CA2385853A1 - Conception d'un oligonucleotide de recrutement de rnase h a haute affinite - Google Patents

Conception d'un oligonucleotide de recrutement de rnase h a haute affinite Download PDF

Info

Publication number
CA2385853A1
CA2385853A1 CA002385853A CA2385853A CA2385853A1 CA 2385853 A1 CA2385853 A1 CA 2385853A1 CA 002385853 A CA002385853 A CA 002385853A CA 2385853 A CA2385853 A CA 2385853A CA 2385853 A1 CA2385853 A1 CA 2385853A1
Authority
CA
Canada
Prior art keywords
lna
oxy
oligo
high affinity
monomers
Prior art date
Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
Abandoned
Application number
CA002385853A
Other languages
English (en)
Inventor
Mogens Havsteen Jakobsen
Claes Wahlestedt
Current Assignee (The listed assignees may be inaccurate. Google has not performed a legal analysis and makes no representation or warranty as to the accuracy of the list.)
Exiqon AS
Original Assignee
Individual
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Individual filed Critical Individual
Publication of CA2385853A1 publication Critical patent/CA2385853A1/fr
Abandoned legal-status Critical Current

Links

Classifications

    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12NMICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N15/00Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
    • C12N15/09Recombinant DNA-technology
    • C12N15/11DNA or RNA fragments; Modified forms thereof; Non-coding nucleic acids having a biological activity
    • C12N15/113Non-coding nucleic acids modulating the expression of genes, e.g. antisense oligonucleotides; Antisense DNA or RNA; Triplex- forming oligonucleotides; Catalytic nucleic acids, e.g. ribozymes; Nucleic acids used in co-suppression or gene silencing
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61PSPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P43/00Drugs for specific purposes, not provided for in groups A61P1/00-A61P41/00
    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07HSUGARS; DERIVATIVES THEREOF; NUCLEOSIDES; NUCLEOTIDES; NUCLEIC ACIDS
    • C07H19/00Compounds containing a hetero ring sharing one ring hetero atom with a saccharide radical; Nucleosides; Mononucleotides; Anhydro-derivatives thereof
    • C07H19/02Compounds containing a hetero ring sharing one ring hetero atom with a saccharide radical; Nucleosides; Mononucleotides; Anhydro-derivatives thereof sharing nitrogen
    • C07H19/04Heterocyclic radicals containing only nitrogen atoms as ring hetero atom
    • C07H19/06Pyrimidine radicals
    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07HSUGARS; DERIVATIVES THEREOF; NUCLEOSIDES; NUCLEOTIDES; NUCLEIC ACIDS
    • C07H19/00Compounds containing a hetero ring sharing one ring hetero atom with a saccharide radical; Nucleosides; Mononucleotides; Anhydro-derivatives thereof
    • C07H19/02Compounds containing a hetero ring sharing one ring hetero atom with a saccharide radical; Nucleosides; Mononucleotides; Anhydro-derivatives thereof sharing nitrogen
    • C07H19/04Heterocyclic radicals containing only nitrogen atoms as ring hetero atom
    • C07H19/16Purine radicals
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61KPREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
    • A61K38/00Medicinal preparations containing peptides
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12NMICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N2310/00Structure or type of the nucleic acid
    • C12N2310/30Chemical structure
    • C12N2310/32Chemical structure of the sugar
    • C12N2310/323Chemical structure of the sugar modified ring structure
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12NMICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N2310/00Structure or type of the nucleic acid
    • C12N2310/30Chemical structure
    • C12N2310/34Spatial arrangement of the modifications
    • C12N2310/341Gapmers, i.e. of the type ===---===
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12NMICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N2310/00Structure or type of the nucleic acid
    • C12N2310/30Chemical structure
    • C12N2310/34Spatial arrangement of the modifications
    • C12N2310/345Spatial arrangement of the modifications having at least two different backbone modifications

Landscapes

  • Chemical & Material Sciences (AREA)
  • Health & Medical Sciences (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Engineering & Computer Science (AREA)
  • Organic Chemistry (AREA)
  • Genetics & Genomics (AREA)
  • General Health & Medical Sciences (AREA)
  • Molecular Biology (AREA)
  • Biotechnology (AREA)
  • Biomedical Technology (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Biochemistry (AREA)
  • General Engineering & Computer Science (AREA)
  • Wood Science & Technology (AREA)
  • Zoology (AREA)
  • Biophysics (AREA)
  • Nuclear Medicine, Radiotherapy & Molecular Imaging (AREA)
  • Plant Pathology (AREA)
  • Physics & Mathematics (AREA)
  • Chemical Kinetics & Catalysis (AREA)
  • General Chemical & Material Sciences (AREA)
  • Medicinal Chemistry (AREA)
  • Microbiology (AREA)
  • Pharmacology & Pharmacy (AREA)
  • Animal Behavior & Ethology (AREA)
  • Public Health (AREA)
  • Veterinary Medicine (AREA)
  • Pharmaceuticals Containing Other Organic And Inorganic Compounds (AREA)
  • Saccharide Compounds (AREA)
  • Medicines That Contain Protein Lipid Enzymes And Other Medicines (AREA)
  • Medicinal Preparation (AREA)

Abstract

La présente invention a trait au domaine des analogues d'ADN bicycliques, par exemple les ALN et les modifications d'ALN, qui sont utilisés pour mettre au point des oligomères formant des duplex à haute affinité avec les ARN complémentaires, les duplex étant des substrats de Rnase H. Les oligonucléotides de l'invention peuvent être partiellement ou entièrement composés d'analogues d'ALN possédant une très haute affinité et une très haute capacité de recrutement de la RNase H. Grâce à la présente invention, on peut utiliser l'oxy-ALN seul pour construire de nouvelles molécules antisens présentant une activité biologique améliorée. Dans un autre mode de réalisation, on peut utiliser l'oxy-ALN en combinaison avec des ALN non oxy, tels que l'ADN, l'ARN ordinaires ou analogues, par exemple, le thio-ALN ou l'amino-ALN, pour créer des composés antisens de recrutement de RNase H à haute affinité sans qu'il soit nécessaire de s'en tenir à une structure rigide.
CA002385853A 1999-10-04 2000-10-03 Conception d'un oligonucleotide de recrutement de rnase h a haute affinite Abandoned CA2385853A1 (fr)

Applications Claiming Priority (5)

Application Number Priority Date Filing Date Title
DKPA199901422 1999-10-04
DKPA199901422 1999-10-04
US15772499P 1999-10-05 1999-10-05
US60/157,724 1999-10-05
PCT/DK2000/000550 WO2001025248A2 (fr) 1999-10-04 2000-10-03 Conception d'un oligonucleotide de recrutement de rnase h a haute affinite

Publications (1)

Publication Number Publication Date
CA2385853A1 true CA2385853A1 (fr) 2001-04-12

Family

ID=26065735

Family Applications (1)

Application Number Title Priority Date Filing Date
CA002385853A Abandoned CA2385853A1 (fr) 1999-10-04 2000-10-03 Conception d'un oligonucleotide de recrutement de rnase h a haute affinite

Country Status (6)

Country Link
EP (1) EP1224280A2 (fr)
JP (1) JP2003511016A (fr)
AU (1) AU7406700A (fr)
CA (1) CA2385853A1 (fr)
IL (1) IL148916A0 (fr)
WO (1) WO2001025248A2 (fr)

Families Citing this family (64)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
AU2002351077A1 (en) * 2001-11-05 2003-05-19 Exiqon A/S Oligonucleotides modified with novel alpha-l-rna analogues
HUE037352T2 (hu) 2002-04-05 2018-08-28 Roche Innovation Ct Copenhagen As A HIF-1alfa expresszálódását módosító oligomer vegyületek
US20040219565A1 (en) 2002-10-21 2004-11-04 Sakari Kauppinen Oligonucleotides useful for detecting and analyzing nucleic acids of interest
AU2013201763B2 (en) * 2002-11-18 2015-05-07 Roche Innovation Center Copenhagen A/S Amino-LNA, thio-LNA and alpha-L-oxy-LN
EP2284269B1 (fr) 2002-11-18 2017-08-09 Roche Innovation Center Copenhagen A/S Conception antisens
AU2015204315B2 (en) * 2002-11-18 2017-06-22 Roche Innovation Center Copenhagen A/S Amino-LNA, thio-LNA and alpha-L-oxy-LN
US7713738B2 (en) 2003-02-10 2010-05-11 Enzon Pharmaceuticals, Inc. Oligomeric compounds for the modulation of survivin expression
ES2576677T3 (es) 2003-03-21 2016-07-08 Roche Innovation Center Copenhagen A/S Análogos de ARN interfirientes cortos
WO2005013901A2 (fr) 2003-07-31 2005-02-17 Isis Pharmaceuticals, Inc. Composes oligomeres et compositions utilisables pour moduler des petits arn non-codants
US7622453B2 (en) 2003-12-23 2009-11-24 Santaris Pharma A/S Oligomeric compounds for the modulation of Bcl-2
NZ555644A (en) 2004-11-09 2009-04-30 Santaris Pharma As Potent LNA oligonucleotides for the inhibition of HIF-1A expression
US9447138B2 (en) 2004-11-09 2016-09-20 Roche Innovation Center Copenhagen A/S Potent LNA oligonucleotides for the inhibition of HIF-1a expression
BRPI0517613A (pt) 2004-11-09 2008-10-14 Santaris Pharma As oligonucleotìdeos lna e tratamento de cáncer
ATE494372T1 (de) 2005-08-29 2011-01-15 Regulus Therapeutics Inc Verfahren für mir-122a-modulation
EP2338992A3 (fr) * 2005-08-29 2011-10-12 Regulus Therapeutics, Inc Composes antisens ayant une activite anti-microarn amelioree
WO2007064945A2 (fr) 2005-12-01 2007-06-07 Pronai Therapeutics, Inc. Therapies contre le cancer et compositions pharmaceutiques utilisees dans ces therapies
EP2388328A1 (fr) 2006-01-27 2011-11-23 Isis Pharmaceuticals, Inc. Composés oligomères et compositions pour une utilisation dans la modulation de micro ARN
AU2007229161B2 (en) 2006-03-23 2012-07-12 Roche Innovation Center Copenhagen A/S Small internally segmented interfering RNA
SG170773A1 (en) 2006-04-03 2011-05-30 Santaris Pharma As Pharmaceutical composition comprising anti-mirna antisense oligonucleotides
DK2666859T3 (en) 2006-04-03 2019-04-08 Roche Innovation Ct Copenhagen As PHARMACEUTICAL COMPOSITION CONTAINING ANTI-miRNA ANTISENSE OLIGONUCLEOTIDES
JP2010521193A (ja) 2007-03-22 2010-06-24 サンタリス ファーマ アー/エス Apo−b100発現の阻害のためのrnaアンタゴニスト化合物
WO2008113832A2 (fr) 2007-03-22 2008-09-25 Santaris Pharma A/S Composés arn antagonistes courts pour la modulation de l'arnm cible
CA2689602A1 (fr) 2007-06-06 2008-12-18 Avi Biopharma, Inc. Proteines a variante d'epissure her2 et her3 solubles, oligonucleotides a permutation d'epissage et leur utilisation therapeutique
EP2183360B1 (fr) 2007-08-30 2017-01-11 Hadasit Medical Research Services&Development Company Ltd. Séquences d'acides nucléiques comprenant un site de liaison nf-(kappa)b dans la région promotrice de la o(6)-méthylguanine-adn-méthyl transférase (mgmt) et leur utilisation pour le traitement du cancer et de troubles de l'immunité
US8440637B2 (en) 2007-10-04 2013-05-14 Santaris Pharma A/S Combination treatment for the treatment of hepatitis C virus infection
WO2009059430A1 (fr) 2007-11-07 2009-05-14 The University Of British Columbia Dispositif microfluidique et procédé d'utilisation de ce dispositif
EP2268811A1 (fr) 2008-03-07 2011-01-05 Santaris Pharma A/S Compositions pharmaceutiques pour le traitement de maladies associées aux microarn
ES2541442T3 (es) 2008-08-01 2015-07-20 Roche Innovation Center Copenhagen A/S Modulación mediada por microARN de factores estimulantes de colonias
WO2010122538A1 (fr) 2009-04-24 2010-10-28 Santaris Pharma A/S Compositions pharmaceutiques pour le traitement de patients souffrant du vhc ne réagissant pas aux interférons
US8563528B2 (en) 2009-07-21 2013-10-22 Santaris Pharma A/S Antisense oligomers targeting PCSK9
WO2011105901A2 (fr) 2010-02-23 2011-09-01 Academisch Ziekenhuis Bij De Universiteit Van Amsterdam Antagonistes de composant du complément 9 (c9) et utilisations associées
WO2011105902A2 (fr) 2010-02-23 2011-09-01 Academisch Ziekenhuis Bij De Universiteit Van Amsterdam Antagonistes de composant du complément 8-bêta (c8-bêta) et utilisations associées
WO2011105900A2 (fr) 2010-02-23 2011-09-01 Academisch Ziekenhuis Bij De Universiteit Van Amsterdam Antagonistes de composant du complément 8-alpha (c8-alpha) et utilisations associées
GB201012418D0 (en) 2010-07-23 2010-09-08 Santaris Pharma As Process
CN103140582A (zh) 2010-08-24 2013-06-05 默沙东公司 含有内部非核酸间隔子的单链RNAi试剂
WO2013040429A1 (fr) 2011-09-14 2013-03-21 Rana Therapeutics Inc. Composés oligonucléotidiques multimères
EP2895200B1 (fr) 2012-09-14 2019-11-06 Translate Bio MA, Inc. Composés oligonucléotidiques multimères
US20150299803A1 (en) 2012-11-05 2015-10-22 Pronai Therapeutics, Inc. Methods of Using Biomarkers for the Treatment of Cancer by Modulation of BCL2 Expression
EP2920307B1 (fr) 2012-11-15 2018-05-02 Roche Innovation Center Copenhagen A/S Composés conjugués antisens anti-apob
WO2014108759A1 (fr) 2013-01-14 2014-07-17 Pierfrancesco Tassone Inhibiteurs des miarn 221 et 222 pour l'activité antitumorale dans le myélome multiple
DK2951305T3 (en) * 2013-01-30 2018-10-29 Hoffmann La Roche LNA oligonucleotide KULHYDRATKONJUGATER
AU2014259953B2 (en) 2013-05-01 2020-07-02 Regulus Therapeutics Inc. Compounds and methods for enhanced cellular uptake
CA2908939C (fr) 2013-05-01 2023-08-22 Balkrishen Bhat Composes microarn et procedes permettant la modulation de l'activite de mir-122
KR102226110B1 (ko) 2013-06-27 2021-03-10 로슈 이노베이션 센터 코펜하겐 에이/에스 Pcsk9 를 표적화하는 안티센스 올리고머 및 접합체
WO2015075166A1 (fr) 2013-11-22 2015-05-28 INSERM (Institut National de la Santé et de la Recherche Médicale) Méthodes et compositions pharmaceutiques pour traiter une infection bactérienne
US9765332B2 (en) 2014-01-29 2017-09-19 Inserm (Institut National De La Sante Et De La Recherche Medicale) Oligonucleotides and methods for inhibiting or reducing bacterial biofilms
WO2016041058A1 (fr) 2014-09-18 2016-03-24 The University Of British Columbia Thérapie allèle-spécifique pour les haplotypes de la maladie d'huntington
US20220354888A1 (en) 2016-08-03 2022-11-10 Aalborg Universitet ANTISENSE OLIGONUCLEOTIDES (ASOs) DESIGNED TO INHIBIT IMMUNE CHECKPOINT PROTEINS
WO2019076919A1 (fr) 2017-10-17 2019-04-25 INSERM (Institut National de la Santé et de la Recherche Médicale) Traitement combiné de la fibrose kystique
CA3099698A1 (fr) 2018-05-08 2019-11-14 Charles R. ALLERSON Oligonucleotide modifie conjugue a galnac en tant qu'inhibiteur de mir-122 ayant une activite antivirale contre le vhc a effet secondaire d'hyperbilirubinemie reduit
EP3997225A1 (fr) 2019-07-10 2022-05-18 INSERM (Institut National de la Santé et de la Recherche Médicale) Méthodes pour le traitement de l'épilepsie
IT201900017234A1 (it) 2019-09-25 2021-03-25 Int Centre For Genetic Engineering And Biotechnology Anti-miRNA per il trattamento del leiomioma
WO2021074657A1 (fr) 2019-10-17 2021-04-22 INSERM (Institut National de la Santé et de la Recherche Médicale) Traitement combiné contre la fibrose kystique
US20230016983A1 (en) 2019-11-19 2023-01-19 lNSERM (INSTITUT NATIONAL DE LA SANTÉ ET DE LA RECHERCHE MÉDICALE) Antisense oligonucleotides and thier use for the treatment of cancer
KR20230050336A (ko) 2020-07-10 2023-04-14 인스티튜트 내셔널 드 라 싼테 에 드 라 리셰르셰 메디칼르 (인 썸) 뇌전증을 치료하기 위한 방법과 조성물
KR20230144588A (ko) 2021-02-12 2023-10-16 머랜드 파마슈티칼스, 인크. 저산소증 및 허혈-관련 장애의 치료를 위한 작용제, 조성물 및 방법
CA3213391A1 (fr) 2021-03-26 2022-09-29 Markus Sakari Kauppinen Inhibiteurs de microarn-134
CA3213673A1 (fr) 2021-03-26 2022-09-29 Neumirna Therapeutics Aps Inhibiteurs de microarn-27 b
EP4347824A1 (fr) 2021-06-04 2024-04-10 Neumirna Therapeutics ApS Oligonucléotides antisens ciblant l'adénosine kinase
AU2022329834A1 (en) 2021-08-17 2024-03-07 Korea Advanced Institute Of Science And Technology Antisense oligonucleotide targeting cav3.1 gene and uses thereof
CN118265785A (zh) 2021-08-19 2024-06-28 神经微核糖核酸治疗有限公司 靶向腺苷激酶的反义寡核苷酸
WO2023152369A1 (fr) 2022-02-14 2023-08-17 INSERM (Institut National de la Santé et de la Recherche Médicale) Acide nucléique inhibiteur de mir-9 pour le traitement de la mucoviscidose
WO2024017990A1 (fr) 2022-07-21 2024-01-25 Institut National de la Santé et de la Recherche Médicale Méthodes et compositions pour le traitement de troubles de la douleur chronique
EP4332239A1 (fr) 2022-08-30 2024-03-06 Istituto Romagnolo per lo Studio dei Tumori "Dino Amadori" - IRST S.r.l. Analyse à base de mir pour le diagnostic et le pronostic des tumeurs neuroendocrines gastro-entéro-pancréatiques

Family Cites Families (2)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US5700922A (en) * 1991-12-24 1997-12-23 Isis Pharmaceuticals, Inc. PNA-DNA-PNA chimeric macromolecules
CN1273476C (zh) * 1997-09-12 2006-09-06 埃克西康有限公司 寡核苷酸类似物

Also Published As

Publication number Publication date
AU7406700A (en) 2001-05-10
WO2001025248A3 (fr) 2001-08-30
WO2001025248A2 (fr) 2001-04-12
JP2003511016A (ja) 2003-03-25
IL148916A0 (en) 2002-09-12
EP1224280A2 (fr) 2002-07-24

Similar Documents

Publication Publication Date Title
CA2385853A1 (fr) Conception d'un oligonucleotide de recrutement de rnase h a haute affinite
US9951333B2 (en) Antisense design
US5532130A (en) Methods and compositions for sequence-specific hybridization of RNA by 2'-5' oligonucleotides
JP2005522997A (ja) 交代セグメントを含むオリゴヌクレオチド及びその用途
DE69934227T2 (de) Auf Beta-Arabinose und dessen Analoga basierte Antisense-Oligonukleotide
RU2002105021A (ru) ОЛИГОНУКЛЕОТИДЫ ДЛЯ ИНГИБИРОВАНИЯ ЭКСПРЕССИИ eg5 ЧЕЛОВЕКА
CA2419563A1 (fr) Antisens chimerique d'analogues de l'arabinofuranose analogue et nucleotides de desoxyribose
Seitz Chemically Modified Antisense Oligonucleotides—Recent Improvements of RNA Binding and Ribonuclease H Recruitment
JP2021502059A (ja) 部分的に立体定義されたオリゴヌクレオチドのサブライブラリーを使用することによる、アンチセンスオリゴヌクレオチドの、改良された立体定義されたホスホロチオエートオリゴヌクレオチド変異体を同定するための方法
AU2015204315B2 (en) Amino-LNA, thio-LNA and alpha-L-oxy-LN
AU2013201786B2 (en) Amino-LNA, thio-LNA and alpha-L-oxy-LN
WO2024046937A1 (fr) Oligonucléotides antisens d'acide nucléique de thréose et procédés associés
JP2022521510A (ja) ホスホノアセテートギャップマー型オリゴヌクレオチド
Zamaratski Some Aspects of Nucleic Acids Chemistry

Legal Events

Date Code Title Description
FZDE Discontinued