AU2019271028B2 - Chemical compositions and methods of using same - Google Patents

Chemical compositions and methods of using same

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Publication number
AU2019271028B2
AU2019271028B2 AU2019271028A AU2019271028A AU2019271028B2 AU 2019271028 B2 AU2019271028 B2 AU 2019271028B2 AU 2019271028 A AU2019271028 A AU 2019271028A AU 2019271028 A AU2019271028 A AU 2019271028A AU 2019271028 B2 AU2019271028 B2 AU 2019271028B2
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AU
Australia
Prior art keywords
nucleic acid
domain
acid molecule
target
nucleotides
Prior art date
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Active
Application number
AU2019271028A
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English (en)
Other versions
AU2019271028A1 (en
Inventor
Joseph Beechem
Cassandra Burke
Yi Deng
Dwayne Dunaway
Mark Gregory
Margaret HOANG
Rustem KHAFIZOV
Dae Kim
Sanghamithra Korukonda
Elizabeth MANRAO
Mark Mcelwain
Gavin Meredith
Peter SKENE
Matthew Walsh
Current Assignee (The listed assignees may be inaccurate. Google has not performed a legal analysis and makes no representation or warranty as to the accuracy of the list.)
Bruker Spatial Biology Inc
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Bruker Spatial Biology Inc
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
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Publication of AU2019271028A1 publication Critical patent/AU2019271028A1/en
Assigned to BRUKER SPATIAL BIOLOGY, INC. reassignment BRUKER SPATIAL BIOLOGY, INC. Request for Assignment Assignors: NANOSTRING TECHNOLOGIES, INC.
Application granted granted Critical
Publication of AU2019271028B2 publication Critical patent/AU2019271028B2/en
Priority to AU2025283488A priority Critical patent/AU2025283488A1/en
Active legal-status Critical Current
Anticipated expiration legal-status Critical

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Classifications

    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6869—Methods for sequencing
    • C12Q1/6874—Methods for sequencing involving nucleic acid arrays, e.g. sequencing by hybridisation
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6813—Hybridisation assays
    • C12Q1/6839—Triple helix formation or other higher order conformations in hybridisation assays
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6869—Methods for sequencing
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6876—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2563/00—Nucleic acid detection characterized by the use of physical, structural and functional properties
    • C12Q2563/107—Nucleic acid detection characterized by the use of physical, structural and functional properties fluorescence
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2563/00—Nucleic acid detection characterized by the use of physical, structural and functional properties
    • C12Q2563/179—Nucleic acid detection characterized by the use of physical, structural and functional properties the label being a nucleic acid

Landscapes

  • Chemical & Material Sciences (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Organic Chemistry (AREA)
  • Zoology (AREA)
  • Health & Medical Sciences (AREA)
  • Engineering & Computer Science (AREA)
  • Wood Science & Technology (AREA)
  • Analytical Chemistry (AREA)
  • Microbiology (AREA)
  • Physics & Mathematics (AREA)
  • Molecular Biology (AREA)
  • Immunology (AREA)
  • Biotechnology (AREA)
  • Biophysics (AREA)
  • Biochemistry (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • General Engineering & Computer Science (AREA)
  • General Health & Medical Sciences (AREA)
  • Genetics & Genomics (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
AU2019271028A 2018-05-14 2019-05-14 Chemical compositions and methods of using same Active AU2019271028B2 (en)

Priority Applications (1)

Application Number Priority Date Filing Date Title
AU2025283488A AU2025283488A1 (en) 2018-05-14 2025-12-17 Chemical compositions and methods of using same

Applications Claiming Priority (5)

Application Number Priority Date Filing Date Title
US201862671091P 2018-05-14 2018-05-14
US62/671,091 2018-05-14
US201962836327P 2019-04-19 2019-04-19
US62/836,327 2019-04-19
PCT/US2019/032168 WO2019222178A1 (en) 2018-05-14 2019-05-14 Chemical compositions and methods of using same

Related Child Applications (1)

Application Number Title Priority Date Filing Date
AU2025283488A Division AU2025283488A1 (en) 2018-05-14 2025-12-17 Chemical compositions and methods of using same

Publications (2)

Publication Number Publication Date
AU2019271028A1 AU2019271028A1 (en) 2020-12-03
AU2019271028B2 true AU2019271028B2 (en) 2025-09-18

Family

ID=67002349

Family Applications (2)

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AU2019271028A Active AU2019271028B2 (en) 2018-05-14 2019-05-14 Chemical compositions and methods of using same
AU2025283488A Pending AU2025283488A1 (en) 2018-05-14 2025-12-17 Chemical compositions and methods of using same

Family Applications After (1)

Application Number Title Priority Date Filing Date
AU2025283488A Pending AU2025283488A1 (en) 2018-05-14 2025-12-17 Chemical compositions and methods of using same

Country Status (9)

Country Link
US (3) US11549139B2 (https=)
EP (2) EP3794146B1 (https=)
JP (2) JP7525402B2 (https=)
KR (2) KR20250171474A (https=)
CN (2) CN112703255B (https=)
AU (2) AU2019271028B2 (https=)
CA (1) CA3099909A1 (https=)
SG (1) SG11202011274YA (https=)
WO (1) WO2019222178A1 (https=)

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WO2016081740A1 (en) * 2014-11-21 2016-05-26 Nanostring Technologies, Inc. Enzyme- and amplification-free sequencing
EP4556575A3 (en) * 2016-11-21 2025-10-08 Bruker Spatial Biology, Inc. A method for sequencing nucleic acids
EP3794146B1 (en) 2018-05-14 2025-12-10 Bruker Spatial Biology, Inc. Method for identifying a predetermined nucleotide sequence
US12492427B2 (en) 2020-06-18 2025-12-09 Resolve Biosciences Gmbh Multiplex method for detecting different analytes in a sample
CA3192943A1 (en) * 2020-09-16 2022-03-24 Nanostring Technologies, Inc. Chemical compositions and methods of using the same
US20220316004A1 (en) * 2021-04-06 2022-10-06 Akoya Biosciences, Inc. Detection of labeled analytes in biological samples
EP4216220A1 (en) * 2022-01-25 2023-07-26 Leica Microsystems CMS GmbH Data storage device and method for storing data
EP4680764A2 (en) 2023-03-17 2026-01-21 Bruker Spatial Biology, Inc. Assay for recombinase accessible chromatin and related compositions and methods
WO2024196728A2 (en) 2023-03-17 2024-09-26 Nanostring Technologies, Inc. Nucleic acid probes for combined sequencing and spatial analysis
WO2025223677A1 (en) * 2024-04-26 2025-10-30 Helmholtz-Zentrum für Infektionsforschung GmbH Method for analyzing molecules of interest, method for automatically selecting electrical signals related to a set of known barcode molecules, signal processing unit and computer program for executing the method
CN119932194A (zh) * 2025-01-23 2025-05-06 上海市第十人民医院 一种用于靶标rna多重分析的共价荧光编码组装体、dna荧光条形码及应用

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WO2017201073A1 (en) * 2016-05-16 2017-11-23 Nanostring Technologies, Inc. Methods for detecting target nucleic acids in a sample

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