CN106702000A - 利用等位基因特异性抑制序列变体的核酸扩增 - Google Patents
利用等位基因特异性抑制序列变体的核酸扩增 Download PDFInfo
- Publication number
- CN106702000A CN106702000A CN201710109955.4A CN201710109955A CN106702000A CN 106702000 A CN106702000 A CN 106702000A CN 201710109955 A CN201710109955 A CN 201710109955A CN 106702000 A CN106702000 A CN 106702000A
- Authority
- CN
- China
- Prior art keywords
- oligonucleotide
- target sequence
- nucleic acid
- variants
- amplification
- Prior art date
- Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
- Pending
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Classifications
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
- C12Q1/6844—Nucleic acid amplification reactions
- C12Q1/6858—Allele-specific amplification
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- Chemical & Material Sciences (AREA)
- Life Sciences & Earth Sciences (AREA)
- Organic Chemistry (AREA)
- Engineering & Computer Science (AREA)
- Zoology (AREA)
- Wood Science & Technology (AREA)
- Proteomics, Peptides & Aminoacids (AREA)
- Health & Medical Sciences (AREA)
- Biophysics (AREA)
- Chemical Kinetics & Catalysis (AREA)
- Immunology (AREA)
- Microbiology (AREA)
- Molecular Biology (AREA)
- Analytical Chemistry (AREA)
- Physics & Mathematics (AREA)
- Biotechnology (AREA)
- Biochemistry (AREA)
- Bioinformatics & Cheminformatics (AREA)
- General Engineering & Computer Science (AREA)
- General Health & Medical Sciences (AREA)
- Genetics & Genomics (AREA)
- Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
- Preparation Of Compounds By Using Micro-Organisms (AREA)
Applications Claiming Priority (3)
| Application Number | Priority Date | Filing Date | Title |
|---|---|---|---|
| US14311309P | 2009-01-07 | 2009-01-07 | |
| US61/143113 | 2009-01-07 | ||
| CN2010800043562A CN102272333A (zh) | 2009-01-07 | 2010-01-07 | 利用等位基因特异性抑制序列变体的核酸扩增 |
Related Parent Applications (1)
| Application Number | Title | Priority Date | Filing Date |
|---|---|---|---|
| CN2010800043562A Division CN102272333A (zh) | 2009-01-07 | 2010-01-07 | 利用等位基因特异性抑制序列变体的核酸扩增 |
Publications (1)
| Publication Number | Publication Date |
|---|---|
| CN106702000A true CN106702000A (zh) | 2017-05-24 |
Family
ID=41682254
Family Applications (2)
| Application Number | Title | Priority Date | Filing Date |
|---|---|---|---|
| CN201710109955.4A Pending CN106702000A (zh) | 2009-01-07 | 2010-01-07 | 利用等位基因特异性抑制序列变体的核酸扩增 |
| CN2010800043562A Pending CN102272333A (zh) | 2009-01-07 | 2010-01-07 | 利用等位基因特异性抑制序列变体的核酸扩增 |
Family Applications After (1)
| Application Number | Title | Priority Date | Filing Date |
|---|---|---|---|
| CN2010800043562A Pending CN102272333A (zh) | 2009-01-07 | 2010-01-07 | 利用等位基因特异性抑制序列变体的核酸扩增 |
Country Status (7)
| Country | Link |
|---|---|
| US (1) | US8206929B2 (enExample) |
| EP (1) | EP2385991B1 (enExample) |
| JP (1) | JP5785095B2 (enExample) |
| CN (2) | CN106702000A (enExample) |
| CA (1) | CA2747068C (enExample) |
| ES (1) | ES2634428T3 (enExample) |
| WO (1) | WO2010079127A1 (enExample) |
Families Citing this family (15)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| US8623603B2 (en) | 2010-03-08 | 2014-01-07 | Dana-Farber Cancer Institute, Inc. | Full cold-PCR enrichment with reference blocking sequence |
| EP3333269B1 (en) | 2011-03-31 | 2021-05-05 | Dana-Farber Cancer Institute, Inc. | Methods to enable multiplex cold-pcr |
| EP2744916A4 (en) | 2011-07-13 | 2015-06-17 | Primeradx Inc | MULTIMODAL PROCEDURE FOR THE SIMULTANEOUS DETECTION AND QUANTIFICATION OF MULTIPLE NUCLEIC ACIDS IN ONE SAMPLE |
| GB201116876D0 (en) | 2011-09-30 | 2011-11-16 | Epistem Ltd | Mutational analysis of JAK2 |
| ES2662825T3 (es) | 2013-02-25 | 2018-04-09 | Seegene, Inc. | Detección de variación de nucleótido en una secuencia de ácidos nucleicos diana |
| WO2015008985A1 (en) | 2013-07-15 | 2015-01-22 | Seegene, Inc. | Detection of target nucleic acid sequence by pto cleavage and extension-dependent immobilized oligonucleotide hybridization |
| US10913977B2 (en) | 2013-07-24 | 2021-02-09 | Dana-Farber Cancer Institute, Inc. | Methods and compositions to enable enrichment of minor DNA alleles by limiting denaturation time in PCR or simply enable enrichment of minor DNA alleles by limiting the denaturation time in PCR |
| KR101757473B1 (ko) | 2013-10-18 | 2017-07-13 | 주식회사 씨젠 | hCTO를 이용하는 PTO 절단 및 연장 분석에 의한 고상에서의 타겟 핵산 서열 검출 |
| US20160273022A1 (en) | 2013-10-20 | 2016-09-22 | Trovagene, Inc. | Synthesis and enrichment of nucleic acid sequences |
| EP4512908A3 (en) * | 2014-05-19 | 2025-03-26 | William Marsh Rice University | Allele-specific amplification using a composition of overlapping non-allele-specific primer and allele-specific blocker oligonucleotides |
| JP5813263B1 (ja) * | 2015-03-31 | 2015-11-17 | 日鉄住金環境株式会社 | 遺伝子変異の検出方法及びそれに用いる蛍光標識オリゴヌクレオチド |
| EP3551756A4 (en) | 2016-12-12 | 2020-07-15 | Dana Farber Cancer Institute, Inc. | COMPOSITIONS AND METHODS FOR MOLECULAR BARCODE CODING OF DNA MOLECULES BEFORE ENRICHMENT OF MUTATIONS AND / OR DETECTION OF MUTATIONS |
| WO2019023243A1 (en) | 2017-07-24 | 2019-01-31 | Dana-Farber Cancer Institute, Inc. | METHODS AND COMPOSITIONS FOR SELECTING AND AMPLIFYING DNA TARGETS IN A SINGLE REACTION MIXTURE |
| US20250092445A1 (en) * | 2021-08-25 | 2025-03-20 | Manjing Genscript Biotech Co., Ltd. | Primer set and gene chip method for detecting single base mutation |
| JP2024531713A (ja) * | 2021-09-13 | 2024-08-29 | ネクスジェン キャンサー ディテクション エルエルシー | 試料中の標的ポリヌクレオチドを検出するための方法 |
Citations (3)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| US6001611A (en) * | 1997-03-20 | 1999-12-14 | Roche Molecular Systems, Inc. | Modified nucleic acid amplification primers |
| CN1471588A (zh) * | 2000-08-23 | 2004-01-28 | 宝生物工程株式会社 | 核酸扩增方法 |
| CN1810990A (zh) * | 1999-03-19 | 2006-08-02 | 宝生物工程株式会社 | 用于扩增核酸序列的方法 |
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| Publication number | Priority date | Publication date | Assignee | Title |
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| US4469863A (en) | 1980-11-12 | 1984-09-04 | Ts O Paul O P | Nonionic nucleic acid alkyl and aryl phosphonates and processes for manufacture and use thereof |
| US5235033A (en) | 1985-03-15 | 1993-08-10 | Anti-Gene Development Group | Alpha-morpholino ribonucleoside derivatives and polymers thereof |
| US5034506A (en) | 1985-03-15 | 1991-07-23 | Anti-Gene Development Group | Uncharged morpholino-based polymers having achiral intersubunit linkages |
| DE3529478A1 (de) | 1985-08-16 | 1987-02-19 | Boehringer Mannheim Gmbh | 7-desaza-2'desoxyguanosin-nukleotide, verfahren zu deren herstellung und deren verwendung zur nukleinsaeure-sequenzierung |
| US5374553A (en) | 1986-08-22 | 1994-12-20 | Hoffmann-La Roche Inc. | DNA encoding a thermostable nucleic acid polymerase enzyme from thermotoga maritima |
| US5455170A (en) | 1986-08-22 | 1995-10-03 | Hoffmann-La Roche Inc. | Mutated thermostable nucleic acid polymerase enzyme from Thermus species Z05 |
| US5795762A (en) | 1986-08-22 | 1998-08-18 | Roche Molecular Systems, Inc. | 5' to 3' exonuclease mutations of thermostable DNA polymerases |
| US5405774A (en) | 1986-08-22 | 1995-04-11 | Hoffmann-La Roche Inc. | DNA encoding a mutated thermostable nucleic acid polymerase enzyme from thermus species sps17 |
| US5466591A (en) | 1986-08-22 | 1995-11-14 | Hoffmann-La Roche Inc. | 5' to 3' exonuclease mutations of thermostable DNA polymerases |
| US5216141A (en) | 1988-06-06 | 1993-06-01 | Benner Steven A | Oligonucleotide analogs containing sulfur linkages |
| US5386023A (en) | 1990-07-27 | 1995-01-31 | Isis Pharmaceuticals | Backbone modified oligonucleotide analogs and preparation thereof through reductive coupling |
| US5602240A (en) | 1990-07-27 | 1997-02-11 | Ciba Geigy Ag. | Backbone modified oligonucleotide analogs |
| US5210015A (en) | 1990-08-06 | 1993-05-11 | Hoffman-La Roche Inc. | Homogeneous assay system using the nuclease activity of a nucleic acid polymerase |
| US5968799A (en) | 1990-09-28 | 1999-10-19 | Roche Molecular Systems, Inc. | Purified thermostable nucleic acid polymerase enzyme from thermosipho africanus |
| JPH04234422A (ja) | 1990-10-31 | 1992-08-24 | Internatl Business Mach Corp <Ibm> | 二重硬化エポキシバックシール処方物 |
| AU3222793A (en) | 1991-11-26 | 1993-06-28 | Gilead Sciences, Inc. | Enhanced triple-helix and double-helix formation with oligomers containing modified pyrimidines |
| TW393513B (en) | 1991-11-26 | 2000-06-11 | Isis Pharmaceuticals Inc | Enhanced triple-helix and double-helix formation with oligomers containing modified pyrimidines |
| US5484908A (en) | 1991-11-26 | 1996-01-16 | Gilead Sciences, Inc. | Oligonucleotides containing 5-propynyl pyrimidines |
| US5644048A (en) | 1992-01-10 | 1997-07-01 | Isis Pharmaceuticals, Inc. | Process for preparing phosphorothioate oligonucleotides |
| DE4234086A1 (de) | 1992-02-05 | 1993-08-12 | Diagen Inst Molekularbio | Verfahren zur bestimmung von in vitro amplifizierten nukleinsaeuresequenzen |
| US5637684A (en) | 1994-02-23 | 1997-06-10 | Isis Pharmaceuticals, Inc. | Phosphoramidate and phosphorothioamidate oligomeric compounds |
| GB9513271D0 (en) | 1995-06-29 | 1995-09-06 | Johnson James G | Stress free fish harvester |
| US5773258A (en) | 1995-08-25 | 1998-06-30 | Roche Molecular Systems, Inc. | Nucleic acid amplification using a reversibly inactivated thermostable enzyme |
| EP1033411B1 (en) | 1996-06-04 | 2006-02-22 | University of Utah Research Foundation | Fluorescent donor-acceptor pair |
| US5849497A (en) * | 1997-04-03 | 1998-12-15 | The Research Foundation Of State University Of New York | Specific inhibition of the polymerase chain reaction using a non-extendable oligonucleotide blocker |
| US6228628B1 (en) | 1997-07-09 | 2001-05-08 | Roche Molecular Systems | Mutant chimeric DNA polymerase |
| JP3274396B2 (ja) | 1997-11-07 | 2002-04-15 | 株式会社東芝 | パターン測定方法 |
| JP4768132B2 (ja) | 1999-03-24 | 2011-09-07 | エクシコン エ/エス | [2.2.1]ビシクロヌクレオシドの改良された製法 |
| DK1206571T3 (da) | 1999-05-04 | 2004-12-06 | Ortho Clinical Diagnostics Inc | Hurtig og effektiv indfangning af DNA fra pröve uden anvendelse af cellelyseringsreagens |
| US6479242B1 (en) * | 2000-10-26 | 2002-11-12 | Cleveland State University | Method for genotyping of single nucleotide polymorphism |
| GB0101397D0 (en) * | 2001-01-19 | 2001-03-07 | Amersham Pharm Biotech Uk Ltd | Suppression of non-specific nucleic acid amplication |
| EP1253205A1 (en) | 2001-04-24 | 2002-10-30 | LION Bioscience AG | Method of blocking amplification of selected sequences |
| US7198897B2 (en) * | 2001-12-19 | 2007-04-03 | Brandeis University | Late-PCR |
| ATE519863T1 (de) * | 2005-10-05 | 2011-08-15 | Hoffmann La Roche | Nicht-fluoreszente energieübertragung |
| US7803543B2 (en) * | 2007-01-19 | 2010-09-28 | Chang Gung University | Methods and kits for the detection of nucleotide mutations using peptide nucleic acid as both PCR clamp and sensor probe |
| US8071338B2 (en) * | 2007-08-08 | 2011-12-06 | Roche Molecular Systems, Inc. | Suppression of amplification using an oligonucleotide and a polymerase significantly lacking 5′-3′ nuclease activity |
| ES2408654T3 (es) | 2008-07-02 | 2013-06-21 | Avexa Limited | Tiazopirimidinonas y uso de las mismas |
-
2010
- 2010-01-06 US US12/683,111 patent/US8206929B2/en active Active
- 2010-01-07 CN CN201710109955.4A patent/CN106702000A/zh active Pending
- 2010-01-07 CN CN2010800043562A patent/CN102272333A/zh active Pending
- 2010-01-07 EP EP10700205.7A patent/EP2385991B1/en active Active
- 2010-01-07 JP JP2011544052A patent/JP5785095B2/ja active Active
- 2010-01-07 ES ES10700205.7T patent/ES2634428T3/es active Active
- 2010-01-07 CA CA2747068A patent/CA2747068C/en active Active
- 2010-01-07 WO PCT/EP2010/000030 patent/WO2010079127A1/en not_active Ceased
Patent Citations (3)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| US6001611A (en) * | 1997-03-20 | 1999-12-14 | Roche Molecular Systems, Inc. | Modified nucleic acid amplification primers |
| CN1810990A (zh) * | 1999-03-19 | 2006-08-02 | 宝生物工程株式会社 | 用于扩增核酸序列的方法 |
| CN1471588A (zh) * | 2000-08-23 | 2004-01-28 | 宝生物工程株式会社 | 核酸扩增方法 |
Non-Patent Citations (1)
| Title |
|---|
| DAN YU等: "Specific Inhibition of PCR by Non-Extendable Oligo-nucleotides Using a 5" to 3" Exonuclease-Deficient DNA Polymerase", 《BIOTECHNIQUES》 * |
Also Published As
| Publication number | Publication date |
|---|---|
| WO2010079127A1 (en) | 2010-07-15 |
| CN102272333A (zh) | 2011-12-07 |
| CA2747068C (en) | 2014-04-08 |
| JP2012514451A (ja) | 2012-06-28 |
| EP2385991A1 (en) | 2011-11-16 |
| JP5785095B2 (ja) | 2015-09-24 |
| CA2747068A1 (en) | 2010-07-15 |
| US20100173311A1 (en) | 2010-07-08 |
| US8206929B2 (en) | 2012-06-26 |
| EP2385991B1 (en) | 2017-05-17 |
| ES2634428T3 (es) | 2017-09-27 |
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