ES2676062T3 - Procedimientos para el enriquecimiento de ácido nucleico mutado de una mezcla - Google Patents

Procedimientos para el enriquecimiento de ácido nucleico mutado de una mezcla Download PDF

Info

Publication number
ES2676062T3
ES2676062T3 ES14805538.7T ES14805538T ES2676062T3 ES 2676062 T3 ES2676062 T3 ES 2676062T3 ES 14805538 T ES14805538 T ES 14805538T ES 2676062 T3 ES2676062 T3 ES 2676062T3
Authority
ES
Spain
Prior art keywords
nucleic acid
target nucleic
variant
oligonucleotide
double helix
Prior art date
Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
Active
Application number
ES14805538.7T
Other languages
English (en)
Spanish (es)
Inventor
Nancy Schoenbrunner
Amar Gupta
Kevin JANSSEN
Current Assignee (The listed assignees may be inaccurate. Google has not performed a legal analysis and makes no representation or warranty as to the accuracy of the list.)
F Hoffmann La Roche AG
Original Assignee
F Hoffmann La Roche AG
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by F Hoffmann La Roche AG filed Critical F Hoffmann La Roche AG
Application granted granted Critical
Publication of ES2676062T3 publication Critical patent/ES2676062T3/es
Active legal-status Critical Current
Anticipated expiration legal-status Critical

Links

Classifications

    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6806Preparing nucleic acids for analysis, e.g. for polymerase chain reaction [PCR] assay
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6813Hybridisation assays
    • C12Q1/6827Hybridisation assays for detection of mutation or polymorphism

Landscapes

  • Chemical & Material Sciences (AREA)
  • Organic Chemistry (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Zoology (AREA)
  • Wood Science & Technology (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Health & Medical Sciences (AREA)
  • Engineering & Computer Science (AREA)
  • Analytical Chemistry (AREA)
  • Biophysics (AREA)
  • Immunology (AREA)
  • Microbiology (AREA)
  • Molecular Biology (AREA)
  • Biotechnology (AREA)
  • Physics & Mathematics (AREA)
  • Biochemistry (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • General Engineering & Computer Science (AREA)
  • General Health & Medical Sciences (AREA)
  • Genetics & Genomics (AREA)
  • Chemical Kinetics & Catalysis (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
ES14805538.7T 2013-11-27 2014-11-25 Procedimientos para el enriquecimiento de ácido nucleico mutado de una mezcla Active ES2676062T3 (es)

Applications Claiming Priority (3)

Application Number Priority Date Filing Date Title
US201361909587P 2013-11-27 2013-11-27
US201361909587P 2013-11-27
PCT/EP2014/075460 WO2015078831A1 (en) 2013-11-27 2014-11-25 Methods for the enrichment of mutated nucleic acid from a mixture

Publications (1)

Publication Number Publication Date
ES2676062T3 true ES2676062T3 (es) 2018-07-16

Family

ID=52000821

Family Applications (1)

Application Number Title Priority Date Filing Date
ES14805538.7T Active ES2676062T3 (es) 2013-11-27 2014-11-25 Procedimientos para el enriquecimiento de ácido nucleico mutado de una mezcla

Country Status (7)

Country Link
US (1) US9873908B2 (enExample)
EP (1) EP3074529B1 (enExample)
JP (1) JP6553598B2 (enExample)
CN (1) CN105745336B (enExample)
CA (1) CA2926693C (enExample)
ES (1) ES2676062T3 (enExample)
WO (1) WO2015078831A1 (enExample)

Families Citing this family (13)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
ES2665500T3 (es) 2010-03-08 2018-04-26 Dana-Farber Cancer Institute, Inc. Enriquecimiento de una PCR por COLD completa con secuencia de bloqueo de referencia
DK2691541T3 (en) 2011-03-31 2018-01-22 Dana Farber Cancer Inst Inc PROCEDURE FOR ENRICHMENT OF SINGLE DRAWED MUTANTS SEQUENCES FROM A MIXTURE OF WILD TYPE AND MUTANTS
EP3907297A1 (en) 2011-04-15 2021-11-10 The Johns Hopkins University Safe sequencing system
US11525163B2 (en) 2012-10-29 2022-12-13 The Johns Hopkins University Papanicolaou test for ovarian and endometrial cancers
JP6941568B2 (ja) 2015-06-24 2021-09-29 デイナ ファーバー キャンサー インスティチュート,インコーポレイテッド ヌクレアーゼを使用する野生型dnaの選択的分解および突然変異体対立遺伝子の濃縮
US11286531B2 (en) 2015-08-11 2022-03-29 The Johns Hopkins University Assaying ovarian cyst fluid
CA3046953A1 (en) * 2016-12-12 2018-06-21 Dana Farber Cancer Institute, Inc. Compositions and methods for molecular barcoding of dna molecules prior to mutation enrichment and/or mutation detection
SG11202001010UA (en) 2017-08-07 2020-03-30 Univ Johns Hopkins Methods and materials for assessing and treating cancer
US20200399683A1 (en) * 2018-02-26 2020-12-24 Cy Molecular Diagnostics, Inc. Composition and Methods For Affinity Directed Enrichment of Rare Species
CA3103754C (en) 2018-07-19 2022-06-07 Biofidelity Ltd Improved polynucleotide sequence detection method
CA3170345A1 (en) 2020-02-14 2021-08-19 The Johns Hopkins University Methods and materials for assessing nucleic acids
IL307733A (en) * 2021-04-15 2023-12-01 Biofidelity Enrichment and discovery of nucleic acids
CN113774113B (zh) * 2021-09-17 2023-07-04 广州医科大学附属第一医院(广州呼吸中心) 一种富集突变基因序列的方法和应用

Family Cites Families (18)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US6120992A (en) * 1993-11-04 2000-09-19 Valigene Corporation Use of immobilized mismatch binding protein for detection of mutations and polymorphisms, and allele identification in a diseased human
WO1997034015A1 (en) 1996-03-15 1997-09-18 The Penn State Research Foundation Detection of extracellular tumor-associated nucleic acid in blood plasma or serum using nucleic acid amplification assays
US6630301B1 (en) 1997-03-14 2003-10-07 The Penn State Research Foundation Detection of extracellular tumor-associated nucleic acid in blood plasma or serum
US6031098A (en) 1997-08-11 2000-02-29 California Institute Of Technology Detection and treatment of duplex polynucleotide damage
SE9902741D0 (sv) 1999-07-19 1999-07-19 Boerries Kemper Method for the enrichment of heteroduplexes and its use in mutation detection
US20030082537A1 (en) * 2000-05-23 2003-05-01 Stanton Vincent P. Methods for genetic analysis of DNA to detect sequence variances
US20020132244A1 (en) 2000-09-27 2002-09-19 Xiao-Cheng Li-Sucholeiki Methods for detecting rare polymorphic variants in genomic DNA sequences
US6808884B2 (en) * 2000-12-08 2004-10-26 California Institute Of Technology Methods and compositions for detecting polynucleotide duplex damage and errors
WO2002086196A1 (en) * 2001-04-19 2002-10-31 Rd Chemical Company Copper acid baths, system and method for electroplating high aspect ratio substrates
WO2002086169A1 (en) 2001-04-23 2002-10-31 Dana-Farber Cancer Institute, Inc. Methods for rapid screening of polymorphisms, mutations and methylation
GB2382137A (en) 2001-11-20 2003-05-21 Mats Gullberg Nucleic acid enrichment
CN101056990A (zh) * 2004-03-01 2007-10-17 芝加哥大学 表皮生长因子受体基因启动子的多态性
ATE548469T1 (de) 2005-10-14 2012-03-15 Univ State Cleveland Verfahren zur identifizierung mehrerer mutationen oder methylierungsmarkern in einem dominierenden hintergrund von wildtyp-dna
US20070154892A1 (en) 2005-12-30 2007-07-05 Simon Wain-Hobson Differential amplification of mutant nucleic acids by PCR in a mixure of nucleic acids
WO2007084380A2 (en) 2006-01-13 2007-07-26 California Institute Of Technology Compounds and methods for nucleic acid mismatch detection
ES2665500T3 (es) 2010-03-08 2018-04-26 Dana-Farber Cancer Institute, Inc. Enriquecimiento de una PCR por COLD completa con secuencia de bloqueo de referencia
US20120164641A1 (en) 2010-12-22 2012-06-28 Roche Molecular Systems, Inc. Methods and Compositions for Detecting Mutation in the Human Epidermal Growth Factor Receptor Gene
CN103215361A (zh) * 2013-04-18 2013-07-24 深圳联合医学科技有限公司 等位基因变体检测方法、试剂盒及组合物

Also Published As

Publication number Publication date
US9873908B2 (en) 2018-01-23
US20150147760A1 (en) 2015-05-28
EP3074529A1 (en) 2016-10-05
JP6553598B2 (ja) 2019-07-31
CA2926693C (en) 2018-06-19
CN105745336B (zh) 2019-03-01
WO2015078831A1 (en) 2015-06-04
CN105745336A (zh) 2016-07-06
EP3074529B1 (en) 2018-05-02
CA2926693A1 (en) 2015-06-04
JP2016539624A (ja) 2016-12-22

Similar Documents

Publication Publication Date Title
ES2676062T3 (es) Procedimientos para el enriquecimiento de ácido nucleico mutado de una mezcla
JP7100680B2 (ja) ゲノム適用および治療適用のための、核酸分子のクローン複製および増幅のためのシステムおよび方法
ES2886923T3 (es) Métodos y composición para generar sondas de ADN de secuencia única, marcaje de sondas de ADN y el uso de estas sondas
CN103827317B (zh) 用于检测目标核酸的方法与组合物
JP2021000085A (ja) 化学組成物とそれを利用する方法
JP5632476B2 (ja) 核酸の違いを検出するためのプローブの形式
US7033753B1 (en) Compositions and methods for nonenzymatic ligation of oligonucleotides and detection of genetic polymorphisms
US9279146B2 (en) Compounds and methods for the enrichment of mutated nucleic acid from a mixture
CN105209639A (zh) 在固相载体扩增核酸的方法
Wang et al. Sensitive detection of cancer gene based on a nicking-mediated RCA of circular DNA nanomachine
JP6339590B2 (ja) 核酸配列分析に使用される標識オリゴヌクレオチドプローブ
EP3864658A1 (en) Digital polymerase chain reaction method for detecting nucleic acids in samples
Meng Decoding the Fabric of Life: Nanopore Sensing of Nucleic Acid Structure from the Primary to the Quaternary
WO2023108145A1 (en) Universal probes for amplification and detection of nucleic acids
ES2629979T3 (es) Métodos y composición para generar sondas de ADN de secuencia única, marcaje de sondas de ADN y el uso de estas sondas
Ranasinghe Novel techniques for genetic analysis
HK1232917B (en) Methods for clonal replication and amplification of nucleic acid molecules for genomic and therapeutic applications