JP2021006028A5 - - Google Patents

Download PDF

Info

Publication number
JP2021006028A5
JP2021006028A5 JP2020135592A JP2020135592A JP2021006028A5 JP 2021006028 A5 JP2021006028 A5 JP 2021006028A5 JP 2020135592 A JP2020135592 A JP 2020135592A JP 2020135592 A JP2020135592 A JP 2020135592A JP 2021006028 A5 JP2021006028 A5 JP 2021006028A5
Authority
JP
Japan
Prior art keywords
labeled
rca
substrate
rca products
products
Prior art date
Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
Granted
Application number
JP2020135592A
Other languages
English (en)
Japanese (ja)
Other versions
JP7091400B2 (ja
JP2021006028A (ja
Filing date
Publication date
Priority claimed from GB1321196.6A external-priority patent/GB2520765A/en
Application filed filed Critical
Publication of JP2021006028A publication Critical patent/JP2021006028A/ja
Publication of JP2021006028A5 publication Critical patent/JP2021006028A5/ja
Application granted granted Critical
Publication of JP7091400B2 publication Critical patent/JP7091400B2/ja
Active legal-status Critical Current
Anticipated expiration legal-status Critical

Links

JP2020135592A 2013-12-02 2020-08-11 核酸の多重検出 Active JP7091400B2 (ja)

Applications Claiming Priority (2)

Application Number Priority Date Filing Date Title
GB1321196.6 2013-12-02
GB1321196.6A GB2520765A (en) 2013-12-02 2013-12-02 Multiplex detection of nucleic acids

Related Parent Applications (1)

Application Number Title Priority Date Filing Date
JP2016535001A Division JP6749236B2 (ja) 2013-12-02 2014-11-26 核酸の多重検出

Publications (3)

Publication Number Publication Date
JP2021006028A JP2021006028A (ja) 2021-01-21
JP2021006028A5 true JP2021006028A5 (https=) 2021-04-22
JP7091400B2 JP7091400B2 (ja) 2022-06-27

Family

ID=49979622

Family Applications (2)

Application Number Title Priority Date Filing Date
JP2016535001A Active JP6749236B2 (ja) 2013-12-02 2014-11-26 核酸の多重検出
JP2020135592A Active JP7091400B2 (ja) 2013-12-02 2020-08-11 核酸の多重検出

Family Applications Before (1)

Application Number Title Priority Date Filing Date
JP2016535001A Active JP6749236B2 (ja) 2013-12-02 2014-11-26 核酸の多重検出

Country Status (12)

Country Link
US (2) US10526643B2 (https=)
EP (2) EP3757228B1 (https=)
JP (2) JP6749236B2 (https=)
KR (2) KR102451174B1 (https=)
CN (1) CN105934523B (https=)
AU (1) AU2014358862B2 (https=)
BR (1) BR112016012319B1 (https=)
CA (1) CA2931015C (https=)
ES (2) ES2987069T3 (https=)
GB (1) GB2520765A (https=)
RU (1) RU2733887C2 (https=)
WO (1) WO2015083002A2 (https=)

Families Citing this family (68)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
EP3013983B1 (en) 2013-06-25 2023-02-15 Prognosys Biosciences, Inc. Spatially encoded biological assays using a microfluidic device
GB2520763A (en) 2013-12-02 2015-06-03 Vanadis Diagnostics Ab Nucleic acid probe and method of detecting genomic fragments
GB2520765A (en) 2013-12-02 2015-06-03 Vanadis Diagnostics Ab Multiplex detection of nucleic acids
KR102535489B1 (ko) 2014-06-13 2023-05-22 큐-리네아 에이비 미생물 검출 방법 및 특성 규명 방법
US10774374B2 (en) 2015-04-10 2020-09-15 Spatial Transcriptomics AB and Illumina, Inc. Spatially distinguished, multiplex nucleic acid analysis of biological specimens
GB201507026D0 (en) 2015-04-24 2015-06-10 Linea Ab Q Medical sample transportation container
GB201507376D0 (en) 2015-04-30 2015-06-17 Vanadis Diagnostics Ab Use of a porous transparent capillary membrane for counting rolling circle amplification products
KR102753113B1 (ko) 2015-09-18 2025-01-09 바나디스 다이아그노스틱스 Dna 샘플의 분석을 위한 프로브 세트 및 이의 사용 방법
GB2554767A (en) 2016-04-21 2018-04-11 Q Linea Ab Detecting and characterising a microorganism
CN110023505B (zh) 2016-10-27 2023-04-04 瓦纳迪斯诊断公司 用于处理滚环扩增产物的方法
GB201621514D0 (en) 2016-12-16 2017-02-01 Q-Linea Ab Padlock probe detection method
CN106929593B (zh) * 2017-04-27 2021-04-30 华侨大学 一种原位核酸检测方法
CN109252224A (zh) * 2017-07-14 2019-01-22 深圳华大基因股份有限公司 一种环状探针和基于环状探针捕获的测序文库构建方法
US11117128B2 (en) 2017-08-25 2021-09-14 Vanadis Diagnostics Ab Filtration device
WO2019195346A1 (en) 2018-04-02 2019-10-10 Progenity, Inc. Methods, systems, and compositions for counting nucleic acid molecules
US12203129B2 (en) * 2018-07-03 2025-01-21 ChromaCode, Inc. Formulations and signal encoding and decoding methods for massively multiplexed biochemical assays
US11519033B2 (en) 2018-08-28 2022-12-06 10X Genomics, Inc. Method for transposase-mediated spatial tagging and analyzing genomic DNA in a biological sample
US12497649B2 (en) 2018-12-05 2025-12-16 Qingdao MGI Tech Co., Ltd Rolling circle amplification method, method for preparing sequencing library, and DNA nanosphere prepared therefrom
EP3894590B1 (en) 2018-12-10 2025-10-22 10X Genomics, Inc. Methods of using master / copy arrays for spatial detection
US12529094B2 (en) 2018-12-10 2026-01-20 10X Genomics, Inc. Imaging system hardware
US11926867B2 (en) 2019-01-06 2024-03-12 10X Genomics, Inc. Generating capture probes for spatial analysis
US11649485B2 (en) 2019-01-06 2023-05-16 10X Genomics, Inc. Generating capture probes for spatial analysis
EP3947718A4 (en) 2019-04-02 2022-12-21 Enumera Molecular, Inc. METHODS, SYSTEMS AND COMPOSITIONS FOR COUNTING NUCLEIC ACID MOLECULES
EP3976820A1 (en) 2019-05-30 2022-04-06 10X Genomics, Inc. Methods of detecting spatial heterogeneity of a biological sample
US11639521B2 (en) * 2019-06-03 2023-05-02 The Chinese University Of Hong Kong Method for determining the copy number of a tandem repeat sequence
WO2021092433A2 (en) 2019-11-08 2021-05-14 10X Genomics, Inc. Enhancing specificity of analyte binding
WO2021133849A1 (en) 2019-12-23 2021-07-01 10X Genomics, Inc. Methods for spatial analysis using rna-templated ligation
CN115135984B (zh) 2019-12-23 2025-12-23 10X基因组学有限公司 可逆固定试剂及其使用方法
EP4081656A1 (en) 2019-12-23 2022-11-02 10X Genomics, Inc. Compositions and methods for using fixed biological samples in partition-based assays
US12365942B2 (en) 2020-01-13 2025-07-22 10X Genomics, Inc. Methods of decreasing background on a spatial array
US12405264B2 (en) 2020-01-17 2025-09-02 10X Genomics, Inc. Electrophoretic system and method for analyte capture
US11702693B2 (en) 2020-01-21 2023-07-18 10X Genomics, Inc. Methods for printing cells and generating arrays of barcoded cells
US11732299B2 (en) 2020-01-21 2023-08-22 10X Genomics, Inc. Spatial assays with perturbed cells
US20210230681A1 (en) 2020-01-24 2021-07-29 10X Genomics, Inc. Methods for spatial analysis using proximity ligation
US12076701B2 (en) 2020-01-31 2024-09-03 10X Genomics, Inc. Capturing oligonucleotides in spatial transcriptomics
US11898205B2 (en) 2020-02-03 2024-02-13 10X Genomics, Inc. Increasing capture efficiency of spatial assays
US12110541B2 (en) 2020-02-03 2024-10-08 10X Genomics, Inc. Methods for preparing high-resolution spatial arrays
US11732300B2 (en) 2020-02-05 2023-08-22 10X Genomics, Inc. Increasing efficiency of spatial analysis in a biological sample
WO2021158925A1 (en) 2020-02-07 2021-08-12 10X Genomics, Inc. Quantitative and automated permeabilization performance evaluation for spatial transcriptomics
US12281357B1 (en) 2020-02-14 2025-04-22 10X Genomics, Inc. In situ spatial barcoding
US11891654B2 (en) 2020-02-24 2024-02-06 10X Genomics, Inc. Methods of making gene expression libraries
ES2965354T3 (es) 2020-04-22 2024-04-12 10X Genomics Inc Métodos para análisis espacial que usan eliminación de ARN elegido como diana
EP4153775B1 (en) 2020-05-22 2024-07-24 10X Genomics, Inc. Simultaneous spatio-temporal measurement of gene expression and cellular activity
EP4553168A3 (en) 2020-05-22 2025-08-27 10x Genomics, Inc. Spatial analysis to detect sequence variants
US12031177B1 (en) 2020-06-04 2024-07-09 10X Genomics, Inc. Methods of enhancing spatial resolution of transcripts
WO2021252499A1 (en) 2020-06-08 2021-12-16 10X Genomics, Inc. Methods of determining a surgical margin and methods of use thereof
WO2021252733A2 (en) * 2020-06-10 2021-12-16 Bonadea Diagnostics, Llc Sequence conversion reaction
EP4172362B1 (en) 2020-06-25 2024-09-18 10X Genomics, Inc. Spatial analysis of dna methylation
US12209280B1 (en) 2020-07-06 2025-01-28 10X Genomics, Inc. Methods of identifying abundance and location of an analyte in a biological sample using second strand synthesis
US11761038B1 (en) 2020-07-06 2023-09-19 10X Genomics, Inc. Methods for identifying a location of an RNA in a biological sample
US11981960B1 (en) 2020-07-06 2024-05-14 10X Genomics, Inc. Spatial analysis utilizing degradable hydrogels
US11981958B1 (en) 2020-08-20 2024-05-14 10X Genomics, Inc. Methods for spatial analysis using DNA capture
CN116438454A (zh) 2020-09-21 2023-07-14 普罗根尼蒂公司 用于分离细胞游离dna的组合物和方法
US11926822B1 (en) 2020-09-23 2024-03-12 10X Genomics, Inc. Three-dimensional spatial analysis
US11827935B1 (en) 2020-11-19 2023-11-28 10X Genomics, Inc. Methods for spatial analysis using rolling circle amplification and detection probes
EP4697281A3 (en) 2020-12-11 2026-04-22 Enumera Molecular, Inc. Methods and systems for image processing
EP4729631A2 (en) 2020-12-21 2026-04-22 10X Genomics, Inc. Methods, compositions, and systems for capturing probes and/or barcodes
EP4428246B1 (en) 2021-04-14 2025-12-24 10X Genomics, Inc. Methods of measuring mislocalization of an analyte
EP4320271B1 (en) 2021-05-06 2025-03-19 10X Genomics, Inc. Methods for increasing resolution of spatial analysis
EP4582555A3 (en) 2021-06-03 2025-10-22 10X Genomics, Inc. Methods, compositions, kits, and systems for enhancing analyte capture for spatial analysis
EP4352252B1 (en) * 2021-07-13 2026-01-28 10X Genomics, Inc. Methods for spatial analysis using targeted probe silencing
ES3011462T3 (en) 2021-09-01 2025-04-07 10X Genomics Inc Methods for blocking a capture probe on a spatial array
CN113801923A (zh) * 2021-10-20 2021-12-17 南京鼓楼医院 一种可直接用于血清标志物检测的数字滚环扩增检测方法
WO2023086880A1 (en) 2021-11-10 2023-05-19 10X Genomics, Inc. Methods, compositions, and kits for determining the location of an analyte in a biological sample
EP4305195A2 (en) 2021-12-01 2024-01-17 10X Genomics, Inc. Methods, compositions, and systems for improved in situ detection of analytes and spatial analysis
WO2024102809A1 (en) 2022-11-09 2024-05-16 10X Genomics, Inc. Methods, compositions, and kits for determining the location of multiple analytes in a biological sample
CN116625999B (zh) * 2023-05-17 2023-11-28 中国科学院苏州生物医学工程技术研究所 一种评估零模波导孔有效载样的方法及其应用
WO2025194315A1 (zh) * 2024-03-18 2025-09-25 深圳华大智造科技股份有限公司 核酸检测方法及其应用

Family Cites Families (33)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
SE9400522D0 (sv) 1994-02-16 1994-02-16 Ulf Landegren Method and reagent for detecting specific nucleotide sequences
US5854033A (en) 1995-11-21 1998-12-29 Yale University Rolling circle replication reporter systems
EP1985714B1 (en) 1998-03-25 2012-02-29 Olink AB Method and kit for detecting a target molecule employing at least two affinity probes and rolling circle replication of padlock probes
WO2000004193A1 (en) * 1998-07-20 2000-01-27 Yale University Method for detecting nucleic acids using target-mediated ligation of bipartite primers
AU2001267191A1 (en) 2000-06-06 2001-12-17 Tm Bioscience Corporation Capture moieties for nucleic acids and uses thereof
DE60131903T2 (de) 2000-10-24 2008-11-27 The Board of Trustees of the Leland S. Stanford Junior University, Palo Alto Direkte multiplex charakterisierung von genomischer dna
GB2378245A (en) 2001-08-03 2003-02-05 Mats Nilsson Nucleic acid amplification method
AU2002366098A1 (en) 2001-11-19 2003-06-10 Parallele Bioscience Inc Multiplex pcr
WO2005005666A1 (en) * 2002-11-19 2005-01-20 Singulex, Inc. Detection of target molecules through interaction with probes
EP2204458A1 (en) 2003-11-04 2010-07-07 Applied Biosystems, LLC Concatameric ligation products: compositions, methods and kits for same
SE0401270D0 (sv) 2004-05-18 2004-05-18 Fredrik Dahl Method for amplifying specific nucleic acids in parallel
CA2614118C (en) * 2005-07-04 2013-11-26 Erasmus University Medical Center 4c
US20070087355A1 (en) * 2005-10-14 2007-04-19 Barrett Michael T Comparative genomic hybridization assays and compositions for practicing the same
US8038595B2 (en) 2006-01-25 2011-10-18 Beth Israel Deaconess Medical Center Devices and methods for tissue transplant and regeneration
WO2008033442A2 (en) 2006-09-12 2008-03-20 The Board Of Trustees Of The Leland Stanford Junior University Methods and compositions for performing low background multiplex nucleic acid amplification reactions
US20100291636A1 (en) 2007-06-11 2010-11-18 Olink Genomics Ab Method for introducing common and/or individual sequence elements in a target nucleic acid molecule
US20090061424A1 (en) 2007-08-30 2009-03-05 Sigma-Aldrich Company Universal ligation array for analyzing gene expression or genomic variations
GB0912909D0 (en) 2009-07-23 2009-08-26 Olink Genomics Ab Probes for specific analysis of nucleic acids
WO2011068909A2 (en) * 2009-12-01 2011-06-09 Brigham And Women's Hospital, Inc. Aptamer cell compositions
GB0921264D0 (en) 2009-12-03 2010-01-20 Olink Genomics Ab Method for amplification of target nucleic acid
US20140186827A1 (en) 2010-05-14 2014-07-03 Fluidigm, Inc. Assays for the detection of genotype, mutations, and/or aneuploidy
US20120034603A1 (en) * 2010-08-06 2012-02-09 Tandem Diagnostics, Inc. Ligation-based detection of genetic variants
US11270781B2 (en) * 2011-01-25 2022-03-08 Ariosa Diagnostics, Inc. Statistical analysis for non-invasive sex chromosome aneuploidy determination
GB2492042B (en) 2011-05-11 2020-04-15 Agilent Technologies Inc Selector probes for nucleic acid analysis comprising at each end a non-adjacent target specific region
WO2013079649A1 (en) 2011-12-02 2013-06-06 Qiagen Gmbh Method and kit for characterizing rna in a composition
WO2013109981A1 (en) 2012-01-20 2013-07-25 Sequenom, Inc. Diagnostic processes that factor experimental conditions
US9892230B2 (en) * 2012-03-08 2018-02-13 The Chinese University Of Hong Kong Size-based analysis of fetal or tumor DNA fraction in plasma
CN104640997B (zh) 2012-04-06 2017-12-19 香港中文大学 通过使用靶向大规模并行测序的等位基因比率分析进行的胎儿三体性的非侵入性产前诊断
EP2653559A1 (en) 2012-04-20 2013-10-23 Samsung Electronics Co., Ltd Polynucleotide and use thereof
JP2016513461A (ja) 2013-03-12 2016-05-16 カウンシル,インコーポレーテッド 出生前遺伝子分析システム及び方法
GB2520765A (en) 2013-12-02 2015-06-03 Vanadis Diagnostics Ab Multiplex detection of nucleic acids
GB2520763A (en) 2013-12-02 2015-06-03 Vanadis Diagnostics Ab Nucleic acid probe and method of detecting genomic fragments
US10174383B2 (en) * 2014-08-13 2019-01-08 Vanadis Diagnostics Method of estimating the amount of a methylated locus in a sample

Similar Documents

Publication Publication Date Title
JP2021006028A5 (https=)
AU2022271472B2 (en) Enzyme- and amplification-free sequencing
JPH10507357A5 (https=)
US20230183788A1 (en) Oligonucleotide Paints
Carvalho et al. High resolution microarray comparative genomic hybridisation analysis using spotted oligonucleotides
JP2016537989A5 (https=)
US20090221438A1 (en) Methods and systems for uniform enrichment of genomic regions
JP2005519634A5 (https=)
JP2004526402A5 (https=)
JP2014204730A5 (https=)
JP2020504709A5 (https=)
JP2015156872A5 (https=)
JP2013532494A5 (https=)
JP2005536229A5 (https=)
EP2017356A3 (en) Tagged oliggonucleotides and their use in nucleic acid amplification methods
ATE516371T1 (de) Oligonukleotide und deren verwendungen
US20150203907A1 (en) Genome capture and sequencing to determine genome-wide copy number variation
JP2011507488A5 (https=)
Masayesva et al. Gene expression alterations over large chromosomal regions in cancers include multiple genes unrelated to malignant progression
Myllykangas et al. Efficient targeted resequencing of human germline and cancer genomes by oligonucleotide-selective sequencing
JP2011505122A5 (https=)
CA2741630A1 (en) Suppression of secondary capture in microarray assays
JP2002509694A5 (https=)
JP2013529071A5 (https=)
JP2018518968A5 (https=)