WO2022210308A1 - 環状リポペプチド産生微生物株、及び環状リポペプチドの製造方法 - Google Patents
環状リポペプチド産生微生物株、及び環状リポペプチドの製造方法 Download PDFInfo
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- 159000000003 magnesium salts Chemical class 0.000 description 1
- WRUGWIBCXHJTDG-UHFFFAOYSA-L magnesium sulfate heptahydrate Chemical compound O.O.O.O.O.O.O.[Mg+2].[O-]S([O-])(=O)=O WRUGWIBCXHJTDG-UHFFFAOYSA-L 0.000 description 1
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- CNFDGXZLMLFIJV-UHFFFAOYSA-L manganese(II) chloride tetrahydrate Chemical compound O.O.O.O.[Cl-].[Cl-].[Mn+2] CNFDGXZLMLFIJV-UHFFFAOYSA-L 0.000 description 1
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- 150000002830 nitrogen compounds Chemical class 0.000 description 1
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- 230000035945 sensitivity Effects 0.000 description 1
- IFGCUJZIWBUILZ-UHFFFAOYSA-N sodium 2-[[2-[[hydroxy-(3,4,5-trihydroxy-6-methyloxan-2-yl)oxyphosphoryl]amino]-4-methylpentanoyl]amino]-3-(1H-indol-3-yl)propanoic acid Chemical compound [Na+].C=1NC2=CC=CC=C2C=1CC(C(O)=O)NC(=O)C(CC(C)C)NP(O)(=O)OC1OC(C)C(O)C(O)C1O IFGCUJZIWBUILZ-UHFFFAOYSA-N 0.000 description 1
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- WPLOVIFNBMNBPD-ATHMIXSHSA-N subtilin Chemical compound CC1SCC(NC2=O)C(=O)NC(CC(N)=O)C(=O)NC(C(=O)NC(CCCCN)C(=O)NC(C(C)CC)C(=O)NC(=C)C(=O)NC(CCCCN)C(O)=O)CSC(C)C2NC(=O)C(CC(C)C)NC(=O)C1NC(=O)C(CCC(N)=O)NC(=O)C(CC(C)C)NC(=O)C(NC(=O)C1NC(=O)C(=C/C)/NC(=O)C(CCC(N)=O)NC(=O)C(CC(C)C)NC(=O)C(C)NC(=O)CNC(=O)C(NC(=O)C(NC(=O)C2NC(=O)CNC(=O)C3CCCN3C(=O)C(NC(=O)C3NC(=O)C(CC(C)C)NC(=O)C(=C)NC(=O)C(CCC(O)=O)NC(=O)C(NC(=O)C(CCCCN)NC(=O)C(N)CC=4C5=CC=CC=C5NC=4)CSC3)C(C)SC2)C(C)C)C(C)SC1)CC1=CC=CC=C1 WPLOVIFNBMNBPD-ATHMIXSHSA-N 0.000 description 1
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- 238000001262 western blot Methods 0.000 description 1
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- C12N15/09—Recombinant DNA-technology
- C12N15/63—Introduction of foreign genetic material using vectors; Vectors; Use of hosts therefor; Regulation of expression
- C12N15/74—Vectors or expression systems specially adapted for prokaryotic hosts other than E. coli, e.g. Lactobacillus, Micromonospora
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Definitions
- the cyclic lipopeptide is one or more cyclic lipopeptides selected from surfactin-based cyclic lipopeptides, iturin-based cyclic lipopeptides, and phenzicin-based cyclic lipopeptides, [1] to [5] ]
- the microorganism strain according to any one of [7] The microbial strain according to any one of [1] to [6], wherein the cyclic lipopeptide is surfactin.
- amino acid substitutions are preferably conservative amino acid substitutions.
- a “conservative amino acid substitution” refers to a substitution between amino acids having similar properties such as charge, side chain, polarity, and aromaticity.
- Production of the target cyclic lipopeptide by the method of the present invention is carried out by inoculating the above-mentioned microbial strain into a medium containing assimilable carbon source, nitrogen source, and other essential components, culturing by a normal microbial culture method, and culturing. After completion, the desired cyclic lipopeptide may be purified.
- Carbon sources include glucose, maltose, sucrose, hydrolyzed starch, molasses, potato extract, malt, peat, vegetable oil, corn steep liquor, fructose, syrup, liquid sugar, invert sugar, alcohol, Organic acids, organic acid salts, alkanes or other common carbon sources can be used. These carbon sources can be used alone or in combination, with glucose or maltose being preferred.
- the above carbon source can be used at a concentration of about 0.01 to 50 w/w%, preferably about 1 to 40 w/w%.
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Abstract
Description
[1]以下の(1)又は(2)の少なくとも1つの遺伝子が欠損した環状リポペプチド産生微生物株。
(1)ベタインアルデヒドデヒドロゲナーゼ(EC:1.2.1.8)をコードする遺伝子
(2)コリンデヒドロゲナーゼ(EC:1.1.1.1)をコードする遺伝子
[2]前記微生物株が、細菌を宿主とする組換え微生物株である、[1]に記載の微生物株。
[3]前記細菌が、グラム陽性細菌である、[2]に記載の微生物株。
[4]前記グラム陽性細菌が、バチルス(Bacillus)属細菌である、[3]に記載の微生物株。
[5]前記バチルス(Bacillus)属細菌が、バチルス・サブチリス(Bacillus subtilis)である、[4]に記載の微生物株。
[6]前記環状リポペプチドが、サーファクチン系環状リポペプチド、イツリン系環状リポペプチド、及びフェンジシン系環状リポペプチドから選ばれる1種又は2種以上の環状リポペプチドである、[1]~[5]のいずれかに記載の微生物株。
[7]前記環状リポペプチドが、サーファクチンである、[1]~[6]のいずれかに記載の微生物株。
[8][1]~[7]のいずれかに記載の微生物株を培地中で培養することを含む環状リポペプチドの製造方法。
[9]前記培地が、豆類の粉砕物又はその抽出物を含む、[8]に記載の環状リポペプチドの製造方法。
[10]前記豆類が大豆である、[9]に記載の環状リポペプチドの製造方法。
本願は、2021年3月29日に出願された日本国特許出願2021-56115号の優先権を主張するものであり、当該特許出願の明細書に記載される内容を包含する。
本発明の1以上の実施形態に係る、(1)ベタインアルデヒドデヒドロゲナーゼ(EC:1.2.1.8)をコードする遺伝子(遺伝子名:gbsA)又は(2)コリンデヒドロゲナーゼ(EC:1.1.1.1)をコードする遺伝子(遺伝子名:gbsB)の少なくとも1つの遺伝子が欠損した微生物株の、宿主(親株)となる微生物は、好ましくは細菌であり、より好ましくはグラム陽性細菌であり、更に好ましくはバチルス(Bacillus)属、パエニバチルス(Paenibacillus)属、ブレビバチルス(Brevibacillus)属、チューメバチルス(Tumebacillus)属、ストレプトマイセス(Streptomyces)属に属する細菌であり、更により好ましくはバチルス(Bacillus)属細菌であり、特に好ましくはBacillus subtilis、Bacillus velezensis、Bacillus amyloliquefaciens、Bacillus siamensis、Bacillus atrophaeus、Bacillus vallismortis、Bacillus sonorensis、Bacillus halotolerans、Bacillus anthracis、Bacillus cereus、Bacillus thuringiensis、Bacillus mycoides、Bacillus licheniformis、Bacillus paralicheniformis、Bacillus swezeyi、Bacillus genomospecies、Bacillus methylotrophicusであり、最も好ましくは、Bacillus subtilisである。なお、これらの宿主(親株)となる微生物は、野生型でも変異を施したものでもよい。
多くの細菌、植物、動物において、細胞内の浸透圧を調節するベタインは、いくつかの経路で合成されることが知られており、そのうちの一つが、(i)コリンからベタインアルデヒドへの変換と、(ii)ベタインアルデヒドからベタインへの変換の2段階で合成される経路である。ベタインアルデヒドデヒドロゲナーゼ(EC:1.2.1.8)は、この2段階目の反応を触媒する酵素であり、NAD+を補酵素としてグリシンベタインアルデヒドをグリシンベタインに変換する。
(1A)配列番号2に示すアミノ酸配列からなるポリペプチド;
(1B)配列番号2に示すアミノ酸配列において、1~複数個のアミノ酸が付加、欠失、又は置換されたアミノ酸配列からなるポリペプチド(特に好ましくは、配列番号2に示すアミノ酸配列のN末端及びC末端の一方又は両方において合計で1~複数個のアミノ酸が置換、欠失及び/又は付加、好ましくは欠失及び/又は付加したアミノ酸配列からなるポリペプチド)であって、ベタインアルデヒドデヒドロゲナーゼ活性を有するポリペプチド;
(1C)配列番号2に示すアミノ酸配列に対して80%以上、好ましくは85%以上、より好ましくは90%以上、95%以上、97%以上、98%以上又は99%以上の配列同一性を有するアミノ酸配列からなるポリペプチドであって、ベタインアルデヒドデヒドロゲナーゼ活性を有するポリペプチド;又は
(1D)(1A)~(1C)のいずれかのポリペプチドの、ベタインアルデヒドデヒドロゲナーゼ活性を有する断片が挙げられる。
(1E)配列番号1に示す塩基配列;
(1F)配列番号1に示す塩基配列において、1~複数個の塩基が付加、欠失、又は置換された塩基配列(特に好ましくは、配列番号1に示す塩基配列の5’末端及び3’末端の一方又は両方において合計で1~複数個の塩基が置換、欠失及び/又は付加、好ましくは欠失及び/又は付加した塩基配列)であって、ベタインアルデヒドデヒドロゲナーゼ活性を有するポリペプチドをコードする塩基配列;
(1G)配列番号1に示す塩基配列に対して80%以上、好ましくは85%以上、より好ましくは90%以上、95%以上、97%以上、98%以上又は99%以上の配列同一性を有する塩基配列であって、ベタインアルデヒドデヒドロゲナーゼ活性を有するポリペプチドをコードする塩基配列;
(1H)(1E)~(1G)のいずれかの塩基配列の、ベタインアルデヒドデヒドロゲナーゼ活性を有するポリペプチドのアミノ酸配列をコードする部分塩基配列;
(1I)(1E)~(1H)のいずれかの塩基配列において、サイレント変異(コードするアミノ酸残基を変化しない塩基置換)が導入された塩基配列;
(1J)(1A)~(1D)のいずれかのポリペプチドのアミノ酸配列をコードする塩基配列;又は、
(1K)(1E)~(1J)のいずれかの塩基配列をエキソン配列とし、途中に1以上のイントロン配列が介在している塩基配列が挙げられる。
コリンデヒドロゲナーゼ(EC:1.1.1.1)は、前述のグリシンベタイン合成経路のうち、1段階目の反応を触媒する酵素であり、NAD+を補酵素としてコリンをグリシンベタインアルデヒドに変換する。
(2A)配列番号4に示すアミノ酸配列からなるポリペプチド;
(2B)配列番号4に示すアミノ酸配列において、1~複数個のアミノ酸が付加、欠失、又は置換されたアミノ酸配列からなるポリペプチド(特に好ましくは、配列番号4に示すアミノ酸配列のN末端及びC末端の一方又は両方において合計で1~複数個のアミノ酸が置換、欠失及び/又は付加、好ましくは欠失及び/又は付加したアミノ酸配列からなるポリペプチド)であって、コリンデヒドロゲナーゼ活性を有するポリペプチド;
(2C)配列番号4に示すアミノ酸配列に対して80%以上、好ましくは85%以上、より好ましくは90%以上、95%以上、97%以上、98%以上又は99%以上の配列同一性を有するアミノ酸配列からなるポリペプチドであって、コリンデヒドロゲナーゼ活性を有するポリペプチド;又は
(2D)(2A)~(2C)のいずれかのポリペプチドの、コリンデヒドロゲナーゼ活性を有する断片が挙げられる。
(2E)配列番号3に示す塩基配列;
(2F)配列番号3に示す塩基配列において、1~複数個の塩基が付加、欠失、又は置換された塩基配列(特に好ましくは、配列番号3に示す塩基配列の5’末端及び3’末端の一方又は両方において合計で1~複数個の塩基が置換、欠失及び/又は付加、好ましくは欠失及び/又は付加した塩基配列)であって、コリンデヒドロゲナーゼ活性を有するポリペプチドをコードする塩基配列;
(2G)配列番号3に示す塩基配列に対して80%以上、好ましくは85%以上、より好ましくは90%以上、95%以上、97%以上、98%以上又は99%以上の配列同一性を有する塩基配列であって、コリンデヒドロゲナーゼ活性を有するポリペプチドをコードする塩基配列;
(2H)(2E)~(2G)のいずれかの塩基配列の、コリンデヒドロゲナーゼ活性を有するポリペプチドのアミノ酸配列をコードする部分塩基配列;
(2I)(2E)~(2H)のいずれかの塩基配列において、サイレント変異(コードするアミノ酸残基を変化しない塩基置換)が導入された塩基配列;
(2J)(2A)~(2D)のいずれかのポリペプチドのアミノ酸配列をコードする塩基配列;又は、
(2K)(2E)~(2J)のいずれかの塩基配列をエキソン配列とし、途中に1以上のイントロン配列が介在している塩基配列が挙げられる。
本発明の1以上の実施形態に係る微生物株は、(1)ベタインアルデヒドデヒドロゲナーゼ(EC:1.2.1.8)をコードする遺伝子(gbsA遺伝子)又は(2)コリンデヒドロゲナーゼ(EC:1.1.1.1)をコードする遺伝子(gbsB遺伝子)の少なくとも1つの遺伝子が欠損した微生物株である。遺伝子の欠損は、gbsA遺伝子又はgbsB遺伝子のいずれか1つの遺伝子であってもよく、両方の遺伝子であってもよい。
本発明の更なる1以上の実施形態は、前記の本発明の1以上の実施形態に係る微生物株を培養することを含む、環状リポペプチドの製造方法に関する。
環状リポペプチド生産株の宿主となるBL002株を作製した。具体的には、Bacillus subtilis 168株(以下、「168株」と記載することがある)に環状リポペプチド生産能を付与するために、4-phosphopantetheinyl transferaseをコードするlpa-14(J. Ferment. Bioeng., 76 :6, 445-450(1993))を染色体上に導入した菌株を作製した。
まず、gbsA遺伝子座位にスペクチノマイシン耐性カセットを挿入するためのDNA断片を作製した。合成オリゴDNAを用いたPCRにより、gbsA遺伝子の上流配列、下流配列とスペクチノマイシン耐性カセットを有するDNA断片(配列番号6:gbsAUD-spec)を得た。
まず、BL002 gbsA::spec株からスペクチノマイシン耐性カセットを脱落させるためのDNA断片を作製した。合成オリゴDNAを用いたPCRにより、gbsA遺伝子の上流配列、下流配列を有するDNA断片(配列番号7:gbsAUD)を得た。
まず、gbsB遺伝子を破壊するためのDNA断片を作製した。合成オリゴDNAを用いたPCRにより、gbsB遺伝子の上流配列、下流配列とスペクチノマイシン耐性カセットを有するDNA断片(配列番号8:gbsBUD-spec)を得た。
まず、gbsA遺伝子とgbsB遺伝子を破壊するためのDNA断片を作製した。合成オリゴDNAを用いたPCRにより、gbsA遺伝子の上流配列、gbsB遺伝子の下流配列とスペクチノマイシン耐性カセットを有するDNA断片(配列番号9:gbsAU-spec-gbsBD)を得た。
製造例3で取得したBL002ΔgbsA株を以下の条件で培養し、サーファクチンを生産した。
サンプル量:20μl
カラム:ODS-2、4.6mm×250mm、GLサイエンス社製
カラム温度:40℃
溶離液:80v/v%アセトニトリル、3.8mM トリフルオロ酢酸
流速:1.5ml/min
検出器:UV検出器
波長:205nm
製造例4で取得したBL002ΔgbsB株を実施例1と同様の条件で培養し、サーファクチンを生産した。ただし、前培養のLB培地は5μg/mLクロラムフェニコール、100μg/mLスペクチノマイシン二塩酸塩五水和物を含むものを使用した。得られた培養液を用い、培養液中のサーファクチン濃度を、実施例1と同様に分析した。
製造例5で取得したBL002ΔgbsAB株を実施例2と同様の条件で培養し、サーファクチンを生産した。培養液中のサーファクチン濃度を、実施例1と同様に分析した。
製造例1で取得したBL002株を実施例1と同様の条件で培養し、サーファクチンを生産した。培養液中のサーファクチン濃度を、実施例1と同様に分析した。
本明細書で引用した全ての刊行物、特許及び特許出願をそのまま参考として本明細書に組み入れるものとする。
Claims (10)
- 以下の(1)又は(2)の少なくとも1つの遺伝子が欠損した環状リポペプチド産生微生物株。
(1)ベタインアルデヒドデヒドロゲナーゼ(EC:1.2.1.8)をコードする遺伝子
(2)コリンデヒドロゲナーゼ(EC:1.1.1.1)をコードする遺伝子 - 前記微生物株が、細菌を宿主とする組換え微生物株である、請求項1に記載の微生物株。
- 前記細菌が、グラム陽性細菌である、請求項2に記載の微生物株。
- 前記グラム陽性細菌が、バチルス(Bacillus)属細菌である、請求項3に記載の微生物株。
- 前記バチルス(Bacillus)属細菌が、バチルス・サブチリス(Bacillus subtilis)である、請求項4に記載の微生物株。
- 前記環状リポペプチドが、サーファクチン系環状リポペプチド、イツリン系環状リポペプチド、及びフェンジシン系環状リポペプチドから選ばれる1種又は2種以上の環状リポペプチドである、請求項1~5のいずれか1項に記載の微生物株。
- 前記環状リポペプチドが、サーファクチンである、請求項1~6のいずれか1項に記載の微生物株。
- 請求項1~7のいずれか1項に記載の微生物株を培地中で培養することを含む環状リポペプチドの製造方法。
- 前記培地が、豆類の粉砕物又はその抽出物を含む、請求項8に記載の環状リポペプチドの製造方法。
- 前記豆類が大豆である、請求項9に記載の環状リポペプチドの製造方法。
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Citations (4)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
WO1998014600A1 (es) | 1996-10-03 | 1998-04-09 | Centro De Ingenieria Genetica Y Biotecnologia (Cigb) | SISTEMA DE TRANSFORMACION EN $i(CANDIDA UTILIS) |
JP3030789B2 (ja) | 1990-06-22 | 2000-04-10 | エニリチェルケ・ソシエタ・ペル・アチオニ | バシラス・サチリス突然変異株及び該変異株の使用によるサーファクチンの製法 |
JP3635638B2 (ja) | 2000-09-29 | 2005-04-06 | 昭和電工株式会社 | サーファクチンの製造法 |
JP2021056115A (ja) | 2019-09-30 | 2021-04-08 | 日本信号株式会社 | 測距装置 |
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2023
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Patent Citations (4)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
JP3030789B2 (ja) | 1990-06-22 | 2000-04-10 | エニリチェルケ・ソシエタ・ペル・アチオニ | バシラス・サチリス突然変異株及び該変異株の使用によるサーファクチンの製法 |
WO1998014600A1 (es) | 1996-10-03 | 1998-04-09 | Centro De Ingenieria Genetica Y Biotecnologia (Cigb) | SISTEMA DE TRANSFORMACION EN $i(CANDIDA UTILIS) |
JP3635638B2 (ja) | 2000-09-29 | 2005-04-06 | 昭和電工株式会社 | サーファクチンの製造法 |
JP2021056115A (ja) | 2019-09-30 | 2021-04-08 | 日本信号株式会社 | 測距装置 |
Non-Patent Citations (14)
Title |
---|
"Molecular Cloning", 1989, COLD SPRING HARBOR LABORATORY PRESS |
"Molecular cloning", 2001, COLD SPRING HARBOR LABORATORY PRESS |
ALTSCHUL, S. F. ET AL., J. MOL. BIOL., vol. 215, 1990, pages 403 - 410 |
APPL. MICROBIOL. BIOTECH., vol. 31, 1989, pages 486 - 489 |
BOCH J, KEMPF B, SCHMID R, BREMER E: "Synthesis of the osmoprotectant glycine betaine in Bacillus subtilis: characterization of the gbsAB genes", JOURNAL OF BACTERIOLOGY, AMERICAN SOCIETY FOR MICROBIOLOGY, US, vol. 178, no. 17, 1 September 1996 (1996-09-01), US , pages 5121 - 5129, XP055971954, ISSN: 0021-9193, DOI: 10.1128/jb.178.17.5121-5129.1996 * |
CURR. GENET., vol. 10, no. 8, 1986, pages 573 - 578 |
FEMS MICROBIOLOGY LETTERS, vol. 165, 1998, pages 335 - 340 |
HUANG, C.-C. ; ANO, T. ; SHODA, M.: "Nucleotide sequence and characteristics of the gene, lpa-14, responsible for biosynthesis of the lipopeptide antibiotics iturin A and surfactin from Bacillus subtilis RB14", JOURNAL OF FERMENTATION AND BIOENGINEERING., SOCIETY OF FERMENTATION TECHNOLOGY., JP, vol. 76, no. 6, 1 January 1993 (1993-01-01), JP , pages 445 - 450, XP023572812, ISSN: 0922-338X, DOI: 10.1016/0922-338X(93)90238-4 * |
J. FERMENT. BIOENG., vol. 76, no. 6, 1993, pages 445 - 450 |
JOURNAL OF BACTERIOLOGY, December 1995 (1995-12-01), pages 7171 - 7177 |
KARLIN, S. ET AL., PROC. NATL. ACAD. SCI., U.S.A., vol. 90, 1993, pages 5873 - 5877 |
MULLIGAN C N, CHOW T Y-K, GIBBS B F: "ENHANCED BIOSURFACTANT PRODUCTION BY A MUTANT BACILLUS SUBTILIS STRAIN", APPLIED MICROBIOLOGY AND BIOTECHNOLOGY, SPRINGER BERLIN HEIDELBERG, BERLIN/HEIDELBERG, vol. 31, no. 5-6, 1 January 1989 (1989-01-01), Berlin/Heidelberg, pages 486 - 489, XP008010002, ISSN: 0175-7598, DOI: 10.1007/BF00270781 * |
PEARSON, W. R. ET AL., PROC. NATL. ACAD. SCI., U.S.A., vol. 85, 1988, pages 2444 - 2448 |
WILLENBACHER JUDIT; MOHR TERESA; HENKEL MARIUS; GEBHARD SUSANNE; MASCHER THORSTEN; SYLDATK CHRISTOPH; HAUSMANN RUDOLF: "Substitution of the native srfA promoter by constitutive Pveg in two B. subtilis strains and evaluation of the effect on Surfactin production", JOURNAL OF BIOTECHNOLOGY, ELSEVIER, AMSTERDAM NL, vol. 224, 4 March 2016 (2016-03-04), Amsterdam NL , pages 14 - 17, XP029483594, ISSN: 0168-1656, DOI: 10.1016/j.jbiotec.2016.03.002 * |
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