CN104862422B - 检测bk病毒的方法和组合物 - Google Patents

检测bk病毒的方法和组合物 Download PDF

Info

Publication number
CN104862422B
CN104862422B CN201510303094.4A CN201510303094A CN104862422B CN 104862422 B CN104862422 B CN 104862422B CN 201510303094 A CN201510303094 A CN 201510303094A CN 104862422 B CN104862422 B CN 104862422B
Authority
CN
China
Prior art keywords
nucleic acid
sequence
bkv
target
sequences
Prior art date
Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
Expired - Lifetime
Application number
CN201510303094.4A
Other languages
English (en)
Chinese (zh)
Other versions
CN104862422A (zh
Inventor
F·陈
L·I·孔
J·陈
M·捷纳提保
Current Assignee (The listed assignees may be inaccurate. Google has not performed a legal analysis and makes no representation or warranty as to the accuracy of the list.)
Quest Diagnostics Infectious Disease Inc
Original Assignee
Focus Diagnostics Inc
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Focus Diagnostics Inc filed Critical Focus Diagnostics Inc
Publication of CN104862422A publication Critical patent/CN104862422A/zh
Application granted granted Critical
Publication of CN104862422B publication Critical patent/CN104862422B/zh
Anticipated expiration legal-status Critical
Expired - Lifetime legal-status Critical Current

Links

Classifications

    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/70—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving virus or bacteriophage
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/70—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving virus or bacteriophage
    • C12Q1/701—Specific hybridization probes
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6813—Hybridisation assays
    • C12Q1/6816—Hybridisation assays characterised by the detection means
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N2710/00—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA dsDNA viruses
    • C12N2710/00011—Details
    • C12N2710/22011—Polyomaviridae, e.g. polyoma, SV40, JC
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2600/00—Oligonucleotides characterized by their use
    • C12Q2600/158—Expression markers
    • Y—GENERAL TAGGING OF NEW TECHNOLOGICAL DEVELOPMENTS; GENERAL TAGGING OF CROSS-SECTIONAL TECHNOLOGIES SPANNING OVER SEVERAL SECTIONS OF THE IPC; TECHNICAL SUBJECTS COVERED BY FORMER USPC CROSS-REFERENCE ART COLLECTIONS [XRACs] AND DIGESTS
    • Y02—TECHNOLOGIES OR APPLICATIONS FOR MITIGATION OR ADAPTATION AGAINST CLIMATE CHANGE
    • Y02A—TECHNOLOGIES FOR ADAPTATION TO CLIMATE CHANGE
    • Y02A50/00—TECHNOLOGIES FOR ADAPTATION TO CLIMATE CHANGE in human health protection, e.g. against extreme weather
    • Y02A50/30—Against vector-borne diseases, e.g. mosquito-borne, fly-borne, tick-borne or waterborne diseases whose impact is exacerbated by climate change

Landscapes

  • Chemical & Material Sciences (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Organic Chemistry (AREA)
  • Health & Medical Sciences (AREA)
  • Zoology (AREA)
  • Wood Science & Technology (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Engineering & Computer Science (AREA)
  • Immunology (AREA)
  • Microbiology (AREA)
  • Physics & Mathematics (AREA)
  • Molecular Biology (AREA)
  • Biotechnology (AREA)
  • Biophysics (AREA)
  • Analytical Chemistry (AREA)
  • Biochemistry (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • General Engineering & Computer Science (AREA)
  • General Health & Medical Sciences (AREA)
  • Genetics & Genomics (AREA)
  • Virology (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
CN201510303094.4A 2005-08-02 2006-07-25 检测bk病毒的方法和组合物 Expired - Lifetime CN104862422B (zh)

Applications Claiming Priority (5)

Application Number Priority Date Filing Date Title
US70521705P 2005-08-02 2005-08-02
US60/705,217 2005-08-02
US11/246,904 US7892795B2 (en) 2005-08-02 2005-10-06 Methods and compositions for detecting BK virus
US11/246,904 2005-10-06
CN200680034771.6A CN101511995B (zh) 2005-08-02 2006-07-25 检测bk病毒的方法和组合物

Related Parent Applications (1)

Application Number Title Priority Date Filing Date
CN200680034771.6A Division CN101511995B (zh) 2005-08-02 2006-07-25 检测bk病毒的方法和组合物

Publications (2)

Publication Number Publication Date
CN104862422A CN104862422A (zh) 2015-08-26
CN104862422B true CN104862422B (zh) 2019-07-16

Family

ID=37709186

Family Applications (3)

Application Number Title Priority Date Filing Date
CN201510303094.4A Expired - Lifetime CN104862422B (zh) 2005-08-02 2006-07-25 检测bk病毒的方法和组合物
CN201910529553.9A Expired - Lifetime CN110423844B (zh) 2005-08-02 2006-07-25 检测bk病毒的方法和组合物
CN200680034771.6A Expired - Lifetime CN101511995B (zh) 2005-08-02 2006-07-25 检测bk病毒的方法和组合物

Family Applications After (2)

Application Number Title Priority Date Filing Date
CN201910529553.9A Expired - Lifetime CN110423844B (zh) 2005-08-02 2006-07-25 检测bk病毒的方法和组合物
CN200680034771.6A Expired - Lifetime CN101511995B (zh) 2005-08-02 2006-07-25 检测bk病毒的方法和组合物

Country Status (8)

Country Link
US (4) US7892795B2 (enExample)
EP (2) EP2662456A1 (enExample)
JP (1) JP2009502196A (enExample)
CN (3) CN104862422B (enExample)
AU (1) AU2006275803B2 (enExample)
CA (1) CA2617635C (enExample)
ES (1) ES2552725T3 (enExample)
WO (1) WO2007016275A2 (enExample)

Families Citing this family (18)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US7892795B2 (en) * 2005-08-02 2011-02-22 Focus Diagnostics, Inc. Methods and compositions for detecting BK virus
US20090246754A1 (en) * 2008-02-19 2009-10-01 Intelligent Mdx Optimized probes and primers and methods of using same for the detection and quantitation of bk virus
JP2011512160A (ja) * 2008-02-20 2011-04-21 アイエム テクノロジーズ， インコーポレイテッド ポリオーマウイルスの検出
WO2009126517A2 (en) * 2008-04-09 2009-10-15 Intelligent Medical Devices, Inc. Optimized probes and primers and methods of using same for the detection, quantification and grouping of hiv-1
CN102344970B (zh) * 2010-07-27 2013-01-23 温州医学院附属第一医院 同时检测人cmv和bk病毒dna的引物序列及定量检测试剂盒
CN102154523B (zh) * 2011-04-07 2013-01-02 温岭市第一人民医院 检测人bk病毒核酸的引物与荧光探针及其应用
CN102690894B (zh) * 2011-06-08 2013-05-01 中国人民解放军第三〇九医院 一种bk病毒的检测方法、其试剂盒及应用
CN103093120A (zh) * 2011-11-08 2013-05-08 北京健数通生物计算技术有限公司 高通量检测脊椎动物病原体基因芯片的探针设计方法
CN104745723A (zh) * 2015-01-30 2015-07-01 湖北永邦医疗科技有限公司 一种用于检测bk病毒的引物、探针和试剂盒
US10793923B2 (en) * 2016-11-09 2020-10-06 Roche Molecular Systems, Inc. Compositions and methods for detection of BK virus
CN112218949B (zh) * 2018-03-02 2025-02-11 莱顿大学医学中心附属莱顿教学医院 多瘤病毒复制的抑制
FR3082524B1 (fr) * 2018-06-18 2022-03-25 Univ Paris Sud Methode de stratification du risque de nephropathie a bk-virus apres transplantation renale
CA3116895A1 (en) * 2018-10-22 2020-04-30 Gen-Probe Incorporated Compositions and methods for amplifying, detecting or quantifying human polyomavirus bk virus
KR102347899B1 (ko) * 2019-06-21 2022-01-06 울산대학교 산학협력단 신장이식 후 bk 바이러스 신병증의 진단 또는 예후 예측을 위한 소변 엑소좀 바이오마커
CN111733298B (zh) * 2020-08-25 2020-11-20 圣湘生物科技股份有限公司 检测多瘤病毒并分型的组合物、试剂盒、方法及其用途
TWI833069B (zh) 2021-03-17 2024-02-21 國防醫學院 核酸探針組、核酸側流檢測套組以及該核酸側流檢測套組之用途
CN114107571B (zh) * 2022-01-18 2024-06-21 复旦大学附属中山医院 用于bk病毒lamp检测的试剂盒
CN115029485A (zh) * 2022-06-20 2022-09-09 广东永诺医疗科技有限公司 一种基于微滴式数字pcr的bkv病毒检测试剂盒

Citations (1)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
CN1602361A (zh) * 2001-12-08 2005-03-30 视基因公司 杂交部分控制寡核苷酸及其应用

Family Cites Families (26)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US4318846A (en) 1979-09-07 1982-03-09 Syva Company Novel ether substituted fluorescein polyamino acid compounds as fluorescers and quenchers
US4458066A (en) 1980-02-29 1984-07-03 University Patents, Inc. Process for preparing polynucleotides
US4415732A (en) 1981-03-27 1983-11-15 University Patents, Inc. Phosphoramidite compounds and processes
US4605735A (en) 1983-02-14 1986-08-12 Wakunaga Seiyaku Kabushiki Kaisha Oligonucleotide derivatives
US4683202A (en) 1985-03-28 1987-07-28 Cetus Corporation Process for amplifying nucleic acid sequences
US4683195A (en) 1986-01-30 1987-07-28 Cetus Corporation Process for amplifying, detecting, and/or-cloning nucleic acid sequences
US4757141A (en) 1985-08-26 1988-07-12 Applied Biosystems, Incorporated Amino-derivatized phosphite and phosphate linking agents, phosphoramidite precursors, and useful conjugates thereof
US4889818A (en) 1986-08-22 1989-12-26 Cetus Corporation Purified thermostable enzyme
US5541308A (en) * 1986-11-24 1996-07-30 Gen-Probe Incorporated Nucleic acid probes for detection and/or quantitation of non-viral organisms
US6004745A (en) 1987-09-21 1999-12-21 Gen-Probe Incorporated Hybridization protection assay
US5283174A (en) 1987-09-21 1994-02-01 Gen-Probe, Incorporated Homogenous protection assay
US5639604A (en) 1987-09-21 1997-06-17 Gen-Probe Incorporated Homogeneous protection assay
US5585481A (en) 1987-09-21 1996-12-17 Gen-Probe Incorporated Linking reagents for nucleotide probes
US4914210A (en) 1987-10-02 1990-04-03 Cetus Corporation Oligonucleotide functionalizing reagents
US5185439A (en) 1987-10-05 1993-02-09 Gen-Probe Incorporated Acridinium ester labelling and purification of nucleotide probes
JP2650159B2 (ja) 1988-02-24 1997-09-03 アクゾ・ノベル・エヌ・ベー 核酸増幅方法
CA1340807C (en) 1988-02-24 1999-11-02 Lawrence T. Malek Nucleic acid amplification process
US5849481A (en) 1990-07-27 1998-12-15 Chiron Corporation Nucleic acid hybridization assays employing large comb-type branched polynucleotides
US5213796A (en) * 1991-05-06 1993-05-25 Dana Farber Cancer Institute Assay for polyomavirus in humans and uses thereof
US5538848A (en) 1994-11-16 1996-07-23 Applied Biosystems Division, Perkin-Elmer Corp. Method for detecting nucleic acid amplification using self-quenching fluorescence probe
US6127121A (en) * 1998-04-03 2000-10-03 Epoch Pharmaceuticals, Inc. Oligonucleotides containing pyrazolo[3,4-D]pyrimidines for hybridization and mismatch discrimination
US20030036524A1 (en) 2000-03-08 2003-02-20 Jens Licthenberg Method of sensitising endothelial cells to prodrugs
US6605602B1 (en) * 2001-09-28 2003-08-12 University Of Pittsburgh-Of The Commonwealth System Of Higher Education Method of treating BK virus nephropathy
US7892795B2 (en) * 2005-08-02 2011-02-22 Focus Diagnostics, Inc. Methods and compositions for detecting BK virus
WO2007127919A2 (en) * 2006-04-28 2007-11-08 Alnylam Pharmaceuticals, Inc. Compositions and methods for inhibiting expression of a gene from the jc virus
US20080003565A1 (en) * 2006-05-02 2008-01-03 Government Of The Us, As Represented By The Secretary, Department Of Health And Human Services Viral nucleic acid microarray and method of use

Patent Citations (1)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
CN1602361A (zh) * 2001-12-08 2005-03-30 视基因公司 杂交部分控制寡核苷酸及其应用

Non-Patent Citations (2)

* Cited by examiner, † Cited by third party
Title
BK virus DNA: complete nucleotide sequence of a human tumor virus;RC Yang et al;《Science》;19791031;340-352
Identification of a New Control Region in the Genome of the DDP Strain of BK Virus Isolated From PBMC;Anna Marta Degener et al;《Journal of Medical Virology》;19991231;413–419

Also Published As

Publication number Publication date
US20110143349A1 (en) 2011-06-16
AU2006275803B2 (en) 2012-08-30
JP2009502196A (ja) 2009-01-29
US20140349275A1 (en) 2014-11-27
HK1115613A1 (en) 2008-12-05
EP1910578A4 (en) 2009-12-09
US8748092B2 (en) 2014-06-10
CN110423844A (zh) 2019-11-08
CA2617635C (en) 2015-07-21
US20180044742A1 (en) 2018-02-15
CN110423844B (zh) 2023-10-24
AU2006275803A1 (en) 2007-02-08
CN101511995B (zh) 2015-07-01
US7892795B2 (en) 2011-02-22
US9745638B2 (en) 2017-08-29
EP2662456A1 (en) 2013-11-13
US10801078B2 (en) 2020-10-13
EP1910578B1 (en) 2015-06-10
ES2552725T3 (es) 2015-12-01
WO2007016275A2 (en) 2007-02-08
CN101511995A (zh) 2009-08-19
CN104862422A (zh) 2015-08-26
US20070031825A1 (en) 2007-02-08
EP1910578A2 (en) 2008-04-16
CA2617635A1 (en) 2007-02-08
WO2007016275A3 (en) 2009-04-30

Similar Documents

Publication Publication Date Title
US10801078B2 (en) Methods and compositions for detecting BK virus
CN110106290B (zh) 一种基于CRISPR/Cas系统用于检测ASFV的现场快速检测方法及试剂盒
US8119338B2 (en) Methods and compositions for detecting rhinoviruses
US20230332254A1 (en) COMPOSITIONS AND METHODS FOR RAPID DETECTION OF SARS-CoV-2
WO2021213163A1 (en) Identification of nsp1 gene as target of sars-cov-2 real-time rt-pcr using nanopore whole genome sequencing
CN116042927B (zh) 一种用于检测新型冠状病毒的CRISPR-Cas13系统及其试剂盒和方法
US20230167511A1 (en) An ultrasensitive rapid and portable case13d-based diagnostic assay
US8715935B2 (en) Standardized method and kit for the quantification of hepatitis A virus
ES2391079T3 (es) SENP1 como marcador de cáncer
CN101760519A (zh) 一种高灵敏度检测肺炎支原体的靶序列及试剂盒
CN101760520A (zh) 一种检测肺炎支原体的靶序列及试剂盒
EP1591544A1 (en) Detection of enterovirus nucleic acid
AU2012261529B2 (en) Methods and compositions for detecting BK virus
HK1115613B (en) Methods and compositions for detecting bk virus
WO2006009260A1 (ja) Ｅ型肝炎ウイルスの検出方法
JPH03120000A (ja) 腎症候性出血熱ウイルスの検出方法

Legal Events

Date Code Title Description
C06 Publication
PB01 Publication
EXSB Decision made by sipo to initiate substantive examination
SE01 Entry into force of request for substantive examination
GR01 Patent grant
GR01 Patent grant
CX01 Expiry of patent term

Granted publication date: 20190716