DK2788487T3 - Oligonukleotidanaloger målrettet mod human lmna - Google Patents
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Claims (13)
1. Antisense-oligonukleotid til reducering af ekspressionen af anormalt splejset LMNA-mRNA, hvilket oligonukleotid har en i det væsentlige uladet rygrad og består af morpholino-subunits og phorphorholdige intersubunit-bindinger, der kobler et morpholino-nitrogen på én subunit til et 5'-exocyklisk carbon på en tilstødende subunit, indeholder 25-40 baser og omfatter en målretningssekvens, der omfatter en hvilken som helst af SEQ ID NO: 4, 5, 10, 11, 13, 14 og 16, hvor antisense-oligonukleotidet er kovalent bundet til et cellepenetrerende peptid og en linkerdel, hvor linkerdelen er valgt blandt glycin, cystein, prolin, 6-aminohexansyre (Ahx), β-alanin (B) og Ahx-B, og det cellepenetrerende peptid er valgt blandt SEQ ID NO: 39-54.
2. Oligonukleotid ifølge krav 1, hvor morpholino-subunittene i oligonukleotidet er koblet ved hjælp af phorphorholdige bindinger i henhold til følgende struktur:
hvor Z er S eller O, X = NR4R2 eller OR6, Y = O eller NR7, Pj er en purin- eller pyrimidin-baseparrende del, og hver binding er valgt blandt: (a) en uladet binding (a) , hvor hver af R1, R2, R6 og R7 er valgt uafhængigt blandt hydrogen og en lavere alkyl; (bl) en kationisk binding (bl) , hvor X = NR1R2 og Y = O, og NR4R2 er en eventuelt substitueret piperazinogruppe, således at R1R2 = -CHRCHRN (R3) (R4) CHRCHR-, hvor hver R4 er H, CH3 eller nul, og R3 er valgt blandt H, en lavere alkyl, C(=NH)NH2, Z-L-NHC(=NH)NH2 og [C (O) CHR' NH] mH, hvor L, hvis Z er carbonyl (C (O) ) eller en direkte binding, er en eventuel linker med en længde på op til 18 atomer, der har bindinger valgt blandt alkyl, alkoxy og alkylamino, R' er en sidekæde på en naturligt forekommende aminosyre eller en én- eller to-carbonhomolog dertil, og m er 1 til 6; (b2) en kationisk binding (b2), hvor X = NR1R2 og Y = 0, R1 = H eller CH3 og R2 = LNR3R4R5, hvor L, R3 og R4 er som defineret ovenfor, og R5 er H, en lavere alkyl eller en lavere (alkoxy)alkyl; og (b3) en kationisk binding (b3), hvor Y = NR7 og X = OR6 og R7 = LNR3R4R5, hvor L, R3 og R4 og R5 er som defineret ovenfor, og R6 er H eller en lavere alkyl; og mindst én binding er valgt blandt kationisk binding (bl), (b2) og (b3).
3. Oligonukleotid ifølge krav 2, hvor (i) hver af R1 og R2 i bindinger af type (a) er methyl; (ii) mindst én binding er af type (bl), hvor hver R er H, R4 er H, CH3 eller et elektronpar, og R3 er valgt blandt H, CH3, C(=NH)NH2 og C (0)-L-NHC (=NH)NH2; (iii) mindst én binding er af type (bl), hvor hver R er H, R4 er et elektronpar, og R3 er valgt blandt C(=NH)NH2 og C(0)-L-NHC (=NH) NH2 ; (iv) mindst én binding er af type (bl), hvor hver R er H, R4 er et elektronpar, og R3 er valgt blandt C(=NH)NH2 og C(0)-L-NHC (=NH) NH2, og eventuelt hvor R3 er C (0)-L-NHC (NH) NH2, og L er et carbonhydrid med strukturen -(CH2)n-, hvor n er 1 til 12; eller (v) mindst én binding er af type (bl), hvor hver R er H, og hver af R3 og R4 er uafhængigt H eller CH3.
4. Oligonukleotid ifølge et hvilket som helst af kravene 1-3, hvor det cellepenetrerende peptid er bundet i dets C-terminal til 5'-enden eller 3'-enden af oligonukleotidet via linkerdelen.
5. Antisense-oligonukleotid, hvor oligonukleotidet reducerer ekspressionen af anormalt splejset LMNA-mRNA, hvilket oligonukleotid omfatter en rygrad, og rygraden omfatter en sekvens af morpholino-ringstrukturer, der er koblet ved hjælp af intersubunit-bindinger, hvilke intersubunit-bindinger kobler en 3'-ende af én morpholino-ringstruktur til en 5'-ende af en tilstødende morpholino-ringstruktur, hvor hver morpholino-ringstruktur er bundet til en baseparrende del, således at oligonukleotidet kan binde på en sekvensspecifik måde til en målnukleinsyre, som omfatter en målretningssekvens, der omfatter en hvilken som helst af SEQ ID NO: 4, 5, 10, 11, 13, 14 og 16, hvor intersubunit-bindingerne har følgende generelle struktur (I):
(i) eller et salt eller en isomer deraf, og hvor hver af intersubunit-bindingerne (I) uafhængigt er binding (A) eller binding (B): hvor for binding (A) : W ved hver forekomst uafhængigt er S eller O; X ved hver forekomst uafhængigt er -N(CH3)2, -NR1R2, -OR3 eller;
(TT) Y ved hver forekomst uafhængigt er O eller -NR2, R1 ved hver forekomst uafhængigt er hydrogen eller methyl; R2 ved hver forekomst uafhængigt er hydrogen eller -LNR4R5R7; R3 ved hver forekomst uafhængigt er hydrogen eller Ci-C6alkyl; R4 ved hver forekomst uafhængigt er hydrogen, methyl, C(=NH)NH2, -Z-L-NHC (=NH)NH2 eller - [C (0) CHR' NH] mH, hvor Z er carbonyl(C(0) ) eller en direkte binding, R' er en sidekæde på en naturligt forekommende aminosyre eller en én- eller to-carbonhomolog dertil, og m er 1 til 6; R5 ved hver forekomst uafhængigt er hydrogen, methyl eller et elektronpar; R6 ved hver forekomst uafhængigt er hydrogen eller methyl; R7 ved hver forekomst uafhængigt er hydrogen, Ci-C6alkyl eller Ci-C6alkoxyalkyl; L er en eventuel linker med en længde på op til 18 atomer, der omfatter alkyl-, alkoxy- eller alkylaminogrupper eller kombinationer deraf; og hvor for binding (B): W ved hver forekomst uafhængigt er S eller 0; X ved hver forekomst uafhængigt er -NR8R9 eller -OR3; og Y ved hver forekomst uafhængigt er 0 eller -NR10, eller Y og W hver er 0, R8 ved hver forekomst uafhængigt er hydrogen eller C2-Ci2alkyl; R9 ved hver forekomst uafhængigt er hydrogen, Ci-Ci2alkyl, Ci-Ci2aralkyl eller aryl; R10 ved hver forekomst uafhængigt er hydrogen, Ci-Ci2alkyl eller -LNR4R5R7; hvor R8 og R9 kan bindes sammen til frembringelse af en 5-18-leddet mono- eller bicyklisk heterocyclyl, eller R8, R9 eller R3 kan bindes sammen med R10 til frembringelse af en 5-7-leddet heterocyclyl, og hvor X har følgende struktur (III), når X er 4-piparazino:
(III) hvor: R11 ved hver forekomst uafhængigt er C2-Ci2alkyl, Ci- Ci2aminoalkyl, Ci-Ci2alkylcarbonyl, aryl, heteroaryl eller heterocyclyl; og R ved hver forekomst uafhængigt er et elektronpar, hydrogen eller Ci-Ci2alkyl; og R12 ved hver forekomst uafhængigt er hydrogen, Ci-Ci2alkyl, Ci-Ci2aminoalkyl, -NH2, -NR13R14, -NR13R14R15, Ci-Ci2alkylcarbonyl, oxo, -CN, trifluormethyl, amidyl, amidinyl, amidinylalkyl, amidinylalkylcarbonyl guanidinyl, guanidinylalkyl, guanidinylalkylcarbonyl, cholat, deoxycholat, aryl, heteroaryl, heterocyclyl, -SR13 eller Ci-Ci2alkoxy, hvor R13, R14 og R15 ved hver forekomst uafhængigt er Ci-Ci2alkyl; hvor mindst én of intersubunit-bindingerne er binding (B) , eller hvor hver binding (B) , hvis den er til stede, har den samme struktur ved hver forekomst; og hvor antisense-oligonukleotidet er kovalent bundet til et cellepenetrerende peptid og en linkerdel, hvor linkerdelen er valgt blandt glycin, cystein, prolin, 6-aminohexansyre (Ahx), β-alanin (B) og Ahx-B, og det cellepenetrerende peptid er valgt blandt SEQ ID NO: 39-54.
6. Oligonukleotid ifølge et hvilket som helst af kravene 1- 5, hvor målretningssekvensen består af en hvilken som helst af SEQ ID NO: 4, 5, 10, 11, 13, 14 og 16.
7. Oligonukleotid ifølge et hvilket som helst af kravene 1- 6, hvor målretningssekvensen er SEQ ID NO: 4.
8. Oligonukleotid ifølge et hvilket som helst af kravene 1-6, hvor målretningssekvensen er SEQ ID NO: 5.
9. Oligonukleotid ifølge et hvilket som helst af kravene 1-6, hvor målretningssekvensen er SEQ ID NO: 10.
10. Oligonukleotid ifølge et hvilket som helst af kravene 1-6, hvor målretningssekvensen er SEQ ID NO: 11.
11. Oligonukleotid ifølge et hvilket som helst af kravene 1-6, hvor målretningssekvensen er SEQ ID NO: 13.
12. Oligonukleotid ifølge et hvilket som helst af kravene 1-6, hvor målretningssekvensen er SEQ ID NO: 14.
13. Oligonukleotid ifølge et hvilket som helst af kravene 1-6, hvor målretningssekvensen er SEQ ID NO: 16.
Applications Claiming Priority (2)
Application Number | Priority Date | Filing Date | Title |
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US201161568590P | 2011-12-08 | 2011-12-08 | |
PCT/US2012/068606 WO2013086441A2 (en) | 2011-12-08 | 2012-12-07 | Oligonucleotide analogues targeting human lmna |
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DK2788487T3 true DK2788487T3 (da) | 2018-07-23 |
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DK12805882.3T DK2788487T3 (da) | 2011-12-08 | 2012-12-07 | Oligonukleotidanaloger målrettet mod human lmna |
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Country | Link |
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US (7) | US9326992B2 (da) |
EP (3) | EP3399038B1 (da) |
JP (7) | JP6132848B2 (da) |
CY (1) | CY1120495T1 (da) |
DK (1) | DK2788487T3 (da) |
ES (2) | ES2935606T3 (da) |
HR (1) | HRP20181022T1 (da) |
HU (1) | HUE038369T2 (da) |
LT (1) | LT2788487T (da) |
PL (1) | PL2788487T3 (da) |
PT (1) | PT2788487T (da) |
RS (1) | RS57467B1 (da) |
SI (1) | SI2788487T1 (da) |
TR (1) | TR201809173T4 (da) |
WO (2) | WO2013086444A2 (da) |
Families Citing this family (34)
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AU2011257980B2 (en) | 2010-05-28 | 2016-06-30 | Sarepta Therapeutics, Inc. | Oligonucleotide analogues having modified intersubunit linkages and/or terminal groups |
WO2012031243A2 (en) | 2010-09-03 | 2012-03-08 | Avi Biopharma, Inc. | dsRNA MOLECULES COMPRISING OLIGONUCLEOTIDE ANALOGS HAVING MODIFIED INTERSUBUNIT LINKAGES AND/OR TERMINAL GROUPS |
KR102271212B1 (ko) | 2011-11-18 | 2021-07-01 | 사렙타 쎄러퓨틱스, 인코퍼레이티드 | 기능적으로-변형된 올리고뉴클레오티드 및 이의 서브유니트 |
HUE038369T2 (hu) | 2011-12-08 | 2018-10-29 | Sarepta Therapeutics Inc | Humán LMNA-t célzó oligonukleotid-analógok |
US20150044192A1 (en) | 2013-08-09 | 2015-02-12 | President And Fellows Of Harvard College | Methods for identifying a target site of a cas9 nuclease |
US20150197534A1 (en) * | 2013-09-05 | 2015-07-16 | Sarepta Therapeutics, Inc. | Antisense-induced exon2 inclusion in acid alpha-glucosidase |
US9340799B2 (en) | 2013-09-06 | 2016-05-17 | President And Fellows Of Harvard College | MRNA-sensing switchable gRNAs |
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WO2016022363A2 (en) | 2014-07-30 | 2016-02-11 | President And Fellows Of Harvard College | Cas9 proteins including ligand-dependent inteins |
WO2016187425A1 (en) | 2015-05-19 | 2016-11-24 | Sarepta Therapeutics, Inc. | Peptide oligonucleotide conjugates |
EP3851531A1 (en) * | 2015-06-01 | 2021-07-21 | Sarepta Therapeutics, Inc. | Antisense-induced exon exclusion in type vii collagen |
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KR102329187B1 (ko) * | 2016-04-29 | 2021-11-22 | 사렙타 쎄러퓨틱스, 인코퍼레이티드 | 인간 lmna를 표적화하는 올리고뉴클레오타이드 유사체 |
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WO2018165504A1 (en) | 2017-03-09 | 2018-09-13 | President And Fellows Of Harvard College | Suppression of pain by gene editing |
KR20190127797A (ko) | 2017-03-10 | 2019-11-13 | 프레지던트 앤드 펠로우즈 오브 하바드 칼리지 | 시토신에서 구아닌으로의 염기 편집제 |
CN110536964A (zh) * | 2017-03-10 | 2019-12-03 | 国立研究开发法人国立成育医疗研究中心 | 反义寡核苷酸和糖原贮积病Ia型预防或治疗用组合物 |
CA3057192A1 (en) | 2017-03-23 | 2018-09-27 | President And Fellows Of Harvard College | Nucleobase editors comprising nucleic acid programmable dna binding proteins |
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