SG11201602063UA - Multiaptamer target detection - Google Patents

Multiaptamer target detection

Info

Publication number
SG11201602063UA
SG11201602063UA SG11201602063UA SG11201602063UA SG11201602063UA SG 11201602063U A SG11201602063U A SG 11201602063UA SG 11201602063U A SG11201602063U A SG 11201602063UA SG 11201602063U A SG11201602063U A SG 11201602063UA SG 11201602063U A SG11201602063U A SG 11201602063UA
Authority
SG
Singapore
Prior art keywords
multiaptamer
target detection
target
detection
multiaptamer target
Prior art date
Application number
SG11201602063UA
Other languages
English (en)
Inventor
Urs A Ochsner
Louis S Green
Larry Gold
Nebojsa Janjic
Original Assignee
Somalogic Inc
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Somalogic Inc filed Critical Somalogic Inc
Publication of SG11201602063UA publication Critical patent/SG11201602063UA/en

Links

Classifications

    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12NMICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N15/00Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
    • C12N15/09Recombinant DNA-technology
    • C12N15/11DNA or RNA fragments; Modified forms thereof; Non-coding nucleic acids having a biological activity
    • C12N15/115Aptamers, i.e. nucleic acids binding a target molecule specifically and with high affinity without hybridising therewith ; Nucleic acids binding to non-nucleic acids, e.g. aptamers
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12NMICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N15/00Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
    • C12N15/09Recombinant DNA-technology
    • C12N15/10Processes for the isolation, preparation or purification of DNA or RNA
    • C12N15/1034Isolating an individual clone by screening libraries
    • C12N15/1048SELEX
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6813Hybridisation assays
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12NMICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N2310/00Structure or type of the nucleic acid
    • C12N2310/10Type of nucleic acid
    • C12N2310/16Aptamers
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12NMICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N2310/00Structure or type of the nucleic acid
    • C12N2310/30Chemical structure
    • C12N2310/33Chemical structure of the base
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12NMICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N2320/00Applications; Uses
    • C12N2320/10Applications; Uses in screening processes
    • C12N2320/13Applications; Uses in screening processes in a process of directed evolution, e.g. SELEX, acquiring a new function
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2525/00Reactions involving modified oligonucleotides, nucleic acids, or nucleotides
    • C12Q2525/10Modifications characterised by
    • C12Q2525/205Aptamer

Landscapes

  • Life Sciences & Earth Sciences (AREA)
  • Health & Medical Sciences (AREA)
  • Engineering & Computer Science (AREA)
  • Chemical & Material Sciences (AREA)
  • Genetics & Genomics (AREA)
  • Organic Chemistry (AREA)
  • Wood Science & Technology (AREA)
  • Zoology (AREA)
  • Biomedical Technology (AREA)
  • Biotechnology (AREA)
  • General Engineering & Computer Science (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Molecular Biology (AREA)
  • Biophysics (AREA)
  • Biochemistry (AREA)
  • Microbiology (AREA)
  • General Health & Medical Sciences (AREA)
  • Physics & Mathematics (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Plant Pathology (AREA)
  • Analytical Chemistry (AREA)
  • Immunology (AREA)
  • Bioinformatics & Computational Biology (AREA)
  • Crystallography & Structural Chemistry (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
  • Pharmaceuticals Containing Other Organic And Inorganic Compounds (AREA)
  • Plural Heterocyclic Compounds (AREA)
SG11201602063UA 2013-09-24 2014-09-24 Multiaptamer target detection SG11201602063UA (en)

Applications Claiming Priority (2)

Application Number Priority Date Filing Date Title
US201361881629P 2013-09-24 2013-09-24
PCT/US2014/057143 WO2015048084A1 (en) 2013-09-24 2014-09-24 Multiaptamer target detection

Publications (1)

Publication Number Publication Date
SG11201602063UA true SG11201602063UA (en) 2016-04-28

Family

ID=52744404

Family Applications (1)

Application Number Title Priority Date Filing Date
SG11201602063UA SG11201602063UA (en) 2013-09-24 2014-09-24 Multiaptamer target detection

Country Status (13)

Country Link
US (2) US9926566B2 (de)
EP (1) EP3049523B1 (de)
JP (1) JP6506768B2 (de)
KR (1) KR102348283B1 (de)
CN (2) CN114703193A (de)
AU (1) AU2014326975B2 (de)
BR (1) BR112016005957A2 (de)
CA (1) CA2924987C (de)
HK (1) HK1218765A1 (de)
IL (1) IL244284B (de)
MX (1) MX361451B (de)
SG (1) SG11201602063UA (de)
WO (1) WO2015048084A1 (de)

Families Citing this family (23)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
CA2924987C (en) 2013-09-24 2022-08-16 Somalogic, Inc. Multiaptamer target detection
JP6768651B2 (ja) 2014-11-24 2020-10-14 ソマロジック, インコーポレイテッドSomaLogic, Inc. 増殖分化因子11と結合するための核酸化合物
ES2911421T3 (es) * 2015-12-08 2022-05-19 Twinstrand Biosciences Inc Adaptadores, métodos y composiciones mejorados para secuenciación dúplex
WO2017160672A1 (en) 2016-03-14 2017-09-21 Somalogic, Inc. Compounds and methods for the synthesis of 5-(n-protected-tryptaminocarboxyamide)-2'-deoxyuridine phosphoramidate for incorporation into a nucleic sequence
JP2019521680A (ja) * 2016-06-17 2019-08-08 プロクシミティー バイオサイエンシズ,エルエルシー アプタマーペアを選択する方法
DK3478843T3 (da) * 2016-07-01 2021-08-30 Somalogic Inc Oligonukleotider omfattende modificerede nukleosider
JP2020514746A (ja) 2016-12-01 2020-05-21 ノーティラス バイオテクノロジー インコーポレイテッド タンパク質をアッセイする方法
WO2019103131A1 (ja) * 2017-11-24 2019-05-31 国立大学法人 東京大学 アプタマーの結合部位判別方法、アプタマーペアおよび目的物質からなる三元錯体の解離定数等の測定方法並びに最適なアプタマーペアの選択方法
BR112020026129B1 (pt) * 2018-06-22 2023-10-10 Somalogic Operating Co., Inc Métodos para melhorar o desempenho de ensaios proteômicos multiplex
WO2021252800A1 (en) 2020-06-11 2021-12-16 Nautilus Biotechnology, Inc. Methods and systems for computational decoding of biological, chemical, and physical entities
CA3203106A1 (en) 2021-01-20 2022-07-28 Parag Mallick Systems and methods for biomolecule quantitation
EP4281775A1 (de) 2021-01-21 2023-11-29 Nautilus Subsidiary, Inc. Systeme und verfahren zur biomolekülherstellung
KR20230169143A (ko) 2021-03-11 2023-12-15 노틸러스 서브시디어리, 인크. 생체분자 보유를 위한 시스템 및 방법
AU2022341171A1 (en) 2021-09-09 2024-02-22 Nautilus Subsidiary, Inc. Characterization and localization of protein modifications
CA3227592A1 (en) 2021-09-22 2023-03-30 Gregory KAPP Methods and systems for determining polypeptide interactions
US20230149883A1 (en) 2021-11-03 2023-05-18 Nautilus Biotechnology, Inc. Systems and methods for surface structuring
WO2023192917A1 (en) 2022-03-29 2023-10-05 Nautilus Subsidiary, Inc. Integrated arrays for single-analyte processes
US20230360732A1 (en) 2022-04-25 2023-11-09 Nautilus Subsidiary, Inc. Systems and methods for assessing and improving the quality of multiplex molecular assays
WO2023250364A1 (en) 2022-06-21 2023-12-28 Nautilus Subsidiary, Inc. Method for detecting analytes at sites of optically non-resolvable distances
US20240094215A1 (en) 2022-09-15 2024-03-21 Nautilus Subsidiary, Inc. Characterizing accessibility of macromolecule structures
WO2024073599A1 (en) 2022-09-29 2024-04-04 Nautilus Subsidiary, Inc. Preparation of array surfaces for single-analyte processes
US20240183858A1 (en) 2022-11-15 2024-06-06 Nautilus Subsidiary, Inc. Standard polypeptides
WO2024124073A1 (en) 2022-12-09 2024-06-13 Nautilus Subsidiary, Inc. A method comprising performing on a single-analyte array at least 50 cycles of a process

Family Cites Families (21)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
AU2001257091A1 (en) * 2000-04-18 2001-10-30 Gilead Sciences, Inc. Aptamer based two-site binding assay
EP2351855A1 (de) * 2000-09-26 2011-08-03 Duke University RNA-Aptamere und Verfahren zu ihrer Identifizierung
US20070071744A1 (en) * 2002-06-07 2007-03-29 Gotz Munch Agents which bind to epitopes of glycoprotein VI
US7595160B2 (en) 2004-01-13 2009-09-29 U.S. Genomics, Inc. Analyte detection using barcoded polymers
US7795009B2 (en) * 2005-06-15 2010-09-14 Saint Louis University Three-component biosensors for detecting macromolecules and other analytes
WO2007056250A2 (en) 2005-11-04 2007-05-18 U.S. Genomics, Inc. Heterogeneous assay of analytes in solution using polymers
WO2008039642A2 (en) 2006-09-26 2008-04-03 Replidyne, Inc. Methods and compounds for treatment of clostridium based infection
US7947447B2 (en) 2007-01-16 2011-05-24 Somalogic, Inc. Method for generating aptamers with improved off-rates
KR101747665B1 (ko) * 2007-07-17 2017-06-15 소마로직, 인크. 시료의 다중분석
WO2009037264A2 (en) 2007-09-17 2009-03-26 Da Volterra Colonic delivery of antimicrobial agents
US8569252B2 (en) 2009-04-15 2013-10-29 Postech Academy-Industry Foundation Nucleolin specific aptamer and use thereof
EP2534164A4 (de) 2010-02-11 2013-09-11 Intelligent Med Devices Inc Oligonukleotide im zusammenhang mit für toxin b, toxin a oder binäres toxin kodierenden clostridium-difficile-genen
GB201002627D0 (en) 2010-02-16 2010-03-31 Loxbridge Res Llp Aptamer based analyte detection method
EP2558586B1 (de) * 2010-04-12 2016-10-12 Somalogic, Inc. APTAMERE FÜR ß-NGF UND IHRE VERWENDUNG BEI DER BEHANDLUNG VON DURCH ß-NGF VERMITTELTEN KRANKHEITEN UND LEIDEN
US8785132B2 (en) * 2010-04-23 2014-07-22 Postech Academy-Industry Foundation Aptamer sandwich assays
US20150031585A1 (en) 2011-03-10 2015-01-29 Somalogic, Inc. Multiaptamer Target Detection
KR20140015455A (ko) * 2011-03-10 2014-02-06 소마로직, 인크. 클로스트리디움 디피실 진단을 위한 압타머
AU2012249658A1 (en) * 2011-04-26 2013-05-09 Regado Biosciences, Inc. A method for manufacturing pegylated oligonucleotides
MX2014003153A (es) * 2011-09-30 2014-04-30 Somalogic Inc Prediccion de riesgo de evento cardiovascular y usos del mismo.
US9651556B2 (en) 2011-12-30 2017-05-16 Quest Diagnostics Investments Incorporated Aptamers and diagnostic methods for detecting the EGF receptor
CA2924987C (en) 2013-09-24 2022-08-16 Somalogic, Inc. Multiaptamer target detection

Also Published As

Publication number Publication date
US9926566B2 (en) 2018-03-27
EP3049523B1 (de) 2019-08-07
HK1218765A1 (zh) 2017-03-10
CA2924987C (en) 2022-08-16
KR20160058777A (ko) 2016-05-25
CN105555957A (zh) 2016-05-04
MX361451B (es) 2018-12-06
WO2015048084A1 (en) 2015-04-02
EP3049523A4 (de) 2017-05-17
CN114703193A (zh) 2022-07-05
AU2014326975A1 (en) 2016-04-07
US10392621B2 (en) 2019-08-27
JP6506768B2 (ja) 2019-04-24
AU2014326975B2 (en) 2020-05-07
EP3049523A1 (de) 2016-08-03
CA2924987A1 (en) 2015-04-02
AU2014326975A2 (en) 2017-01-05
BR112016005957A2 (pt) 2017-09-26
US20160237435A1 (en) 2016-08-18
US20180187197A1 (en) 2018-07-05
IL244284B (en) 2019-12-31
MX2016003320A (es) 2016-05-31
IL244284A0 (en) 2016-04-21
JP2016531593A (ja) 2016-10-13
KR102348283B1 (ko) 2022-01-10

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