EP0784792A2 - Procede de recherche de l'interaction entre des biomolecules par resonance de plasmon superficiel - Google Patents
Procede de recherche de l'interaction entre des biomolecules par resonance de plasmon superficielInfo
- Publication number
- EP0784792A2 EP0784792A2 EP95933414A EP95933414A EP0784792A2 EP 0784792 A2 EP0784792 A2 EP 0784792A2 EP 95933414 A EP95933414 A EP 95933414A EP 95933414 A EP95933414 A EP 95933414A EP 0784792 A2 EP0784792 A2 EP 0784792A2
- Authority
- EP
- European Patent Office
- Prior art keywords
- peptide
- group
- chelating agent
- poly
- biosensor unit
- Prior art date
- Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
- Ceased
Links
- 238000000034 method Methods 0.000 title claims abstract description 52
- 230000003993 interaction Effects 0.000 title claims abstract description 17
- 238000002198 surface plasmon resonance spectroscopy Methods 0.000 title claims abstract description 12
- 230000008569 process Effects 0.000 title abstract description 6
- 108090000765 processed proteins & peptides Proteins 0.000 claims abstract description 55
- 102000004169 proteins and genes Human genes 0.000 claims abstract description 46
- 108090000623 proteins and genes Proteins 0.000 claims abstract description 46
- MGFYIUFZLHCRTH-UHFFFAOYSA-N nitrilotriacetic acid Chemical class OC(=O)CN(CC(O)=O)CC(O)=O MGFYIUFZLHCRTH-UHFFFAOYSA-N 0.000 claims abstract description 23
- 229910052751 metal Inorganic materials 0.000 claims abstract description 19
- 239000002184 metal Substances 0.000 claims abstract description 19
- 239000013522 chelant Substances 0.000 claims abstract description 15
- 239000003153 chemical reaction reagent Substances 0.000 claims abstract description 10
- 239000002738 chelating agent Substances 0.000 claims description 41
- 239000000017 hydrogel Substances 0.000 claims description 33
- SYFQYGMJENQVQT-UHFFFAOYSA-N 6-amino-2-[bis(carboxymethyl)amino]hexanoic acid Chemical compound NCCCCC(C(O)=O)N(CC(O)=O)CC(O)=O SYFQYGMJENQVQT-UHFFFAOYSA-N 0.000 claims description 15
- 229920002307 Dextran Polymers 0.000 claims description 15
- 238000006243 chemical reaction Methods 0.000 claims description 13
- 239000011159 matrix material Substances 0.000 claims description 12
- 229910021645 metal ion Inorganic materials 0.000 claims description 12
- ZOLCYDKBCZUAPU-UHFFFAOYSA-N 2-amino-2-(4-aminobutyl)-3-methylbutanedioic acid Chemical compound OC(=O)C(C)C(N)(C(O)=O)CCCCN ZOLCYDKBCZUAPU-UHFFFAOYSA-N 0.000 claims description 11
- 102000004196 processed proteins & peptides Human genes 0.000 claims description 11
- 125000003178 carboxy group Chemical group [H]OC(*)=O 0.000 claims description 10
- 125000000487 histidyl group Chemical group [H]N([H])C(C(=O)O*)C([H])([H])C1=C([H])N([H])C([H])=N1 0.000 claims description 10
- 230000008929 regeneration Effects 0.000 claims description 10
- 238000011069 regeneration method Methods 0.000 claims description 10
- 125000000217 alkyl group Chemical group 0.000 claims description 9
- 239000012736 aqueous medium Substances 0.000 claims description 7
- 238000000746 purification Methods 0.000 claims description 7
- 238000001042 affinity chromatography Methods 0.000 claims description 6
- NBZBKCUXIYYUSX-UHFFFAOYSA-N iminodiacetic acid Chemical group OC(=O)CNCC(O)=O NBZBKCUXIYYUSX-UHFFFAOYSA-N 0.000 claims description 6
- 125000001424 substituent group Chemical group 0.000 claims description 6
- 125000002947 alkylene group Chemical group 0.000 claims description 5
- 125000002057 carboxymethyl group Chemical group [H]OC(=O)C([H])([H])[*] 0.000 claims description 5
- 238000011835 investigation Methods 0.000 claims description 5
- 150000002500 ions Chemical class 0.000 claims description 5
- 230000002411 adverse Effects 0.000 claims description 4
- -1 carragen Polymers 0.000 claims description 4
- 239000002609 medium Substances 0.000 claims description 4
- 239000000376 reactant Substances 0.000 claims description 4
- 150000003839 salts Chemical class 0.000 claims description 4
- 229920000936 Agarose Polymers 0.000 claims description 3
- 239000002202 Polyethylene glycol Substances 0.000 claims description 3
- 239000004372 Polyvinyl alcohol Substances 0.000 claims description 3
- 229920002125 Sokalan® Polymers 0.000 claims description 3
- 229920002472 Starch Polymers 0.000 claims description 3
- 229920000615 alginic acid Polymers 0.000 claims description 3
- 235000010443 alginic acid Nutrition 0.000 claims description 3
- 150000001336 alkenes Chemical class 0.000 claims description 3
- 150000001345 alkine derivatives Chemical class 0.000 claims description 3
- 125000003118 aryl group Chemical group 0.000 claims description 3
- 229920002678 cellulose Polymers 0.000 claims description 3
- 239000001913 cellulose Substances 0.000 claims description 3
- 235000010980 cellulose Nutrition 0.000 claims description 3
- 230000005670 electromagnetic radiation Effects 0.000 claims description 3
- 230000004927 fusion Effects 0.000 claims description 3
- 125000000959 isobutyl group Chemical group [H]C([H])([H])C([H])(C([H])([H])[H])C([H])([H])* 0.000 claims description 3
- 125000001449 isopropyl group Chemical group [H]C([H])([H])C([H])(*)C([H])([H])[H] 0.000 claims description 3
- 229920000620 organic polymer Polymers 0.000 claims description 3
- 229920002401 polyacrylamide Polymers 0.000 claims description 3
- 239000004584 polyacrylic acid Substances 0.000 claims description 3
- 229920001223 polyethylene glycol Polymers 0.000 claims description 3
- 229920002451 polyvinyl alcohol Polymers 0.000 claims description 3
- 235000019698 starch Nutrition 0.000 claims description 3
- 239000008107 starch Substances 0.000 claims description 3
- 125000000999 tert-butyl group Chemical group [H]C([H])([H])C(*)(C([H])([H])[H])C([H])([H])[H] 0.000 claims description 3
- 229910001428 transition metal ion Inorganic materials 0.000 claims description 3
- 230000003213 activating effect Effects 0.000 claims description 2
- 238000010668 complexation reaction Methods 0.000 claims description 2
- 230000035699 permeability Effects 0.000 claims description 2
- 230000001960 triggered effect Effects 0.000 claims description 2
- 230000009849 deactivation Effects 0.000 claims 1
- 235000018102 proteins Nutrition 0.000 description 43
- 239000000243 solution Substances 0.000 description 30
- 230000027455 binding Effects 0.000 description 28
- PXHVJJICTQNCMI-UHFFFAOYSA-N nickel Substances [Ni] PXHVJJICTQNCMI-UHFFFAOYSA-N 0.000 description 28
- HEMHJVSKTPXQMS-UHFFFAOYSA-M Sodium hydroxide Chemical compound [OH-].[Na+] HEMHJVSKTPXQMS-UHFFFAOYSA-M 0.000 description 18
- 239000003446 ligand Substances 0.000 description 15
- 108091003079 Bovine Serum Albumin Proteins 0.000 description 14
- 229940098773 bovine serum albumin Drugs 0.000 description 14
- KCXVZYZYPLLWCC-UHFFFAOYSA-N EDTA Chemical compound OC(=O)CN(CC(O)=O)CCN(CC(O)=O)CC(O)=O KCXVZYZYPLLWCC-UHFFFAOYSA-N 0.000 description 11
- 238000011068 loading method Methods 0.000 description 11
- 238000010168 coupling process Methods 0.000 description 10
- 230000008878 coupling Effects 0.000 description 9
- 238000005859 coupling reaction Methods 0.000 description 9
- 238000012360 testing method Methods 0.000 description 9
- 229920002521 macromolecule Polymers 0.000 description 8
- 241000287828 Gallus gallus Species 0.000 description 7
- 238000002347 injection Methods 0.000 description 7
- 239000007924 injection Substances 0.000 description 7
- DTQVDTLACAAQTR-UHFFFAOYSA-N Trifluoroacetic acid Chemical compound OC(=O)C(F)(F)F DTQVDTLACAAQTR-UHFFFAOYSA-N 0.000 description 6
- 229910052759 nickel Inorganic materials 0.000 description 6
- LMDZBCPBFSXMTL-UHFFFAOYSA-N 1-ethyl-3-(3-dimethylaminopropyl)carbodiimide Chemical compound CCN=C=NCCCN(C)C LMDZBCPBFSXMTL-UHFFFAOYSA-N 0.000 description 5
- RTZKZFJDLAIYFH-UHFFFAOYSA-N Diethyl ether Chemical compound CCOCC RTZKZFJDLAIYFH-UHFFFAOYSA-N 0.000 description 5
- NQTADLQHYWFPDB-UHFFFAOYSA-N N-Hydroxysuccinimide Chemical compound ON1C(=O)CCC1=O NQTADLQHYWFPDB-UHFFFAOYSA-N 0.000 description 5
- 239000002244 precipitate Substances 0.000 description 5
- 238000004458 analytical method Methods 0.000 description 4
- 230000004888 barrier function Effects 0.000 description 4
- 230000015572 biosynthetic process Effects 0.000 description 4
- 239000007853 buffer solution Substances 0.000 description 4
- 229910001453 nickel ion Inorganic materials 0.000 description 4
- 239000012146 running buffer Substances 0.000 description 4
- 239000000126 substance Substances 0.000 description 4
- 238000003786 synthesis reaction Methods 0.000 description 4
- XLYOFNOQVPJJNP-UHFFFAOYSA-N water Substances O XLYOFNOQVPJJNP-UHFFFAOYSA-N 0.000 description 4
- QTBSBXVTEAMEQO-UHFFFAOYSA-N Acetic acid Chemical compound CC(O)=O QTBSBXVTEAMEQO-UHFFFAOYSA-N 0.000 description 3
- 102000016943 Muramidase Human genes 0.000 description 3
- 108010014251 Muramidase Proteins 0.000 description 3
- 108010062010 N-Acetylmuramoyl-L-alanine Amidase Proteins 0.000 description 3
- 241000080590 Niso Species 0.000 description 3
- 230000004913 activation Effects 0.000 description 3
- 230000009920 chelation Effects 0.000 description 3
- 230000000694 effects Effects 0.000 description 3
- 229960000274 lysozyme Drugs 0.000 description 3
- 239000004325 lysozyme Substances 0.000 description 3
- 235000010335 lysozyme Nutrition 0.000 description 3
- 238000004519 manufacturing process Methods 0.000 description 3
- 239000000203 mixture Substances 0.000 description 3
- 230000009871 nonspecific binding Effects 0.000 description 3
- 230000003287 optical effect Effects 0.000 description 3
- 125000002924 primary amino group Chemical group [H]N([H])* 0.000 description 3
- 238000003756 stirring Methods 0.000 description 3
- ITMCEJHCFYSIIV-UHFFFAOYSA-N triflic acid Chemical compound OS(=O)(=O)C(F)(F)F ITMCEJHCFYSIIV-UHFFFAOYSA-N 0.000 description 3
- HZAXFHJVJLSVMW-UHFFFAOYSA-N 2-Aminoethan-1-ol Chemical group NCCO HZAXFHJVJLSVMW-UHFFFAOYSA-N 0.000 description 2
- 238000002965 ELISA Methods 0.000 description 2
- KDXKERNSBIXSRK-YFKPBYRVSA-N L-lysine Chemical compound NCCCC[C@H](N)C(O)=O KDXKERNSBIXSRK-YFKPBYRVSA-N 0.000 description 2
- KDLHZDBZIXYQEI-UHFFFAOYSA-N Palladium Chemical compound [Pd] KDLHZDBZIXYQEI-UHFFFAOYSA-N 0.000 description 2
- 102000007056 Recombinant Fusion Proteins Human genes 0.000 description 2
- 108010008281 Recombinant Fusion Proteins Proteins 0.000 description 2
- FAPWRFPIFSIZLT-UHFFFAOYSA-M Sodium chloride Chemical compound [Na+].[Cl-] FAPWRFPIFSIZLT-UHFFFAOYSA-M 0.000 description 2
- 238000004113 cell culture Methods 0.000 description 2
- 230000008859 change Effects 0.000 description 2
- 238000004140 cleaning Methods 0.000 description 2
- 239000008139 complexing agent Substances 0.000 description 2
- 239000010949 copper Substances 0.000 description 2
- 239000012228 culture supernatant Substances 0.000 description 2
- 239000003480 eluent Substances 0.000 description 2
- 102000037865 fusion proteins Human genes 0.000 description 2
- 108020001507 fusion proteins Proteins 0.000 description 2
- 150000004676 glycans Chemical class 0.000 description 2
- 230000002427 irreversible effect Effects 0.000 description 2
- 230000007935 neutral effect Effects 0.000 description 2
- FEMOMIGRRWSMCU-UHFFFAOYSA-N ninhydrin Chemical compound C1=CC=C2C(=O)C(O)(O)C(=O)C2=C1 FEMOMIGRRWSMCU-UHFFFAOYSA-N 0.000 description 2
- 229920001282 polysaccharide Polymers 0.000 description 2
- 239000005017 polysaccharide Substances 0.000 description 2
- 125000006239 protecting group Chemical group 0.000 description 2
- 239000012460 protein solution Substances 0.000 description 2
- 230000001172 regenerating effect Effects 0.000 description 2
- JVEUTCWLEJSEDI-PXYINDEMSA-N (2s)-2,6-diamino-7-oxo-7-phenylmethoxyheptanoic acid Chemical compound OC(=O)[C@@H](N)CCCC(N)C(=O)OCC1=CC=CC=C1 JVEUTCWLEJSEDI-PXYINDEMSA-N 0.000 description 1
- 125000001140 1,4-phenylene group Chemical group [H]C1=C([H])C([*:2])=C([H])C([H])=C1[*:1] 0.000 description 1
- JKMHFZQWWAIEOD-UHFFFAOYSA-N 2-[4-(2-hydroxyethyl)piperazin-1-yl]ethanesulfonic acid Chemical compound OCC[NH+]1CCN(CCS([O-])(=O)=O)CC1 JKMHFZQWWAIEOD-UHFFFAOYSA-N 0.000 description 1
- MONMFXREYOKQTI-UHFFFAOYSA-N 2-bromopropanoic acid Chemical compound CC(Br)C(O)=O MONMFXREYOKQTI-UHFFFAOYSA-N 0.000 description 1
- 125000000954 2-hydroxyethyl group Chemical group [H]C([*])([H])C([H])([H])O[H] 0.000 description 1
- QCVGEOXPDFCNHA-UHFFFAOYSA-N 5,5-dimethyl-2,4-dioxo-1,3-oxazolidine-3-carboxamide Chemical compound CC1(C)OC(=O)N(C(N)=O)C1=O QCVGEOXPDFCNHA-UHFFFAOYSA-N 0.000 description 1
- 108090001008 Avidin Proteins 0.000 description 1
- 238000009010 Bradford assay Methods 0.000 description 1
- RYGMFSIKBFXOCR-UHFFFAOYSA-N Copper Chemical compound [Cu] RYGMFSIKBFXOCR-UHFFFAOYSA-N 0.000 description 1
- 108010000912 Egg Proteins Proteins 0.000 description 1
- 102000002322 Egg Proteins Human genes 0.000 description 1
- 239000004593 Epoxy Substances 0.000 description 1
- 239000007995 HEPES buffer Substances 0.000 description 1
- 108010093488 His-His-His-His-His-His Proteins 0.000 description 1
- 235000019766 L-Lysine Nutrition 0.000 description 1
- 239000004472 Lysine Substances 0.000 description 1
- VEQPNABPJHWNSG-UHFFFAOYSA-N Nickel(2+) Chemical compound [Ni+2] VEQPNABPJHWNSG-UHFFFAOYSA-N 0.000 description 1
- 108010090804 Streptavidin Proteins 0.000 description 1
- 239000002253 acid Substances 0.000 description 1
- 238000010306 acid treatment Methods 0.000 description 1
- 150000001299 aldehydes Chemical class 0.000 description 1
- IYABWNGZIDDRAK-UHFFFAOYSA-N allene Chemical group C=C=C IYABWNGZIDDRAK-UHFFFAOYSA-N 0.000 description 1
- 238000005349 anion exchange Methods 0.000 description 1
- 239000008346 aqueous phase Substances 0.000 description 1
- 230000008901 benefit Effects 0.000 description 1
- FFBHFFJDDLITSX-UHFFFAOYSA-N benzyl N-[2-hydroxy-4-(3-oxomorpholin-4-yl)phenyl]carbamate Chemical compound OC1=C(NC(=O)OCC2=CC=CC=C2)C=CC(=C1)N1CCOCC1=O FFBHFFJDDLITSX-UHFFFAOYSA-N 0.000 description 1
- 238000007413 biotinylation Methods 0.000 description 1
- 230000006287 biotinylation Effects 0.000 description 1
- 239000000872 buffer Substances 0.000 description 1
- 125000000837 carbohydrate group Chemical group 0.000 description 1
- 125000002915 carbonyl group Chemical group [*:2]C([*:1])=O 0.000 description 1
- 150000001768 cations Chemical class 0.000 description 1
- 239000003638 chemical reducing agent Substances 0.000 description 1
- 229910017052 cobalt Inorganic materials 0.000 description 1
- 239000010941 cobalt Substances 0.000 description 1
- GUTLYIVDDKVIGB-UHFFFAOYSA-N cobalt atom Chemical compound [Co] GUTLYIVDDKVIGB-UHFFFAOYSA-N 0.000 description 1
- 239000000084 colloidal system Substances 0.000 description 1
- 230000000536 complexating effect Effects 0.000 description 1
- 150000001875 compounds Chemical class 0.000 description 1
- 229910052802 copper Inorganic materials 0.000 description 1
- 230000002596 correlated effect Effects 0.000 description 1
- 238000009792 diffusion process Methods 0.000 description 1
- 235000014103 egg white Nutrition 0.000 description 1
- 210000000969 egg white Anatomy 0.000 description 1
- 125000003700 epoxy group Chemical group 0.000 description 1
- CCIVGXIOQKPBKL-UHFFFAOYSA-M ethanesulfonate Chemical compound CCS([O-])(=O)=O CCIVGXIOQKPBKL-UHFFFAOYSA-M 0.000 description 1
- 150000002169 ethanolamines Chemical class 0.000 description 1
- WBJINCZRORDGAQ-UHFFFAOYSA-N ethyl formate Chemical compound CCOC=O WBJINCZRORDGAQ-UHFFFAOYSA-N 0.000 description 1
- DNJIEGIFACGWOD-UHFFFAOYSA-N ethyl mercaptane Natural products CCS DNJIEGIFACGWOD-UHFFFAOYSA-N 0.000 description 1
- 238000011156 evaluation Methods 0.000 description 1
- 238000002474 experimental method Methods 0.000 description 1
- 239000013604 expression vector Substances 0.000 description 1
- 238000010353 genetic engineering Methods 0.000 description 1
- 239000011521 glass Substances 0.000 description 1
- PCHJSUWPFVWCPO-UHFFFAOYSA-N gold Chemical compound [Au] PCHJSUWPFVWCPO-UHFFFAOYSA-N 0.000 description 1
- 229910052737 gold Inorganic materials 0.000 description 1
- 239000010931 gold Substances 0.000 description 1
- 238000005984 hydrogenation reaction Methods 0.000 description 1
- 125000002887 hydroxy group Chemical group [H]O* 0.000 description 1
- 230000001900 immune effect Effects 0.000 description 1
- 238000003018 immunoassay Methods 0.000 description 1
- 239000012535 impurity Substances 0.000 description 1
- 230000009878 intermolecular interaction Effects 0.000 description 1
- 125000005647 linker group Chemical group 0.000 description 1
- WPBNNNQJVZRUHP-UHFFFAOYSA-L manganese(2+);methyl n-[[2-(methoxycarbonylcarbamothioylamino)phenyl]carbamothioyl]carbamate;n-[2-(sulfidocarbothioylamino)ethyl]carbamodithioate Chemical compound [Mn+2].[S-]C(=S)NCCNC([S-])=S.COC(=O)NC(=S)NC1=CC=CC=C1NC(=S)NC(=O)OC WPBNNNQJVZRUHP-UHFFFAOYSA-L 0.000 description 1
- 239000000463 material Substances 0.000 description 1
- LGQLOGILCSXPEA-UHFFFAOYSA-L nickel sulfate Chemical group [Ni+2].[O-]S([O-])(=O)=O LGQLOGILCSXPEA-UHFFFAOYSA-L 0.000 description 1
- 229910000363 nickel(II) sulfate Inorganic materials 0.000 description 1
- 230000004962 physiological condition Effects 0.000 description 1
- 229920001184 polypeptide Polymers 0.000 description 1
- 238000001556 precipitation Methods 0.000 description 1
- 239000000047 product Substances 0.000 description 1
- 125000004805 propylene group Chemical group [H]C([H])([H])C([H])([*:1])C([H])([H])[*:2] 0.000 description 1
- 238000000425 proton nuclear magnetic resonance spectrum Methods 0.000 description 1
- 230000002285 radioactive effect Effects 0.000 description 1
- 230000002441 reversible effect Effects 0.000 description 1
- 229920006395 saturated elastomer Polymers 0.000 description 1
- 239000011780 sodium chloride Substances 0.000 description 1
- 239000012086 standard solution Substances 0.000 description 1
- 239000011550 stock solution Substances 0.000 description 1
- 125000003396 thiol group Chemical group [H]S* 0.000 description 1
- 125000000391 vinyl group Chemical group [H]C([*])=C([H])[H] 0.000 description 1
- DGVVWUTYPXICAM-UHFFFAOYSA-N β‐Mercaptoethanol Chemical compound OCCS DGVVWUTYPXICAM-UHFFFAOYSA-N 0.000 description 1
Classifications
-
- G—PHYSICS
- G01—MEASURING; TESTING
- G01N—INVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
- G01N33/00—Investigating or analysing materials by specific methods not covered by groups G01N1/00 - G01N31/00
- G01N33/48—Biological material, e.g. blood, urine; Haemocytometers
- G01N33/50—Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing
- G01N33/53—Immunoassay; Biospecific binding assay; Materials therefor
- G01N33/543—Immunoassay; Biospecific binding assay; Materials therefor with an insoluble carrier for immobilising immunochemicals
- G01N33/54366—Apparatus specially adapted for solid-phase testing
- G01N33/54373—Apparatus specially adapted for solid-phase testing involving physiochemical end-point determination, e.g. wave-guides, FETS, gratings
-
- G—PHYSICS
- G01—MEASURING; TESTING
- G01N—INVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
- G01N33/00—Investigating or analysing materials by specific methods not covered by groups G01N1/00 - G01N31/00
- G01N33/48—Biological material, e.g. blood, urine; Haemocytometers
- G01N33/50—Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing
- G01N33/53—Immunoassay; Biospecific binding assay; Materials therefor
- G01N33/543—Immunoassay; Biospecific binding assay; Materials therefor with an insoluble carrier for immobilising immunochemicals
-
- B—PERFORMING OPERATIONS; TRANSPORTING
- B01—PHYSICAL OR CHEMICAL PROCESSES OR APPARATUS IN GENERAL
- B01D—SEPARATION
- B01D15/00—Separating processes involving the treatment of liquids with solid sorbents; Apparatus therefor
- B01D15/08—Selective adsorption, e.g. chromatography
-
- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07C—ACYCLIC OR CARBOCYCLIC COMPOUNDS
- C07C229/00—Compounds containing amino and carboxyl groups bound to the same carbon skeleton
- C07C229/02—Compounds containing amino and carboxyl groups bound to the same carbon skeleton having amino and carboxyl groups bound to acyclic carbon atoms of the same carbon skeleton
- C07C229/04—Compounds containing amino and carboxyl groups bound to the same carbon skeleton having amino and carboxyl groups bound to acyclic carbon atoms of the same carbon skeleton the carbon skeleton being acyclic and saturated
- C07C229/26—Compounds containing amino and carboxyl groups bound to the same carbon skeleton having amino and carboxyl groups bound to acyclic carbon atoms of the same carbon skeleton the carbon skeleton being acyclic and saturated having more than one amino group bound to the carbon skeleton, e.g. lysine
Definitions
- the invention relates to the study of
- Macromolecules e.g. (Poly) peptide (poly) peptide or (poly) peptide-DNA interactions have been reported in the past
- a recently developed method is based on the optical phenomenon of surface plasmon resonance ("Surface Plasmon Resonance", SPR).
- SPR Surface Plasmon Resonance
- Glass support which has a gold layer on one side, to which a hydrogel matrix made of carboxymethyl-dextran is covalently attached via a barrier layer provided with linker groups
- the hydrogel matrix serves on the one hand
- hydrogel matrix is generally a (poly) peptide, the following methods have hitherto been used on the hydrogel matrix:
- Process 1) is associated with the risk that, due to the non-directional chemical reaction between the hydrogel-forming substance and the
- (Poly) peptide takes place, the biological and / or biophysical properties of which are influenced in a way that is difficult or impossible to define. That can have the consequence that the immobilized (poly) peptide is not or not completely in its native, biologically active form because, for example, the
- Section of the molecule that is to interact with the reactant has been blocked by a chemical grouping or has become inaccessible due to a change in the conformation of the molecule.
- Sandwich immunoassays e.g. in the ELISA (Enzyme linked Immunosorbent Assay) technique.
- ELISA Enzyme linked Immunosorbent Assay
- the present invention was based on the object of a method for investigating the interaction of (poly) peptides with reactants using SPR provide the disadvantages of the known
- affinity peptides Use of genetic engineering methods as fusion proteins with sequence segments that have high affinity for a ligand (so-called affinity peptides)
- Immobilized metal chelate affinity chromatography is a wide one
- nitrilotriacetic acid derivatives have particularly advantageous properties, which include the extremely high affinity for certain metal ions, for example Cu 2+ , Ni 2+ or Zn 2+ . So far, this method has been widely used using nickel as the metal ion and
- Nitrilotriacetic acid as a complexing agent in the
- the present invention thus relates to a method for investigating the interaction of a (poly) peptide with a reaction partner by means of a
- Biosensor unit in which the through the
- Interaction triggered surface plasmon resonance is determined in a metallic layer at the interface of two media which are permeable to electromagnetic radiation and have a different refractive index, the medium with a lower refractive index being an aqueous medium in which the (poly) peptide is present in an immobilized form and with the
- Reaction partner is brought into contact.
- the invention relates to a biosensor unit for examining the
- Reaction partner by determining the surface plasmon resonance in a metallic layer at the interface of two media with different permeability for electromagnetic radiation
- Refractive index is an aqueous medium.
- Biosensor unit is characterized in that a chelating agent, possibly in a form complexed with a metal ion, is bound to its surface facing the aqueous medium.
- the aqueous phase is a biocompatible porous matrix, in particular a hydrogel.
- hydrogel formers there is basically no restriction with regard to the hydrogel formers, provided that they are suitable for the SPR process, especially with regard to the required diffusion of the biomolecules in the
- Hydrogel matrix is basically given.
- suitable hydrogel formers are polysaccharides, such as agarose, dextran, carragen, alginates, starch, cellulose or derivatives of these polysaccharides, such as e.g.
- Carboxymethyl derivatives or water-swellable organic polymers, such as polyvinyl alcohol, polyacrylic acid,
- Polyacrylamide or polyethylene glycol are examples of Polyacrylamide or polyethylene glycol.
- a particularly suitable hydrogel consists of dextran, which with regard to the covalent binding of the
- Hydrogel layer and its binding to the metal layer, which is optionally carried out via an organic barrier layer, was among others. in PCT application WO 90/05303 and by Löfas and Johnsson, 1990.
- the chelating agent is bound to the reactive groups of the hydrogel.
- the hydrogel former is a dextran which has carboxymethyl groups as reactive groups.
- the (poly) peptide is a fusion (poly) peptide which, in addition to its biologically active section, has an affinity peptide which contains at least two adjacent histidine residues.
- the chelating agent is on
- NTA Nitrilotriacetic acid
- R can be an alkylene bridge of the type (CH 2 ) n - which can be substituted or unsubstituted, with the proviso that the substituent does not adversely affect the function of the chelating agent, and n is an integer 1, 2, 3, 4, 5, 6, 7, 8, 9 or 10 means, the alkylene group being of sufficient size
- R can mean an aromatic bridge member which consists of one or more one or more
- polynuclear aromatics which can optionally also be an aromatic heterocycle, is built up, or in which R can mean an aralkyl bridge member in which the aromatic part either directly or via an alkyl group of the type (CH 2 ) n -, in which n is a whole Number 1, 2, 3, 4 or 5 may mean to which Y or to which the ⁇ -C atom adjacent to the carboxyl group may be bound, and in which Y is a reactive group, in particular an NH 2 or an SH group.
- R can mean an aralkyl bridge member in which the aromatic part either directly or via an alkyl group of the type (CH 2 ) n -, in which n is a whole Number 1, 2, 3, 4 or 5 may mean to which Y or to which the ⁇ -C atom adjacent to the carboxyl group may be bound, and in which Y is a reactive group, in particular an NH 2 or an SH group.
- R examples are methylene, ethylene, n-propylene or iso-propylene or o-, m-, p-phenylene or ⁇ , ⁇ '-naphthylene.
- the NTA derivative can also have the general formula Y-R1-CH (COOH) -N (CHR2COOH) 2 , in which R1 is a group with that indicated for R.
- R2 can be an alkyl group of the type CH 3 (CH 2 ) n -, which is substituted, for example with OH or Cl, or may be unsubstituted, and n may be an integer 1, 2, 3, 4 or 5, or where R2 may be a branched alkyl group such as iso-propyl, t-butyl or iso-butyl, or where R2 is a aromatic bridge member of the meaning given for R, and wherein Y is a reactive group, in particular an NH 2 ⁇ or an SH group.
- R and R1 are selected in such a way that on the one hand the ability to complex in comparison to
- unbound NTA is influenced as little as possible and on the other hand the distance to the surface of the
- Biosensor unit is small enough not to irritate the SPR phenomena.
- R2 is selected so that the
- the ability of the chelating agent to complex with the metal ion to be chelated and with the substance to be investigated is not adversely affected.
- Ligands usually a His (6) modified
- Y is a reactive group with which the chelating agent contacts the surface of the biosensor unit, in particular the reactive groups contained in the hydrogel matrix, is bound.
- the reactive group of the chelating agent is thus placed on the reactive group surface of the biosensor unit, in particular the hydrogel matrix;
- a particularly preferred reactive group Y is an NH 2 group attached to the modified ones
- Carboxymethyl groups of dextran binds.
- Other reactive groups Y which are suitable for covalent bonding, are SH groups, which are stable
- reducing agents e.g. Mercaptoethanol, which is often used in the purification or synthesis of
- the chelating agent can be reacted via its reactive groups using methods known for the coupling of (poly) peptides, e.g. by means of N-hydroxysuccinimide (NHS) and N-ethyl-N '- (dimethylaminopropyl) carbodiimide (EDC) (see e.g. Cuatrecasas and Parikh, 1972).
- NHS N-hydroxysuccinimide
- EDC dimethylaminopropyl carbodiimide
- Transition metal ions are primarily suitable as metal ions, preferably
- Transition metal ions of the fourth period are particularly preferred, of which Ni 2+ is particularly preferred.
- NTA derivatives are the N- (5-amino-1-carboxypentyl) described by Hochuli et al., 1987
- His-Tag proteins are used (so-called “His-Tag proteins”), reference is made to the European patent application EP-A-282 042; Examples include (His) 6 proteins in which the affinity peptide has six histidine residues side by side.
- Biosensor chips possibly via a reactive one
- hydrogel matrix is generally preferred, above all because its structure makes it a structure that is quite similar to the physiological conditions inside the cell and therefore for the
- the present invention has the decisive advantage that the biosensor surface can be completely regenerated. This makes it possible to carry out series tests under comparable conditions.
- the biosensor unit according to the invention fulfills the following conditions imposed on the regeneration: 1) The (poly) peptide bound to the metal chelate can be completely removed. 2) When reloaded, the surface of the biosensor unit does not lose any binding capacity for a (poly) peptide to be immobilized.
- a metal ion-saturated chelate surface which contains a ligand, e.g. a His (6) protein has bound
- several options are available. On the one hand, the ligand can pass through
- Acid treatment e.g. 10 mM acetic acid
- the metal ion load remains largely stable, depending on the metal ion used.
- the bound protein can be combined with the metal ion by adding another strong chelating agent, e.g. 100 mM EDTA, from the
- the stability of the metal ion bond to the chelating agent must be determined in individual cases and is, among other things. depends on the stability of the ligand metal ion complex.
- the method of regenerating the chelate surface with other chelating agents is preferable to the first method, considering the reproducibility of the method.
- Macromolecule with affinity for ligand 1, but not for the metal chelate surface can be achieved under conditions that remove ligand 2
- Affinity chromatography can be applied.
- the present invention can advantageously be used for biochemical cleaning
- the invention relates to a biosensor kit for investigating the interaction of a (poly) peptide with a reaction partner using SPR.
- the kit contains an SPR biosensor unit in a first one, a chelating agent in another container, and a salt for complexing with the chelating agent in another container
- Container a reagent for the regeneration of the surface and optionally one or more reference proteins in one or more further containers.
- a surface of the biosensor unit is preferably a hydrogel layer. The is convenient
- Chelating agent in the form of a deep-frozen solution the concentration and buffer solution being switched off with regard to the coupling to the surface of the biosensor unit.
- Preferred chelating agents are
- Nitrilotriacetic acid derivatives especially N- (5-amino- 1-carboxypentyl) iminodiacetic acid and
- the metal salt is preferably nickel sulfate, preferably in the form of a stock solution which can be diluted with a view to the desired degree of loading of the surface.
- a surface of the biosensor unit consists of a hydrogel with reactive groups, in particular of a carboxymethylated dextran, these are
- N-ethyl-N '- (dimethylaminopropyl) carbodiimide which are preferably in the form of frozen solutions which are suitable for activation in terms of concentration and buffer solution.
- the reagent for deactivating the N-hydroxysuccinimide groups remaining after coupling of the (poly) peptide to the biosensor surface is ethanolamine in a suitable concentration and
- Buffer solution preferably also in frozen form.
- the reagent for regenerating the biosensor surface is preferably a chelating agent, in particular EDTA.
- test proteins which may be present in further containers preferably have an affinity peptide with several histidine residues and are in the form of
- Hydrogel layer from the bisosensor unit appears to be difficult to carry out in a reproducible manner.
- Biosensor unit can be used.
- the chelating agent was immobilized according to the method recommended by the manufacturer of the biosensor chips carried out. Because of the low relative
- BSA bovine serum albumin
- Chelating agent modified biosensor chip surface is very small, no binding to the modified surface was observed.
- the binding capacity of the surface for the test protein is, as shown in Example 4, directly correlated with that
- Nickel ion concentration used for loading The setting of the nickel ion concentration enables simple adjustment of the
- the present invention relates to the nitrilotriacetic acid derivative of the formula N ⁇ , N ⁇ -Di (1-carboxyethyl) -2,6-diaminohexanoic acid.
- This chelation can be like the well known
- Nitrilotriacetic acid derivatives also for the
- immobilized metal chelate affinity chromatography can be used to purify proteins and peptides.
- Fig. 1 Immobilization of N- (5-amino-1-carboxypentyl) iminodiacetic acid on the dextran surface of a biosensor unit
- Fig. 2 Indirect determination of the loading of the
- Fig. 3 Regeneration with bovine serum albumin
- Fig. 4 Determination of the non-specific binding of a
- Trifluoromethanesulfonic acid (Merck) was slowly added dropwise and the mixture was stirred at room temperature for 1 hour. The precipitate formed was separated off, the solution was mixed with 30 ml of water and almost to dryness
- the solution was added dropwise to 10 volumes of diethyl ether for 1.5 h at room temperature.
- the precipitation was washed 3 times with ether and dried.
- the precipitate formed was separated off, the solution was mixed with
- HBS buffer 10 mM HEPES (2- [4- (2-hydroxyethyl) -1-piperazino] ethanesulfonic acid), 150 mM NaCl and 5 mM MgCl 2 , pH 7.4) at 25 ° C
- a CM5 biosensor chip was used for immobilization
- This biosensor unit has a hydrogel surface made of carboxymethylated dextran.
- the activation of the hydrogel surface was carried out by injecting 35 ⁇ l of a 0.05 M N-hydroxysuccininimide (NHS) /0.2 M N-ethyl-N '- (dimethylaminopropyl) carbodiimide (EDC) solution (Flow rate 5 ⁇ l / min).
- NHS N-hydroxysuccininimide
- EDC dimethylaminopropyl
- the surface was 35 ul of a solution of 15 mg / ml
- N- (5-Amino-1-carboxypentyl) iminodiacetic acid in 1 M NaOH was injected at a flow rate of 3 ul / min.
- Unsaturated surface binding sites were found by injecting 35 ⁇ l of a 1 M solution of
- Immobilization is indicated in the figure.
- Bovine serum albumin (BSA, Sigma) was injected into 100 ml running buffer.
- the sensorgram (Fig. 2) shows
- Running buffer injected and regenerated with EDTA (ethylenediamine-N, N, N ', N'-tetraacetic acid). For calculating 3 (baseline,
- Injection maximum and bound protein t 1) the resonance was 30 s before the injection of bovine serum albumin (baseline), 30 s before the end of the injection of the
- Bovine serum albumin injection maximum
- Example 1 To determine the non-specific binding of the protein to the surface, the surface described in Example 1 was regenerated with EDTA, as described in Example 3, and 20 ⁇ l of a test protein solution were injected at a flow rate of 5 ⁇ l / min. After renewed regeneration of the surface with EDTA and loading with
- Binding behavior of different proteins were 40 ⁇ l of solutions (10 ⁇ g / ml in running buffer) of a chicken protein in the sequence listing
- the protein was further purified via a
- Bovine serum albumin in contrast to the His (6) - modified chicken protein, saturates the
- the surface loaded with the His (6) -modified chicken protein for saturation can be used to search for interacting with this protein
- Proteins e.g. Cell culture supernatants from
- Cell culture supernatants from different cell lines are injected.
- the binding of an interacting partner can be demonstrated by increasing the resonance after the injection.
- the sensorgram is shown in FIG. 7.
- the surface shows a binding behavior comparable to that described in Example 2 and modified with N- (5-amino-1-carboxypentyl) iminodiacetic acid.
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Abstract
L'invention concerne un procédé et une unité de biodétection pouvant être régénérée, ainsi que des matériels appropriés, pour la recherche de l'interaction entre des biomolécules par résonance de plasmon superficiel (SPR). Un des réactifs, un (poly)peptide, est couplé au moyen d'un chélate métallique à la surface de l'unité de biodétection. Les agents de formation de chélate utilisés sont, de préférence, des dérivés d'acide nitrilonitriacétique auxquels peuvent être liées des protéines présentant un peptide d'affinité contenant des radicaux histidine.
Applications Claiming Priority (3)
| Application Number | Priority Date | Filing Date | Title |
|---|---|---|---|
| DE4433980A DE4433980C2 (de) | 1994-09-23 | 1994-09-23 | Verfahren und Biosensorhit zur Untersuchung der Wechselwirkung von Biomolekülen mittels Oberflächen-Plasma-Resonanz |
| DE4433980 | 1994-09-23 | ||
| PCT/EP1995/003731 WO1996009547A2 (fr) | 1994-09-23 | 1995-09-21 | Procede de recherche de l'interaction entre des biomolecules par resonance de plasmon superficiel |
Publications (1)
| Publication Number | Publication Date |
|---|---|
| EP0784792A2 true EP0784792A2 (fr) | 1997-07-23 |
Family
ID=6528988
Family Applications (1)
| Application Number | Title | Priority Date | Filing Date |
|---|---|---|---|
| EP95933414A Ceased EP0784792A2 (fr) | 1994-09-23 | 1995-09-21 | Procede de recherche de l'interaction entre des biomolecules par resonance de plasmon superficiel |
Country Status (12)
| Country | Link |
|---|---|
| EP (1) | EP0784792A2 (fr) |
| JP (1) | JPH10505910A (fr) |
| KR (1) | KR970706494A (fr) |
| CN (1) | CN1158658A (fr) |
| AU (1) | AU3608995A (fr) |
| BR (1) | BR9509077A (fr) |
| CA (1) | CA2198615A1 (fr) |
| CO (1) | CO4410395A1 (fr) |
| DE (1) | DE4433980C2 (fr) |
| PL (1) | PL319354A1 (fr) |
| WO (1) | WO1996009547A2 (fr) |
| ZA (1) | ZA958024B (fr) |
Families Citing this family (15)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| US6107080A (en) * | 1996-04-25 | 2000-08-22 | Mcgill University | Biosensor device and method |
| US5955379A (en) * | 1996-04-25 | 1999-09-21 | Mcgill University | Biosensor device and method |
| US6130037A (en) * | 1996-04-25 | 2000-10-10 | Pence And Mcgill University | Biosensor device and method |
| US6165335A (en) | 1996-04-25 | 2000-12-26 | Pence And Mcgill University | Biosensor device and method |
| AU6883198A (en) * | 1997-04-24 | 1998-11-13 | American Home Products Corporation | Method for the identification and characterization of nuclear receptor ligands |
| IL141759A0 (en) * | 1998-09-03 | 2002-03-10 | Trellis Bioinformatics Inc | Multihued labels |
| AUPP856399A0 (en) * | 1999-02-08 | 1999-03-04 | Australian Membrane And Biotechnology Research Institute | Improved compounds for protein binding |
| US6787368B1 (en) | 1999-03-02 | 2004-09-07 | Helix Biopharma Corporation | Biosensor method for detecting analytes in a liquid |
| WO2005038442A1 (fr) * | 2003-10-16 | 2005-04-28 | Kabushiki Kaisha Nard Kenkyusho | Procede de mesure de la resonance du plasmon de surface et compose de metal noble a utiliser dans ce procede |
| US7804592B2 (en) | 2003-10-16 | 2010-09-28 | Nard Institute, Ltd. | Method for measuring a surface plasmon resonance and noble metal compound used for the same |
| CN101261226B (zh) * | 2007-03-08 | 2010-12-08 | 北京宏荣博曼生物科技有限责任公司 | 一种基于聚乙二醇的表面等离子共振仪芯片 |
| JP2010197046A (ja) * | 2007-05-28 | 2010-09-09 | Tanaka Holdings Kk | バイオセンサー |
| EP2015071A1 (fr) | 2007-07-13 | 2009-01-14 | FUJIFILM Corporation | Support, son procédé de production, bioréacteur et puce pour analyse par résonance à plasmons de surface |
| KR100953558B1 (ko) | 2007-12-12 | 2010-04-21 | 한국전자통신연구원 | 표면 플라즈몬 공명을 이용한 ps-spcl 탐색 장치 및방법 |
| CN114797804B (zh) * | 2022-03-29 | 2023-08-04 | 翌圣生物科技(上海)股份有限公司 | 一种具有长连接臂的nta色谱介质及其制备方法 |
Family Cites Families (8)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| US4569794A (en) * | 1984-12-05 | 1986-02-11 | Eli Lilly And Company | Process for purifying proteins and compounds useful in such process |
| CA1304886C (fr) * | 1986-07-10 | 1992-07-07 | Heinz Dobeli | Resines chelatant des metaux |
| IL85137A (en) * | 1987-01-21 | 1992-02-16 | Ares Serono Res & Dev Ltd | Method of assaying for a ligand using surface plasmon resonance effect |
| CA1340522C (fr) * | 1987-03-10 | 1999-05-04 | Heinz Dobeli | Proteins hybrides renfermant des histidines voisines pour une purification amelioree |
| DE58905660D1 (de) * | 1988-04-25 | 1993-10-28 | Hoffmann La Roche | Diagnose-Hilfsmittel. |
| SE462454B (sv) * | 1988-11-10 | 1990-06-25 | Pharmacia Ab | Maetyta foer anvaendning i biosensorer |
| US5169936A (en) * | 1989-04-14 | 1992-12-08 | Biogen, Inc. | Protein purification on immobilized metal affinity resins effected by elution using a weak ligand |
| DE59106527D1 (de) * | 1990-11-14 | 1995-10-26 | Hoffmann La Roche | Immunsensorischer Wandler und Verfahren zu seiner Herstellung. |
-
1994
- 1994-09-23 DE DE4433980A patent/DE4433980C2/de not_active Expired - Fee Related
-
1995
- 1995-09-21 JP JP8510606A patent/JPH10505910A/ja active Pending
- 1995-09-21 CA CA002198615A patent/CA2198615A1/fr not_active Abandoned
- 1995-09-21 PL PL95319354A patent/PL319354A1/xx unknown
- 1995-09-21 WO PCT/EP1995/003731 patent/WO1996009547A2/fr not_active Ceased
- 1995-09-21 EP EP95933414A patent/EP0784792A2/fr not_active Ceased
- 1995-09-21 AU AU36089/95A patent/AU3608995A/en not_active Abandoned
- 1995-09-21 CO CO95043762A patent/CO4410395A1/es unknown
- 1995-09-21 CN CN95195182A patent/CN1158658A/zh active Pending
- 1995-09-21 BR BR9509077A patent/BR9509077A/pt not_active Application Discontinuation
- 1995-09-22 ZA ZA958024A patent/ZA958024B/xx unknown
-
1996
- 1996-09-21 KR KR1019970701787A patent/KR970706494A/ko not_active Withdrawn
Non-Patent Citations (1)
| Title |
|---|
| See references of WO9609547A2 * |
Also Published As
| Publication number | Publication date |
|---|---|
| CO4410395A1 (es) | 1997-01-09 |
| JPH10505910A (ja) | 1998-06-09 |
| KR970706494A (ko) | 1997-11-03 |
| BR9509077A (pt) | 1997-11-25 |
| WO1996009547A2 (fr) | 1996-03-28 |
| ZA958024B (en) | 1996-03-25 |
| CN1158658A (zh) | 1997-09-03 |
| WO1996009547A3 (fr) | 1996-05-30 |
| PL319354A1 (en) | 1997-08-04 |
| CA2198615A1 (fr) | 1996-03-28 |
| DE4433980A1 (de) | 1996-03-28 |
| DE4433980C2 (de) | 1996-08-22 |
| AU3608995A (en) | 1996-04-09 |
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