=O)C(O)=O)(C)C)=CC=CC=C1 AVKUERGKIZMTKX-NJBDSQKTSA-N 0.000 description 22
- 238000003780 insertion Methods 0.000 description 22
- 230000037431 insertion Effects 0.000 description 22
- 238000006243 chemical reaction Methods 0.000 description 20
- 230000015572 biosynthetic process Effects 0.000 description 18
- 239000000872 buffer Substances 0.000 description 18
- 230000006378 damage Effects 0.000 description 18
- 230000012010 growth Effects 0.000 description 18
- FIKAKWIAUPDISJ-UHFFFAOYSA-L paraquat dichloride Chemical compound [Cl-].[Cl-].C1=C[N+](C)=CC=C1C1=CC=[N+](C)C=C1 FIKAKWIAUPDISJ-UHFFFAOYSA-L 0.000 description 17
- 238000010790 dilution Methods 0.000 description 16
- 239000012895 dilution Substances 0.000 description 16
- 239000013598 vector Substances 0.000 description 16
- FAPWRFPIFSIZLT-UHFFFAOYSA-M Sodium chloride Chemical compound [Na+].[Cl-] FAPWRFPIFSIZLT-UHFFFAOYSA-M 0.000 description 15
- 210000003578 bacterial chromosome Anatomy 0.000 description 15
- 101150087539 sodA gene Proteins 0.000 description 15
- 101150017120 sod gene Proteins 0.000 description 14
- 101150018269 sodB gene Proteins 0.000 description 14
- OPIFSICVWOWJMJ-AEOCFKNESA-N 5-bromo-4-chloro-3-indolyl beta-D-galactoside Chemical compound O[C@@H]1[C@@H](O)[C@@H](O)[C@@H](CO)O[C@H]1OC1=CNC2=CC=C(Br)C(Cl)=C12 OPIFSICVWOWJMJ-AEOCFKNESA-N 0.000 description 13
- MHAJPDPJQMAIIY-UHFFFAOYSA-N Hydrogen peroxide Chemical compound OO MHAJPDPJQMAIIY-UHFFFAOYSA-N 0.000 description 13
- 239000002609 medium Substances 0.000 description 13
- OUUQCZGPVNCOIJ-UHFFFAOYSA-M Superoxide Chemical class [O-][O] OUUQCZGPVNCOIJ-UHFFFAOYSA-M 0.000 description 12
- 230000001965 increasing effect Effects 0.000 description 12
- MBABOKRGFJTBAE-UHFFFAOYSA-N methyl methanesulfonate Chemical compound COS(C)(=O)=O MBABOKRGFJTBAE-UHFFFAOYSA-N 0.000 description 12
- 239000000523 sample Substances 0.000 description 12
- 101100150784 Escherichia coli (strain K12) sulA gene Proteins 0.000 description 11
- 241000276498 Pollachius virens Species 0.000 description 11
- 238000011534 incubation Methods 0.000 description 11
- 238000003786 synthesis reaction Methods 0.000 description 11
- YBMITDXVPZOTSK-QTKMDUPCSA-N (2r,3s,4s,5r)-2,3,4,5,6-pentahydroxy-1-(2-nitrophenyl)hexan-1-one Chemical compound OC[C@@H](O)[C@H](O)[C@H](O)[C@@H](O)C(=O)C1=CC=CC=C1[N+]([O-])=O YBMITDXVPZOTSK-QTKMDUPCSA-N 0.000 description 10
- 229920001817 Agar Polymers 0.000 description 10
- 102000004190 Enzymes Human genes 0.000 description 10
- 108090000790 Enzymes Proteins 0.000 description 10
- 239000008272 agar Substances 0.000 description 10
- 229940088598 enzyme Drugs 0.000 description 10
- VCMMXZQDRFWYSE-UHFFFAOYSA-N plumbagin Chemical compound C1=CC=C2C(=O)C(C)=CC(=O)C2=C1O VCMMXZQDRFWYSE-UHFFFAOYSA-N 0.000 description 10
- 239000000758 substrate Substances 0.000 description 10
- 239000006228 supernatant Substances 0.000 description 10
- 239000003053 toxin Substances 0.000 description 10
- 231100000765 toxin Toxicity 0.000 description 10
- 108700012359 toxins Proteins 0.000 description 10
- YXFVVABEGXRONW-UHFFFAOYSA-N Toluene Chemical compound CC1=CC=CC=C1 YXFVVABEGXRONW-UHFFFAOYSA-N 0.000 description 9
- 230000002759 chromosomal effect Effects 0.000 description 9
- 238000010276 construction Methods 0.000 description 9
- 238000005259 measurement Methods 0.000 description 9
- 239000012528 membrane Substances 0.000 description 9
- YHQDZJICGQWFHK-UHFFFAOYSA-N 4-nitroquinoline N-oxide Chemical compound C1=CC=C2C([N+](=O)[O-])=CC=[N+]([O-])C2=C1 YHQDZJICGQWFHK-UHFFFAOYSA-N 0.000 description 8
- CIWBSHSKHKDKBQ-JLAZNSOCSA-N Ascorbic acid Chemical compound OC[C@H](O)[C@H]1OC(=O)C(O)=C1O CIWBSHSKHKDKBQ-JLAZNSOCSA-N 0.000 description 8
- NWIBSHFKIJFRCO-WUDYKRTCSA-N Mytomycin Chemical compound C1N2C(C(C(C)=C(N)C3=O)=O)=C3[C@@H](COC(N)=O)[C@@]2(OC)[C@@H]2[C@H]1N2 NWIBSHFKIJFRCO-WUDYKRTCSA-N 0.000 description 8
- ISWSIDIOOBJBQZ-UHFFFAOYSA-N Phenol Chemical compound OC1=CC=CC=C1 ISWSIDIOOBJBQZ-UHFFFAOYSA-N 0.000 description 8
- 230000001939 inductive effect Effects 0.000 description 8
- 239000006166 lysate Substances 0.000 description 8
- 239000000203 mixture Substances 0.000 description 8
- 239000002773 nucleotide Substances 0.000 description 8
- 230000005778 DNA damage Effects 0.000 description 7
- 231100000277 DNA damage Toxicity 0.000 description 7
- 101100062109 Desulfuromonas acetoxidans cyd gene Proteins 0.000 description 7
- 239000004098 Tetracycline Substances 0.000 description 7
- QVGXLLKOCUKJST-UHFFFAOYSA-N atomic oxygen Chemical compound [O] QVGXLLKOCUKJST-UHFFFAOYSA-N 0.000 description 7
- 238000010367 cloning Methods 0.000 description 7
- 238000002405 diagnostic procedure Methods 0.000 description 7
- 239000012634 fragment Substances 0.000 description 7
- 239000001301 oxygen Substances 0.000 description 7
- 229910052760 oxygen Inorganic materials 0.000 description 7
- 230000035939 shock Effects 0.000 description 7
- 239000011780 sodium chloride Substances 0.000 description 7
- 229960002180 tetracycline Drugs 0.000 description 7
- 229930101283 tetracycline Natural products 0.000 description 7
- 235000019364 tetracycline Nutrition 0.000 description 7
- 150000003522 tetracyclines Chemical class 0.000 description 7
- 241000894006 Bacteria Species 0.000 description 6
- 230000006820 DNA synthesis Effects 0.000 description 6
- XEEYBQQBJWHFJM-UHFFFAOYSA-N Iron Chemical compound [Fe] XEEYBQQBJWHFJM-UHFFFAOYSA-N 0.000 description 6
- 241000700159 Rattus Species 0.000 description 6
- 230000029936 alkylation Effects 0.000 description 6
- 230000003115 biocidal effect Effects 0.000 description 6
- 231100000357 carcinogen Toxicity 0.000 description 6
- 239000003183 carcinogenic agent Substances 0.000 description 6
- 230000010261 cell growth Effects 0.000 description 6
- 230000000875 corresponding effect Effects 0.000 description 6
- 235000014113 dietary fatty acids Nutrition 0.000 description 6
- 238000002474 experimental method Methods 0.000 description 6
- 239000000194 fatty acid Substances 0.000 description 6
- 229930195729 fatty acid Natural products 0.000 description 6
- 150000004665 fatty acids Chemical class 0.000 description 6
- RWSXRVCMGQZWBV-WDSKDSINSA-N glutathione Chemical compound OC(=O)[C@@H](N)CCC(=O)N[C@@H](CS)C(=O)NCC(O)=O RWSXRVCMGQZWBV-WDSKDSINSA-N 0.000 description 6
- QSHDDOUJBYECFT-UHFFFAOYSA-N mercury Chemical compound [Hg] QSHDDOUJBYECFT-UHFFFAOYSA-N 0.000 description 6
- 229960004857 mitomycin Drugs 0.000 description 6
- 101150072263 mutT gene Proteins 0.000 description 6
- 230000035772 mutation Effects 0.000 description 6
- 125000003729 nucleotide group Chemical group 0.000 description 6
- 230000003647 oxidation Effects 0.000 description 6
- 238000007254 oxidation reaction Methods 0.000 description 6
- RXWNCPJZOCPEPQ-NVWDDTSBSA-N puromycin Chemical compound C1=CC(OC)=CC=C1C[C@H](N)C(=O)N[C@H]1[C@@H](O)[C@H](N2C3=NC=NC(=C3N=C2)N(C)C)O[C@@H]1CO RXWNCPJZOCPEPQ-NVWDDTSBSA-N 0.000 description 6
- 230000004044 response Effects 0.000 description 6
- 238000012031 short term test Methods 0.000 description 6
- XLYOFNOQVPJJNP-UHFFFAOYSA-N water Chemical compound O XLYOFNOQVPJJNP-UHFFFAOYSA-N 0.000 description 6
- 102000011724 DNA Repair Enzymes Human genes 0.000 description 5
- ZMOIGGHUSNHCAB-UHFFFAOYSA-N Isoplumbagin Natural products C1=CC(O)=C2C(=O)C(C)=CC(=O)C2=C1 ZMOIGGHUSNHCAB-UHFFFAOYSA-N 0.000 description 5
- 108091034117 Oligonucleotide Proteins 0.000 description 5
- 101150098704 SDH gene Proteins 0.000 description 5
- 241000293869 Salmonella enterica subsp. enterica serovar Typhimurium Species 0.000 description 5
- VMHLLURERBWHNL-UHFFFAOYSA-M Sodium acetate Chemical compound [Na+].CC([O-])=O VMHLLURERBWHNL-UHFFFAOYSA-M 0.000 description 5
- JLCPHMBAVCMARE-UHFFFAOYSA-N [3-[[3-[[3-[[3-[[3-[[3-[[3-[[3-[[3-[[3-[[3-[[5-(2-amino-6-oxo-1H-purin-9-yl)-3-[[3-[[3-[[3-[[3-[[3-[[5-(2-amino-6-oxo-1H-purin-9-yl)-3-[[5-(2-amino-6-oxo-1H-purin-9-yl)-3-hydroxyoxolan-2-yl]methoxy-hydroxyphosphoryl]oxyoxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(5-methyl-2,4-dioxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxyoxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(5-methyl-2,4-dioxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(4-amino-2-oxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(5-methyl-2,4-dioxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(5-methyl-2,4-dioxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(4-amino-2-oxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(4-amino-2-oxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(4-amino-2-oxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(4-amino-2-oxopyrimidin-1-yl)oxolan-2-yl]methyl [5-(6-aminopurin-9-yl)-2-(hydroxymethyl)oxolan-3-yl] hydrogen phosphate Polymers Cc1cn(C2CC(OP(O)(=O)OCC3OC(CC3OP(O)(=O)OCC3OC(CC3O)n3cnc4c3nc(N)[nH]c4=O)n3cnc4c3nc(N)[nH]c4=O)C(COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3CO)n3cnc4c(N)ncnc34)n3ccc(N)nc3=O)n3cnc4c(N)ncnc34)n3ccc(N)nc3=O)n3ccc(N)nc3=O)n3ccc(N)nc3=O)n3cnc4c(N)ncnc34)n3cnc4c(N)ncnc34)n3cc(C)c(=O)[nH]c3=O)n3cc(C)c(=O)[nH]c3=O)n3ccc(N)nc3=O)n3cc(C)c(=O)[nH]c3=O)n3cnc4c3nc(N)[nH]c4=O)n3cnc4c(N)ncnc34)n3cnc4c(N)ncnc34)n3cnc4c(N)ncnc34)n3cnc4c(N)ncnc34)O2)c(=O)[nH]c1=O JLCPHMBAVCMARE-UHFFFAOYSA-N 0.000 description 5
- 238000002835 absorbance Methods 0.000 description 5
- 238000005804 alkylation reaction Methods 0.000 description 5
- ALPCEXCHMFUSAN-UHFFFAOYSA-N beta-Dihydroplumbagin Natural products C1=CC=C2C(=O)C(C)CC(=O)C2=C1O ALPCEXCHMFUSAN-UHFFFAOYSA-N 0.000 description 5
- 210000000170 cell membrane Anatomy 0.000 description 5
- 239000013611 chromosomal DNA Substances 0.000 description 5
- 230000006870 function Effects 0.000 description 5
- 239000000411 inducer Substances 0.000 description 5
- 230000003834 intracellular effect Effects 0.000 description 5
- 230000003859 lipid peroxidation Effects 0.000 description 5
- 229910052753 mercury Inorganic materials 0.000 description 5
- 239000002547 new drug Substances 0.000 description 5
- 239000008188 pellet Substances 0.000 description 5
- 230000001105 regulatory effect Effects 0.000 description 5
- 239000001632 sodium acetate Substances 0.000 description 5
- 235000017281 sodium acetate Nutrition 0.000 description 5
- 238000013519 translation Methods 0.000 description 5
- 230000014616 translation Effects 0.000 description 5
- 230000032258 transport Effects 0.000 description 5
- 238000011144 upstream manufacturing Methods 0.000 description 5
- 229910001868 water Inorganic materials 0.000 description 5
- 231100000039 Ames test Toxicity 0.000 description 4
- ROFVEXUMMXZLPA-UHFFFAOYSA-N Bipyridyl Chemical group N1=CC=CC=C1C1=CC=CC=N1 ROFVEXUMMXZLPA-UHFFFAOYSA-N 0.000 description 4
- 102000053602 DNA Human genes 0.000 description 4
- 108010076525 DNA Repair Enzymes Proteins 0.000 description 4
- 230000004543 DNA replication Effects 0.000 description 4
- 231100001074 DNA strand break Toxicity 0.000 description 4
- 230000005526 G1 to G0 transition Effects 0.000 description 4
- MJVAVZPDRWSRRC-UHFFFAOYSA-N Menadione Chemical compound C1=CC=C2C(=O)C(C)=CC(=O)C2=C1 MJVAVZPDRWSRRC-UHFFFAOYSA-N 0.000 description 4
- 229930192392 Mitomycin Natural products 0.000 description 4
- HDFGOPSGAURCEO-UHFFFAOYSA-N N-ethylmaleimide Chemical compound CCN1C(=O)C=CC1=O HDFGOPSGAURCEO-UHFFFAOYSA-N 0.000 description 4
- MWUXSHHQAYIFBG-UHFFFAOYSA-N Nitric oxide Chemical compound O=[N] MWUXSHHQAYIFBG-UHFFFAOYSA-N 0.000 description 4
- 229960005070 ascorbic acid Drugs 0.000 description 4
- 235000010323 ascorbic acid Nutrition 0.000 description 4
- 239000011668 ascorbic acid Substances 0.000 description 4
- 230000005779 cell damage Effects 0.000 description 4
- 230000001413 cellular effect Effects 0.000 description 4
- 230000008859 change Effects 0.000 description 4
- 238000003776 cleavage reaction Methods 0.000 description 4
- 230000001419 dependent effect Effects 0.000 description 4
- 238000004520 electroporation Methods 0.000 description 4
- 239000001963 growth medium Substances 0.000 description 4
- 101150055715 hag gene Proteins 0.000 description 4
- 230000005764 inhibitory process Effects 0.000 description 4
- 238000004519 manufacturing process Methods 0.000 description 4
- 229910052751 metal Inorganic materials 0.000 description 4
- 239000002184 metal Substances 0.000 description 4
- 102000039446 nucleic acids Human genes 0.000 description 4
- 108020004707 nucleic acids Proteins 0.000 description 4
- 150000007523 nucleic acids Chemical class 0.000 description 4
- 230000003204 osmotic effect Effects 0.000 description 4
- 108090000765 processed proteins & peptides Proteins 0.000 description 4
- 230000010076 replication Effects 0.000 description 4
- 230000007017 scission Effects 0.000 description 4
- 239000011734 sodium Substances 0.000 description 4
- 230000001629 suppression Effects 0.000 description 4
- 231100000820 toxicity test Toxicity 0.000 description 4
- 238000010361 transduction Methods 0.000 description 4
- 230000026683 transduction Effects 0.000 description 4
- 238000011282 treatment Methods 0.000 description 4
- 241001515965 unidentified phage Species 0.000 description 4
- HGUFODBRKLSHSI-UHFFFAOYSA-N 2,3,7,8-tetrachloro-dibenzo-p-dioxin Chemical compound O1C2=CC(Cl)=C(Cl)C=C2OC2=C1C=C(Cl)C(Cl)=C2 HGUFODBRKLSHSI-UHFFFAOYSA-N 0.000 description 3
- 102000002260 Alkaline Phosphatase Human genes 0.000 description 3
- 108020004774 Alkaline Phosphatase Proteins 0.000 description 3
- 108091029792 Alkylated DNA Proteins 0.000 description 3
- 241000282472 Canis lupus familiaris Species 0.000 description 3
- 108010053835 Catalase Proteins 0.000 description 3
- 108010017826 DNA Polymerase I Proteins 0.000 description 3
- 102000004594 DNA Polymerase I Human genes 0.000 description 3
- 101100137785 Escherichia coli (strain K12) proX gene Proteins 0.000 description 3
- 241000702189 Escherichia virus Mu Species 0.000 description 3
- WQZGKKKJIJFFOK-GASJEMHNSA-N Glucose Natural products OC[C@H]1OC(O)[C@H](O)[C@@H](O)[C@@H]1O WQZGKKKJIJFFOK-GASJEMHNSA-N 0.000 description 3
- 108010024636 Glutathione Proteins 0.000 description 3
- JJWSNOOGIUMOEE-UHFFFAOYSA-N Monomethylmercury Chemical compound [Hg]C JJWSNOOGIUMOEE-UHFFFAOYSA-N 0.000 description 3
- GHAZCVNUKKZTLG-UHFFFAOYSA-N N-ethyl-succinimide Natural products CCN1C(=O)CCC1=O GHAZCVNUKKZTLG-UHFFFAOYSA-N 0.000 description 3
- 108091081024 Start codon Proteins 0.000 description 3
- 238000005273 aeration Methods 0.000 description 3
- 239000000729 antidote Substances 0.000 description 3
- 230000000711 cancerogenic effect Effects 0.000 description 3
- 238000012512 characterization method Methods 0.000 description 3
- 210000000349 chromosome Anatomy 0.000 description 3
- 230000000295 complement effect Effects 0.000 description 3
- 239000003431 cross linking reagent Substances 0.000 description 3
- 230000003247 decreasing effect Effects 0.000 description 3
- 101150041755 fepB gene Proteins 0.000 description 3
- 239000008103 glucose Substances 0.000 description 3
- 229960003180 glutathione Drugs 0.000 description 3
- 229910001385 heavy metal Inorganic materials 0.000 description 3
- 150000002432 hydroperoxides Chemical class 0.000 description 3
- 238000012966 insertion method Methods 0.000 description 3
- 239000002555 ionophore Substances 0.000 description 3
- 230000000236 ionophoric effect Effects 0.000 description 3
- 229910052742 iron Inorganic materials 0.000 description 3
- 210000004185 liver Anatomy 0.000 description 3
- 238000010369 molecular cloning Methods 0.000 description 3
- 229960000210 nalidixic acid Drugs 0.000 description 3
- MHWLWQUZZRMNGJ-UHFFFAOYSA-N nalidixic acid Chemical compound C1=C(C)N=C2N(CC)C=C(C(O)=O)C(=O)C2=C1 MHWLWQUZZRMNGJ-UHFFFAOYSA-N 0.000 description 3
- 230000008789 oxidative DNA damage Effects 0.000 description 3
- 238000005502 peroxidation Methods 0.000 description 3
- 150000007965 phenolic acids Chemical class 0.000 description 3
- 229920001184 polypeptide Polymers 0.000 description 3
- 238000002360 preparation method Methods 0.000 description 3
- 102000004196 processed proteins & peptides Human genes 0.000 description 3
- 229950010131 puromycin Drugs 0.000 description 3
- 230000006798 recombination Effects 0.000 description 3
- 238000005215 recombination Methods 0.000 description 3
- 238000013518 transcription Methods 0.000 description 3
- 230000035897 transcription Effects 0.000 description 3
- 239000012137 tryptone Substances 0.000 description 3
- OWEGMIWEEQEYGQ-UHFFFAOYSA-N 100676-05-9 Natural products OC1C(O)C(O)C(CO)OC1OCC1C(O)C(O)C(O)C(OC2C(OC(O)C(O)C2O)CO)O1 OWEGMIWEEQEYGQ-UHFFFAOYSA-N 0.000 description 2
- UFBJCMHMOXMLKC-UHFFFAOYSA-N 2,4-dinitrophenol Chemical compound OC1=CC=C([N+]([O-])=O)C=C1[N+]([O-])=O UFBJCMHMOXMLKC-UHFFFAOYSA-N 0.000 description 2
- BUZOGVVQWCXXDP-VPENINKCSA-N 8-oxo-dGTP Chemical compound O=C1NC=2C(=O)NC(N)=NC=2N1[C@H]1C[C@H](O)[C@@H](COP(O)(=O)OP(O)(=O)OP(O)(O)=O)O1 BUZOGVVQWCXXDP-VPENINKCSA-N 0.000 description 2
- 101100273316 Acinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1) catF gene Proteins 0.000 description 2
- 108020000946 Bacterial DNA Proteins 0.000 description 2
- UXVMQQNJUSDDNG-UHFFFAOYSA-L Calcium chloride Chemical compound [Cl-].[Cl-].[Ca+2] UXVMQQNJUSDDNG-UHFFFAOYSA-L 0.000 description 2
- UGTJLJZQQFGTJD-UHFFFAOYSA-N Carbonylcyanide-3-chlorophenylhydrazone Chemical compound ClC1=CC=CC(NN=C(C#N)C#N)=C1 UGTJLJZQQFGTJD-UHFFFAOYSA-N 0.000 description 2
- 102100035882 Catalase Human genes 0.000 description 2
- 108091026890 Coding region Proteins 0.000 description 2
- 230000007118 DNA alkylation Effects 0.000 description 2
- 230000000970 DNA cross-linking effect Effects 0.000 description 2
- 206010059866 Drug resistance Diseases 0.000 description 2
- 238000012286 ELISA Assay Methods 0.000 description 2
- PLUBXMRUUVWRLT-UHFFFAOYSA-N Ethyl methanesulfonate Chemical compound CCOS(C)(=O)=O PLUBXMRUUVWRLT-UHFFFAOYSA-N 0.000 description 2
- 108010057366 Flavodoxin Proteins 0.000 description 2
- 101000836620 Homo sapiens Nucleic acid dioxygenase ALKBH1 Proteins 0.000 description 2
- GUBGYTABKSRVRQ-PICCSMPSSA-N Maltose Natural products O[C@@H]1[C@@H](O)[C@H](O)[C@@H](CO)O[C@@H]1O[C@@H]1[C@@H](CO)OC(O)[C@H](O)[C@H]1O GUBGYTABKSRVRQ-PICCSMPSSA-N 0.000 description 2
- 241000124008 Mammalia Species 0.000 description 2
- VZUNGTLZRAYYDE-UHFFFAOYSA-N N-methyl-N'-nitro-N-nitrosoguanidine Chemical compound O=NN(C)C(=N)N[N+]([O-])=O VZUNGTLZRAYYDE-UHFFFAOYSA-N 0.000 description 2
- 125000001429 N-terminal alpha-amino-acid group Chemical group 0.000 description 2
- 206010028980 Neoplasm Diseases 0.000 description 2
- 102000004316 Oxidoreductases Human genes 0.000 description 2
- 108090000854 Oxidoreductases Proteins 0.000 description 2
- 101100296558 Pseudomonas knackmussii (strain DSM 6978 / LMG 23759 / B13) pcaF gene Proteins 0.000 description 2
- 101100494806 Pseudomonas syringae pv. syringae katB gene Proteins 0.000 description 2
- 108020004511 Recombinant DNA Proteins 0.000 description 2
- 240000004808 Saccharomyces cerevisiae Species 0.000 description 2
- 102000019197 Superoxide Dismutase Human genes 0.000 description 2
- 108010012715 Superoxide dismutase Proteins 0.000 description 2
- DPKHZNPWBDQZCN-UHFFFAOYSA-N acridine orange free base Chemical compound C1=CC(N(C)C)=CC2=NC3=CC(N(C)C)=CC=C3C=C21 DPKHZNPWBDQZCN-UHFFFAOYSA-N 0.000 description 2
- 239000013543 active substance Substances 0.000 description 2
- 230000001154 acute effect Effects 0.000 description 2
- 101150083380 adaA gene Proteins 0.000 description 2
- 239000002168 alkylating agent Substances 0.000 description 2
- 229940100198 alkylating agent Drugs 0.000 description 2
- 150000001413 amino acids Chemical class 0.000 description 2
- 239000003242 anti bacterial agent Substances 0.000 description 2
- DZBUGLKDJFMEHC-UHFFFAOYSA-N benzoquinolinylidene Natural products C1=CC=CC2=CC3=CC=CC=C3N=C21 DZBUGLKDJFMEHC-UHFFFAOYSA-N 0.000 description 2
- 238000004364 calculation method Methods 0.000 description 2
- 201000011510 cancer Diseases 0.000 description 2
- 229940041514 candida albicans extract Drugs 0.000 description 2
- 230000030833 cell death Effects 0.000 description 2
- 230000009087 cell motility Effects 0.000 description 2
- 239000002738 chelating agent Substances 0.000 description 2
- 239000003153 chemical reaction reagent Substances 0.000 description 2
- 239000003638 chemical reducing agent Substances 0.000 description 2
- 229960005091 chloramphenicol Drugs 0.000 description 2
- WIIZWVCIJKGZOK-RKDXNWHRSA-N chloramphenicol Chemical compound ClC(Cl)C(=O)N[C@H](CO)[C@H](O)C1=CC=C([N+]([O-])=O)C=C1 WIIZWVCIJKGZOK-RKDXNWHRSA-N 0.000 description 2
- 239000013068 control sample Substances 0.000 description 2
- 238000004132 cross linking Methods 0.000 description 2
- 238000001514 detection method Methods 0.000 description 2
- 231100000673 dose–response relationship Toxicity 0.000 description 2
- 230000001909 effect on DNA Effects 0.000 description 2
- 230000002255 enzymatic effect Effects 0.000 description 2
- 230000001747 exhibiting effect Effects 0.000 description 2
- 101150015067 fabB gene Proteins 0.000 description 2
- 239000012737 fresh medium Substances 0.000 description 2
- 230000002068 genetic effect Effects 0.000 description 2
- 101150070420 gyrA gene Proteins 0.000 description 2
- 238000010438 heat treatment Methods 0.000 description 2
- 239000001257 hydrogen Substances 0.000 description 2
- 229910052739 hydrogen Inorganic materials 0.000 description 2
- 125000004435 hydrogen atom Chemical class [H]* 0.000 description 2
- 125000002883 imidazolyl group Chemical group 0.000 description 2
- 208000015181 infectious disease Diseases 0.000 description 2
- 239000000138 intercalating agent Substances 0.000 description 2
- 238000002955 isolation Methods 0.000 description 2
- 101150001899 lacY gene Proteins 0.000 description 2
- 150000002632 lipids Chemical class 0.000 description 2
- 230000007774 longterm Effects 0.000 description 2
- 210000004962 mammalian cell Anatomy 0.000 description 2
- 101150004478 merR gene Proteins 0.000 description 2
- 229960002523 mercuric chloride Drugs 0.000 description 2
- 150000002731 mercury compounds Chemical class 0.000 description 2
- LWJROJCJINYWOX-UHFFFAOYSA-L mercury dichloride Chemical compound Cl[Hg]Cl LWJROJCJINYWOX-UHFFFAOYSA-L 0.000 description 2
- 231100001223 noncarcinogenic Toxicity 0.000 description 2
- 150000007524 organic acids Chemical class 0.000 description 2
- 230000008723 osmotic stress Effects 0.000 description 2
- 230000004792 oxidative damage Effects 0.000 description 2
- 230000036542 oxidative stress Effects 0.000 description 2
- 231100000683 possible toxicity Toxicity 0.000 description 2
- 230000008439 repair process Effects 0.000 description 2
- 230000029058 respiratory gaseous exchange Effects 0.000 description 2
- 230000003938 response to stress Effects 0.000 description 2
- 108091008146 restriction endonucleases Proteins 0.000 description 2
- 150000003839 salts Chemical class 0.000 description 2
- 238000012216 screening Methods 0.000 description 2
- 238000012163 sequencing technique Methods 0.000 description 2
- 239000000243 solution Substances 0.000 description 2
- PVYJZLYGTZKPJE-UHFFFAOYSA-N streptonigrin Chemical compound C=1C=C2C(=O)C(OC)=C(N)C(=O)C2=NC=1C(C=1N)=NC(C(O)=O)=C(C)C=1C1=CC=C(OC)C(OC)=C1O PVYJZLYGTZKPJE-UHFFFAOYSA-N 0.000 description 2
- CIHOLLKRGTVIJN-UHFFFAOYSA-N tert‐butyl hydroperoxide Chemical compound CC(C)(C)OO CIHOLLKRGTVIJN-UHFFFAOYSA-N 0.000 description 2
- JZRWCGZRTZMZEH-UHFFFAOYSA-N thiamine Chemical compound CC1=C(CCO)SC=[N+]1CC1=CN=C(C)N=C1N JZRWCGZRTZMZEH-UHFFFAOYSA-N 0.000 description 2
- 125000003396 thiol group Chemical group [H]S* 0.000 description 2
- 150000003573 thiols Chemical class 0.000 description 2
- 231100000027 toxicology Toxicity 0.000 description 2
- 239000001226 triphosphate Substances 0.000 description 2
- 235000011178 triphosphate Nutrition 0.000 description 2
- 235000012711 vitamin K3 Nutrition 0.000 description 2
- 239000011652 vitamin K3 Substances 0.000 description 2
- 229940041603 vitamin k 3 Drugs 0.000 description 2
- 239000012138 yeast extract Substances 0.000 description 2
- OYHQOLUKZRVURQ-NTGFUMLPSA-N (9Z,12Z)-9,10,12,13-tetratritiooctadeca-9,12-dienoic acid Chemical compound C(CCCCCCC\C(=C(/C\C(=C(/CCCCC)\[3H])\[3H])\[3H])\[3H])(=O)O OYHQOLUKZRVURQ-NTGFUMLPSA-N 0.000 description 1
- BGGXFWKAGMTQIO-UHFFFAOYSA-N 2-nitro-1-oxidoquinolin-1-ium Chemical compound C1=CC=CC2=[N+]([O-])C([N+](=O)[O-])=CC=C21 BGGXFWKAGMTQIO-UHFFFAOYSA-N 0.000 description 1
- FRIBMENBGGCKPD-UHFFFAOYSA-N 3-(2,3-dimethoxyphenyl)prop-2-enal Chemical compound COC1=CC=CC(C=CC=O)=C1OC FRIBMENBGGCKPD-UHFFFAOYSA-N 0.000 description 1
- FWMNVWWHGCHHJJ-SKKKGAJSSA-N 4-amino-1-[(2r)-6-amino-2-[[(2r)-2-[[(2r)-2-[[(2r)-2-amino-3-phenylpropanoyl]amino]-3-phenylpropanoyl]amino]-4-methylpentanoyl]amino]hexanoyl]piperidine-4-carboxylic acid Chemical compound C([C@H](C(=O)N[C@H](CC(C)C)C(=O)N[C@H](CCCCN)C(=O)N1CCC(N)(CC1)C(O)=O)NC(=O)[C@H](N)CC=1C=CC=CC=1)C1=CC=CC=C1 FWMNVWWHGCHHJJ-SKKKGAJSSA-N 0.000 description 1
- IFBHRQDFSNCLOZ-IIRVCBMXSA-N 4-nitrophenyl-α-d-galactoside Chemical compound O[C@@H]1[C@@H](O)[C@@H](O)[C@@H](CO)O[C@@H]1OC1=CC=C([N+]([O-])=O)C=C1 IFBHRQDFSNCLOZ-IIRVCBMXSA-N 0.000 description 1
- ZPVSFHWMXABGPU-UHFFFAOYSA-N 4-nitroquinoline Chemical compound C1=CC=C2C([N+](=O)[O-])=CC=NC2=C1 ZPVSFHWMXABGPU-UHFFFAOYSA-N 0.000 description 1
- RXGJTUSBYWCRBK-UHFFFAOYSA-M 5-methylphenazinium methyl sulfate Chemical compound COS([O-])(=O)=O.C1=CC=C2[N+](C)=C(C=CC=C3)C3=NC2=C1 RXGJTUSBYWCRBK-UHFFFAOYSA-M 0.000 description 1
- 102000007566 ATP-Dependent Proteases Human genes 0.000 description 1
- 108010071550 ATP-Dependent Proteases Proteins 0.000 description 1
- 108091006112 ATPases Proteins 0.000 description 1
- 102000057290 Adenosine Triphosphatases Human genes 0.000 description 1
- 101100417113 African swine fever virus (isolate Tick/Malawi/Lil 20-1/1983) Mal-103 gene Proteins 0.000 description 1
- NLXLAEXVIDQMFP-UHFFFAOYSA-N Ammonia chloride Chemical compound [NH4+].[Cl-] NLXLAEXVIDQMFP-UHFFFAOYSA-N 0.000 description 1
- 108020005544 Antisense RNA Proteins 0.000 description 1
- 108010006654 Bleomycin Proteins 0.000 description 1
- OWNRRUFOJXFKCU-UHFFFAOYSA-N Bromadiolone Chemical compound C=1C=C(C=2C=CC(Br)=CC=2)C=CC=1C(O)CC(C=1C(OC2=CC=CC=C2C=1O)=O)C1=CC=CC=C1 OWNRRUFOJXFKCU-UHFFFAOYSA-N 0.000 description 1
- 206010007269 Carcinogenicity Diseases 0.000 description 1
- 102000016938 Catalase Human genes 0.000 description 1
- 241000700199 Cavia porcellus Species 0.000 description 1
- 241000282693 Cercopithecidae Species 0.000 description 1
- 101100499417 Chlamydia pneumoniae dnaA1 gene Proteins 0.000 description 1
- 108010035563 Chloramphenicol O-acetyltransferase Proteins 0.000 description 1
- KRKNYBCHXYNGOX-UHFFFAOYSA-K Citrate Chemical compound [O-]C(=O)CC(O)(CC([O-])=O)C([O-])=O KRKNYBCHXYNGOX-UHFFFAOYSA-K 0.000 description 1
- PMPVIKIVABFJJI-UHFFFAOYSA-N Cyclobutane Chemical class C1CCC1 PMPVIKIVABFJJI-UHFFFAOYSA-N 0.000 description 1
- 108050008072 Cytochrome c oxidase subunit IV Proteins 0.000 description 1
- 102000018832 Cytochromes Human genes 0.000 description 1
- 108010052832 Cytochromes Proteins 0.000 description 1
- 239000012624 DNA alkylating agent Substances 0.000 description 1
- 230000033616 DNA repair Effects 0.000 description 1
- 108090000626 DNA-directed RNA polymerases Proteins 0.000 description 1
- 102000004163 DNA-directed RNA polymerases Human genes 0.000 description 1
- 101100425816 Dictyostelium discoideum top2mt gene Proteins 0.000 description 1
- 208000030453 Drug-Related Side Effects and Adverse reaction Diseases 0.000 description 1
- 238000002965 ELISA Methods 0.000 description 1
- 102100031780 Endonuclease Human genes 0.000 description 1
- 108010042407 Endonucleases Proteins 0.000 description 1
- 241000701959 Escherichia virus Lambda Species 0.000 description 1
- 241000206602 Eukaryota Species 0.000 description 1
- 108060002716 Exonuclease Proteins 0.000 description 1
- 108010074122 Ferredoxins Proteins 0.000 description 1
- 102100037777 Galactokinase Human genes 0.000 description 1
- 102000002464 Galactosidases Human genes 0.000 description 1
- 108010093031 Galactosidases Proteins 0.000 description 1
- 108700039691 Genetic Promoter Regions Proteins 0.000 description 1
- 108010036164 Glutathione synthase Proteins 0.000 description 1
- 102100034294 Glutathione synthetase Human genes 0.000 description 1
- 102000005720 Glutathione transferase Human genes 0.000 description 1
- 108010070675 Glutathione transferase Proteins 0.000 description 1
- AEMRFAOFKBGASW-UHFFFAOYSA-N Glycolic acid Chemical class OCC(O)=O AEMRFAOFKBGASW-UHFFFAOYSA-N 0.000 description 1
- 108010025076 Holoenzymes Proteins 0.000 description 1
- 102000004195 Isomerases Human genes 0.000 description 1
- 108090000769 Isomerases Proteins 0.000 description 1
- FSBIGDSBMBYOPN-VKHMYHEASA-N L-canavanine Chemical compound OC(=O)[C@@H](N)CCONC(N)=N FSBIGDSBMBYOPN-VKHMYHEASA-N 0.000 description 1
- ROHFNLRQFUQHCH-YFKPBYRVSA-N L-leucine Chemical compound CC(C)C[C@H](N)C(O)=O ROHFNLRQFUQHCH-YFKPBYRVSA-N 0.000 description 1
- FFEARJCKVFRZRR-BYPYZUCNSA-N L-methionine Chemical compound CSCC[C@H](N)C(O)=O FFEARJCKVFRZRR-BYPYZUCNSA-N 0.000 description 1
- ROHFNLRQFUQHCH-UHFFFAOYSA-N Leucine Natural products CC(C)CC(N)C(O)=O ROHFNLRQFUQHCH-UHFFFAOYSA-N 0.000 description 1
- 108090000364 Ligases Proteins 0.000 description 1
- 108060001084 Luciferase Proteins 0.000 description 1
- 239000005089 Luciferase Substances 0.000 description 1
- 102000003939 Membrane transport proteins Human genes 0.000 description 1
- 108090000301 Membrane transport proteins Proteins 0.000 description 1
- 108060004795 Methyltransferase Proteins 0.000 description 1
- 102000016943 Muramidase Human genes 0.000 description 1
- 108010014251 Muramidase Proteins 0.000 description 1
- 108010062010 N-Acetylmuramoyl-L-alanine Amidase Proteins 0.000 description 1
- 238000000636 Northern blotting Methods 0.000 description 1
- 101100278084 Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) dnaK1 gene Proteins 0.000 description 1
- 101710163270 Nuclease Proteins 0.000 description 1
- 102100027051 Nucleic acid dioxygenase ALKBH1 Human genes 0.000 description 1
- FSBIGDSBMBYOPN-UHFFFAOYSA-N O-guanidino-DL-homoserine Natural products OC(=O)C(N)CCON=C(N)N FSBIGDSBMBYOPN-UHFFFAOYSA-N 0.000 description 1
- 108700026244 Open Reading Frames Proteins 0.000 description 1
- 238000012408 PCR amplification Methods 0.000 description 1
- 108091005804 Peptidases Proteins 0.000 description 1
- 108010090127 Periplasmic Proteins Proteins 0.000 description 1
- 239000004743 Polypropylene Substances 0.000 description 1
- ZLMJMSJWJFRBEC-UHFFFAOYSA-N Potassium Chemical compound [K] ZLMJMSJWJFRBEC-UHFFFAOYSA-N 0.000 description 1
- 239000004365 Protease Substances 0.000 description 1
- LCTONWCANYUPML-UHFFFAOYSA-M Pyruvate Chemical compound CC(=O)C([O-])=O LCTONWCANYUPML-UHFFFAOYSA-M 0.000 description 1
- 102100037486 Reverse transcriptase/ribonuclease H Human genes 0.000 description 1
- 108010041388 Ribonucleotide Reductases Proteins 0.000 description 1
- 102000000505 Ribonucleotide Reductases Human genes 0.000 description 1
- 241000607142 Salmonella Species 0.000 description 1
- 108010063499 Sigma Factor Proteins 0.000 description 1
- 108020004682 Single-Stranded DNA Proteins 0.000 description 1
- 102000019259 Succinate Dehydrogenase Human genes 0.000 description 1
- 108010012901 Succinate Dehydrogenase Proteins 0.000 description 1
- 101100117145 Synechocystis sp. (strain PCC 6803 / Kazusa) dnaK2 gene Proteins 0.000 description 1
- 108010006785 Taq Polymerase Proteins 0.000 description 1
- 101710183280 Topoisomerase Proteins 0.000 description 1
- 206010070863 Toxicity to various agents Diseases 0.000 description 1
- 101001066237 Treponema pallidum (strain Nichols) Putative galactokinase Proteins 0.000 description 1
- 208000027418 Wounds and injury Diseases 0.000 description 1
- WTIJXIZOODAMJT-WBACWINTSA-N [(3r,4s,5r,6s)-5-hydroxy-6-[4-hydroxy-3-[[5-[[4-hydroxy-7-[(2s,3r,4s,5r)-3-hydroxy-5-methoxy-6,6-dimethyl-4-(5-methyl-1h-pyrrole-2-carbonyl)oxyoxan-2-yl]oxy-8-methyl-2-oxochromen-3-yl]carbamoyl]-4-methyl-1h-pyrrole-3-carbonyl]amino]-8-methyl-2-oxochromen- Chemical compound O([C@@H]1[C@H](C(O[C@H](OC=2C(=C3OC(=O)C(NC(=O)C=4C(=C(C(=O)NC=5C(OC6=C(C)C(O[C@@H]7[C@@H]([C@H](OC(=O)C=8NC(C)=CC=8)[C@@H](OC)C(C)(C)O7)O)=CC=C6C=5O)=O)NC=4)C)=C(O)C3=CC=2)C)[C@@H]1O)(C)C)OC)C(=O)C1=CC=C(C)N1 WTIJXIZOODAMJT-WBACWINTSA-N 0.000 description 1
- XJLXINKUBYWONI-DQQFMEOOSA-N [[(2r,3r,4r,5r)-5-(6-aminopurin-9-yl)-3-hydroxy-4-phosphonooxyoxolan-2-yl]methoxy-hydroxyphosphoryl] [(2s,3r,4s,5s)-5-(3-carbamoylpyridin-1-ium-1-yl)-3,4-dihydroxyoxolan-2-yl]methyl phosphate Chemical compound NC(=O)C1=CC=C[N+]([C@@H]2[C@H]([C@@H](O)[C@H](COP([O-])(=O)OP(O)(=O)OC[C@@H]3[C@H]([C@@H](OP(O)(O)=O)[C@@H](O3)N3C4=NC=NC(N)=C4N=C3)O)O2)O)=C1 XJLXINKUBYWONI-DQQFMEOOSA-N 0.000 description 1
- JCHLKIQZUXYLPW-UMMCILCDSA-N [[(2r,3s,4r,5r)-5-(2-amino-6,8-dioxo-3,7-dihydropurin-9-yl)-3,4-dihydroxyoxolan-2-yl]methoxy-hydroxyphosphoryl] phosphono hydrogen phosphate Chemical compound C1=2NC(N)=NC(=O)C=2NC(=O)N1[C@@H]1O[C@H](COP(O)(=O)OP(O)(=O)OP(O)(O)=O)[C@@H](O)[C@H]1O JCHLKIQZUXYLPW-UMMCILCDSA-N 0.000 description 1
- 239000002253 acid Substances 0.000 description 1
- 150000007513 acids Chemical class 0.000 description 1
- 230000003213 activating effect Effects 0.000 description 1
- 230000007059 acute toxicity Effects 0.000 description 1
- 231100000403 acute toxicity Toxicity 0.000 description 1
- 230000010933 acylation Effects 0.000 description 1
- 238000005917 acylation reaction Methods 0.000 description 1
- 230000009603 aerobic growth Effects 0.000 description 1
- 150000001298 alcohols Chemical class 0.000 description 1
- 230000002152 alkylating effect Effects 0.000 description 1
- DTOSIQBPPRVQHS-PDBXOOCHSA-N alpha-linolenic acid Chemical compound CC\C=C/C\C=C/C\C=C/CCCCCCCC(O)=O DTOSIQBPPRVQHS-PDBXOOCHSA-N 0.000 description 1
- 235000020661 alpha-linolenic acid Nutrition 0.000 description 1
- 235000019270 ammonium chloride Nutrition 0.000 description 1
- 101150073130 ampR gene Proteins 0.000 description 1
- 229940088710 antibiotic agent Drugs 0.000 description 1
- 239000000427 antigen Substances 0.000 description 1
- 238000013459 approach Methods 0.000 description 1
- 150000004945 aromatic hydrocarbons Chemical class 0.000 description 1
- 238000002959 beta galactosidase induction Methods 0.000 description 1
- 102000006995 beta-Glucosidase Human genes 0.000 description 1
- 108010047754 beta-Glucosidase Proteins 0.000 description 1
- 230000001851 biosynthetic effect Effects 0.000 description 1
- 230000036983 biotransformation Effects 0.000 description 1
- 229960001561 bleomycin Drugs 0.000 description 1
- OYVAGSVQBOHSSS-UAPAGMARSA-O bleomycin A2 Chemical compound N([C@H](C(=O)N[C@H](C)[C@@H](O)[C@H](C)C(=O)N[C@@H]([C@H](O)C)C(=O)NCCC=1SC=C(N=1)C=1SC=C(N=1)C(=O)NCCC[S+](C)C)[C@@H](O[C@H]1[C@H]([C@@H](O)[C@H](O)[C@H](CO)O1)O[C@@H]1[C@H]([C@@H](OC(N)=O)[C@H](O)[C@@H](CO)O1)O)C=1N=CNC=1)C(=O)C1=NC([C@H](CC(N)=O)NC[C@H](N)C(N)=O)=NC(N)=C1C OYVAGSVQBOHSSS-UAPAGMARSA-O 0.000 description 1
- 230000000903 blocking effect Effects 0.000 description 1
- 210000004369 blood Anatomy 0.000 description 1
- 239000008280 blood Substances 0.000 description 1
- 230000037396 body weight Effects 0.000 description 1
- 229910052793 cadmium Inorganic materials 0.000 description 1
- BDOSMKKIYDKNTQ-UHFFFAOYSA-N cadmium atom Chemical compound [Cd] BDOSMKKIYDKNTQ-UHFFFAOYSA-N 0.000 description 1
- 239000001110 calcium chloride Substances 0.000 description 1
- 235000011148 calcium chloride Nutrition 0.000 description 1
- 229910001628 calcium chloride Inorganic materials 0.000 description 1
- 231100000260 carcinogenicity Toxicity 0.000 description 1
- 230000007670 carcinogenicity Effects 0.000 description 1
- 101150055766 cat gene Proteins 0.000 description 1
- 230000003197 catalytic effect Effects 0.000 description 1
- 230000006037 cell lysis Effects 0.000 description 1
- 239000006285 cell suspension Substances 0.000 description 1
- 210000002421 cell wall Anatomy 0.000 description 1
- 230000036755 cellular response Effects 0.000 description 1
- 230000009920 chelation Effects 0.000 description 1
- RCTYPNKXASFOBE-UHFFFAOYSA-M chloromercury Chemical compound [Hg]Cl RCTYPNKXASFOBE-UHFFFAOYSA-M 0.000 description 1
- 230000007665 chronic toxicity Effects 0.000 description 1
- 231100000160 chronic toxicity Toxicity 0.000 description 1
- 230000000052 comparative effect Effects 0.000 description 1
- 239000002299 complementary DNA Substances 0.000 description 1
- 239000003184 complementary RNA Substances 0.000 description 1
- 230000009918 complex formation Effects 0.000 description 1
- 230000002508 compound effect Effects 0.000 description 1
- 238000012790 confirmation Methods 0.000 description 1
- 238000001816 cooling Methods 0.000 description 1
- 230000002596 correlated effect Effects 0.000 description 1
- 101150018737 cyd gene Proteins 0.000 description 1
- 230000009089 cytolysis Effects 0.000 description 1
- 210000000805 cytoplasm Anatomy 0.000 description 1
- 230000034994 death Effects 0.000 description 1
- 238000006731 degradation reaction Methods 0.000 description 1
- 238000004925 denaturation Methods 0.000 description 1
- 230000036425 denaturation Effects 0.000 description 1
- 235000005911 diet Nutrition 0.000 description 1
- 230000037213 diet Effects 0.000 description 1
- 230000029087 digestion Effects 0.000 description 1
- 239000000539 dimer Substances 0.000 description 1
- 101150067506 dinB gene Proteins 0.000 description 1
- 101150073209 dinD gene Proteins 0.000 description 1
- 229910000397 disodium phosphate Inorganic materials 0.000 description 1
- 101150020338 dnaA gene Proteins 0.000 description 1
- 101150052825 dnaK gene Proteins 0.000 description 1
- 238000005516 engineering process Methods 0.000 description 1
- 230000007613 environmental effect Effects 0.000 description 1
- 230000009088 enzymatic function Effects 0.000 description 1
- 238000006911 enzymatic reaction Methods 0.000 description 1
- HPWMACWMMZPMSS-UHFFFAOYSA-N ethane;sulfuric acid Chemical compound CC.OS(O)(=O)=O HPWMACWMMZPMSS-UHFFFAOYSA-N 0.000 description 1
- ZMMJGEGLRURXTF-UHFFFAOYSA-N ethidium bromide Chemical compound [Br-].C12=CC(N)=CC=C2C2=CC=C(N)C=C2[N+](CC)=C1C1=CC=CC=C1 ZMMJGEGLRURXTF-UHFFFAOYSA-N 0.000 description 1
- 229960005542 ethidium bromide Drugs 0.000 description 1
- DEFVIWRASFVYLL-UHFFFAOYSA-N ethylene glycol bis(2-aminoethyl)tetraacetic acid Chemical compound OC(=O)CN(CC(O)=O)CCOCCOCCN(CC(O)=O)CC(O)=O DEFVIWRASFVYLL-UHFFFAOYSA-N 0.000 description 1
- 230000006846 excision repair Effects 0.000 description 1
- 102000013165 exonuclease Human genes 0.000 description 1
- 230000004438 eyesight Effects 0.000 description 1
- 230000004133 fatty acid degradation Effects 0.000 description 1
- 230000004136 fatty acid synthesis Effects 0.000 description 1
- 230000035558 fertility Effects 0.000 description 1
- 230000037406 food intake Effects 0.000 description 1
- 235000012631 food intake Nutrition 0.000 description 1
- 239000003517 fume Substances 0.000 description 1
- 108020001507 fusion proteins Proteins 0.000 description 1
- 102000037865 fusion proteins Human genes 0.000 description 1
- 101150045500 galK gene Proteins 0.000 description 1
- 239000011521 glass Substances 0.000 description 1
- 239000006481 glucose medium Substances 0.000 description 1
- 150000004676 glycans Chemical class 0.000 description 1
- 101150054900 gus gene Proteins 0.000 description 1
- 229940093915 gynecological organic acid Drugs 0.000 description 1
- 230000036541 health Effects 0.000 description 1
- 230000013632 homeostatic process Effects 0.000 description 1
- 238000000265 homogenisation Methods 0.000 description 1
- 210000005260 human cell Anatomy 0.000 description 1
- 235000003642 hunger Nutrition 0.000 description 1
- 230000002209 hydrophobic effect Effects 0.000 description 1
- 238000001727 in vivo Methods 0.000 description 1
- 230000000415 inactivating effect Effects 0.000 description 1
- 239000003112 inhibitor Substances 0.000 description 1
- 208000014674 injury Diseases 0.000 description 1
- 238000011081 inoculation Methods 0.000 description 1
- 230000010354 integration Effects 0.000 description 1
- 230000010189 intracellular transport Effects 0.000 description 1
- 238000011835 investigation Methods 0.000 description 1
- 150000002500 ions Chemical class 0.000 description 1
- 230000003902 lesion Effects 0.000 description 1
- 231100000518 lethal Toxicity 0.000 description 1
- 230000001665 lethal effect Effects 0.000 description 1
- 231100000225 lethality Toxicity 0.000 description 1
- 229960004488 linolenic acid Drugs 0.000 description 1
- KQQKGWQCNNTQJW-UHFFFAOYSA-N linolenic acid Natural products CC=CCCC=CCC=CCCCCCCCC(O)=O KQQKGWQCNNTQJW-UHFFFAOYSA-N 0.000 description 1
- 238000000464 low-speed centrifugation Methods 0.000 description 1
- 230000002934 lysing effect Effects 0.000 description 1
- 230000001320 lysogenic effect Effects 0.000 description 1
- 239000004325 lysozyme Substances 0.000 description 1
- 229960000274 lysozyme Drugs 0.000 description 1
- 235000010335 lysozyme Nutrition 0.000 description 1
- 230000002101 lytic effect Effects 0.000 description 1
- 229910052943 magnesium sulfate Inorganic materials 0.000 description 1
- 239000003550 marker Substances 0.000 description 1
- 238000010297 mechanical methods and process Methods 0.000 description 1
- 230000001404 mediated effect Effects 0.000 description 1
- 230000009061 membrane transport Effects 0.000 description 1
- 108020004999 messenger RNA Proteins 0.000 description 1
- 230000004060 metabolic process Effects 0.000 description 1
- 150000002739 metals Chemical class 0.000 description 1
- MYWUZJCMWCOHBA-VIFPVBQESA-N methamphetamine Chemical compound CN[C@@H](C)CC1=CC=CC=C1 MYWUZJCMWCOHBA-VIFPVBQESA-N 0.000 description 1
- 229930182817 methionine Natural products 0.000 description 1
- 108010020410 methionine sulfoxide reductase Proteins 0.000 description 1
- CXKWCBBOMKCUKX-UHFFFAOYSA-M methylene blue Chemical compound [Cl-].C1=CC(N(C)C)=CC2=[S+]C3=CC(N(C)C)=CC=C3N=C21 CXKWCBBOMKCUKX-UHFFFAOYSA-M 0.000 description 1
- 229960000907 methylthioninium chloride Drugs 0.000 description 1
- 230000003278 mimic effect Effects 0.000 description 1
- 230000004048 modification Effects 0.000 description 1
- 238000012986 modification Methods 0.000 description 1
- 238000001823 molecular biology technique Methods 0.000 description 1
- 229910000402 monopotassium phosphate Inorganic materials 0.000 description 1
- PJUIMOJAAPLTRJ-UHFFFAOYSA-N monothioglycerol Chemical compound OCC(O)CS PJUIMOJAAPLTRJ-UHFFFAOYSA-N 0.000 description 1
- 230000001459 mortal effect Effects 0.000 description 1
- 239000003471 mutagenic agent Substances 0.000 description 1
- 231100000707 mutagenic chemical Toxicity 0.000 description 1
- 230000003505 mutagenic effect Effects 0.000 description 1
- 231100000299 mutagenicity Toxicity 0.000 description 1
- 230000007886 mutagenicity Effects 0.000 description 1
- 230000007935 neutral effect Effects 0.000 description 1
- 230000002352 nonmutagenic effect Effects 0.000 description 1
- 231100000252 nontoxic Toxicity 0.000 description 1
- 230000003000 nontoxic effect Effects 0.000 description 1
- 229920001542 oligosaccharide Polymers 0.000 description 1
- 150000002482 oligosaccharides Chemical class 0.000 description 1
- 101150073640 ompF gene Proteins 0.000 description 1
- 230000003287 optical effect Effects 0.000 description 1
- 238000005457 optimization Methods 0.000 description 1
- 235000005985 organic acids Nutrition 0.000 description 1
- 150000001451 organic peroxides Chemical class 0.000 description 1
- 239000007800 oxidant agent Substances 0.000 description 1
- 230000001590 oxidative effect Effects 0.000 description 1
- 239000002245 particle Substances 0.000 description 1
- 230000035699 permeability Effects 0.000 description 1
- 150000002978 peroxides Chemical class 0.000 description 1
- 239000008363 phosphate buffer Substances 0.000 description 1
- 238000007747 plating Methods 0.000 description 1
- 238000003752 polymerase chain reaction Methods 0.000 description 1
- 229920001155 polypropylene Polymers 0.000 description 1
- 229920001282 polysaccharide Polymers 0.000 description 1
- 239000005017 polysaccharide Substances 0.000 description 1
- 101150015673 porin gene Proteins 0.000 description 1
- 238000011886 postmortem examination Methods 0.000 description 1
- 229910052700 potassium Inorganic materials 0.000 description 1
- 239000011591 potassium Substances 0.000 description 1
- 238000011533 pre-incubation Methods 0.000 description 1
- 239000002243 precursor Substances 0.000 description 1
- 230000008569 process Effects 0.000 description 1
- 230000006318 protein oxidation Effects 0.000 description 1
- 230000012743 protein tagging Effects 0.000 description 1
- 238000011002 quantification Methods 0.000 description 1
- 230000035484 reaction time Effects 0.000 description 1
- 101150079601 recA gene Proteins 0.000 description 1
- 239000002265 redox agent Substances 0.000 description 1
- 230000009467 reduction Effects 0.000 description 1
- 230000009711 regulatory function Effects 0.000 description 1
- 238000003303 reheating Methods 0.000 description 1
- 231100000916 relative toxicity Toxicity 0.000 description 1
- 230000033458 reproduction Effects 0.000 description 1
- 238000011160 research Methods 0.000 description 1
- 238000012552 review Methods 0.000 description 1
- 101150000706 rimK gene Proteins 0.000 description 1
- 238000012502 risk assessment Methods 0.000 description 1
- 101150098466 rpsL gene Proteins 0.000 description 1
- 235000017550 sodium carbonate Nutrition 0.000 description 1
- 229910000029 sodium carbonate Inorganic materials 0.000 description 1
- 238000005063 solubilization Methods 0.000 description 1
- 230000007928 solubilization Effects 0.000 description 1
- 239000002904 solvent Substances 0.000 description 1
- 241000894007 species Species 0.000 description 1
- 238000010561 standard procedure Methods 0.000 description 1
- 230000037351 starvation Effects 0.000 description 1
- 239000008223 sterile water Substances 0.000 description 1
- KDYFGRWQOYBRFD-UHFFFAOYSA-L succinate(2-) Chemical compound [O-]C(=O)CCC([O-])=O KDYFGRWQOYBRFD-UHFFFAOYSA-L 0.000 description 1
- 239000013589 supplement Substances 0.000 description 1
- 239000000725 suspension Substances 0.000 description 1
- 208000024891 symptom Diseases 0.000 description 1
- 230000002194 synthesizing effect Effects 0.000 description 1
- 235000019157 thiamine Nutrition 0.000 description 1
- 239000011721 thiamine Substances 0.000 description 1
- 229940035024 thioglycerol Drugs 0.000 description 1
- 210000001519 tissue Anatomy 0.000 description 1
- 101150082896 topA gene Proteins 0.000 description 1
- 230000002110 toxicologic effect Effects 0.000 description 1
- 230000005030 transcription termination Effects 0.000 description 1
- 238000001890 transfection Methods 0.000 description 1
- 238000003151 transfection method Methods 0.000 description 1
- 238000012546 transfer Methods 0.000 description 1
- 230000009466 transformation Effects 0.000 description 1
- 229910052723 transition metal Inorganic materials 0.000 description 1
- 150000003624 transition metals Chemical class 0.000 description 1
- 238000009281 ultraviolet germicidal irradiation Methods 0.000 description 1
- 239000004061 uncoupling agent Substances 0.000 description 1
- 108020005087 unfolded proteins Proteins 0.000 description 1
- 210000002700 urine Anatomy 0.000 description 1
- 210000002845 virion Anatomy 0.000 description 1
- DGVVWUTYPXICAM-UHFFFAOYSA-N β‐Mercaptoethanol Chemical compound OCCS DGVVWUTYPXICAM-UHFFFAOYSA-N 0.000 description 1
Classifications
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
- C12N15/00—Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
- C12Q1/6876—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes
- C12Q1/6888—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for detection or identification of organisms
- C12Q1/689—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for detection or identification of organisms for bacteria
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
- C12Q1/6897—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids involving reporter genes operably linked to promoters
Landscapes
- Chemical & Material Sciences (AREA)
- Life Sciences & Earth Sciences (AREA)
- Organic Chemistry (AREA)
- Health & Medical Sciences (AREA)
- Engineering & Computer Science (AREA)
- Zoology (AREA)
- Wood Science & Technology (AREA)
- Genetics & Genomics (AREA)
- Proteomics, Peptides & Aminoacids (AREA)
- Bioinformatics & Cheminformatics (AREA)
- General Engineering & Computer Science (AREA)
- Biotechnology (AREA)
- Analytical Chemistry (AREA)
- Biochemistry (AREA)
- Biophysics (AREA)
- Microbiology (AREA)
- Molecular Biology (AREA)
- General Health & Medical Sciences (AREA)
- Physics & Mathematics (AREA)
- Immunology (AREA)
- Biomedical Technology (AREA)
- Plant Pathology (AREA)
- Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
- Investigating Or Analysing Biological Materials (AREA)
- Saccharide Compounds (AREA)
Applications Claiming Priority (2)
| Application Number | Priority Date | Filing Date | Title |
|---|---|---|---|
| US91079392A | 1992-07-06 | 1992-07-06 | |
| PCT/US1993/006537 WO1994001584A1 (fr) | 1992-07-06 | 1993-07-06 | Procedes et necessaires de diagnostic pour determiner la toxicite utilisant des promoteurs de stress bacteriens fusionnes a des genes rapporteurs |
Publications (3)
| Publication Number | Publication Date |
|---|---|
| NO950040D0 NO950040D0 (no) | 1995-01-05 |
| NO950040L NO950040L (no) | 1995-03-06 |
| NO319372B1 true NO319372B1 (no) | 2005-07-25 |
Family
ID=25429335
Family Applications (1)
| Application Number | Title | Priority Date | Filing Date |
|---|---|---|---|
| NO19950040A NO319372B1 (no) | 1992-07-06 | 1995-01-05 | Fremgangsmate, samt diagnostiske sett for bestemmelse av toksisitet ved anvendelse av bakterielle stresspromotere fusert til reporter-gener |
Country Status (15)
| Country | Link |
|---|---|
| US (2) | US5589337A (fr) |
| EP (1) | EP0651825B1 (fr) |
| JP (1) | JP3456703B2 (fr) |
| KR (1) | KR100300932B1 (fr) |
| AT (1) | ATE162225T1 (fr) |
| AU (1) | AU687353B2 (fr) |
| CA (1) | CA2139667C (fr) |
| DE (1) | DE69316368T2 (fr) |
| DK (1) | DK0651825T3 (fr) |
| ES (1) | ES2113546T3 (fr) |
| GR (1) | GR3026639T3 (fr) |
| HK (1) | HK1008433A1 (fr) |
| NO (1) | NO319372B1 (fr) |
| SG (1) | SG77101A1 (fr) |
| WO (1) | WO1994001584A1 (fr) |
Families Citing this family (51)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| IL107815A (en) * | 1992-12-04 | 2003-12-10 | Du Pont | Genetic constructs comprising a stress-responsive promoter linked to a lux reporter operon and methods of use in environmental testing |
| EP0680517B2 (fr) * | 1993-01-21 | 2005-01-19 | President And Fellows Of Harvard College | Methodes et trousses de diagnostic faisant appel aux promoteurs de stress des mammiferes pour determiner la toxicite d'un compose |
| GB9420735D0 (en) * | 1994-10-14 | 1994-11-30 | Karobio Ab | Reporter cell line |
| EP0793729B1 (fr) * | 1994-11-23 | 2002-08-21 | E.I. Du Pont De Nemours & Company Incorporated | Reactif bacterien bioluminescent lyophilise servant a la detection d'agents toxiques |
| US6387651B1 (en) | 1995-04-12 | 2002-05-14 | Biolog, Inc. | Comparative phenotype analysis of two or more microorganisms using a plurality of substrates within a microwell device |
| EP0877937B1 (fr) | 1996-01-26 | 2002-05-22 | Virco N.V. | Procede pour evaluer la chimiotherapie de patients seropositifs vih base sur la sensibilite medicamenteuse phenotypique de la souche vih du patient |
| EP0943000A1 (fr) * | 1996-11-15 | 1999-09-22 | E.I. Du Pont De Nemours And Company | Procede tres sensible de detection sur de faibles volumes des atteintes a l'environnement |
| EP1023434A4 (fr) * | 1997-09-18 | 2004-12-01 | Smithkline Beecham Corp | Procede de criblage de composes antimicrobiens |
| EP0950717A1 (fr) * | 1998-04-14 | 1999-10-20 | "VLAAMSE INSTELLING VOOR TECHNOLOGISCH ONDERZOEK", afgekort "V.I.T.O." | Système diagnostique et procédé pour la détermination de la présence d'une substance génotoxique dans un échantillon |
| US6953666B1 (en) | 1998-11-06 | 2005-10-11 | Emory University | Biomarkers for oxidative stress |
| WO2000028072A1 (fr) * | 1998-11-06 | 2000-05-18 | Emory University | Biomarqueurs du stress d'oxydation |
| AU4546300A (en) * | 1999-04-10 | 2000-11-14 | Merlin Gesellschaft Fur Mikrobiologische Diagnostika Mbh | Genotypic classification method |
| US6410255B1 (en) * | 1999-05-05 | 2002-06-25 | Aurora Biosciences Corporation | Optical probes and assays |
| US6673554B1 (en) * | 1999-06-14 | 2004-01-06 | Trellie Bioinformatics, Inc. | Protein localization assays for toxicity and antidotes thereto |
| US6931396B1 (en) | 1999-06-29 | 2005-08-16 | Gene Logic Inc. | Biological data processing |
| US20030232056A1 (en) * | 1999-09-10 | 2003-12-18 | Corixa Corporation | Compositions and methods for the therapy and diagnosis of ovarian cancer |
| GB2355791B (en) * | 1999-10-28 | 2004-10-20 | Molecular Light Tech Res Ltd | Detection of mRNA expression using chemiluminescent labelled probes |
| ATE439441T1 (de) * | 2000-02-23 | 2009-08-15 | Life Technologies Corp | Veränderte, fluoreszierende proteine |
| US6696239B1 (en) | 2000-04-20 | 2004-02-24 | Biolog, Inc. | Comparative phenotype analysis for assessment of biological active compounds such as antimicrobials |
| US7020561B1 (en) | 2000-05-23 | 2006-03-28 | Gene Logic, Inc. | Methods and systems for efficient comparison, identification, processing, and importing of gene expression data |
| US20030171876A1 (en) * | 2002-03-05 | 2003-09-11 | Victor Markowitz | System and method for managing gene expression data |
| US6667153B1 (en) | 2000-06-26 | 2003-12-23 | Susan Margaret Thomas | Composition and method for detecting mutagens |
| EP1409718A2 (fr) * | 2000-07-21 | 2004-04-21 | Phase-1 Molecular Toxicology | Genes canins de toxicite |
| US20030119094A1 (en) * | 2001-09-24 | 2003-06-26 | Irm Llc | Solubility reporter gene constructs |
| EP1364055A4 (fr) * | 2000-11-21 | 2004-08-25 | Irm Llc | Constructions de genes rapporteurs de solubilite |
| WO2002059560A2 (fr) * | 2001-01-23 | 2002-08-01 | Gene Logic, Inc. | Methode et systeme de prediction de l'activite biologique, y compris de la toxicologie et de la toxicite de substances |
| US7054758B2 (en) * | 2001-01-30 | 2006-05-30 | Sciona Limited | Computer-assisted means for assessing lifestyle risk factors |
| US7405081B2 (en) * | 2001-02-05 | 2008-07-29 | Pan Shen Q | Methods and kits for identifying scavengers of reactive oxygen species (ROS) |
| WO2002073504A1 (fr) * | 2001-03-14 | 2002-09-19 | Gene Logic, Inc. | Systeme et procede d'extraction et d'utilisation de donnees d'expression genique provenant de multiples sources |
| US20020146698A1 (en) * | 2001-04-05 | 2002-10-10 | Genelink, Inc. | Kits and methods for assessing oxidative stress |
| US7211383B2 (en) * | 2001-04-05 | 2007-05-01 | Genelink, Inc. | Kits and methods for assessing skin health |
| US7251642B1 (en) | 2001-08-06 | 2007-07-31 | Gene Logic Inc. | Analysis engine and work space manager for use with gene expression data |
| DE20116898U1 (de) * | 2001-10-15 | 2002-01-17 | Festo Ag & Co | Mikroventil |
| KR20030040923A (ko) * | 2001-11-17 | 2003-05-23 | 광주과학기술원 | 산화적 손상과 관련된 유해성 탐지를 위한 재조합발광박테리아 대장균ＤＨ5@/ｐＳｏｄａＬｕｘ（ＥＢＨＪ1）［ＫＣＴＣ10098ＢＰ］ |
| KR100461757B1 (ko) * | 2002-06-20 | 2004-12-14 | 광주과학기술원 | 화학물질의 독성과 그 유해성을 탐지할 수 있는 재조합발광 박테리아 |
| US7727752B2 (en) | 2003-07-29 | 2010-06-01 | Life Technologies Corporation | Kinase and phosphatase assays |
| CA2445420A1 (fr) | 2003-07-29 | 2005-01-29 | Invitrogen Corporation | Tests de kinase et de phosphatase |
| WO2005045426A2 (fr) * | 2003-11-10 | 2005-05-19 | Aic | Profilage de l'expression genetique de composes dangereux et algorithme correspondant de groupage de base de donnees |
| GB0415963D0 (en) * | 2004-07-16 | 2004-08-18 | Cxr Biosciences Ltd | Detection of cellular stress |
| CA2475240A1 (fr) * | 2004-07-20 | 2006-01-20 | Biophys, Inc. | Methode et dispositif permettant d'etablir des courbes d'etalonnage interne dynamique en vue de mesurer la dose veritable |
| CA2475456A1 (fr) * | 2004-07-20 | 2006-01-20 | Biophys, Inc. | Methode et dispositif d'optimisation de la liaison des substrats d'anticorps et d'analytes par absorption d'energie moindre |
| WO2006096063A1 (fr) * | 2005-03-11 | 2006-09-14 | Stichting Voor De Technische Wetenschappen | Construction et methode pour cribler, selectionner et identifier des facteurs de stress |
| US7646450B2 (en) * | 2005-12-29 | 2010-01-12 | Lg Display Co., Ltd. | Light emitting diode array, method of manufacturing the same, backlight assembly having the same, and LCD having the same |
| ES2307395B2 (es) * | 2006-09-04 | 2009-07-09 | Universidad De Oviedo | Metodo rapido de deteccion y evaluacion de agentes genotoxicos. |
| WO2008038271A1 (fr) | 2006-09-28 | 2008-04-03 | Xeround Systems Ltd. | Appareil et procédé pour une base de données globale de stockage distribué |
| US8647642B2 (en) | 2008-09-18 | 2014-02-11 | Aviex Technologies, Llc | Live bacterial vaccines resistant to carbon dioxide (CO2), acidic PH and/or osmolarity for viral infection prophylaxis or treatment |
| US11129906B1 (en) | 2016-12-07 | 2021-09-28 | David Gordon Bermudes | Chimeric protein toxins for expression by therapeutic bacteria |
| US11180535B1 (en) | 2016-12-07 | 2021-11-23 | David Gordon Bermudes | Saccharide binding, tumor penetration, and cytotoxic antitumor chimeric peptides from therapeutic bacteria |
| SG11202003885UA (en) | 2017-11-08 | 2020-05-28 | Twinstrand Biosciences Inc | Reagents and adapters for nucleic acid sequencing and methods for making such reagents and adapters |
| WO2019160998A1 (fr) * | 2018-02-13 | 2019-08-22 | Twinstrand Biosciences, Inc. | Méthodes et réactifs pour la détection et l'évaluation de la génotoxicité |
| WO2020014693A1 (fr) | 2018-07-12 | 2020-01-16 | Twinstrand Biosciences, Inc. | Procédés et réactifs pour caractériser une édition génomique et une expansion clonale, et applications associées |
Family Cites Families (5)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| EP0063522B1 (fr) * | 1981-04-14 | 1989-07-19 | Institut Pasteur | Mécanisme inductible de couplage de la division cellulaire et de la replication du DNA dans eschérichia coli |
| FR2533584B1 (fr) * | 1982-09-28 | 1986-03-21 | Pasteur Institut | Procede de detection du pouvoir mutagene de substances, susceptibles d'induire la deterioration d'adn cellulaires, mettant en jeu la production d'une reponse sos |
| US4569916A (en) * | 1984-05-21 | 1986-02-11 | Massachusetts Institute Of Technology | Assay for tumor promoting agents |
| EP0370813A3 (fr) * | 1988-11-25 | 1991-06-19 | Exemplar Corporation | Dosage rapide par criblage de mutagénèse et tératogénèse |
| JP3046063B2 (ja) * | 1989-03-17 | 2000-05-29 | イー・アイ・デユポン・ドウ・ヌムール・アンド・カンパニー | 遺伝子の発現の外部の調節 |
-
1993
- 1993-07-06 CA CA002139667A patent/CA2139667C/fr not_active Expired - Lifetime
- 1993-07-06 EP EP93917113A patent/EP0651825B1/fr not_active Expired - Lifetime
- 1993-07-06 KR KR1019950700038A patent/KR100300932B1/ko not_active IP Right Cessation
- 1993-07-06 DK DK93917113T patent/DK0651825T3/da active
- 1993-07-06 AT AT93917113T patent/ATE162225T1/de not_active IP Right Cessation
- 1993-07-06 JP JP50356294A patent/JP3456703B2/ja not_active Expired - Lifetime
- 1993-07-06 US US08/367,122 patent/US5589337A/en not_active Expired - Lifetime
- 1993-07-06 ES ES93917113T patent/ES2113546T3/es not_active Expired - Lifetime
- 1993-07-06 SG SG1996001688A patent/SG77101A1/en unknown
- 1993-07-06 WO PCT/US1993/006537 patent/WO1994001584A1/fr active IP Right Grant
- 1993-07-06 AU AU45884/93A patent/AU687353B2/en not_active Expired
- 1993-07-06 DE DE69316368T patent/DE69316368T2/de not_active Expired - Lifetime
-
1994
- 1994-04-21 US US08/231,990 patent/US5585232A/en not_active Expired - Lifetime
-
1995
- 1995-01-05 NO NO19950040A patent/NO319372B1/no not_active IP Right Cessation
-
1998
- 1998-04-14 GR GR980400840T patent/GR3026639T3/el unknown
- 1998-07-14 HK HK98109159A patent/HK1008433A1/xx not_active IP Right Cessation
Also Published As
| Publication number | Publication date |
|---|---|
| NO950040L (no) | 1995-03-06 |
| CA2139667A1 (fr) | 1994-01-20 |
| HK1008433A1 (en) | 1999-05-07 |
| US5589337A (en) | 1996-12-31 |
| JP3456703B2 (ja) | 2003-10-14 |
| DE69316368D1 (de) | 1998-02-19 |
| US5585232A (en) | 1996-12-17 |
| WO1994001584A1 (fr) | 1994-01-20 |
| KR100300932B1 (ko) | 2001-10-22 |
| GR3026639T3 (en) | 1998-07-31 |
| EP0651825A1 (fr) | 1995-05-10 |
| ES2113546T3 (es) | 1998-05-01 |
| JPH08501930A (ja) | 1996-03-05 |
| EP0651825B1 (fr) | 1998-01-14 |
| KR950702639A (ko) | 1995-07-29 |
| AU687353B2 (en) | 1998-02-26 |
| DE69316368T2 (de) | 1998-06-25 |
| CA2139667C (fr) | 2005-03-29 |
| NO950040D0 (no) | 1995-01-05 |
| ATE162225T1 (de) | 1998-01-15 |
| AU4588493A (en) | 1994-01-31 |
| SG77101A1 (en) | 2000-12-19 |
| DK0651825T3 (da) | 1998-09-14 |
Similar Documents
| Publication | Publication Date | Title |
|---|---|---|
| NO319372B1 (no) | Fremgangsmate, samt diagnostiske sett for bestemmelse av toksisitet ved anvendelse av bakterielle stresspromotere fusert til reporter-gener | |
| Shimohata et al. | The Cpx stress response system of Escherichia coli senses plasma membrane proteins and controls HtpX, a membrane protease with a cytosolic active site | |
| Francis et al. | The type III secretion chaperone LcrH co‐operates with YopD to establish a negative, regulatory loop for control of Yop synthesis in Yersinia pseudotuberculosis | |
| Alba et al. | degS (hhoB) is an essential Escherichia coli gene whose indispensable function is to provide σE activity | |
| Chauhan et al. | Interference of Mycobacterium tuberculosis cell division by Rv2719c, a cell wall hydrolase | |
| Deloménie et al. | Identification and functional characterization of arylamine N-acetyltransferases in eubacteria: evidence for highly selective acetylation of 5-aminosalicylic acid | |
| Campodonico et al. | A yeast genetic system for the identification and characterization of substrate proteins transferred into host cells by the Legionella pneumophila Dot/Icm system | |
| Raivio et al. | Tethering of CpxP to the inner membrane prevents spheroplast induction of the Cpx envelope stress response | |
| Ades et al. | The Escherichia coli ςE-dependent extracytoplasmic stress response is controlled by the regulated proteolysis of an anti-ς factor | |
| Stohl et al. | The transcriptome response of Neisseria gonorrhoeae to hydrogen peroxide reveals genes with previously uncharacterized roles in oxidative damage protection | |
| Ionescu et al. | Overproduction of exopolysaccharides by an Escherichia coli K-12 rpoS mutant in response to osmotic stress | |
| Pulschen et al. | The stringent response plays a key role in B acillus subtilis survival of fatty acid starvation | |
| Schnupf et al. | Regulated translation of listeriolysin O controls virulence of Listeria monocytogenes | |
| Loprasert et al. | Molecular and physiological analysis of an OxyR‐regulated ahpC promoter in Xanthomonas campestris pv. phaseoli | |
| Ben‐Yaakov et al. | The regulatory network of Vibrio parahaemolyticus type VI secretion system 1 | |
| Kumar et al. | Characterization of DsbD in Neisseria meningitidis | |
| Stubbendieck et al. | Linearmycins activate a two-component signaling system involved in bacterial competition and biofilm morphology | |
| Doronina et al. | The proteolytic control of restriction activity in Escherichia coli K‐12 | |
| Jovanovic et al. | Physical, functional and conditional interactions between ArcAB and phage shock proteins upon secretin‐induced stress in Escherichia coli | |
| Ruxin et al. | Regulatory involvement of the PerR and SloR metalloregulators in the Streptococcus mutans oxidative stress response | |
| Khodai-Kalaki et al. | Characterization of the AtsR hybrid sensor kinase phosphorelay pathway and identification of its response regulator in Burkholderia cenocepacia | |
| Loprasert et al. | The Burkholderia pseudomallei oxyR gene: expression analysis and mutant characterization | |
| Usongo et al. | Depletion of RNase HI activity in Escherichia coli lacking DNA topoisomerase I leads to defects in DNA supercoiling and segregation | |
| Morelle et al. | Contact with host cells induces a DNA repair system in pathogenic Neisseriae | |
| do Carmo de Freire Bastos et al. | Regulation of the Enterococcus faecalis pAD1‐related sex pheromone response: analyses of traD expression and its role in controlling conjugation functions |
Legal Events
| Date | Code | Title | Description |
|---|---|---|---|
| MK1K | Patent expired |